ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast73f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Vol... 99 7e-21
2VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin ... 98 9e-21
3VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein... 95 8e-20
4VDAC_PEA (P42054) Outer plastidial membrane protein porin (Volta... 92 5e-19
5VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin ... 90 3e-18
6VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein... 87 2e-17
7VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin ... 82 5e-16
8VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin ... 79 7e-15
9CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel al... 30 4.0
10SRPK1_HUMAN (Q96SB4) Serine/threonine-protein kinase SRPK1 (EC 2... 29 6.8
11VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (P... 28 8.9

>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 277

 Score = 98.6 bits (244), Expect = 7e-21
 Identities = 53/126 (42%), Positives = 65/126 (51%)
 Frame = +2

Query: 77  LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256
           LY DI KK RDLL +DY                       +KNE+I  +L TQ+K K  T
Sbjct: 7   LYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLT 66

Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436
           VDVKA             E   PGLK +++L  P Q+S  GK E QYLH + G+N SVGL
Sbjct: 67  VDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRS--GKLEFQYLHEYAGVNASVGL 124

Query: 437 NPNPLV 454
           N NP+V
Sbjct: 125 NSNPMV 130



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>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score = 98.2 bits (243), Expect = 9e-21
 Identities = 53/126 (42%), Positives = 66/126 (52%)
 Frame = +2

Query: 77  LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256
           LY+ I KKA+DLL RDY                       KK +  + ++Q+Q+K KN T
Sbjct: 6   LYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNIT 65

Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436
           VDVKA             +L  PGLK +LS   P QKS  GK ELQYLH + GIN S+GL
Sbjct: 66  VDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKS--GKVELQYLHDYAGINASIGL 123

Query: 437 NPNPLV 454
             NP+V
Sbjct: 124 TANPVV 129



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>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 36)
          Length = 275

 Score = 95.1 bits (235), Expect = 8e-20
 Identities = 56/128 (43%), Positives = 64/128 (50%)
 Frame = +2

Query: 77  LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256
           LY+DI KKARDLL RDY                       KK E  L+D+ TQ+K KN T
Sbjct: 6   LYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNIT 65

Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436
            DVK              E   PGLK + S   P QKS  GK ELQYLH + GIN S+GL
Sbjct: 66  TDVKVDTNSNVYTTITVDEPA-PGLKTIFSFVVPDQKS--GKVELQYLHEYAGINTSIGL 122

Query: 437 NPNPLVTF 460
             +PLV F
Sbjct: 123 TASPLVNF 130



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>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 275

 Score = 92.4 bits (228), Expect = 5e-19
 Identities = 53/128 (41%), Positives = 62/128 (48%)
 Frame = +2

Query: 77  LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256
           LY DI KKARDLL +DY                       KK E  L D+ TQ+K KN T
Sbjct: 6   LYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNIT 65

Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436
            D+K              E   PG+K +LS   P Q  T GK ELQYLH + GI+ SVGL
Sbjct: 66  TDIKVDTNSNLFTTITVNEPA-PGVKAILSFKVPEQ--TSGKVELQYLHEYAGISSSVGL 122

Query: 437 NPNPLVTF 460
             NP+V F
Sbjct: 123 KANPIVNF 130



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>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 273

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 51/126 (40%), Positives = 65/126 (51%)
 Frame = +2

Query: 77  LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256
           LY +I KKARDLL RDY                       KK + I  ++Q+Q+K KN T
Sbjct: 5   LYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNIT 64

Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436
           VDVKA             EL  PGLK +LS   P Q+S  GK ELQY H + G++ S+GL
Sbjct: 65  VDVKANSDSNVVTTVTVDEL-TPGLKSILSFAVPDQRS--GKFELQYSHDYAGVSASIGL 121

Query: 437 NPNPLV 454
             +P+V
Sbjct: 122 TASPVV 127



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>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 34)
          Length = 275

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 51/128 (39%), Positives = 63/128 (49%)
 Frame = +2

Query: 77  LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256
           LY +I KKARDLL +DY                       KK +  L+D+ TQ+K KN T
Sbjct: 6   LYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVT 65

Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436
            D+K              E   PGLK +LS   P Q+S  GK E+QYLH + GI  SVGL
Sbjct: 66  TDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVPDQRS--GKLEVQYLHDYAGICTSVGL 122

Query: 437 NPNPLVTF 460
             NP+V F
Sbjct: 123 TANPIVNF 130



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>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 273

 Score = 82.4 bits (202), Expect = 5e-16
 Identities = 49/128 (38%), Positives = 57/128 (44%)
 Frame = +2

Query: 77  LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256
           LY +I KKARDLL RDY                        K    L D+ TQVK  NFT
Sbjct: 6   LYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFT 65

Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436
            DVK              E   PGLK ++    P  KS  GKAE+QY H + GI+ SVG 
Sbjct: 66  ADVKVSTDSSLLTTLTFDEPA-PGLKVIVQAKLPDHKS--GKAEVQYFHDYAGISTSVGF 122

Query: 437 NPNPLVTF 460
              P+V F
Sbjct: 123 TATPIVNF 130



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>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1|
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 275

 Score = 78.6 bits (192), Expect = 7e-15
 Identities = 46/128 (35%), Positives = 59/128 (46%)
 Frame = +2

Query: 77  LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256
           LY +I KKARDLL +D+                       KK + +L D+  Q + KN T
Sbjct: 6   LYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNIT 65

Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436
            D+K              E   PGL+ + S   P Q S  GK ELQYLH + GI+ S+GL
Sbjct: 66  TDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVPDQNS--GKVELQYLHEYAGISTSMGL 122

Query: 437 NPNPLVTF 460
             NP V F
Sbjct: 123 TQNPTVNF 130



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>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.2)
           (Low-voltage-activated calcium channel alpha1 3.2
           subunit)
          Length = 2353

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = +1

Query: 100 GQRSPQQGLHHGPEVHL-YHHRRQRSHNY*FKHKEK*SYLERP-PDPG 237
           G R  + G H     HL YHH     H+Y F H        RP P+PG
Sbjct: 501 GHRQRRAGRHTASVHHLVYHHHHHHHHHYHFSHGSP----RRPGPEPG 544



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>SRPK1_HUMAN (Q96SB4) Serine/threonine-protein kinase SRPK1 (EC 2.7.11.1)|
           (Serine/arginine-rich protein-specific kinase 1)
           (SR-protein-specific kinase 1) (SFRS protein kinase 1)
          Length = 826

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 350 PFPYQKSTPGKAELQYLHPHLG--INGSVGLNPN 445
           P P Q   PG A L  LHPHLG  ++ +  L+P+
Sbjct: 138 PPPRQAPQPGLAPLLGLHPHLGRLLSSTFALHPS 171



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>VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (Porin) (DmVDAC)|
          Length = 281

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 7/132 (5%)
 Frame = +2

Query: 80  YADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNE---AILSDLQTQVKIKN 250
           Y+D+ K+ARD+ ++ Y                         N+    +   L+T+ K+K+
Sbjct: 5   YSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYKVKD 64

Query: 251 F--TVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPF-PYQKSTPGKAELQYLHPHLGIN 421
           +  T+  K              +    GLK  L   F P   +  GK ++ Y H ++  +
Sbjct: 65  YGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKAD 124

Query: 422 GSVGLN-PNPLV 454
             V ++   PL+
Sbjct: 125 SDVNIDLKGPLI 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,927,920
Number of Sequences: 219361
Number of extensions: 922572
Number of successful extensions: 2430
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2391
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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