ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast73h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT030651.6| Mouse DNA sequence from clone RP23-229N10 on chr... 44 0.40
2emb|CT030710.7| Mouse DNA sequence from clone RP23-386A10 on chr... 44 0.40
3gb|CP000081.1| Leishmania major chromosome 35, complete sequence 42 1.6
4emb|AL713965.10| Human DNA sequence from clone RP4-681L3 on chro... 42 1.6
5gb|AC099339.6| Homo sapiens BAC clone RP11-206F17 from 4, comple... 42 1.6
6gb|AC093748.3| Homo sapiens BAC clone RP11-29P18 from 4, complet... 42 1.6
7emb|BX544887.4| Mouse DNA sequence from clone RP23-462P24 on chr... 42 1.6
8gb|AC102478.16| Mus musculus chromosome 5, clone RP24-407H12, co... 42 1.6
9emb|AL359232.4|CNS05TEJ Human chromosome 14 DNA sequence BAC R-9... 42 1.6
10gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, co... 40 6.2
11ref|XM_636400.1| Dictyostelium discoideum hypothetical protein (... 40 6.2
12gb|AC167021.3| Mus musculus BAC clone RP23-152D8 from chromosome... 40 6.2
13gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, co... 40 6.2
14ref|XM_522964.1| PREDICTED: Pan troglodytes similar to MGC53446 ... 40 6.2
15gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV... 40 6.2
16gb|AC147568.5| Mus musculus chromosome 7 clone RP23-15J23, compl... 40 6.2
17gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete... 40 6.2
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.2
19gb|AC115900.11| Mus musculus chromosome 6, clone RP24-464A7, com... 40 6.2
20gb|AC126034.4| Mus musculus BAC clone RP24-116I7 from chromosome... 40 6.2
21gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complet... 40 6.2
22gb|AC102527.6| Mus musculus chromosome 8, clone RP23-29G4, compl... 40 6.2
23emb|Z69838.1|HSV1164A6 Human DNA sequence from clone GHc-1164A6 ... 40 6.2
24emb|AL512658.12| Human DNA sequence from clone RP11-518I13 on ch... 40 6.2
25emb|AL499605.6| Human DNA sequence from clone RP11-478L17 on chr... 40 6.2
26emb|AL357873.17| Human DNA sequence from clone RP11-344F13 on ch... 40 6.2
27emb|AL356753.16| Human DNA sequence from clone RP11-481G8 on chr... 40 6.2
28emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, c... 40 6.2
29gb|AC156023.2| Mus musculus BAC clone RP23-210I15 from chromosom... 40 6.2
30emb|BX465857.6| Zebrafish DNA sequence from clone DKEYP-59A12 in... 40 6.2
31gb|AC069549.5| Homo sapiens chromosome 10 clone RP11-575A19, com... 40 6.2
32gb|AC097512.2| Homo sapiens BAC clone RP11-412P11 from 4, comple... 40 6.2
33gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.2
34gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
37gb|AC096670.1| Homo sapiens BAC clone RP11-438K19 from 2, comple... 40 6.2
38gb|AF003529.2| Homo sapiens glypican 3 (GPC3) gene, partial cds ... 40 6.2
39dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
40dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
41gb|AC103935.10| Mus musculus chromosome 8, clone RP23-431O7, com... 40 6.2
42gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, r... 40 6.2
43gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10... 40 6.2
44gb|U82516.1|DDU82516 Dictyostelium discoideum random slug cDNA22... 40 6.2
45emb|AL683854.20| Mouse DNA sequence from clone RP23-237K13 on ch... 40 6.2
46emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein... 40 6.2
47emb|AL590327.3|CNS07EG8 Human chromosome 14 DNA sequence Partial... 40 6.2
48emb|AL772293.7| Mouse DNA sequence from clone RP23-57D24 on chro... 40 6.2 
>emb|CT030651.6| Mouse DNA sequence from clone RP23-229N10 on chromosome 9, complete
            sequence
          Length = 128191

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 320  tatttcatgcaagatttctttccttttgtt 349
            ||||||||||||| ||||||| ||||||||
Sbjct: 5164 tatttcatgcaaggtttctttgcttttgtt 5135
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>emb|CT030710.7| Mouse DNA sequence from clone RP23-386A10 on chromosome 9, complete
              sequence
          Length = 206562

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 320    tatttcatgcaagatttctttccttttgtt 349
              ||||||||||||| ||||||| ||||||||
Sbjct: 154146 tatttcatgcaaggtttctttgcttttgtt 154117
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 334     tttctttccttttgttgtttc 354
               |||||||||||||||||||||
Sbjct: 1728362 tttctttccttttgttgtttc 1728382
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>emb|AL713965.10| Human DNA sequence from clone RP4-681L3 on chromosome 1 Contains the
             SLC26A9 gene for solute carrier family 26 member 9,
             complete sequence
          Length = 88823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 334   tttctttccttttgttgtttcagccagag 362
             ||||||||||||| ||||||||| |||||
Sbjct: 39756 tttctttcctttttttgtttcagacagag 39784
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>gb|AC099339.6| Homo sapiens BAC clone RP11-206F17 from 4, complete sequence
          Length = 123182

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 64   ggcgaaggcaatagctgaggtcatgccac 92
            ||||| |||||||| ||||||||||||||
Sbjct: 5257 ggcgatggcaatagttgaggtcatgccac 5229
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>gb|AC093748.3| Homo sapiens BAC clone RP11-29P18 from 4, complete sequence
          Length = 112626

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 333   atttctttccttttgttgttt 353
             |||||||||||||||||||||
Sbjct: 43707 atttctttccttttgttgttt 43727
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>emb|BX544887.4| Mouse DNA sequence from clone RP23-462P24 on chromosome X, complete
             sequence
          Length = 77800

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 418   gatagagaatctgattgaaagtatgagga 446
             |||||||||||| ||||||||| ||||||
Sbjct: 58838 gatagagaatcttattgaaagtttgagga 58810
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>gb|AC102478.16| Mus musculus chromosome 5, clone RP24-407H12, complete sequence
          Length = 153971

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 320   tatttcatgcaagatttcttt 340
             |||||||||||||||||||||
Sbjct: 37402 tatttcatgcaagatttcttt 37422
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>emb|AL359232.4|CNS05TEJ Human chromosome 14 DNA sequence BAC R-90C22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 152544

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 287   ctgtgggagatgaggaagacc 307
             |||||||||||||||||||||
Sbjct: 78828 ctgtgggagatgaggaagacc 78808
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>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence
          Length = 190298

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 346    tgttgtttcagccagaggcagcca 369
              |||||||| |||||||||||||||
Sbjct: 122628 tgttgtttaagccagaggcagcca 122605
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>ref|XM_636400.1| Dictyostelium discoideum hypothetical protein (DDB0214884), partial
            mRNA
          Length = 2175

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  ctggacagcttggttgacaa 201
            ||||||||||||||||||||
Sbjct: 1924 ctggacagcttggttgacaa 1905
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>gb|AC167021.3| Mus musculus BAC clone RP23-152D8 from chromosome 6, complete sequence
          Length = 222021

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 354   cagccagaggcagccagggggcat 377
             ||||||||||||||||| ||||||
Sbjct: 60351 cagccagaggcagccagagggcat 60328
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>gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, complete sequence
          Length = 206302

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 346    tgttgtttcagccagaggcagcca 369
              |||||||| |||||||||||||||
Sbjct: 162610 tgttgtttaagccagaggcagcca 162633
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>ref|XM_522964.1| PREDICTED: Pan troglodytes similar to MGC53446 protein (LOC467569),
           mRNA
          Length = 1206

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 cagccagaggcagccagggg 373
           ||||||||||||||||||||
Sbjct: 678 cagccagaggcagccagggg 697
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>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete
             sequence
          Length = 116448

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   tttctttccttttgttgttt 353
             ||||||||||||||||||||
Sbjct: 70558 tttctttccttttgttgttt 70539
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>gb|AC147568.5| Mus musculus chromosome 7 clone RP23-15J23, complete sequence
          Length = 211115

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    gcaagatttctttccttttg 347
              ||||||||||||||||||||
Sbjct: 196072 gcaagatttctttccttttg 196091
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>gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete sequence
          Length = 164920

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   ggcagcaagagtcaacatga 173
             ||||||||||||||||||||
Sbjct: 49976 ggcagcaagagtcaacatga 49995
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 388     caaagagaaagtgttgcttc 407
               ||||||||||||||||||||
Sbjct: 2320251 caaagagaaagtgttgcttc 2320270
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>gb|AC115900.11| Mus musculus chromosome 6, clone RP24-464A7, complete sequence
          Length = 175003

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 354   cagccagaggcagccagggggcat 377
             ||||||||||||||||| ||||||
Sbjct: 23284 cagccagaggcagccagagggcat 23307
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>gb|AC126034.4| Mus musculus BAC clone RP24-116I7 from chromosome 8, complete sequence
          Length = 156367

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   atttctttccttttgttgtt 352
             ||||||||||||||||||||
Sbjct: 67184 atttctttccttttgttgtt 67165
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>gb|AC121989.2| Mus musculus BAC clone RP24-298C8 from 7, complete sequence
          Length = 175515

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   gcaagatttctttccttttg 347
             ||||||||||||||||||||
Sbjct: 84048 gcaagatttctttccttttg 84067
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>gb|AC102527.6| Mus musculus chromosome 8, clone RP23-29G4, complete sequence
          Length = 197976

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   agagacatgatgcaagtgaa 268
             ||||||||||||||||||||
Sbjct: 76317 agagacatgatgcaagtgaa 76336
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>emb|Z69838.1|HSV1164A6 Human DNA sequence from clone GHc-1164A6 on chromosome X, complete
             sequence
          Length = 29952

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   tttctttccttttgttgttt 353
             ||||||||||||||||||||
Sbjct: 22685 tttctttccttttgttgttt 22666
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>emb|AL512658.12| Human DNA sequence from clone RP11-518I13 on chromosome 6 Contains a
             novel gene and a CpG island, complete sequence
          Length = 173103

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   caagatttctttccttttgt 348
             ||||||||||||||||||||
Sbjct: 25308 caagatttctttccttttgt 25327
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>emb|AL499605.6| Human DNA sequence from clone RP11-478L17 on chromosome 1, complete
             sequence
          Length = 188350

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   ttctttccttttgttgtttc 354
             ||||||||||||||||||||
Sbjct: 48665 ttctttccttttgttgtttc 48684
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>emb|AL357873.17| Human DNA sequence from clone RP11-344F13 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 143508

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   caagatagagaatctgattg 434
             ||||||||||||||||||||
Sbjct: 85246 caagatagagaatctgattg 85265
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>emb|AL356753.16| Human DNA sequence from clone RP11-481G8 on chromosome 10 Contains the
             5'end of a novel gene containing FLJ40930, gene FLJ35875,
             the RAI17 gene for retinoic acid induced 17, a novel gene
             and two CpG islands, complete sequence
          Length = 183460

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 349   tgtttcagccagaggcagccaggg 372
             |||| |||||||||||||||||||
Sbjct: 83626 tgttgcagccagaggcagccaggg 83649
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>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9
          Length = 159629

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   tttctttccttttgttgttt 353
             ||||||||||||||||||||
Sbjct: 91836 tttctttccttttgttgttt 91817
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>gb|AC156023.2| Mus musculus BAC clone RP23-210I15 from chromosome 16, complete sequence
          Length = 196765

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    agatttctttccttttgttg 350
              ||||||||||||||||||||
Sbjct: 126228 agatttctttccttttgttg 126209
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>emb|BX465857.6| Zebrafish DNA sequence from clone DKEYP-59A12 in linkage group 17,
             complete sequence
          Length = 96394

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 315   ctgtttatttcatgcaagatttctttcc 342
             |||||||||||||||| ||||| |||||
Sbjct: 57343 ctgtttatttcatgcatgatttgtttcc 57370
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>gb|AC069549.5| Homo sapiens chromosome 10 clone RP11-575A19, complete sequence
          Length = 170554

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 374    gcattctccctgttcaaagagaaa 397
              ||||||||| ||||||||||||||
Sbjct: 132063 gcattctccatgttcaaagagaaa 132040
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>gb|AC097512.2| Homo sapiens BAC clone RP11-412P11 from 4, complete sequence
          Length = 149282

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ctggacagcttggttgacaa 201
             ||||||||||||||||||||
Sbjct: 51858 ctggacagcttggttgacaa 51877
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>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0081A17, from chromosome 3, complete sequence
          Length = 134821

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  caaagagaaagtgttgcttc 407
            ||||||||||||||||||||
Sbjct: 5707 caaagagaaagtgttgcttc 5688
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>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0083D24, complete sequence
          Length = 150503

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   caaagagaaagtgttgcttc 407
             ||||||||||||||||||||
Sbjct: 37093 caaagagaaagtgttgcttc 37112
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 320      tatttcatgcaagatttctttcct 343
                |||||||| |||||||||||||||
Sbjct: 24262638 tatttcatccaagatttctttcct 24262615
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 388     caaagagaaagtgttgcttc 407
               ||||||||||||||||||||
Sbjct: 2320361 caaagagaaagtgttgcttc 2320380
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>gb|AC096670.1| Homo sapiens BAC clone RP11-438K19 from 2, complete sequence
          Length = 181497

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   ctttccttttgttgtttcag 356
             ||||||||||||||||||||
Sbjct: 35108 ctttccttttgttgtttcag 35089
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>gb|AF003529.2| Homo sapiens glypican 3 (GPC3) gene, partial cds and flanking repeat
             regions
          Length = 165658

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   gcaagatttctttccttttg 347
             ||||||||||||||||||||
Sbjct: 21999 gcaagatttctttccttttg 21980
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>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0605H02
          Length = 175547

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 320    tatttcatgcaagatttctttcct 343
              |||||||| |||||||||||||||
Sbjct: 128977 tatttcatccaagatttctttcct 128954
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>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0686H11
          Length = 135273

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 320  tatttcatgcaagatttctttcct 343
            |||||||| |||||||||||||||
Sbjct: 2942 tatttcatccaagatttctttcct 2919
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>gb|AC103935.10| Mus musculus chromosome 8, clone RP23-431O7, complete sequence
          Length = 205702

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 128    gcccaggaaaagatggcatccttt 151
              |||| |||||||||||||||||||
Sbjct: 121414 gccctggaaaagatggcatccttt 121437
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>gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, region 23C1-23C5, P1 clones
             DS02190 and DS00906, complete sequence
          Length = 163403

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   ggcagcaagagtcaacatga 173
             ||||||||||||||||||||
Sbjct: 28160 ggcagcaagagtcaacatga 28179
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>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete
              sequence
          Length = 314957

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    ggcagcaagagtcaacatga 173
              ||||||||||||||||||||
Sbjct: 172540 ggcagcaagagtcaacatga 172521
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>gb|U82516.1|DDU82516 Dictyostelium discoideum random slug cDNA22 protein (rsc22) mRNA,
            complete cds
          Length = 2209

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  ctggacagcttggttgacaa 201
            ||||||||||||||||||||
Sbjct: 1958 ctggacagcttggttgacaa 1939
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>emb|AL683854.20| Mouse DNA sequence from clone RP23-237K13 on chromosome 4, complete
              sequence
          Length = 234724

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    tttctttccttttgttgttt 353
              ||||||||||||||||||||
Sbjct: 107364 tttctttccttttgttgttt 107345
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>emb|AJ296303.1|MMU296303 Mus musculus tub gene for tubby protein, exons 1-12
          Length = 163455

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 328  gcaagatttctttccttttg 347
            ||||||||||||||||||||
Sbjct: 6049 gcaagatttctttccttttg 6068
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>emb|AL590327.3|CNS07EG8 Human chromosome 14 DNA sequence Partial sequence from BAC C-2507D9 of
             library CalTech-D from chromosome 14 of Homo sapiens
             (Human), complete sequence
          Length = 59297

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   cagccagaggcagccagggg 373
             ||||||||||||||||||||
Sbjct: 22306 cagccagaggcagccagggg 22287
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>emb|AL772293.7| Mouse DNA sequence from clone RP23-57D24 on chromosome 4, complete
              sequence
          Length = 251930

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    tttctttccttttgttgttt 353
              ||||||||||||||||||||
Sbjct: 216311 tttctttccttttgttgttt 216292


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,997,229
Number of Sequences: 3902068
Number of extensions: 4997229
Number of successful extensions: 108843
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108677
Number of HSP's gapped (non-prelim): 166
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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