ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast73h10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 226 bits (114), Expect = 4e-56 Identities = 153/166 (92%) Strand = Plus / Minus Query: 77 gcgccggtcgacgcgctcttcctccagaacctgatgagccgcgtccagctccgcccgccc 136 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 9492923 gcgccggtggacgcgctgttcctccagaacctgatgagccgggtccagctccgcccgccc 9492864 Query: 137 ttcctcgacaccaactccttcctcacccaggacctcgacgacttcctcctcaacgagatc 196 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 9492863 ttcctcgacaccaactccttcctcacccaggacctcgacgagttcctcctcaacgagttc 9492804 Query: 197 gccgcgctctccgccgcggcgggcgagtccgacgacgatgacgacg 242 |||||||| || ||||| ||||| | |||||||| || ||||||| Sbjct: 9492803 gccgcgctgtcggccgccgcgggggcctccgacgatgacgacgacg 9492758 Score = 65.9 bits (33), Expect = 9e-08 Identities = 71/84 (84%) Strand = Plus / Minus Query: 286 ctccgcggaggccaggcggcgccggatgctctcgcgggaggagaccaagctggagaagga 345 ||||| |||||| |||||||| |||| ||| || |||||||| |||||||||||||||| Sbjct: 9492717 ctccggggaggcgaggcggcggcggacgctggcgagggaggaggccaagctggagaagga 9492658 Query: 346 gatcgncaggatggtgctcgccgg 369 ||||| || | ||||||||||| Sbjct: 9492657 gatcgtgcggctcgtgctcgccgg 9492634 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 230 gacgatgacgacgaccaagaagaag 254 ||||||||||||||| ||||||||| Sbjct: 17560605 gacgatgacgacgacgaagaagaag 17560581 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 cgagatcgccgcgctctccgccgc 213 |||||||||||||||| ||||||| Sbjct: 28825913 cgagatcgccgcgctcaccgccgc 28825890 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cgcccctccgccgccgctcc 69 |||||||||||||||||||| Sbjct: 3300339 cgcccctccgccgccgctcc 3300358
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 226 bits (114), Expect = 4e-56 Identities = 153/166 (92%) Strand = Plus / Minus Query: 77 gcgccggtcgacgcgctcttcctccagaacctgatgagccgcgtccagctccgcccgccc 136 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 9491044 gcgccggtggacgcgctgttcctccagaacctgatgagccgggtccagctccgcccgccc 9490985 Query: 137 ttcctcgacaccaactccttcctcacccaggacctcgacgacttcctcctcaacgagatc 196 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 9490984 ttcctcgacaccaactccttcctcacccaggacctcgacgagttcctcctcaacgagttc 9490925 Query: 197 gccgcgctctccgccgcggcgggcgagtccgacgacgatgacgacg 242 |||||||| || ||||| ||||| | |||||||| || ||||||| Sbjct: 9490924 gccgcgctgtcggccgccgcgggggcctccgacgatgacgacgacg 9490879 Score = 65.9 bits (33), Expect = 9e-08 Identities = 71/84 (84%) Strand = Plus / Minus Query: 286 ctccgcggaggccaggcggcgccggatgctctcgcgggaggagaccaagctggagaagga 345 ||||| |||||| |||||||| |||| ||| || |||||||| |||||||||||||||| Sbjct: 9490838 ctccggggaggcgaggcggcggcggacgctggcgagggaggaggccaagctggagaagga 9490779 Query: 346 gatcgncaggatggtgctcgccgg 369 ||||| || | ||||||||||| Sbjct: 9490778 gatcgtgcggctcgtgctcgccgg 9490755 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 230 gacgatgacgacgaccaagaagaag 254 ||||||||||||||| ||||||||| Sbjct: 17554146 gacgatgacgacgacgaagaagaag 17554122 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 cgagatcgccgcgctctccgccgc 213 |||||||||||||||| ||||||| Sbjct: 28917237 cgagatcgccgcgctcaccgccgc 28917214 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cgcccctccgccgccgctcc 69 |||||||||||||||||||| Sbjct: 3300450 cgcccctccgccgccgctcc 3300469
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009C19, from chromosome 3, complete sequence Length = 131709 Score = 226 bits (114), Expect = 4e-56 Identities = 153/166 (92%) Strand = Plus / Plus Query: 77 gcgccggtcgacgcgctcttcctccagaacctgatgagccgcgtccagctccgcccgccc 136 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 119763 gcgccggtggacgcgctgttcctccagaacctgatgagccgggtccagctccgcccgccc 119822 Query: 137 ttcctcgacaccaactccttcctcacccaggacctcgacgacttcctcctcaacgagatc 196 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 119823 ttcctcgacaccaactccttcctcacccaggacctcgacgagttcctcctcaacgagttc 119882 Query: 197 gccgcgctctccgccgcggcgggcgagtccgacgacgatgacgacg 242 |||||||| || ||||| ||||| | |||||||| || ||||||| Sbjct: 119883 gccgcgctgtcggccgccgcgggggcctccgacgatgacgacgacg 119928 Score = 65.9 bits (33), Expect = 9e-08 Identities = 71/84 (84%) Strand = Plus / Plus Query: 286 ctccgcggaggccaggcggcgccggatgctctcgcgggaggagaccaagctggagaagga 345 ||||| |||||| |||||||| |||| ||| || |||||||| |||||||||||||||| Sbjct: 119969 ctccggggaggcgaggcggcggcggacgctggcgagggaggaggccaagctggagaagga 120028 Query: 346 gatcgncaggatggtgctcgccgg 369 ||||| || | ||||||||||| Sbjct: 120029 gatcgtgcggctcgtgctcgccgg 120052
>dbj|AK103191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121O10, full insert sequence Length = 1065 Score = 226 bits (114), Expect = 4e-56 Identities = 153/166 (92%) Strand = Plus / Plus Query: 77 gcgccggtcgacgcgctcttcctccagaacctgatgagccgcgtccagctccgcccgccc 136 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 173 gcgccggtggacgcgctgttcctccagaacctgatgagccgggtccagctccgcccgccc 232 Query: 137 ttcctcgacaccaactccttcctcacccaggacctcgacgacttcctcctcaacgagatc 196 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 233 ttcctcgacaccaactccttcctcacccaggacctcgacgagttcctcctcaacgagttc 292 Query: 197 gccgcgctctccgccgcggcgggcgagtccgacgacgatgacgacg 242 |||||||| || ||||| ||||| | |||||||| || ||||||| Sbjct: 293 gccgcgctgtcggccgccgcgggggcctccgacgatgacgacgacg 338 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 286 ctccgcggaggccaggcggcgccggatgctctcgcgggaggagaccaagctggagaagga 345 ||||| |||||| |||||||| |||| ||| || |||||||| ||||||||||| |||| Sbjct: 379 ctccggggaggcgaggcggcggcggacgctggcgagggaggaggccaagctggagcagga 438 Query: 346 gatcg 350 ||||| Sbjct: 439 gatcg 443
>dbj|AK071043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079J04, full insert sequence Length = 999 Score = 226 bits (114), Expect = 4e-56 Identities = 153/166 (92%) Strand = Plus / Plus Query: 77 gcgccggtcgacgcgctcttcctccagaacctgatgagccgcgtccagctccgcccgccc 136 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107 gcgccggtggacgcgctgttcctccagaacctgatgagccgggtccagctccgcccgccc 166 Query: 137 ttcctcgacaccaactccttcctcacccaggacctcgacgacttcctcctcaacgagatc 196 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 167 ttcctcgacaccaactccttcctcacccaggacctcgacgagttcctcctcaacgagttc 226 Query: 197 gccgcgctctccgccgcggcgggcgagtccgacgacgatgacgacg 242 |||||||| || ||||| ||||| | |||||||| || ||||||| Sbjct: 227 gccgcgctgtcggccgccgcgggggcctccgacgatgacgacgacg 272 Score = 65.9 bits (33), Expect = 9e-08 Identities = 71/84 (84%) Strand = Plus / Plus Query: 286 ctccgcggaggccaggcggcgccggatgctctcgcgggaggagaccaagctggagaagga 345 ||||| |||||| |||||||| |||| ||| || |||||||| |||||||||||||||| Sbjct: 313 ctccggggaggcgaggcggcggcggacgctggcgagggaggaggccaagctggagaagga 372 Query: 346 gatcgncaggatggtgctcgccgg 369 ||||| || | ||||||||||| Sbjct: 373 gatcgtgcggctcgtgctcgccgg 396
>dbj|AK061080.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-F02, full insert sequence Length = 1119 Score = 226 bits (114), Expect = 4e-56 Identities = 153/166 (92%) Strand = Plus / Plus Query: 77 gcgccggtcgacgcgctcttcctccagaacctgatgagccgcgtccagctccgcccgccc 136 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 98 gcgccggtggacgcgctgttcctccagaacctgatgagccgggtccagctccgcccgccc 157 Query: 137 ttcctcgacaccaactccttcctcacccaggacctcgacgacttcctcctcaacgagatc 196 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 158 ttcctcgacaccaactccttcctcacccaggacctcgacgagttcctcctcaacgagttc 217 Query: 197 gccgcgctctccgccgcggcgggcgagtccgacgacgatgacgacg 242 |||||||| || ||||| ||||| | |||||||| || ||||||| Sbjct: 218 gccgcgctgtcggccgccgcgggggcctccgacgatgacgacgacg 263 Score = 65.9 bits (33), Expect = 9e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 286 ctccgcggaggccaggcggcgccggatgctctcgcgggaggagaccaagctggagaagga 345 ||||| |||||| |||||||| |||| ||| || |||||||| |||||||||||||||| Sbjct: 304 ctccggggaggcgaggcggcggcggacgctggcgagggaggaggccaagctggagaagga 363 Query: 346 gatcg 350 ||||| Sbjct: 364 gatcg 368
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaaggggagga 261 |||| |||| ||||||||| |||||||||||||||| Sbjct: 99481 cgacaacgacgacgacgacgaagaagaaggggagga 99516
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaaggggagga 261 |||| |||| ||||||||| |||||||||||||||| Sbjct: 4383 cgacaacgacgacgacgacgaagaagaaggggagga 4418
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 227 gacgacgatgacgacgaccaagaagaag 254 |||||||| ||||||||||||||||||| Sbjct: 1194547 gacgacgacgacgacgaccaagaagaag 1194520
>gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, complete sequence Length = 145526 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 227 gacgacgatgacgacgaccaagaagaag 254 |||||||| ||||||||||||||||||| Sbjct: 78785 gacgacgacgacgacgaccaagaagaag 78758
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 227 gacgacgatgacgacgaccaagaagaag 254 |||||||| ||||||||||||||||||| Sbjct: 1194547 gacgacgacgacgacgaccaagaagaag 1194520 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 cgacttcctcctcaacgagatcgccgc 201 |||||||||||||||||||||| |||| Sbjct: 13073853 cgacttcctcctcaacgagatctccgc 13073827 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 9335598 ccctccgccgccgctccctccg 9335619 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 9329828 ccctccgccgccgctccctccg 9329849
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaaggggagga 261 |||| |||| ||||||||| |||||||||||||||| Sbjct: 24817498 cgacaacgacgacgacgacgaagaagaaggggagga 24817533 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacca 246 ||||||||||||||||||||| Sbjct: 27001900 cgacgacgatgacgacgacca 27001880 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaa 250 ||||||||| ||||||||||||||| Sbjct: 14944808 cgacgacgacgacgacgaccaagaa 14944832 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccgcgcccctccgccgccgct 67 ||||||||||||||||||||| Sbjct: 12337944 ccgcgcccctccgccgccgct 12337924 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ggggagggctccgcggaggc 297 |||||||||||||||||||| Sbjct: 19346536 ggggagggctccgcggaggc 19346517 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 15691758 cgacgacgatgacgacgacc 15691777 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 15583514 cgacgacgatgacgacgacc 15583495
>dbj|AK108086.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-H08, full insert sequence Length = 600 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 227 gacgacgatgacgacgaccaagaagaag 254 |||||||| ||||||||||||||||||| Sbjct: 335 gacgacgacgacgacgaccaagaagaag 308
>gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086B08, complete sequence Length = 148274 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaaggggagga 261 |||| |||| ||||||||| |||||||||||||||| Sbjct: 143997 cgacaacgacgacgacgacgaagaagaaggggagga 144032
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 227 gacgacgatgacgacgaccaagaagaag 254 |||||||| ||||||||||||||||||| Sbjct: 1194544 gacgacgacgacgacgaccaagaagaag 1194517 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 cgacttcctcctcaacgagatcgccgc 201 |||||||||||||||||||||| |||| Sbjct: 13081193 cgacttcctcctcaacgagatctccgc 13081167 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 9340737 ccctccgccgccgctccctccg 9340758 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 9334967 ccctccgccgccgctccctccg 9334988
>ref|XR_002169.1| PREDICTED: Mus musculus hypothetical protein LOC668365 (LOC668365), mRNA Length = 385 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaaga 252 ||||||||||||||||||| ||||||| Sbjct: 69 cgacgacgatgacgacgacgaagaaga 95
>gb|AC124507.4| Mus musculus BAC clone RP23-430B14 from chromosome 7, complete sequence Length = 204278 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 279 gggagggctccgcggaggccagg 301 ||||||||||||||||||||||| Sbjct: 49076 gggagggctccgcggaggccagg 49098
>gb|AC124472.4| Mus musculus BAC clone RP24-83E15 from chromosome 7, complete sequence Length = 204477 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaaga 252 ||||||||||||||||||| ||||||| Sbjct: 100414 cgacgacgatgacgacgacgaagaaga 100440
>gb|AC122417.4| Mus musculus BAC clone RP24-159C12 from chromosome 7, complete sequence Length = 188555 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 279 gggagggctccgcggaggccagg 301 ||||||||||||||||||||||| Sbjct: 138997 gggagggctccgcggaggccagg 139019
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0044A10, from chromosome 10, complete sequence Length = 169270 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 175 cgacttcctcctcaacgagatcgccgc 201 |||||||||||||||||||||| |||| Sbjct: 29372 cgacttcctcctcaacgagatctccgc 29346
>dbj|AK140121.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230307J03 product:hypothetical protein, full insert sequence Length = 1832 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 279 gggagggctccgcggaggccagg 301 ||||||||||||||||||||||| Sbjct: 141 gggagggctccgcggaggccagg 119
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 175 cgacttcctcctcaacgagatcgccgc 201 |||||||||||||||||||||| |||| Sbjct: 21123169 cgacttcctcctcaacgagatctccgc 21123195 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tccgacgacgatgacgacgac 244 ||||||||||||||||||||| Sbjct: 3985409 tccgacgacgatgacgacgac 3985389
>ref|NM_001033040.1| Mus musculus gene model 166, (NCBI) (Gm166), mRNA Length = 1832 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 279 gggagggctccgcggaggccagg 301 ||||||||||||||||||||||| Sbjct: 141 gggagggctccgcggaggccagg 119
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 175 cgacttcctcctcaacgagatcgccgc 201 |||||||||||||||||||||| |||| Sbjct: 21049378 cgacttcctcctcaacgagatctccgc 21049404 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tccgacgacgatgacgacgac 244 ||||||||||||||||||||| Sbjct: 3985391 tccgacgacgatgacgacgac 3985371
>emb|AL713950.4|CNS07YPT Oryza sativa chromosome 12, . BAC OJ1004_F11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103307 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 175 cgacttcctcctcaacgagatcgccgc 201 |||||||||||||||||||||| |||| Sbjct: 39657 cgacttcctcctcaacgagatctccgc 39683
>ref|XM_450542.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3092 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 ccctccctcgccgcgcccctccgccgccgc 66 |||| |||||||||||||| |||||||||| Sbjct: 81 ccctacctcgccgcgccccgccgccgccgc 110
>ref|NM_195837.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0015I18.8), mRNA Length = 1665 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 908 ccctccgccgccgctccctccg 887
>ref|NM_195836.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0015I18.9), mRNA Length = 1320 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 434 ccctccgccgccgctccctccg 413
>ref|XM_477052.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2250 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 cgccgcgcccctccgccgccgc 66 |||||||||||||||||||||| Sbjct: 206 cgccgcgcccctccgccgccgc 227
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 236 gacgacgaccaagaagaaggggagga 261 |||||||| ||||||||||||||||| Sbjct: 435545 gacgacgaacaagaagaaggggagga 435570
>ref|XM_717408.1| Candida albicans SC5314 putative Ssn2p-like RNA polymerase II transcription factor (CaO19_1451), mRNA Length = 4998 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 232 cgatgacgacgaccaagaagaaggggagga 261 |||||||||||| |||||||||||||||| Sbjct: 2094 cgatgacgacgaagaagaagaaggggagga 2123
>ref|XM_717269.1| Candida albicans SC5314 putative Ssn2p-like RNA polymerase II transcription factor (CaO19_9026), mRNA Length = 4998 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 232 cgatgacgacgaccaagaagaaggggagga 261 |||||||||||| |||||||||||||||| Sbjct: 2094 cgatgacgacgaagaagaagaaggggagga 2123
>ref|XM_756775.1| Ustilago maydis 521 hypothetical protein (UM05721.1) partial mRNA Length = 3720 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 227 gacgacgatgacgacgaccaagaaga 252 |||||||||||||||||| ||||||| Sbjct: 1717 gacgacgatgacgacgacgaagaaga 1742
>ref|XM_572421.1| Cryptococcus neoformans var. neoformans JEC21 bud site selection-related protein (CNH02460) partial mRNA Length = 1662 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 236 gacgacgaccaagaagaaggggagga 261 |||||||| ||||||||||||||||| Sbjct: 783 gacgacgaacaagaagaaggggagga 808
>gb|BC040877.1| Homo sapiens cDNA clone IMAGE:5724291, **** WARNING: chimeric clone **** Length = 2739 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 30 ccatggcccctccctcgccgcgcccc 55 ||||||||||| |||||||||||||| Sbjct: 328 ccatggcccctgcctcgccgcgcccc 303
>emb|AL138958.18| Human DNA sequence from clone RP11-206I15 on chromosome 13 Contains the 3' end of a novel gene (KIAA0410), a transcription elongation factor B (SIII) polypeptide 2 (18kD, elongin B) (TCEB2) pseudogene, the 5' end of the ATP8A2 gene for aminophospholipid transporter-like ATPase Class I type 8A member 2 and three CpG islands, complete sequence Length = 162973 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 ccctccctcgccgcgcccctcc 58 |||||||||||||||||||||| Sbjct: 35008 ccctccctcgccgcgcccctcc 34987
>gb|AC090482.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0015I18, from chromosome 10, complete sequence Length = 161479 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 36589 ccctccgccgccgctccctccg 36568 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 30819 ccctccgccgccgctccctccg 30798
>gb|AC008569.7| Homo sapiens chromosome 19 clone CTC-548K16, complete sequence Length = 227245 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 30 ccatggcccctccctcgccgcgcccc 55 ||||||||||| |||||||||||||| Sbjct: 27866 ccatggcccctgcctcgccgcgcccc 27891
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 ccctccctcgccgcgcccctccgccgccgc 66 |||| |||||||||||||| |||||||||| Sbjct: 9567603 ccctacctcgccgcgccccgccgccgccgc 9567632 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ccgcgcccctccgccgccgctccc 70 |||| ||||||||||||||||||| Sbjct: 21442093 ccgctcccctccgccgccgctccc 21442070
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 cgccgcgcccctccgccgccgc 66 |||||||||||||||||||||| Sbjct: 5614622 cgccgcgcccctccgccgccgc 5614643 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaa 250 ||||||||| ||||||||||||||| Sbjct: 23943502 cgacgacgacgacgacgaccaagaa 23943526 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 29452072 cgacgacgatgacgacgacc 29452091 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ggatggtgctcgccggcgac 373 |||||||||||||||||||| Sbjct: 28936729 ggatggtgctcgccggcgac 28936710 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 10550282 ccgacgacgatgacgacgac 10550301
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 41 ccctcgccgcgcccctccgccgccgc 66 |||||||| ||||||||||||||||| Sbjct: 8656188 ccctcgccccgcccctccgccgccgc 8656213 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaag 254 ||||||||| |||||||||||||| |||| Sbjct: 42925983 cgacgacgacgacgacgaccaagaggaag 42926011 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 cgccgcgcccctccgccgccg 65 ||||||||||||||||||||| Sbjct: 42862178 cgccgcgcccctccgccgccg 42862158 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccgcgcccctccgccgccgct 67 ||||||||||||||||||||| Sbjct: 24482995 ccgcgcccctccgccgccgct 24482975 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccgcgcccctccgccgccgct 67 ||||||||||||||||||||| Sbjct: 10210472 ccgcgcccctccgccgccgct 10210492
>gb|AC161790.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0011F12, complete sequence Length = 122262 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 53441 ccctccgccgccgctccctccg 53462 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 47671 ccctccgccgccgctccctccg 47692
>dbj|AP006726.1| Klebsiella pneumoniae NTUH-K2044 plasmid pK2044 DNA, complete genome Length = 224152 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 cttcctccagaacctgatgagc 115 |||||||||||||||||||||| Sbjct: 171371 cttcctccagaacctgatgagc 171350
>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0462H08 Length = 139152 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 41 ccctcgccgcgcccctccgccgccgc 66 |||||||| ||||||||||||||||| Sbjct: 88383 ccctcgccccgcccctccgccgccgc 88408
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 ccctccctcgccgcgcccctccgccgccgc 66 |||| |||||||||||||| |||||||||| Sbjct: 7700 ccctacctcgccgcgccccgccgccgccgc 7729
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 ccctccctcgccgcgcccctccgccgccgc 66 |||| |||||||||||||| |||||||||| Sbjct: 131239 ccctacctcgccgcgccccgccgccgccgc 131268
>dbj|AK071400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J12, full insert sequence Length = 3091 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 ccctccctcgccgcgcccctccgccgccgc 66 |||| |||||||||||||| |||||||||| Sbjct: 80 ccctacctcgccgcgccccgccgccgccgc 109
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 cgccgcgcccctccgccgccgc 66 |||||||||||||||||||||| Sbjct: 76314 cgccgcgcccctccgccgccgc 76335
>emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315F07, complete sequence Length = 73187 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 48618 ccctccgccgccgctccctccg 48639 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 42985 ccctccgccgccgctccctccg 43006
>emb|AL512546.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0410G08, complete sequence Length = 63554 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ccctccgccgccgctccctccg 74 |||||||||||||||||||||| Sbjct: 3342 ccctccgccgccgctccctccg 3363
>ref|XM_639898.1| Dictyostelium discoideum hypothetical protein (DDB0168238), partial mRNA Length = 276 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gacgacgatgacgacgaccaa 247 ||||||||||||||||||||| Sbjct: 259 gacgacgatgacgacgaccaa 239
>ref|XM_475840.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1413 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacca 246 ||||||||||||||||||||| Sbjct: 579 cgacgacgatgacgacgacca 599
>ref|NM_192799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3201 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccgcgcccctccgccgccgct 67 ||||||||||||||||||||| Sbjct: 2790 ccgcgcccctccgccgccgct 2810
>ref|NM_189471.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 594 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgaccaagaagaag 254 ||||||||| |||||||||||||| |||| Sbjct: 388 cgacgacgacgacgacgaccaagaggaag 360
>ref|NM_189459.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2622 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cgccgcgcccctccgccgccg 65 ||||||||||||||||||||| Sbjct: 1010 cgccgcgcccctccgccgccg 1030
>ref|XM_468759.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1279 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 gacgatgacgacgaccaagaagaag 254 ||||||||||||||| ||||||||| Sbjct: 65 gacgatgacgacgacgaagaagaag 89
>ref|XM_478944.1| Oryza sativa (japonica cultivar-group), mRNA Length = 962 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaa 250 ||||||||| ||||||||||||||| Sbjct: 479 cgacgacgacgacgacgaccaagaa 503
>ref|XM_462837.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccgcgcccctccgccgccgct 67 ||||||||||||||||||||| Sbjct: 158 ccgcgcccctccgccgccgct 138
>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03, complete sequence Length = 146278 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaa 250 ||||||||| ||||||||||||||| Sbjct: 95724 cgacgacgacgacgacgaccaagaa 95748
>gb|AY023320.1| Oryza sativa microsatellite MRG5645 containing (GTC)X8, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgaccaagaa 250 ||||||||| ||||||||||||||| Sbjct: 119 cgacgacgacgacgacgaccaagaa 95
>gb|AC145367.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064J09 map near 50283S, complete sequence Length = 111122 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 225 ccgacgacgatgacgacgaccaagaagaaggggagga 261 |||||||||| ||||||| | |||| ||||||||||| Sbjct: 29471 ccgacgacgaggacgacgtcgaagaggaaggggagga 29507
>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19 map E30331S, complete sequence Length = 164820 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 gacgatgacgacgaccaagaagaag 254 ||||||||||||||| ||||||||| Sbjct: 3138 gacgatgacgacgacgaagaagaag 3162
>gb|AF125464.1| Caenorhabditis elegans cosmid Y48A5B, complete sequence Length = 6169 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacca 246 ||||||||||||||||||||| Sbjct: 411 cgacgacgatgacgacgacca 391
>ref|XM_457570.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B14465g) partial mRNA Length = 1287 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaag 254 |||||||||||||||||| ||||||||| Sbjct: 690 cgacgacgatgacgacgaagaagaagaag 718
>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0008E07, complete sequence Length = 146679 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccgcgcccctccgccgccgct 67 ||||||||||||||||||||| Sbjct: 105422 ccgcgcccctccgccgccgct 105402
>ref|NM_176858.1| Bos taurus alkaline phosphatase, liver/bone/kidney (ALPL), mRNA Length = 1931 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gggaggagaccaagctggaga 341 ||||||||||||||||||||| Sbjct: 448 gggaggagaccaagctggaga 468
>gb|AC117076.3| Dictyostelium discoideum chromosome 2 map 3323568-3470138 strain AX4, complete sequence Length = 146570 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gacgacgatgacgacgaccaa 247 ||||||||||||||||||||| Sbjct: 23852 gacgacgatgacgacgaccaa 23872
>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete sequence Length = 97152 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 gacgatgacgacgaccaagaagaag 254 ||||||||||||||| ||||||||| Sbjct: 94472 gacgatgacgacgacgaagaagaag 94496
>ref|XM_752436.1| Ustilago maydis 521 hypothetical protein (UM01382.1) partial mRNA Length = 3345 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaa 250 |||||| |||||||||||||||||| Sbjct: 168 cgacgatgatgacgacgaccaagaa 192
>ref|XM_755380.1| Ustilago maydis 521 hypothetical protein (UM04326.1) partial mRNA Length = 4947 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacca 246 ||||||||||||||||||||| Sbjct: 1665 cgacgacgatgacgacgacca 1685
>gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosome 7, complete sequence Length = 188677 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 cctccgccgccgctccctccg 74 ||||||||||||||||||||| Sbjct: 97123 cctccgccgccgctccctccg 97143
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 gtccgacgacgatgacgacga 243 ||||||||||||||||||||| Sbjct: 105023 gtccgacgacgatgacgacga 105043
>ref|XM_723171.1| Plasmodium yoelii yoelii str. 17XNL retinitis pigmentosa GTPase regulator protein (PY01014) partial mRNA Length = 2025 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaag 254 ||||||||||||||| ||| ||||||||| Sbjct: 468 cgacgacgatgacgatgacgaagaagaag 496
>gb|AF067612.2| Caenorhabditis elegans cosmid F55A8, complete sequence Length = 69431 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacca 246 ||||||||||||||||||||| Sbjct: 67742 cgacgacgatgacgacgacca 67722
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacca 246 ||||||||||||||||||||| Sbjct: 8482 cgacgacgatgacgacgacca 8462
>emb|X15078.1|HCRPLCLU Halobium cutirubrum L11, L1, L10 and L12 equivalent ribosomal protein gene cluster Length = 5146 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 tccgacgacgatgacgacgac 244 ||||||||||||||||||||| Sbjct: 3944 tccgacgacgatgacgacgac 3964
>emb|X13008.1|HHRAPO H.halobium ribosomal A protein operon (ORF C, A, and B genes) for ribosomal A protein and two other ribosomal proteins Length = 2962 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 tccgacgacgatgacgacgac 244 ||||||||||||||||||||| Sbjct: 2257 tccgacgacgatgacgacgac 2277
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaag 254 |||||||||||||||||| ||||||||| Sbjct: 1132020 cgacgacgatgacgacgaagaagaagaag 1132048
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacca 246 ||||||||||||||||||||| Sbjct: 34323 cgacgacgatgacgacgacca 34303
>dbj|AK061895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G08, full insert sequence Length = 1321 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 gacgatgacgacgaccaagaagaag 254 ||||||||||||||| ||||||||| Sbjct: 107 gacgatgacgacgacgaagaagaag 131
>gb|AC169374.2| Sorghum bicolor clone SB_BBc0019I06, complete sequence Length = 129695 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 41 ccctcgccgcgcccctccgccgccg 65 |||||||||| |||||||||||||| Sbjct: 30050 ccctcgccgcccccctccgccgccg 30026
>gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, complete sequence Length = 209844 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 cctccgccgccgctccctccg 74 ||||||||||||||||||||| Sbjct: 17397 cctccgccgccgctccctccg 17377
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 cctccgccgccgctccctccg 74 ||||||||||||||||||||| Sbjct: 178756 cctccgccgccgctccctccg 178736
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 225 ccgacgacgatgacgacgaccaagaagaaggggagga 261 |||||||||| ||||||| | |||| ||||||||||| Sbjct: 14041063 ccgacgacgaggacgacgtcgaagaggaaggggagga 14041099
>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698H10 Length = 153449 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaag 254 ||||||||| |||||||||||||| |||| Sbjct: 26862 cgacgacgacgacgacgaccaagaggaag 26890
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaag 254 ||||||||| |||||||||||||| |||| Sbjct: 119717 cgacgacgacgacgacgaccaagaggaag 119745 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 cgccgcgcccctccgccgccg 65 ||||||||||||||||||||| Sbjct: 55912 cgccgcgcccctccgccgccg 55892
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 tcgccgcgctctccgccgcgg 215 ||||||||||||||||||||| Sbjct: 4366183 tcgccgcgctctccgccgcgg 4366203 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 gagtccgacgacgatgacgacgacc 245 |||||||||||||| |||||||||| Sbjct: 835151 gagtccgacgacgaggacgacgacc 835175
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccgcgcccctccgccgccgct 67 ||||||||||||||||||||| Sbjct: 75786 ccgcgcccctccgccgccgct 75806
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 cgagatcgccgcgctctccgccgcg 214 |||||||||||||||| |||||||| Sbjct: 75099 cgagatcgccgcgctcaccgccgcg 75075
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaa 250 ||||||||| ||||||||||||||| Sbjct: 98429 cgacgacgacgacgacgaccaagaa 98453
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccgcgcccctccgccgccgct 67 ||||||||||||||||||||| Sbjct: 63379 ccgcgcccctccgccgccgct 63359
>gb|AE005042.1| Halobacterium sp. NRC-1 section 73 of 170 of the complete genome Length = 10615 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tccgacgacgatgacgacgac 244 ||||||||||||||||||||| Sbjct: 509 tccgacgacgatgacgacgac 489
>dbj|AK069813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F23, full insert sequence Length = 962 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaa 250 ||||||||| ||||||||||||||| Sbjct: 479 cgacgacgacgacgacgaccaagaa 503
>dbj|AK063581.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-H10, full insert sequence Length = 665 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgaccaagaa 250 ||||||||| ||||||||||||||| Sbjct: 84 cgacgacgacgacgacgaccaagaa 60
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cctccggagcgccggtcgacg 89 ||||||||||||||||||||| Sbjct: 478218 cctccggagcgccggtcgacg 478238 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 217 gggcgagtccgacgacgatgacgacgac 244 |||||| | ||||||||||||||||||| Sbjct: 2889702 gggcgacttcgacgacgatgacgacgac 2889675
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 225 ccgacgacgatgacgacgaccaagaagaaggggagga 261 |||||||||| ||||||| | |||| ||||||||||| Sbjct: 14123065 ccgacgacgaggacgacgtcgaagaggaaggggagga 14123101
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tccgacgacgatgacgacgac 244 ||||||||||||||||||||| Sbjct: 21825 tccgacgacgatgacgacgac 21805
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tccgacgacgatgacgacgac 244 ||||||||||||||||||||| Sbjct: 147385 tccgacgacgatgacgacgac 147365
>gb|AC149868.2| Mus musculus BAC clone RP23-226I6 from 7, complete sequence Length = 190971 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 cctccgccgccgctccctccg 74 ||||||||||||||||||||| Sbjct: 38537 cctccgccgccgctccctccg 38557
>emb|AL731700.12| Mouse DNA sequence from clone RP23-239G1 on chromosome 2, complete sequence Length = 187667 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaag 254 ||||||||||||||||||| | ||||||| Sbjct: 18371 cgacgacgatgacgacgacaatgaagaag 18399
>gb|M18443.1|BOVAP Bovine alkaline phosphatase (AP) mRNA, complete cds Length = 1931 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 gggaggagaccaagctggaga 341 ||||||||||||||||||||| Sbjct: 448 gggaggagaccaagctggaga 468
>dbj|AB076594.1| Sequoia sempervirens Myb gene for Myb transcription factor, partial cds Length = 900 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ccctccgccgccgctccctcc 73 ||||||||||||||||||||| Sbjct: 140 ccctccgccgccgctccctcc 160
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccgcgcccctccgccgccgct 67 ||||||||||||||||||||| Sbjct: 135071 ccgcgcccctccgccgccgct 135091
>ref|NM_112592.2| Arabidopsis thaliana unknown protein AT3G17160 mRNA, complete cds Length = 1387 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaaggggagga 261 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 262 cgacgacgaggacgaggacgatgaagaaggggagga 297
>ref|XM_493700.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1049 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ccgcgcccctccgccgccgc 66 |||||||||||||||||||| Sbjct: 608 ccgcgcccctccgccgccgc 627
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 tcgacaccaactccttcctc 160 |||||||||||||||||||| Sbjct: 3146580 tcgacaccaactccttcctc 3146599
>ref|XM_482634.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1857 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cgatgacgacgaccaagaagaagg 255 ||||||||||||| |||||||||| Sbjct: 1270 cgatgacgacgacgaagaagaagg 1247
>ref|XM_471622.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 549 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 188 ccgacgacgatgacgacgac 207
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 acgagatcgccgcgctctccgccg 212 |||||||||||||||| ||||||| Sbjct: 2289176 acgagatcgccgcgctgtccgccg 2289199
>ref|XM_469577.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2205 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 cgagatcgccgcgctctccgccgc 213 |||||||||||||||| ||||||| Sbjct: 352 cgagatcgccgcgctcaccgccgc 375
>ref|NM_185573.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2968 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 250 cgacgacgatgacgacgacc 269
>ref|XM_506591.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.129 mRNA Length = 2984 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 269 cgacgacgatgacgacgacc 288
>ref|XM_477450.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 338 ccgacgacgatgacgacgac 319
>gb|AY440402.1| Armigeres subalbatus ASAP ID: 42407 troponin complex subunit mRNA sequence Length = 737 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cctcgacgacttcctcctca 188 |||||||||||||||||||| Sbjct: 144 cctcgacgacttcctcctca 125
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 83862 cgacgacgatgacgacgacc 83881
>gb|AY378100.1| Klebsiella pneumoniae plasmid pLVPK, complete sequence Length = 219385 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ctcttcctccagaacctgatgagc 115 ||||||| |||||||||||||||| Sbjct: 22934 ctcttccaccagaacctgatgagc 22911
>gb|AC008341.3| Drosophila melanogaster clone BACR15P11, complete sequence Length = 171235 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 caagctggagaaggagatcg 350 |||||||||||||||||||| Sbjct: 144872 caagctggagaaggagatcg 144853
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ggggagggctccgcggaggc 297 |||||||||||||||||||| Sbjct: 49885 ggggagggctccgcggaggc 49866
>ref|XM_366697.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02773.4) partial mRNA Length = 675 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 128 ccgacgacgatgacgacgac 147
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 cgccgcgctctccgccgcggcggg 219 |||||||||| ||||||||||||| Sbjct: 231654 cgccgcgctcgccgccgcggcggg 231677
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 cgagatcgccgcgctctccgccgc 213 |||||||||||||||| ||||||| Sbjct: 9208 cgagatcgccgcgctcaccgccgc 9185
>gb|AY657521.1| Synthetic construct Peudomonas aeruginosa clone FLH040511.01F PA4676 gene, partial cds Length = 648 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cggtcgacgcgctcttcctc 100 |||||||||||||||||||| Sbjct: 437 cggtcgacgcgctcttcctc 418
>gb|BT014866.1| Arabidopsis thaliana At3g17160 gene, complete cds Length = 498 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaaggggagga 261 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 207 cgacgacgaggacgaggacgatgaagaaggggagga 242
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gccgccgctccctccggagc 78 |||||||||||||||||||| Sbjct: 4769223 gccgccgctccctccggagc 4769242
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cggtcgacgcgctcttcctc 100 |||||||||||||||||||| Sbjct: 978656 cggtcgacgcgctcttcctc 978637
>ref|XM_755121.1| Ustilago maydis 521 hypothetical protein (UM04067.1) partial mRNA Length = 1854 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 1598 ccgacgacgatgacgacgac 1617
>ref|XM_756776.1| Ustilago maydis 521 hypothetical protein (UM05722.1) partial mRNA Length = 3498 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tccgacgacgatgacgacga 243 |||||||||||||||||||| Sbjct: 1579 tccgacgacgatgacgacga 1598 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gatgacgacgaccaagaaga 252 |||||||||||||||||||| Sbjct: 1381 gatgacgacgaccaagaaga 1400
>ref|XM_750405.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g11660) partial mRNA Length = 2754 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gagtccgacgacgatgacga 240 |||||||||||||||||||| Sbjct: 220 gagtccgacgacgatgacga 239
>gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence Length = 180971 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 10060 ccgacgacgatgacgacgac 10079
>gb|AY124578.1| Lung-eye-trachea disease-associated herpesvirus putative protease (UL26) and putative assembly protein (UL26.5) genes, complete cds Length = 1743 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 1365 cgacgacgatgacgacgacc 1384
>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete sequence Length = 120132 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gaccaagctggagaaggaga 347 |||||||||||||||||||| Sbjct: 118981 gaccaagctggagaaggaga 119000
>ref|XM_786942.1| PREDICTED: Strongylocentrotus purpuratus similar to Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial precursor (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) (LOC587199), partial mRNA Length = 1678 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 gacaccaactccttcctcacccag 166 |||||||||||||||| ||||||| Sbjct: 1337 gacaccaactccttccacacccag 1314
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome Length = 154746 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 150210 cgacgacgatgacgacgacc 150229 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 131532 cgacgacgatgacgacgacc 131513
>ref|XM_778157.1| PREDICTED: Strongylocentrotus purpuratus similar to Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial precursor (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) (LOC577961), mRNA Length = 1249 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 gacaccaactccttcctcacccag 166 |||||||||||||||| ||||||| Sbjct: 665 gacaccaactccttccacacccag 642
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cgcccctccgccgccgctcc 69 |||||||||||||||||||| Sbjct: 128875 cgcccctccgccgccgctcc 128856
>emb|AL662962.3|OSJN00165 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029L02, complete sequence Length = 165786 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 54348 ccgacgacgatgacgacgac 54329
>gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence Length = 233369 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 60620 ccgacgacgatgacgacgac 60601
>gb|DQ271746.1| Mustela vison clone XII1J9 microsatellite sequence Length = 425 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 gctcttcctccagaacctgatgag 114 ||||||||||||||||||| |||| Sbjct: 126 gctcttcctccagaacctggtgag 149
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 4198585 ccgacgacgatgacgacgac 4198566
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tccgacgacgatgacgacga 243 |||||||||||||||||||| Sbjct: 2421469 tccgacgacgatgacgacga 2421450
>ref|NM_136640.2| Drosophila melanogaster CG8801-RA (CG8801), mRNA Length = 2292 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 caagctggagaaggagatcg 350 |||||||||||||||||||| Sbjct: 1310 caagctggagaaggagatcg 1329
>gb|AC008494.8| Homo sapiens chromosome 5 clone CTC-428G20, complete sequence Length = 181800 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 gcccctccctcgccgcgcccctcc 58 |||||||||||||| ||||||||| Sbjct: 166083 gcccctccctcgccccgcccctcc 166060
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 183 tcctcaacgagatcgccgcgctctccgccgcg 214 |||||| || |||||||||||||| ||||||| Sbjct: 2366883 tcctcaccgcgatcgccgcgctctacgccgcg 2366914
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 12760129 ccgacgacgatgacgacgac 12760110
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cgatgacgacgaccaagaagaagg 255 ||||||||||||| |||||||||| Sbjct: 21560660 cgatgacgacgacgaagaagaagg 21560637
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 25748202 ccgacgacgatgacgacgac 25748183 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 cctccgccgccgctccctcc 73 |||||||||||||||||||| Sbjct: 15108365 cctccgccgccgctccctcc 15108384 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ccgcgcccctccgccgccgc 66 |||||||||||||||||||| Sbjct: 1642096 ccgcgcccctccgccgccgc 1642077
>gb|AC007086.10|AC007086 Drosophila melanogaster, chromosome 2R, region 45A-46A, BAC clone BACR14J24, complete sequence Length = 186241 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 caagctggagaaggagatcg 350 |||||||||||||||||||| Sbjct: 170610 caagctggagaaggagatcg 170629
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cgcccctccgccgccgctcc 69 |||||||||||||||||||| Sbjct: 125212 cgcccctccgccgccgctcc 125231
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 312 tgctctcgcgggaggagaccaagctggagaag 343 |||||||||| ||| || |||||||||||||| Sbjct: 3226926 tgctctcgcgcgagaaggccaagctggagaag 3226895
>gb|AE004881.1| Pseudomonas aeruginosa PAO1, section 442 of 529 of the complete genome Length = 12421 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 cggtcgacgcgctcttcctc 100 |||||||||||||||||||| Sbjct: 6310 cggtcgacgcgctcttcctc 6329
>gb|BT004082.1| Arabidopsis thaliana clone RAFL15-06-A06 (R20795) unknown protein (At3g17160) mRNA, complete cds Length = 787 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgaccaagaagaaggggagga 261 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 262 cgacgacgaggacgaggacgatgaagaaggggagga 297
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 147344 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 cgagatcgccgcgctctccgccgc 213 |||||||||||||||| ||||||| Sbjct: 132894 cgagatcgccgcgctcaccgccgc 132871
>gb|AC160764.2| Ornithorhynchus anatinus BAC clone OABb-454A1 from chromosome unknown, complete sequence Length = 125050 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 ctccctcgccgcgcccctccgccgccgc 66 |||||| |||| |||||||||||||||| Sbjct: 28776 ctccctggccgggcccctccgccgccgc 28803
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cgacgacttcctcctcaacg 191 |||||||||||||||||||| Sbjct: 2574351 cgacgacttcctcctcaacg 2574370
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ggatggtgctcgccggcgac 373 |||||||||||||||||||| Sbjct: 54266 ggatggtgctcgccggcgac 54247
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0493C11 Length = 143113 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ccgcgcccctccgccgccgc 66 |||||||||||||||||||| Sbjct: 45267 ccgcgcccctccgccgccgc 45248
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ccgcgcccctccgccgccgctccc 70 |||| ||||||||||||||||||| Sbjct: 3703 ccgctcccctccgccgccgctccc 3680
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ccgcgcccctccgccgccgctccc 70 |||| ||||||||||||||||||| Sbjct: 59198 ccgctcccctccgccgccgctccc 59175
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ggagggctccgcggaggcca 299 |||||||||||||||||||| Sbjct: 86343 ggagggctccgcggaggcca 86362
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 30406 ccgacgacgatgacgacgac 30387
>dbj|AP005910.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0034G14 Length = 154120 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 cctccgccgccgctccctcc 73 |||||||||||||||||||| Sbjct: 87685 cctccgccgccgctccctcc 87704
>dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0042E08 Length = 166257 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccgacgacgatgacgacgac 244 |||||||||||||||||||| Sbjct: 101611 ccgacgacgatgacgacgac 101630
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cgatgacgacgaccaagaagaagg 255 ||||||||||||| |||||||||| Sbjct: 20834 cgatgacgacgacgaagaagaagg 20811
>ref|XM_566314.1| Anopheles gambiae str. PEST ENSANGP00000028348 (ENSANGG00000025164), partial mRNA Length = 147 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 67 cgacgacgatgacgacgacc 48
>ref|XM_310627.2| Anopheles gambiae str. PEST ENSANGP00000020064 (ENSANGG00000017575), partial mRNA Length = 3699 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 caagctggagaaggagatcg 350 |||||||||||||||||||| Sbjct: 2292 caagctggagaaggagatcg 2311
>dbj|AK106769.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F07, full insert sequence Length = 1866 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cgatgacgacgaccaagaagaagg 255 ||||||||||||| |||||||||| Sbjct: 1279 cgatgacgacgacgaagaagaagg 1256
>gb|AY937239.1| Chlamydomonas incerta plus agglutinin (SAG1) gene, partial cds Length = 13081 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cctcgccgcgcccctccgcc 61 |||||||||||||||||||| Sbjct: 12937 cctcgccgcgcccctccgcc 12956
>dbj|AK102007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079N23, full insert sequence Length = 2983 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 268 cgacgacgatgacgacgacc 287
>gb|AF181654.1|AF181654 Drosophila melanogaster BcDNA.LD23830 (BcDNA.LD23830) mRNA, complete cds Length = 2167 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 caagctggagaaggagatcg 350 |||||||||||||||||||| Sbjct: 1256 caagctggagaaggagatcg 1275
>dbj|AK069863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037L12, full insert sequence Length = 1049 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ccgcgcccctccgccgccgc 66 |||||||||||||||||||| Sbjct: 608 ccgcgcccctccgccgccgc 627
>gb|AF162221.1|AF162221 Xestia c-nigrum granulovirus genome, complete sequence Length = 178733 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gacgacgatgacgacgaccaagaa 250 |||||||||||||||||| ||||| Sbjct: 56248 gacgacgatgacgacgacaaagaa 56225
>dbj|AK065701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037E09, full insert sequence Length = 1310 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ggggagggctccgcggaggc 297 |||||||||||||||||||| Sbjct: 106 ggggagggctccgcggaggc 87
>dbj|AK064333.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-G05, full insert sequence Length = 2968 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 250 cgacgacgatgacgacgacc 269
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 114994 cgacgacgatgacgacgacc 115013
>gb|AE003833.4| Drosophila melanogaster chromosome 2R, section 17 of 73 of the complete sequence Length = 297107 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 caagctggagaaggagatcg 350 |||||||||||||||||||| Sbjct: 88541 caagctggagaaggagatcg 88522
>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0049D13, complete sequence Length = 136942 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 115119 cgacgacgatgacgacgacc 115100
>emb|AJ628149.4| Micromonospora echinospora genomic region of the gentamicin biosynthesis gene cluster, strain DSM 43036 Length = 84222 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 59965 cgacgacgatgacgacgacc 59946 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgacgacgatgacgacgacc 245 |||||||||||||||||||| Sbjct: 59923 cgacgacgatgacgacgacc 59904
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ggagggctccgcggaggcca 299 |||||||||||||||||||| Sbjct: 47336 ggagggctccgcggaggcca 47355
>gb|U74296.1|OSU74296 Oryza sativa water stress inducible protein (KCDL917) mRNA, complete cds Length = 858 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ccgcgcccctccgccgccgc 66 |||||||||||||||||||| Sbjct: 357 ccgcgcccctccgccgccgc 376
>gb|AC091981.4| Homo sapiens chromosome 5 clone RP11-549L3, complete sequence Length = 187685 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 gcccctccctcgccgcgcccctcc 58 |||||||||||||| ||||||||| Sbjct: 130538 gcccctccctcgccccgcccctcc 130561 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,195,868 Number of Sequences: 3902068 Number of extensions: 3195868 Number of successful extensions: 95718 Number of sequences better than 10.0: 180 Number of HSP's better than 10.0 without gapping: 204 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89921 Number of HSP's gapped (non-prelim): 5793 length of query: 374 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 352 effective length of database: 17,147,199,772 effective search space: 6035814319744 effective search space used: 6035814319744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
