ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast73f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479772.1| Oryza sativa (japonica cultivar-group), mRNA 299 4e-78
2dbj|AK100461.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 4e-78
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
4dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
5ref|NM_189699.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
7dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
8dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
9dbj|AK073282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
10gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete se... 46 0.10
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
12dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
13gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.41
14gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.41
15emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.41
16gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 44 0.41
17ref|XM_465098.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
18gb|AC119626.5| Rattus norvegicus 4 BAC CH230-392O8 (Children's H... 42 1.6
19gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 42 1.6
20dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21dbj|AK105486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
22gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.4
23gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.4
24gb|AC009113.8| Homo sapiens chromosome 16 clone RP11-46C24, comp... 40 6.4
25gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 40 6.4
26gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.4
27gb|U12976.1|PLU12976 Pseudomonas lemoignei polyhydroxyalkanoate ... 40 6.4
28gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.4
29dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, com... 40 6.4
30gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.4
31gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.4
32emb|AL512356.6|CNS07EF5 Human chromosome 14 DNA sequence BAC R-4... 40 6.4 
>ref|XM_479772.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1767

 Score =  299 bits (151), Expect = 4e-78
 Identities = 292/338 (86%), Gaps = 12/338 (3%)
 Strand = Plus / Plus

                                                                       
Query: 108 ggcagcagcaaatcctcctacagcgttgacacatccgctttgtgggactccaagtacacc 167
           ||||||||||| |||||||||||||| ||||| ||| | || ||||| ||||||||||||
Sbjct: 665 ggcagcagcaagtcctcctacagcgtcgacacctccaccttctgggattccaagtacacc 724

                                                                       
Query: 168 caagaatacgccg------aacgccgctctgtggagcggtcgcgagacggcagcagcttc 221
           || || | |||||      | ||||||||  | |||||||||||||||||||||||||||
Sbjct: 725 cacgacttcgccgctgccgaccgccgctccatcgagcggtcgcgagacggcagcagcttc 784

                                                                       
Query: 222 gccgccg---aagactgggacgaccggccgcggacgatagaggagattcaagcgatgctt 278
           |||||||   | ||||||||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 785 gccgccggcgacgactgggacgaccggccgcggacgatagaggagatccaggcgatgctg 844

                                                                       
Query: 279 cagacgaggaaagacgctgcactcaagcgtgagagagctctctcatacgccttctctcac 338
           ||||||||||| ||||| || |||||||||||||| || ||||| ||||||||||| || 
Sbjct: 845 cagacgaggaaggacgccgcgctcaagcgtgagagggcgctctcctacgccttctcccat 904

                                                                       
Query: 339 caaatttggaggaaccccgcgccgtcagtcgaggaagagatggacgtcgacgggcagccg 398
           ||||||||||||||||| |||||||| ||   ||| |||||||||||||| |||||||||
Sbjct: 905 caaatttggaggaacccggcgccgtcggt---ggaggagatggacgtcgatgggcagccg 961

                                                 
Query: 399 cgctgggcggagaggtggacggcgtctcgcgcgtcgtt 436
            | |||||||||||||||| |||||| |||||||||||
Sbjct: 962 aggtgggcggagaggtggatggcgtcgcgcgcgtcgtt 999



 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgacgctgcggtgcatgcaggcgctggtgcgcgtccaggcgcgcgtgcgcgaccagcgga 60
           ||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 546 tgacgctccgctgcatgcaggcgctggtgcgcgtccaggcccgcgtccgcgaccagcgga 605

                           
Query: 61  tgcgactctcccagga 76
           |||| |||||||||||
Sbjct: 606 tgcgcctctcccagga 621
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>dbj|AK100461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091O18, full
           insert sequence
          Length = 1767

 Score =  299 bits (151), Expect = 4e-78
 Identities = 292/338 (86%), Gaps = 12/338 (3%)
 Strand = Plus / Plus

                                                                       
Query: 108 ggcagcagcaaatcctcctacagcgttgacacatccgctttgtgggactccaagtacacc 167
           ||||||||||| |||||||||||||| ||||| ||| | || ||||| ||||||||||||
Sbjct: 665 ggcagcagcaagtcctcctacagcgtcgacacctccaccttctgggattccaagtacacc 724

                                                                       
Query: 168 caagaatacgccg------aacgccgctctgtggagcggtcgcgagacggcagcagcttc 221
           || || | |||||      | ||||||||  | |||||||||||||||||||||||||||
Sbjct: 725 cacgacttcgccgctgccgaccgccgctccatcgagcggtcgcgagacggcagcagcttc 784

                                                                       
Query: 222 gccgccg---aagactgggacgaccggccgcggacgatagaggagattcaagcgatgctt 278
           |||||||   | ||||||||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 785 gccgccggcgacgactgggacgaccggccgcggacgatagaggagatccaggcgatgctg 844

                                                                       
Query: 279 cagacgaggaaagacgctgcactcaagcgtgagagagctctctcatacgccttctctcac 338
           ||||||||||| ||||| || |||||||||||||| || ||||| ||||||||||| || 
Sbjct: 845 cagacgaggaaggacgccgcgctcaagcgtgagagggcgctctcctacgccttctcccat 904

                                                                       
Query: 339 caaatttggaggaaccccgcgccgtcagtcgaggaagagatggacgtcgacgggcagccg 398
           ||||||||||||||||| |||||||| ||   ||| |||||||||||||| |||||||||
Sbjct: 905 caaatttggaggaacccggcgccgtcggt---ggaggagatggacgtcgatgggcagccg 961

                                                 
Query: 399 cgctgggcggagaggtggacggcgtctcgcgcgtcgtt 436
            | |||||||||||||||| |||||| |||||||||||
Sbjct: 962 aggtgggcggagaggtggatggcgtcgcgcgcgtcgtt 999



 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgacgctgcggtgcatgcaggcgctggtgcgcgtccaggcgcgcgtgcgcgaccagcgga 60
           ||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 546 tgacgctccgctgcatgcaggcgctggtgcgcgtccaggcccgcgtccgcgaccagcgga 605

                           
Query: 61  tgcgactctcccagga 76
           |||| |||||||||||
Sbjct: 606 tgcgcctctcccagga 621
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  178 bits (90), Expect = 1e-41
 Identities = 131/144 (90%), Gaps = 3/144 (2%)
 Strand = Plus / Minus

                                                                          
Query: 194    ggagcggtcgcgagacggcagcagcttcgccgccg---aagactgggacgaccggccgcg 250
              |||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||
Sbjct: 790220 ggagcggtcgcgagacggcagcagcttcgccgccggcgacgactgggacgaccggccgcg 790161

                                                                          
Query: 251    gacgatagaggagattcaagcgatgcttcagacgaggaaagacgctgcactcaagcgtga 310
              ||||||||||||||| || |||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 790160 gacgatagaggagatccaggcgatgctgcagacgaggaaggacgccgcgctcaagcgtga 790101

                                      
Query: 311    gagagctctctcatacgccttctc 334
              ||| || ||||| |||||||||||
Sbjct: 790100 gagggcgctctcctacgccttctc 790077



 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgacgctgcggtgcatgcaggcgctggtgcgcgtccaggcgcgcgtgcgcgaccagcgga 60
              ||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 790514 tgacgctccgctgcatgcaggcgctggtgcgcgtccaggcccgcgtccgcgaccagcgga 790455

                              
Query: 61     tgcgactctcccagga 76
              |||| |||||||||||
Sbjct: 790454 tgcgcctctcccagga 790439



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 84/95 (88%), Gaps = 3/95 (3%)
 Strand = Plus / Minus

                                                                          
Query: 342    atttggaggaaccccgcgccgtcagtcgaggaagagatggacgtcgacgggcagccgcgc 401
              |||||||||||||| |||||||| || |||||   |||||||||||| ||||||||| | 
Sbjct: 789984 atttggaggaacccggcgccgtcggtggagga---gatggacgtcgatgggcagccgagg 789928

                                                 
Query: 402    tgggcggagaggtggacggcgtctcgcgcgtcgtt 436
              |||||||||||||||| |||||| |||||||||||
Sbjct: 789927 tgggcggagaggtggatggcgtcgcgcgcgtcgtt 789893



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                          
Query: 108    ggcagcagcaaatcctcctacagcgttgacacatccgctttgtgggactccaagtacacc 167
              ||||||||||| |||||||||||||| ||||| ||| | || ||||| ||||||||||||
Sbjct: 790395 ggcagcagcaagtcctcctacagcgtcgacacctccaccttctgggattccaagtacacc 790336

                
Query: 168    ca 169
              ||
Sbjct: 790335 ca 790334
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>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0427G12
          Length = 185545

 Score =  178 bits (90), Expect = 1e-41
 Identities = 131/144 (90%), Gaps = 3/144 (2%)
 Strand = Plus / Minus

                                                                         
Query: 194   ggagcggtcgcgagacggcagcagcttcgccgccg---aagactgggacgaccggccgcg 250
             |||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||
Sbjct: 89440 ggagcggtcgcgagacggcagcagcttcgccgccggcgacgactgggacgaccggccgcg 89381

                                                                         
Query: 251   gacgatagaggagattcaagcgatgcttcagacgaggaaagacgctgcactcaagcgtga 310
             ||||||||||||||| || |||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 89380 gacgatagaggagatccaggcgatgctgcagacgaggaaggacgccgcgctcaagcgtga 89321

                                     
Query: 311   gagagctctctcatacgccttctc 334
             ||| || ||||| |||||||||||
Sbjct: 89320 gagggcgctctcctacgccttctc 89297



 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                         
Query: 1     tgacgctgcggtgcatgcaggcgctggtgcgcgtccaggcgcgcgtgcgcgaccagcgga 60
             ||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 89734 tgacgctccgctgcatgcaggcgctggtgcgcgtccaggcccgcgtccgcgaccagcgga 89675

                             
Query: 61    tgcgactctcccagga 76
             |||| |||||||||||
Sbjct: 89674 tgcgcctctcccagga 89659



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 84/95 (88%), Gaps = 3/95 (3%)
 Strand = Plus / Minus

                                                                         
Query: 342   atttggaggaaccccgcgccgtcagtcgaggaagagatggacgtcgacgggcagccgcgc 401
             |||||||||||||| |||||||| || |||||   |||||||||||| ||||||||| | 
Sbjct: 89204 atttggaggaacccggcgccgtcggtggagga---gatggacgtcgatgggcagccgagg 89148

                                                
Query: 402   tgggcggagaggtggacggcgtctcgcgcgtcgtt 436
             |||||||||||||||| |||||| |||||||||||
Sbjct: 89147 tgggcggagaggtggatggcgtcgcgcgcgtcgtt 89113



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                         
Query: 108   ggcagcagcaaatcctcctacagcgttgacacatccgctttgtgggactccaagtacacc 167
             ||||||||||| |||||||||||||| ||||| ||| | || ||||| ||||||||||||
Sbjct: 89615 ggcagcagcaagtcctcctacagcgtcgacacctccaccttctgggattccaagtacacc 89556

               
Query: 168   ca 169
             ||
Sbjct: 89555 ca 89554
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>ref|NM_189699.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1329

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 1   tgacgctgcggtgcatgcaggcgctggtgcgcgtccaggcgcgc 44
           |||||||||||||||||||||||||||| || || |||||||||
Sbjct: 455 tgacgctgcggtgcatgcaggcgctggtccgggtgcaggcgcgc 498
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                           
Query: 1       tgacgctgcggtgcatgcaggcgctggtgcgcgtccaggcgcgc 44
               |||||||||||||||||||||||||||| || || |||||||||
Sbjct: 5053571 tgacgctgcggtgcatgcaggcgctggtccgggtgcaggcgcgc 5053528
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>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0001B06
          Length = 140304

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 1     tgacgctgcggtgcatgcaggcgctggtgcgcgtccaggcgcgc 44
             |||||||||||||||||||||||||||| || || |||||||||
Sbjct: 47009 tgacgctgcggtgcatgcaggcgctggtccgggtgcaggcgcgc 46966
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>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0671B11
          Length = 168372

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 1      tgacgctgcggtgcatgcaggcgctggtgcgcgtccaggcgcgc 44
              |||||||||||||||||||||||||||| || || |||||||||
Sbjct: 154024 tgacgctgcggtgcatgcaggcgctggtccgggtgcaggcgcgc 153981
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>dbj|AK073282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027F11, full
           insert sequence
          Length = 1705

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 1   tgacgctgcggtgcatgcaggcgctggtgcgcgtccaggcgcgc 44
           |||||||||||||||||||||||||||| || || |||||||||
Sbjct: 574 tgacgctgcggtgcatgcaggcgctggtccgggtgcaggcgcgc 617
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>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence
          Length = 35427

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 85    ccgccgccggtgcggctggctgtggcagcag 115
             ||||||||||||||| ||| |||||||||||
Sbjct: 17514 ccgccgccggtgcgggtggttgtggcagcag 17484
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                           
Query: 105     tgtggcagcagcaaatcctcctacagcgttgacacatccgctttgtgggactccaagtac 164
               ||||| |||||||| || ||||||| ||||||||| ||| | |  | |||||||||||||
Sbjct: 8399940 tgtggtagcagcaagtcttcctacaacgttgacacctccacctactaggactccaagtac 8399881

                  
Query: 165     acc 167
               |||
Sbjct: 8399880 acc 8399878



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 7        tgcggtgcatgcaggcgctggtgcgcgtccaggcgcgcgtgcgcg 51
                |||| |||||||||||||| || |||| |||||| ||||| ||||
Sbjct: 11481945 tgcgctgcatgcaggcgctcgtccgcgcccaggcccgcgtccgcg 11481989
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>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0011N12
          Length = 158586

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                         
Query: 105   tgtggcagcagcaaatcctcctacagcgttgacacatccgctttgtgggactccaagtac 164
             ||||| |||||||| || ||||||| ||||||||| ||| | |  | |||||||||||||
Sbjct: 52790 tgtggtagcagcaagtcttcctacaacgttgacacctccacctactaggactccaagtac 52731

                
Query: 165   acc 167
             |||
Sbjct: 52730 acc 52728
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 207     gacggcagcagcttcgccgccg 228
               ||||||||||||||||||||||
Sbjct: 1896677 gacggcagcagcttcgccgccg 1896656
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 207     gacggcagcagcttcgccgccg 228
               ||||||||||||||||||||||
Sbjct: 1533219 gacggcagcagcttcgccgccg 1533240
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 207     gacggcagcagcttcgccgccg 228
               ||||||||||||||||||||||
Sbjct: 1420307 gacggcagcagcttcgccgccg 1420328
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 387    gacgggcagccgcgctgggcgg 408
              ||||||||||||||||||||||
Sbjct: 216049 gacgggcagccgcgctgggcgg 216028
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>ref|XM_465098.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1605

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 7   tgcggtgcatgcaggcgctggtgcgcgtccaggcgcgcgtgcgcg 51
           |||| |||||||||||||| || |||| |||||| ||||| ||||
Sbjct: 558 tgcgctgcatgcaggcgctcgtccgcgcccaggcccgcgtccgcg 602
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>gb|AC119626.5| Rattus norvegicus 4 BAC CH230-392O8 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 78522

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 316   ctctctcatacgccttctctc 336
             |||||||||||||||||||||
Sbjct: 57728 ctctctcatacgccttctctc 57748
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 395     gccgcgctgggcggagaggtg 415
               |||||||||||||||||||||
Sbjct: 2591309 gccgcgctgggcggagaggtg 2591329
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>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0030M21
          Length = 155970

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 7     tgcggtgcatgcaggcgctggtgcgcgtccaggcgcgcgtgcgcg 51
             |||| |||||||||||||| || |||| |||||| ||||| ||||
Sbjct: 64437 tgcgctgcatgcaggcgctcgtccgcgcccaggcccgcgtccgcg 64481
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>dbj|AK105486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B08, full
           insert sequence
          Length = 1605

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 7   tgcggtgcatgcaggcgctggtgcgcgtccaggcgcgcgtgcgcg 51
           |||| |||||||||||||| || |||| |||||| ||||| ||||
Sbjct: 558 tgcgctgcatgcaggcgctcgtccgcgcccaggcccgcgtccgcg 602
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    ttcgccgccgaagactggga 238
              ||||||||||||||||||||
Sbjct: 223742 ttcgccgccgaagactggga 223761
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 381    gacgtcgacgggcagccgcg 400
              ||||||||||||||||||||
Sbjct: 679133 gacgtcgacgggcagccgcg 679152
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>gb|AC009113.8| Homo sapiens chromosome 16 clone RP11-46C24, complete sequence
          Length = 138740

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    ggctgtggcagcagcaaatc 121
              ||||||||||||||||||||
Sbjct: 126891 ggctgtggcagcagcaaatc 126910
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>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    gcgcgtccaggcgcgcgtgc 48
             ||||||||||||||||||||
Sbjct: 74980 gcgcgtccaggcgcgcgtgc 74999
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      gtccgccgccggtgcggctg 102
               ||||||||||||||||||||
Sbjct: 3209870 gtccgccgccggtgcggctg 3209851
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>gb|U12976.1|PLU12976 Pseudomonas lemoignei polyhydroxyalkanoate depolymerase precursor
          (phaZ4) gene, complete cds
          Length = 3109

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 34 tccaggcgcgcgtgcgcgac 53
          ||||||||||||||||||||
Sbjct: 4  tccaggcgcgcgtgcgcgac 23
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 35      ccaggcgcgcgtgcgcgaccagcg 58
               ||||||||||||||||| ||||||
Sbjct: 2077078 ccaggcgcgcgtgcgcgcccagcg 2077055
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>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence
          Length = 106873

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    gcgcgtccaggcgcgcgtgc 48
             ||||||||||||||||||||
Sbjct: 65892 gcgcgtccaggcgcgcgtgc 65911
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 81      ctgtccgccgccggtgcggc 100
               ||||||||||||||||||||
Sbjct: 2120788 ctgtccgccgccggtgcggc 2120807
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     gacggcagcagcttcgccgc 226
               ||||||||||||||||||||
Sbjct: 1226182 gacggcagcagcttcgccgc 1226201
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>emb|AL512356.6|CNS07EF5 Human chromosome 14 DNA sequence BAC R-44N21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158467

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    ctcccaggagtccctgtccg 87
             ||||||||||||||||||||
Sbjct: 50594 ctcccaggagtccctgtccg 50613


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,920,437
Number of Sequences: 3902068
Number of extensions: 2920437
Number of successful extensions: 58469
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 57041
Number of HSP's gapped (non-prelim): 1422
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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