ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast74a03 |
|---|---|
| Clone Library Name | barley_pub |
>STAD_ORYSA (Q40731) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 390 Score = 50.8 bits (120), Expect = 2e-06 Identities = 28/79 (35%), Positives = 35/79 (44%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFLXXXXXXXXXXXXXXXXXFMEXXX 421 +P ++ E+ SL W EN+L LL PVE SWQP DFL F + Sbjct: 59 LPPQKREIFDSLQPWAKENLLNLLKPVEKSWQPQDFL----------PDPSSDGFYDEVK 108 Query: 422 XXXXXXXXXPDEVLVCLVG 478 PD+ VCLVG Sbjct: 109 ELRERAKEIPDDYFVCLVG 127
>STAD_SIMCH (Q01753) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 398 Score = 50.4 bits (119), Expect = 2e-06 Identities = 29/79 (36%), Positives = 36/79 (45%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFLXXXXXXXXXXXXXXXXXFMEXXX 421 +P ++ E+ +SL GW EN+L L PVE WQP DFL FM+ Sbjct: 67 MPPQKIEIFKSLEGWAEENVLVHLKPVEKCWQPQDFL----------PDPASEGFMDQVK 116 Query: 422 XXXXXXXXXPDEVLVCLVG 478 PDE LV LVG Sbjct: 117 ELRERTKEIPDEYLVVLVG 135
>STAD_SPIOL (P28645) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 399 Score = 47.4 bits (111), Expect = 2e-05 Identities = 19/37 (51%), Positives = 26/37 (70%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 352 +P+E+ E+ +SL GW EN+L L PVE WQP D+L Sbjct: 68 MPQEKIEIFKSLEGWAEENLLVHLKPVEKCWQPQDYL 104
>STAD_SOYBN (Q42807) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 411 Score = 45.4 bits (106), Expect = 8e-05 Identities = 27/79 (34%), Positives = 33/79 (41%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFLXXXXXXXXXXXXXXXXXFMEXXX 421 +P ++ E+ QSL W EN+L L PVE WQP DFL F E Sbjct: 60 MPPQKIEIFQSLEDWAEENILAHLKPVEKCWQPQDFL----------PDPSSDGFEEQVK 109 Query: 422 XXXXXXXXXPDEVLVCLVG 478 PD+ V LVG Sbjct: 110 ELRERAKELPDDYFVVLVG 128
>STAD_CUCSA (P32061) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 396 Score = 45.1 bits (105), Expect = 1e-04 Identities = 27/79 (34%), Positives = 33/79 (41%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFLXXXXXXXXXXXXXXXXXFMEXXX 421 +P ++ E+ +SL W EN+L L PVE WQP DFL F E Sbjct: 65 MPPQKMEIFKSLEDWAEENLLVHLKPVERCWQPQDFL----------PDSAFEGFHEQVR 114 Query: 422 XXXXXXXXXPDEVLVCLVG 478 PDE V LVG Sbjct: 115 ELRERAKELPDEYFVVLVG 133
>STAD_SOLTU (P46253) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 393 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/37 (51%), Positives = 24/37 (64%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 352 +P E+ E+ SL W A+N+L L PVE WQP DFL Sbjct: 62 MPPEKIEVFDSLRDWAAQNLLVHLKPVEKCWQPTDFL 98
>STAD_RICCO (P22337) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) Length = 396 Score = 43.9 bits (102), Expect = 2e-04 Identities = 18/37 (48%), Positives = 25/37 (67%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 352 +P ++ E+ +SL+ W EN+L L PVE WQP DFL Sbjct: 65 MPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFL 101
>STAD_HELAN (Q96456) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 396 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/79 (31%), Positives = 33/79 (41%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFLXXXXXXXXXXXXXXXXXFMEXXX 421 +P ++ E+ +S+ GW N+L L PVE WQ DFL FME Sbjct: 65 MPPQKIEIFKSMEGWAENNILVHLKPVEKCWQAQDFL----------PDPASDGFMEQVE 114 Query: 422 XXXXXXXXXPDEVLVCLVG 478 PD+ V LVG Sbjct: 115 ELRARAKEIPDDYFVVLVG 133
>STAD_ELAGV (O24428) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 393 Score = 43.5 bits (101), Expect = 3e-04 Identities = 26/79 (32%), Positives = 32/79 (40%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFLXXXXXXXXXXXXXXXXXFMEXXX 421 +P ++ E+ +SL W N+L L PVE WQP DFL F E Sbjct: 62 MPPQKIEIFKSLEDWAENNILVHLKPVEKCWQPQDFL----------PDPSSEGFHEEVK 111 Query: 422 XXXXXXXXXPDEVLVCLVG 478 PD VCLVG Sbjct: 112 ELRERSKEIPDGYYVCLVG 130
>STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 397 Score = 42.7 bits (99), Expect = 5e-04 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 352 +P + E+ +SL GW N+L L PVE WQP DFL Sbjct: 65 MPPHKIEIFKSLEGWAENNILTHLKPVEKCWQPADFL 101
>STAD_OLEEU (Q43593) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 390 Score = 42.4 bits (98), Expect = 7e-04 Identities = 18/34 (52%), Positives = 22/34 (64%) Frame = +2 Query: 251 EQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 352 E+ E+ SLN W EN+L LL V+ WQP DFL Sbjct: 62 EKREIFNSLNNWAQENILVLLKDVDKCWQPSDFL 95
>STAD_SOLCO (Q41319) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 393 Score = 41.2 bits (95), Expect = 0.001 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 352 +P E+ E+ SL+GW N+L L PVE WQ DFL Sbjct: 62 MPPEKREIFDSLHGWADNNILVHLKPVEKCWQASDFL 98
>STAD_BRANA (P29108) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 398 Score = 41.2 bits (95), Expect = 0.001 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 352 +P ++ E+ +S+ W +N+L L VE SWQP DFL Sbjct: 67 MPPQKIEIFKSMEDWAEQNLLTQLKDVEKSWQPQDFL 103
>STAD_CARTI (P22243) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 396 Score = 41.2 bits (95), Expect = 0.001 Identities = 24/79 (30%), Positives = 33/79 (41%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFLXXXXXXXXXXXXXXXXXFMEXXX 421 +P ++ E+ +S+ GW +N+L L PVE WQ DFL F E Sbjct: 65 MPPQKIEIFKSIEGWAEQNILVHLKPVEKCWQAQDFL----------PDPASEGFDEQVK 114 Query: 422 XXXXXXXXXPDEVLVCLVG 478 PD+ V LVG Sbjct: 115 ELRARAKEIPDDYFVVLVG 133
>STAD_CORSA (P32063) Omega-12 acyl-[acyl-carrier-protein] desaturase,| chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 385 Score = 40.8 bits (94), Expect = 0.002 Identities = 25/76 (32%), Positives = 31/76 (40%) Frame = +2 Query: 251 EQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFLXXXXXXXXXXXXXXXXXFMEXXXXXX 430 E E+ SL GW +N+L L VE+SWQP D+L F + Sbjct: 56 EVDELFNSLEGWARDNILVHLKSVENSWQPQDYL----------PDPTSDAFEDQVKEMR 105 Query: 431 XXXXXXPDEVLVCLVG 478 PDE V LVG Sbjct: 106 ERAKDIPDEYFVVLVG 121
>STADS_BRANA (Q01771) Acyl-[acyl-carrier-protein] desaturase, seed specific,| chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 399 Score = 38.5 bits (88), Expect = 0.010 Identities = 16/37 (43%), Positives = 24/37 (64%) Frame = +2 Query: 242 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 352 +P ++ E+ +S+ +N+LP L VE SWQP DFL Sbjct: 68 MPPQKIEIFKSMEDRAEQNLLPHLKDVEKSWQPQDFL 104
>VIE2_HCMVA (P19893) 45 kDa immediate-early protein 2 (IE2) (UL122 protein)| Length = 580 Score = 30.8 bits (68), Expect = 2.0 Identities = 26/90 (28%), Positives = 33/90 (36%) Frame = -2 Query: 330 EDSTGLSSGSMFSATQPFSDCTISACSRGTGANPTSMXXXXXXXXXXXXXXXXXXXLHPE 151 EDS+ SS S SA+ S+ CS G GA+ TS H Sbjct: 256 EDSSSSSSSSCSSASDSESESEEMKCSSGGGASVTS-SHHGRGGFGGAASSSLLSCGHQS 314 Query: 150 FAGRSIHPRRVALPEPASLLLEKKKQIFAD 61 G S PR+ + L EK + I D Sbjct: 315 SGGASTGPRKKKSKRISELDNEKVRNIMKD 344
>GRPE2_PONPY (Q5R435) GrpE protein homolog 2, mitochondrial precursor| (Mt-GrpE#2) Length = 225 Score = 30.0 bits (66), Expect = 3.4 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -1 Query: 166 QTASRVCRTEHPPEARGPPRARVAL 92 +TA CR+E PP+ GPP A AL Sbjct: 38 RTAGEDCRSEDPPDELGPPLAERAL 62
>GRPE2_HUMAN (Q8TAA5) GrpE protein homolog 2, mitochondrial precursor| (Mt-GrpE#2) Length = 225 Score = 30.0 bits (66), Expect = 3.4 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -1 Query: 166 QTASRVCRTEHPPEARGPPRARVAL 92 +TA CR+E PP+ GPP A AL Sbjct: 38 RTAGEDCRSEDPPDELGPPLAERAL 62
>PHY_ADICA (P42496) Phytochrome 1| Length = 1118 Score = 28.9 bits (63), Expect = 7.6 Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 3/74 (4%) Frame = -2 Query: 336 CHEDSTGLSSGSMFSATQPFSDCTISACSRGTGANPTSMXXXXXXXXXXXXXXXXXXXLH 157 CH+DSTGLS+ S+ P + C A A T+ H Sbjct: 467 CHKDSTGLSTDSLAKTGYPEASCLGDAVCGLAAAKITATDFLFWFRSHTAKEVRWGGARH 526 Query: 156 -PEFA--GRSIHPR 124 PE GR +HPR Sbjct: 527 DPEERDDGRRMHPR 540
>Y1699_PYRHO (O59362) UPF0095 protein PH1699| Length = 447 Score = 28.5 bits (62), Expect = 9.9 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -2 Query: 111 PEPASLLLEKKKQIFADVHAAGPVFAID 28 P+P +LLL++ K I A+VH + AI+ Sbjct: 368 PDPVALLLDENKNIIAEVHTRDLLNAIE 395 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.135 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,290,057 Number of Sequences: 219361 Number of extensions: 657952 Number of successful extensions: 2145 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2069 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2141 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
