>YFAS_ECOLI (P76464) Hypothetical UPF0192 protein yfaS precursor|
          Length = 1534

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = -2

Query: 448  GALLMPFLMAWTXSRFTTAPLSSVPSAAPNGDDNGDETGTMESSPASRLLVVDIPALRIS 269
            G+ L+P  +AW         L+   SAA N      +   M      RL+ +  P  R +
Sbjct: 1074 GSRLIPLSLAWRS-------LADHQSAAAN------DIRQMIQDNRLRLMQLAGPGARFT 1120

Query: 268  WWREEGEG 245
            WW E+G G
Sbjct: 1121 WWGEDGNG 1128

>YFAS_ECO57 (Q8XE35) Hypothetical UPF0192 protein yfaS precursor|
          Length = 1534

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = -2

Query: 448  GALLMPFLMAWTXSRFTTAPLSSVPSAAPNGDDNGDETGTMESSPASRLLVVDIPALRIS 269
            G+ L+P  +AW         L+   SAA N      +   M      RL+ +  P  R +
Sbjct: 1074 GSRLIPLSLAWRS-------LADHQSAAAN------DIRQMIQDNRLRLMQLAGPGARFT 1120

Query: 268  WWREEGEG 245
            WW E+G G
Sbjct: 1121 WWGEDGNG 1128

>PELD_ERWCH (P18209) Pectate lyase D precursor (EC 4.2.2.2)|
          Length = 391

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -2

Query: 466 ATDSLLGALLMPFLMAWTXSRFTTAPLSSVPSAAPNGDDNGDETGTMESSPASRLLVVDI 287
           +T SLL A++   +M W+ +R T     +  +A+      G  TG  +++ A    V +I
Sbjct: 10  STKSLLAAIIATSMMTWSVNRATLQTTKATEAASTGWATQGGTTGGAKAASAKIYAVKNI 69

>SYFB_RICTY (Q68WW1) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 815

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 246 PSPSSLHQLIRNAGISTTRSLL 311
           PSPS L QL++N GI T  SL+
Sbjct: 228 PSPSWLQQLLKNVGIKTISSLV 249

>MUC1_MOUSE (Q02496) Mucin-1 precursor (Polymorphic epithelial mucin) (PEMT)|
           (Episialin)
          Length = 630

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
 Frame = -2

Query: 466 ATDSLLGALLMPFLMAWTXSRFTTAPLSSV-----------PSAAPNGDDNGDETGTMES 320
           AT  L  +   P + + T S  TTAP+ S            P+ +P GD       +  S
Sbjct: 117 ATSPLKDSNSSPVVHSGTSSAATTAPVDSTSSPVVHGGTSSPATSPPGDSTSSPDHSSTS 176

Query: 319 SPASR 305
           SPA+R
Sbjct: 177 SPATR 181

>CRM_DROME (O76906) Protein cramped|
          Length = 982

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -2

Query: 385 SSVPSAAPNGDDNGDETGTMESSPAS 308
           SS+PSAA N ++N +ET  ++ S AS
Sbjct: 322 SSLPSAASNNNNNNNETEPLQPSVAS 347

>CHEB1_SHEON (Q8ECD7) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 1 operon (EC 3.1.1.61)
          Length = 374

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 219 DILRPAAVAPSPSSLHQLIRNAGISTTRSLLAGDDSM 329
           DILRP     +P  +  ++  AG++    +LAG   M
Sbjct: 248 DILRPGCAYLAPGGMQMMVERAGVTGRIKVLAGSAEM 284


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,288,791
Number of Sequences: 219361
Number of extensions: 481633
Number of successful extensions: 1603
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1603
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)