ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast73h06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MLP2_YEAST (P40457) Protein MLP2 (Myosin-like protein 2) | 34 | 0.16 | 2 | TRPC_RHILO (Q98ME3) Indole-3-glycerol phosphate synthase (EC 4.1... | 31 | 1.3 | 3 | JHD1_CAEEL (Q95Q98) JmjC domain-containing histone demethylation... | 31 | 1.7 | 4 | SPO71_YEAST (Q03868) Sporulation-specific protein 71 | 30 | 2.3 | 5 | MCPH1_HUMAN (Q8NEM0) Microcephalin | 30 | 2.3 | 6 | MCPH1_PONPY (P61594) Microcephalin | 30 | 2.9 | 7 | MCPH1_COLGU (P61590) Microcephalin | 30 | 2.9 | 8 | MCPH1_GORGO (P61591) Microcephalin | 30 | 2.9 | 9 | MCPH1_PANTR (P61593) Microcephalin | 30 | 3.8 | 10 | MCPH1_MACFA (Q5IFK1) Microcephalin | 29 | 5.0 | 11 | PML_MOUSE (Q60953) Probable transcription factor PML | 29 | 5.0 | 12 | MCPH1_HYLLA (P61592) Microcephalin | 29 | 5.0 | 13 | TRAY1_SALTI (P12059) Protein traY | 28 | 8.6 | 14 | CUA2B_TENMO (P80682) Larval cuticle protein A2B (TM-A2B) (TM-LCP... | 28 | 8.6 |
|---|
>MLP2_YEAST (P40457) Protein MLP2 (Myosin-like protein 2)| Length = 1679 Score = 34.3 bits (77), Expect = 0.16 Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 1/109 (0%) Frame = +2 Query: 122 RNAQEKMASFVAARVNMKAELDSLVDNSLTETEFEEGWSALIQRHDASENEYLQFLWEMR 301 + A +F +VNM+ E D ++D E FE+ + + +SE EY + + ++ Sbjct: 1376 KTANSSSDAFEKLKVNMEKEKDRIIDERTKE--FEKKLQETLNKSTSSEAEYSKDIETLK 1433 Query: 302 KTWAPVYFMQDFFPFVVSARGSQGAFSLFKEKVLLP-KDKIENLIESMR 445 K W Y + + R + A K+++ LP +++I+ +I + Sbjct: 1434 KEWLKEYEDE-------TLRRIKEAEENLKKRIRLPSEERIQKIISKRK 1475
>TRPC_RHILO (Q98ME3) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 270 Score = 31.2 bits (69), Expect = 1.3 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +2 Query: 56 EAMAKAIAEV-MPRARHRFCRWDRNAQEKMASFVAARVNMKAELDSLVDNSLTETEFEEG 232 E + KA A V +P R F E A A + + A +D + ++L T FE G Sbjct: 105 EFLTKARAAVALPALRKDFLFDPYQVYEARAWGADAILIIMASVDDALASALEATAFELG 164 Query: 233 WSALIQRHDASENE 274 ALI+ HD +E + Sbjct: 165 MDALIEVHDEAETQ 178
>JHD1_CAEEL (Q95Q98) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 1076 Score = 30.8 bits (68), Expect = 1.7 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Frame = +2 Query: 212 ETEFEEGWSALIQRHDASENEY-LQFLWEMRKTWAPVYFMQDFFPFVVSARGS---QGAF 379 E EFEE + + QR D E EY + + + Y +++ P V+ R S GA Sbjct: 595 EEEFEEEYEGIGQRDDQEEEEYDAEEPEDQEEEEEDEYQAEEYTPTPVTRRSSSRRSGAK 654 Query: 380 SLFKEKVLLPKDKIENL 430 + E+V + KDK E + Sbjct: 655 NDESEEVSVKKDKKEKM 671
>SPO71_YEAST (Q03868) Sporulation-specific protein 71| Length = 1245 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 8/75 (10%) Frame = +2 Query: 146 SFVAARVNMKAELDSLVDNSLTETEFEEGWSAL--------IQRHDASENEYLQFLWEMR 301 S A R N +DS++D++ TE E EE W Q + N++++ W Sbjct: 797 SMKAYRANPPLPIDSMIDDTSTEIEKEEIWKQWKKIPEVYEQQPYPLDTNDHIE--WMNC 854 Query: 302 KTWAPVYFMQDFFPF 346 +T Y +DF+ F Sbjct: 855 QTTQSEYDSRDFYAF 869
>MCPH1_HUMAN (Q8NEM0) Microcephalin| Length = 835 Score = 30.4 bits (67), Expect = 2.3 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 3/103 (2%) Frame = +2 Query: 116 WDRNAQEKMA-SFVAARVNMKAELDSLVDNSLTETEFEEGWSALIQRHDASENEYLQFLW 292 W N E + +F V+M A++ + +T F++G+ + + + + LW Sbjct: 16 WSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLW 75 Query: 293 EMRKTWAPVYFMQDFFPFVVSARGSQGAFSLFKE--KVLLPKD 415 + A + + FP +A ++ SL K+ K + PKD Sbjct: 76 VEKCRTAGAHIDESLFP---AANMNEHLSSLIKKKRKCMQPKD 115
>MCPH1_PONPY (P61594) Microcephalin| Length = 839 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 3/103 (2%) Frame = +2 Query: 116 WDRNAQEKMA-SFVAARVNMKAELDSLVDNSLTETEFEEGWSALIQRHDASENEYLQFLW 292 W N E + +F V+M A++ + +T F++G+ + + + + LW Sbjct: 16 WSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLW 75 Query: 293 EMRKTWAPVYFMQDFFPFVVSARGSQGAFSLFKE--KVLLPKD 415 + A + + FP +A ++ SL K+ K + PKD Sbjct: 76 VEKCRTAGAHIDESLFP---AANTNEHLPSLIKKKRKCMQPKD 115
>MCPH1_COLGU (P61590) Microcephalin| Length = 841 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 3/103 (2%) Frame = +2 Query: 116 WDRNAQEKMA-SFVAARVNMKAELDSLVDNSLTETEFEEGWSALIQRHDASENEYLQFLW 292 W N E + +F V+M A++ + +T F++G+ + + + + LW Sbjct: 16 WSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLW 75 Query: 293 EMRKTWAPVYFMQDFFPFVVSARGSQGAFSLFKE--KVLLPKD 415 + A + + FP +A ++ SL K+ K + PKD Sbjct: 76 VEKCRTAGAHIDESLFP---AANTNEHLPSLIKKKRKCMQPKD 115
>MCPH1_GORGO (P61591) Microcephalin| Length = 835 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 3/103 (2%) Frame = +2 Query: 116 WDRNAQEKMA-SFVAARVNMKAELDSLVDNSLTETEFEEGWSALIQRHDASENEYLQFLW 292 W N E + +F V+M A++ + +T F++G+ + + + + LW Sbjct: 16 WSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLW 75 Query: 293 EMRKTWAPVYFMQDFFPFVVSARGSQGAFSLFKE--KVLLPKD 415 + A + + FP +A ++ SL K+ K + PKD Sbjct: 76 VEKCRTAGAHIDESLFP---AANTNEHLPSLIKKKRKCMQPKD 115
>MCPH1_PANTR (P61593) Microcephalin| Length = 835 Score = 29.6 bits (65), Expect = 3.8 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 3/103 (2%) Frame = +2 Query: 116 WDRNAQEKMA-SFVAARVNMKAELDSLVDNSLTETEFEEGWSALIQRHDASENEYLQFLW 292 W N E + +F V M A++ + +T F++G+ + + + + LW Sbjct: 16 WSSNGTENYSKTFTTQLVEMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLW 75 Query: 293 EMRKTWAPVYFMQDFFPFVVSARGSQGAFSLFKE--KVLLPKD 415 + A + + FP +A ++ SL K+ K + PKD Sbjct: 76 VEKCRTAGAHIDESLFP---AANTNEHLPSLIKKKRKCMQPKD 115
>MCPH1_MACFA (Q5IFK1) Microcephalin| Length = 842 Score = 29.3 bits (64), Expect = 5.0 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 3/103 (2%) Frame = +2 Query: 116 WDRNAQEKMA-SFVAARVNMKAELDSLVDNSLTETEFEEGWSALIQRHDASENEYLQFLW 292 W N E + +F V+M A++ + +T F++G+ + + + + LW Sbjct: 16 WSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKARKRGVKLVSVLW 75 Query: 293 EMRKTWAPVYFMQDFFPFVVSARGSQGAFSLFKE--KVLLPKD 415 + A + + FP +A ++ SL K+ K + PKD Sbjct: 76 VEKCRTAGAHIDESLFP---AANTNEHLPSLIKKKRKCMQPKD 115
>PML_MOUSE (Q60953) Probable transcription factor PML| Length = 808 Score = 29.3 bits (64), Expect = 5.0 Identities = 17/40 (42%), Positives = 18/40 (45%) Frame = -2 Query: 227 LRIPSLSANCQPSCPARLSC*LLLPQRMPSFPGHSCPICR 108 LR PS A Q CP L C L PG CPIC+ Sbjct: 29 LRCPSCQA--QAKCPKLLPCLHTLCSGCLEAPGLQCPICK 66
>MCPH1_HYLLA (P61592) Microcephalin| Length = 840 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 1/101 (0%) Frame = +2 Query: 116 WDRNAQEKMA-SFVAARVNMKAELDSLVDNSLTETEFEEGWSALIQRHDASENEYLQFLW 292 W N E + +F V+M A++ + +T F++G+ + + + + LW Sbjct: 16 WSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLW 75 Query: 293 EMRKTWAPVYFMQDFFPFVVSARGSQGAFSLFKEKVLLPKD 415 + A + + FP ++ + K K + PKD Sbjct: 76 VEKCRTAGAHIDESLFP-AINTNEHLPSLIKKKRKCMQPKD 115
>TRAY1_SALTI (P12059) Protein traY| Length = 69 Score = 28.5 bits (62), Expect = 8.6 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 143 ASFVAARVNMKAELDSLVDNSLTETEFEEGWS 238 A+ + +VN+ LD +D L E+ + GWS Sbjct: 7 ANPIGKKVNISCSLDEAIDELLMESALKSGWS 38
>CUA2B_TENMO (P80682) Larval cuticle protein A2B (TM-A2B) (TM-LCP A2B)| Length = 117 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +1 Query: 136 KDGILCGSKSQHESRAG---QLG*QFADRDGIRRRMERT 243 +DG+ SKSQ ESR+G Q D DG RR +E T Sbjct: 39 QDGLTGDSKSQIESRSGDVVQGSYSLVDPDGTRRTVEYT 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,021,360 Number of Sequences: 219361 Number of extensions: 1304463 Number of successful extensions: 3753 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3676 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3752 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
