>ref|NM_192797.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 858

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 267 cagctgatccgcaacgctgggatatcgaccacgaggagcctgcttgc 313
           |||||||||||||| ||||| ||||| ||||| |||| |||||||||
Sbjct: 214 cagctgatccgcaatgctggaatatctaccacaaggaacctgcttgc 260



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 55/63 (87%), Gaps = 2/63 (3%)
 Strand = Plus / Plus

                                                                       
Query: 402 aagcggctcanagtccaggccatcaagaagggcatca-gcagagccccaagaa-gtgaat 459
           |||||||| |  ||||| |||||||||||||  |||| ||||||||||||||| ||||||
Sbjct: 349 aagcggctgaaggtccaagccatcaagaaggatatcaagcagagccccaagaaggtgaat 408

              
Query: 460 ctg 462
           |||
Sbjct: 409 ctg 411

>dbj|AK073157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012O14, full
           insert sequence
          Length = 1196

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 267 cagctgatccgcaacgctgggatatcgaccacgaggagcctgcttgc 313
           |||||||||||||| ||||| ||||| ||||| |||| |||||||||
Sbjct: 338 cagctgatccgcaatgctggaatatctaccacaaggaacctgcttgc 384



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 55/63 (87%), Gaps = 2/63 (3%)
 Strand = Plus / Plus

                                                                       
Query: 402 aagcggctcanagtccaggccatcaagaagggcatca-gcagagccccaagaa-gtgaat 459
           |||||||| |  ||||| |||||||||||||  |||| ||||||||||||||| ||||||
Sbjct: 473 aagcggctgaaggtccaagccatcaagaaggatatcaagcagagccccaagaaggtgaat 532

              
Query: 460 ctg 462
           |||
Sbjct: 533 ctg 535

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 207    gcggcgctgatcgacatcctgcgc 230
              ||||||||||||||||||||||||
Sbjct: 989042 gcggcgctgatcgacatcctgcgc 989065

>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0056I11, complete sequence
          Length = 145796

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 189   cgcggcggccgcgccccggcggcgc 213
             ||||| |||||||||||||||||||
Sbjct: 55458 cgcggaggccgcgccccggcggcgc 55482

>gb|AC108451.9| Homo sapiens chromosome 15, clone RP11-379K22, complete sequence
          Length = 198707

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 422   catcaagaagggcatcagcag 442
             |||||||||||||||||||||
Sbjct: 19155 catcaagaagggcatcagcag 19175

>gb|AC016705.4|AC016705 Homo sapiens BAC clone RP11-210M15 from 15, complete sequence
          Length = 177964

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 422    catcaagaagggcatcagcag 442
              |||||||||||||||||||||
Sbjct: 143280 catcaagaagggcatcagcag 143300

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 189     cgcggcggccgcgccccggcggcgc 213
               ||||| |||||||||||||||||||
Sbjct: 1603298 cgcggaggccgcgccccggcggcgc 1603322

>gb|AC154444.2| Mus musculus BAC clone RP24-179H6 from chromosome 13, complete sequence
          Length = 150924

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 448    caagaagtgaatctgtagcca 468
              |||||||||||||||||||||
Sbjct: 103225 caagaagtgaatctgtagcca 103245

>dbj|AK105767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E04, full
            insert sequence
          Length = 2037

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 189  cgcggcggccgcgccccggcggcgc 213
            ||||| |||||||||||||||||||
Sbjct: 1676 cgcggaggccgcgccccggcggcgc 1700

>gb|AC145888.3| Pan troglodytes BAC clone RP43-40H8 from 7, complete sequence
          Length = 163342

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    agaagtgaatctgtagccag 469
              ||||||||||||||||||||
Sbjct: 106974 agaagtgaatctgtagccag 106955

>gb|AC004022.1| Homo sapiens BAC clone GS1-155M11 from 7, complete sequence
          Length = 116552

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   agaagtgaatctgtagccag 469
             ||||||||||||||||||||
Sbjct: 68863 agaagtgaatctgtagccag 68882

>emb|X63461.1|RCCCL12 R.capsulatus genes ccl1 and ccl2
          Length = 3155

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 196  gccgcgccccggcggcgctg 215
            ||||||||||||||||||||
Sbjct: 2465 gccgcgccccggcggcgctg 2446

>gb|AF539592.1| Homo sapiens paraoxonase 1 (PON1) gene, complete cds
          Length = 29370

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  agaagtgaatctgtagccag 469
            ||||||||||||||||||||
Sbjct: 2183 agaagtgaatctgtagccag 2164

>gb|AC107222.6| Homo sapiens BAC clone RP11-616K6 from 4, complete sequence
          Length = 111550

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    cccatttctctcctccttcc 35
             ||||||||||||||||||||
Sbjct: 73570 cccatttctctcctccttcc 73589

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 353     gtcgccgttgggtgccgcgg 372
               ||||||||||||||||||||
Sbjct: 7948726 gtcgccgttgggtgccgcgg 7948707

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 191     cggcggccgcgccccggcgg 210
               ||||||||||||||||||||
Sbjct: 4664799 cggcggccgcgccccggcgg 4664780

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    cgcggcggccgcgccccggc 208
              ||||||||||||||||||||
Sbjct: 545416 cgcggcggccgcgccccggc 545435

>gb|AC011519.7|AC011519 Homo sapiens chromosome 19 clone LLNLF-192H5, complete sequence
          Length = 43310

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 454   gtgaatctgtagccagctgg 473
             ||||||||||||||||||||
Sbjct: 17428 gtgaatctgtagccagctgg 17447

>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0082C09
          Length = 160665

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   gtcgccgttgggtgccgcgg 372
             ||||||||||||||||||||
Sbjct: 72141 gtcgccgttgggtgccgcgg 72122

>gb|AE005120.1| Halobacterium sp. NRC-1 section 151 of 170 of the complete genome
          Length = 10179

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 190  gcggcggccgcgccccggcg 209
            ||||||||||||||||||||
Sbjct: 4371 gcggcggccgcgccccggcg 4390

>emb|BX004973.10| Mouse DNA sequence from clone RP24-260G16 on chromosome 2, complete
             sequence
          Length = 114815

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tccccatttctctcctcctt 33
             ||||||||||||||||||||
Sbjct: 39852 tccccatttctctcctcctt 39833

>dbj|AK104645.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G11, full
           insert sequence
          Length = 1228

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 gtcgccgttgggtgccgcgg 372
           ||||||||||||||||||||
Sbjct: 867 gtcgccgttgggtgccgcgg 848

>dbj|AK067000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I12, full
           insert sequence
          Length = 1239

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 gtcgccgttgggtgccgcgg 372
           ||||||||||||||||||||
Sbjct: 867 gtcgccgttgggtgccgcgg 848

>tpe|BN000558.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx29 gene for
           class III peroxidase 29 precursor, exons 1-3
          Length = 1184

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 gtcgccgttgggtgccgcgg 372
           ||||||||||||||||||||
Sbjct: 920 gtcgccgttgggtgccgcgg 901

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   gcgctgatcgacatcctgcg 229
             ||||||||||||||||||||
Sbjct: 61019 gcgctgatcgacatcctgcg 61000

>gb|U55877.1|HSPON1EX1 Human paraoxonase (PON1) gene, exon 1
          Length = 1334

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 450 agaagtgaatctgtagccag 469
           ||||||||||||||||||||
Sbjct: 709 agaagtgaatctgtagccag 690


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,267,748
Number of Sequences: 3902068
Number of extensions: 2267748
Number of successful extensions: 49769
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48889
Number of HSP's gapped (non-prelim): 878
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)