| Clone Name | bast73f12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0079P23, complete sequence Length = 125090 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 atcccctccctcccccaacc 180 |||||||||||||||||||| Sbjct: 40831 atcccctccctcccccaacc 40850
>gb|AC125378.3| Mus musculus BAC clone RP23-52N17 from chromosome 5, complete sequence Length = 127270 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agccctaccccaccccaccc 210 |||||||||||||||||||| Sbjct: 3509 agccctaccccaccccaccc 3528
>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219585 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agccctaccccaccccaccc 210 |||||||||||||||||||| Sbjct: 58178 agccctaccccaccccaccc 58159
>gb|AF525299.1| Pseudonocardia autotrophica P-450 gene cluster, partial sequence Length = 4770 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 cgccgatctccgcgccgccg 307 |||||||||||||||||||| Sbjct: 413 cgccgatctccgcgccgccg 394
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cgccgatctccgcgccgccg 307 |||||||||||||||||||| Sbjct: 1088670 cgccgatctccgcgccgccg 1088689
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gatcccctccctcccccaac 179 |||||||||||||||||||| Sbjct: 2589 gatcccctccctcccccaac 2608
>dbj|AK132659.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921508H18 product:unclassifiable, full insert sequence Length = 2124 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 gccgagccctaccccaccccaccc 210 ||||||||| |||||||||||||| Sbjct: 294 gccgagccccaccccaccccaccc 317
>gb|AC109193.16| Mus musculus chromosome 5, clone RP24-352I22, complete sequence Length = 144094 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agccctaccccaccccaccc 210 |||||||||||||||||||| Sbjct: 98422 agccctaccccaccccaccc 98441
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 atcccctccctcccccaacc 180 |||||||||||||||||||| Sbjct: 25102367 atcccctccctcccccaacc 25102386
>gb|AC159372.1| Mus musculus BAC clone RP24-285I4 from chromosome 9, complete sequence Length = 171391 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 gccgagccctaccccaccccaccc 210 ||||||||| |||||||||||||| Sbjct: 126465 gccgagccccaccccaccccaccc 126488
>gb|AC055736.20|AC055736 Homo sapiens 12 BAC RP11-1020M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150902 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agccctaccccaccccaccc 210 |||||||||||||||||||| Sbjct: 14848 agccctaccccaccccaccc 14829
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gatcccctccctcccccaac 179 |||||||||||||||||||| Sbjct: 30250 gatcccctccctcccccaac 30269
>gb|AY827104.1| Pseudonocardia autotrophica BCRC12444 fad gene cluster, partial sequence Length = 4656 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 cgccgatctccgcgccgccg 307 |||||||||||||||||||| Sbjct: 411 cgccgatctccgcgccgccg 392
>gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complete sequence Length = 190949 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ccctaccccaccccacccgc 212 |||||||||||||||||||| Sbjct: 111923 ccctaccccaccccacccgc 111942
>gb|AC155637.4| Mus musculus 10 BAC RP24-227O16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159189 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agccctaccccaccccaccc 210 |||||||||||||||||||| Sbjct: 39206 agccctaccccaccccaccc 39225
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 atcccctccctcccccaacc 180 |||||||||||||||||||| Sbjct: 25413386 atcccctccctcccccaacc 25413405 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,052,635 Number of Sequences: 3902068 Number of extensions: 2052635 Number of successful extensions: 47746 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47642 Number of HSP's gapped (non-prelim): 104 length of query: 309 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 287 effective length of database: 17,147,199,772 effective search space: 4921246334564 effective search space used: 4921246334564 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)