ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast74a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197709.1| Oryza sativa (japonica cultivar-group) putative... 90 7e-15
2gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 geno... 90 7e-15
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 90 7e-15
5gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.39
6gb|AC182676.2| Populus trichocarpa clone Pop1-29E23, complete se... 42 1.5
7ref|XM_958020.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
8ref|XM_328557.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
10gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genom... 42 1.5
11emb|AL669968.10| Mouse DNA sequence from clone RP23-475F22 on ch... 42 1.5
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
14dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
16gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 6.1
17gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.1
18gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.1
19ref|XM_361917.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.1
20gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A mRNA,... 40 6.1
21ref|XM_713714.1| Candida albicans SC5314 putative COPII vesicle ... 40 6.1
22ref|XM_713631.1| Candida albicans SC5314 putative COPII vesicle ... 40 6.1
23gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase (Kor1... 40 6.1
24emb|Z69904.1|CEZK20 Caenorhabditis elegans Cosmid ZK20, complete... 40 6.1
25ref|XM_571387.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 6.1
26gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome... 40 6.1
27emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.1
28emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 40 6.1
29emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 40 6.1
30gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.1
31dbj|AB230832.1| Aspergillus oryzae cDNA, contig sequence: AoEST9019 40 6.1
32dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 6.1
33dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.1
34gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.1
35gb|AY056469.1| Petromyzon marinus homeobox protein hox4x mRNA, p... 40 6.1
36gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.1
37ref|NM_001026897.2| Caenorhabditis elegans DAF-12 Interacting Pr... 40 6.1
38ref|NM_064084.3| Caenorhabditis elegans DAF-12 Interacting Prote... 40 6.1
39ref|NM_064083.3| Caenorhabditis elegans DAF-12 Interacting Prote... 40 6.1
40ref|NM_182101.2| Caenorhabditis elegans DAF-12 Interacting Prote... 40 6.1
41dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
42gb|AC007886.7|AC007886 Drosophila melanogaster, chromosome 3R, r... 40 6.1
43gb|AY161023.1| Sciaenops ocellatus clone SOC 421 microsatellite ... 40 6.1
44ref|NM_001011493.1| Xenopus tropicalis hypothetical LOC496993 (L... 40 6.1
45dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
46gb|AY646856.2| Sapovirus NongKhai-24/Thailand, complete genome 40 6.1
47gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 11... 40 6.1
48gb|BC088882.1| Xenopus tropicalis hypothetical LOC496993, mRNA (... 40 6.1 
>ref|NM_197709.1| Oryza sativa (japonica cultivar-group) putative transcription
           factor (OSJNBa0010C11.4), mRNA
          Length = 1358

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 150 atggcgtcggagtgggaaatggccatgggcgtggagctcggcatgggaatgggatcgtac 209
           |||||||||||||||||||||||||||||||| || ||||||||||| ||| |  |||||
Sbjct: 195 atggcgtcggagtgggaaatggccatgggcgtcgacctcggcatggggatgagcacgtac 254

                    
Query: 210 cacaacgcc 218
           |||||||||
Sbjct: 255 cacaacgcc 263



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 360 ggcgcccacgacttcttccc 379
           ||||||||||||||||||||
Sbjct: 435 ggcgcccacgacttcttccc 454
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>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
             sequence
          Length = 147117

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                         
Query: 150   atggcgtcggagtgggaaatggccatgggcgtggagctcggcatgggaatgggatcgtac 209
             |||||||||||||||||||||||||||||||| || ||||||||||| ||| |  |||||
Sbjct: 99392 atggcgtcggagtgggaaatggccatgggcgtcgacctcggcatggggatgagcacgtac 99451

                      
Query: 210   cacaacgcc 218
             |||||||||
Sbjct: 99452 cacaacgcc 99460



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   ggcgcccacgacttcttccc 379
             ||||||||||||||||||||
Sbjct: 99632 ggcgcccacgacttcttccc 99651
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                            
Query: 150      atggcgtcggagtgggaaatggccatgggcgtggagctcggcatgggaatgggatcgtac 209
                |||||||||||||||||||||||||||||||| || ||||||||||| ||| |  |||||
Sbjct: 21424379 atggcgtcggagtgggaaatggccatgggcgtcgacctcggcatggggatgagcacgtac 21424438

                         
Query: 210      cacaacgcc 218
                |||||||||
Sbjct: 21424439 cacaacgcc 21424447



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 360      ggcgcccacgacttcttccc 379
                ||||||||||||||||||||
Sbjct: 21424619 ggcgcccacgacttcttccc 21424638
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                            
Query: 150      atggcgtcggagtgggaaatggccatgggcgtggagctcggcatgggaatgggatcgtac 209
                |||||||||||||||||||||||||||||||| || ||||||||||| ||| |  |||||
Sbjct: 21435642 atggcgtcggagtgggaaatggccatgggcgtcgacctcggcatggggatgagcacgtac 21435701

                         
Query: 210      cacaacgcc 218
                |||||||||
Sbjct: 21435702 cacaacgcc 21435710



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 360      ggcgcccacgacttcttccc 379
                ||||||||||||||||||||
Sbjct: 21435882 ggcgcccacgacttcttccc 21435901
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 407     ccaccagcacctcggcgccgcc 428
               ||||||||||||||||||||||
Sbjct: 1357006 ccaccagcacctcggcgccgcc 1356985
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>gb|AC182676.2| Populus trichocarpa clone Pop1-29E23, complete sequence
          Length = 62085

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 399   ctccaccaccaccagcacctc 419
             |||||||||||||||||||||
Sbjct: 10813 ctccaccaccaccagcacctc 10833
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>ref|XM_958020.1| Neurospora crassa OR74A hypothetical protein (NCU07852.1) partial
           mRNA
          Length = 552

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cagcacctcggcgccgccgtg 431
           |||||||||||||||||||||
Sbjct: 360 cagcacctcggcgccgccgtg 340
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>ref|XM_328557.1| Neurospora crassa OR74A hypothetical protein (NCU07852.1) partial
           mRNA
          Length = 552

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cagcacctcggcgccgccgtg 431
           |||||||||||||||||||||
Sbjct: 360 cagcacctcggcgccgccgtg 340
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 260      ctactccgcctccgcggctgc 280
                |||||||||||||||||||||
Sbjct: 25376172 ctactccgcctccgcggctgc 25376152
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>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete
             sequence
          Length = 152828

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   ctactccgcctccgcggctgc 280
             |||||||||||||||||||||
Sbjct: 67188 ctactccgcctccgcggctgc 67208
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>emb|AL669968.10| Mouse DNA sequence from clone RP23-475F22 on chromosome 11 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (Gapd)
             pseudogene, complete sequence
          Length = 167170

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 395   cggactccaccaccaccagcacctc 419
             |||||||||||||||||| ||||||
Sbjct: 74035 cggactccaccaccaccaccacctc 74059
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 407      ccaccagcacctcggcgccgccgtg 431
                |||||||||||| ||||||||||||
Sbjct: 11521508 ccaccagcacctaggcgccgccgtg 11521484
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 260      ctactccgcctccgcggctgc 280
                |||||||||||||||||||||
Sbjct: 25467481 ctactccgcctccgcggctgc 25467461
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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1120F06
          Length = 186712

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 407   ccaccagcacctcggcgccgccgtg 431
             |||||||||||| ||||||||||||
Sbjct: 85166 ccaccagcacctaggcgccgccgtg 85142
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>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0446G09
          Length = 146898

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 407    ccaccagcacctcggcgccgccgtg 431
              |||||||||||| ||||||||||||
Sbjct: 131028 ccaccagcacctaggcgccgccgtg 131004
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>gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-144f20, complete
             sequence
          Length = 132371

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   tccaccaccaccagcacctc 419
             ||||||||||||||||||||
Sbjct: 53957 tccaccaccaccagcacctc 53976



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   tccaccaccaccagcacctc 419
             ||||||||||||||||||||
Sbjct: 53438 tccaccaccaccagcacctc 53457



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   tccaccaccaccagcacctc 419
             ||||||||||||||||||||
Sbjct: 53192 tccaccaccaccagcacctc 53211
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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
               sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 59      tagctcgtactcgtactgga 78
               ||||||||||||||||||||
Sbjct: 1241416 tagctcgtactcgtactgga 1241435
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    cacaacgccgccaacgtcaa 229
              ||||||||||||||||||||
Sbjct: 135868 cacaacgccgccaacgtcaa 135849
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>ref|XM_361917.1| Magnaporthe grisea 70-15 hypothetical protein (MG04362.4) partial
           cds
          Length = 627

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 402 caccaccaccagcacctcggcgcc 425
           ||||||||||||||| ||||||||
Sbjct: 127 caccaccaccagcacgtcggcgcc 150
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>gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A mRNA, complete cds
          Length = 1860

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  ctccaccaccaccagcacct 418
            ||||||||||||||||||||
Sbjct: 1829 ctccaccaccaccagcacct 1848
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>ref|XM_713714.1| Candida albicans SC5314 putative COPII vesicle coat component
            (CaO19_6217), mRNA
          Length = 3798

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  ctccaccaccaccagcacct 418
            ||||||||||||||||||||
Sbjct: 3248 ctccaccaccaccagcacct 3267
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>ref|XM_713631.1| Candida albicans SC5314 putative COPII vesicle coat component
            (CaO19_13598), mRNA
          Length = 3798

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  ctccaccaccaccagcacct 418
            ||||||||||||||||||||
Sbjct: 3248 ctccaccaccaccagcacct 3267
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>gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase (Kor1) mRNA, complete cds
          Length = 2562

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  ctccaccaccaccagcacct 418
            ||||||||||||||||||||
Sbjct: 2091 ctccaccaccaccagcacct 2110
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>emb|Z69904.1|CEZK20 Caenorhabditis elegans Cosmid ZK20, complete sequence
          Length = 33490

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  tccaccaccaccagcacctc 419
            ||||||||||||||||||||
Sbjct: 4048 tccaccaccaccagcacctc 4029
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>ref|XM_571387.1| Cryptococcus neoformans var. neoformans JEC21 histone
            deacetylation-related protein (CNF04280) partial mRNA
          Length = 5149

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   tagctcgtactcgtactgga 78
            ||||||||||||||||||||
Sbjct: 4182 tagctcgtactcgtactgga 4163
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>gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome 18, complete sequence
          Length = 201282

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   ctccaccaccaccagcacct 418
             ||||||||||||||||||||
Sbjct: 42616 ctccaccaccaccagcacct 42597
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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    accagcacctcggcgccgcc 428
              ||||||||||||||||||||
Sbjct: 347877 accagcacctcggcgccgcc 347896
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    accagcacctcggcgccgcc 428
              ||||||||||||||||||||
Sbjct: 237062 accagcacctcggcgccgcc 237043
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>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    accagcacctcggcgccgcc 428
              ||||||||||||||||||||
Sbjct: 262760 accagcacctcggcgccgcc 262741
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 411    cagcacctcggcgccgccgtgggc 434
              |||||||||||||||||| |||||
Sbjct: 193554 cagcacctcggcgccgccctgggc 193531
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>dbj|AB230832.1| Aspergillus oryzae cDNA, contig sequence: AoEST9019
          Length = 850

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 cgggatgcagcccatgcgcg 312
           ||||||||||||||||||||
Sbjct: 697 cgggatgcagcccatgcgcg 716
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    cgggatgcagcccatgcgcg 312
              ||||||||||||||||||||
Sbjct: 548493 cgggatgcagcccatgcgcg 548474
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 405    caccaccagcacctcggcgccgcc 428
              ||||||| ||||||||||||||||
Sbjct: 791154 caccaccggcacctcggcgccgcc 791131
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 131     cgctcttctggggcgtggaa 150
               ||||||||||||||||||||
Sbjct: 2014473 cgctcttctggggcgtggaa 2014492
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>gb|AY056469.1| Petromyzon marinus homeobox protein hox4x mRNA, partial cds
          Length = 1146

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 401 ccaccaccaccagcacctcg 420
           ||||||||||||||||||||
Sbjct: 102 ccaccaccaccagcacctcg 121
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 407     ccaccagcacctcggcgccg 426
               ||||||||||||||||||||
Sbjct: 2580124 ccaccagcacctcggcgccg 2580105
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>ref|NM_001026897.2| Caenorhabditis elegans DAF-12 Interacting Protein family member
            (din-1) (din-1) mRNA, complete cds
          Length = 6751

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 400  tccaccaccaccagcacctc 419
            ||||||||||||||||||||
Sbjct: 3325 tccaccaccaccagcacctc 3344
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>ref|NM_064084.3| Caenorhabditis elegans DAF-12 Interacting Protein family member
            (din-1) (din-1) mRNA, complete cds
          Length = 7247

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 400  tccaccaccaccagcacctc 419
            ||||||||||||||||||||
Sbjct: 3821 tccaccaccaccagcacctc 3840
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>ref|NM_064083.3| Caenorhabditis elegans DAF-12 Interacting Protein family member
            (din-1) (din-1) mRNA, complete cds
          Length = 6659

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 400  tccaccaccaccagcacctc 419
            ||||||||||||||||||||
Sbjct: 3821 tccaccaccaccagcacctc 3840
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>ref|NM_182101.2| Caenorhabditis elegans DAF-12 Interacting Protein family member
            (din-1) (din-1) mRNA, complete cds
          Length = 7629

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 400  tccaccaccaccagcacctc 419
            ||||||||||||||||||||
Sbjct: 3753 tccaccaccaccagcacctc 3772
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 215      cgccgccaacgtcaacgccgcgcccatg 242
                ||||||||||| ||||||||||| ||||
Sbjct: 29820475 cgccgccaacgccaacgccgcgctcatg 29820448
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>gb|AC007886.7|AC007886 Drosophila melanogaster, chromosome 3R, region 99D-99D, BAC clone
              BACR07A18, complete sequence
          Length = 168469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    tggagctcggcatgggaatg 200
              ||||||||||||||||||||
Sbjct: 129942 tggagctcggcatgggaatg 129961
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>gb|AY161023.1| Sciaenops ocellatus clone SOC 421 microsatellite sequence
          Length = 607

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 393 aacggactccaccaccaccagcac 416
           ||||| ||||||||||||||||||
Sbjct: 483 aacggcctccaccaccaccagcac 506
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>ref|NM_001011493.1| Xenopus tropicalis hypothetical LOC496993 (LOC496993), mRNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 393 aacggactccaccaccaccagcac 416
           ||||||||||| ||||||||||||
Sbjct: 642 aacggactccatcaccaccagcac 619
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>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0481E08
          Length = 171965

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 215   cgccgccaacgtcaacgccgcgcccatg 242
             ||||||||||| ||||||||||| ||||
Sbjct: 15988 cgccgccaacgccaacgccgcgctcatg 15961
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>gb|AY646856.2| Sapovirus NongKhai-24/Thailand, complete genome
          Length = 7500

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 173  catgggcgtggagctcggcatggg 196
            ||||||||||||||||| ||||||
Sbjct: 2865 catgggcgtggagctcgtcatggg 2888
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>gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 110 of 118 of the
             complete sequence
          Length = 228443

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   tggagctcggcatgggaatg 200
             ||||||||||||||||||||
Sbjct: 43510 tggagctcggcatgggaatg 43529
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>gb|BC088882.1| Xenopus tropicalis hypothetical LOC496993, mRNA (cDNA clone
           MGC:108052 IMAGE:7003349), complete cds
          Length = 1005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 393 aacggactccaccaccaccagcac 416
           ||||||||||| ||||||||||||
Sbjct: 642 aacggactccatcaccaccagcac 619


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,351,769
Number of Sequences: 3902068
Number of extensions: 3351769
Number of successful extensions: 80538
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79238
Number of HSP's gapped (non-prelim): 1300
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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