| Clone Name | bast73f06 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 98.6 bits (244), Expect = 7e-21 Identities = 53/126 (42%), Positives = 65/126 (51%) Frame = +2 Query: 77 LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256 LY DI KK RDLL +DY +KNE+I +L TQ+K K T Sbjct: 7 LYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLT 66 Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436 VDVKA E PGLK +++L P Q+S GK E QYLH + G+N SVGL Sbjct: 67 VDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRS--GKLEFQYLHEYAGVNASVGL 124 Query: 437 NPNPLV 454 N NP+V Sbjct: 125 NSNPMV 130
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 98.2 bits (243), Expect = 9e-21 Identities = 53/126 (42%), Positives = 66/126 (52%) Frame = +2 Query: 77 LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256 LY+ I KKA+DLL RDY KK + + ++Q+Q+K KN T Sbjct: 6 LYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNIT 65 Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436 VDVKA +L PGLK +LS P QKS GK ELQYLH + GIN S+GL Sbjct: 66 VDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKS--GKVELQYLHDYAGINASIGL 123 Query: 437 NPNPLV 454 NP+V Sbjct: 124 TANPVV 129
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 95.1 bits (235), Expect = 8e-20 Identities = 56/128 (43%), Positives = 64/128 (50%) Frame = +2 Query: 77 LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256 LY+DI KKARDLL RDY KK E L+D+ TQ+K KN T Sbjct: 6 LYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNIT 65 Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436 DVK E PGLK + S P QKS GK ELQYLH + GIN S+GL Sbjct: 66 TDVKVDTNSNVYTTITVDEPA-PGLKTIFSFVVPDQKS--GKVELQYLHEYAGINTSIGL 122 Query: 437 NPNPLVTF 460 +PLV F Sbjct: 123 TASPLVNF 130
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 92.4 bits (228), Expect = 5e-19 Identities = 53/128 (41%), Positives = 62/128 (48%) Frame = +2 Query: 77 LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256 LY DI KKARDLL +DY KK E L D+ TQ+K KN T Sbjct: 6 LYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNIT 65 Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436 D+K E PG+K +LS P Q T GK ELQYLH + GI+ SVGL Sbjct: 66 TDIKVDTNSNLFTTITVNEPA-PGVKAILSFKVPEQ--TSGKVELQYLHEYAGISSSVGL 122 Query: 437 NPNPLVTF 460 NP+V F Sbjct: 123 KANPIVNF 130
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 89.7 bits (221), Expect = 3e-18 Identities = 51/126 (40%), Positives = 65/126 (51%) Frame = +2 Query: 77 LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256 LY +I KKARDLL RDY KK + I ++Q+Q+K KN T Sbjct: 5 LYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNIT 64 Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436 VDVKA EL PGLK +LS P Q+S GK ELQY H + G++ S+GL Sbjct: 65 VDVKANSDSNVVTTVTVDEL-TPGLKSILSFAVPDQRS--GKFELQYSHDYAGVSASIGL 121 Query: 437 NPNPLV 454 +P+V Sbjct: 122 TASPVV 127
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 87.0 bits (214), Expect = 2e-17 Identities = 51/128 (39%), Positives = 63/128 (49%) Frame = +2 Query: 77 LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256 LY +I KKARDLL +DY KK + L+D+ TQ+K KN T Sbjct: 6 LYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVT 65 Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436 D+K E PGLK +LS P Q+S GK E+QYLH + GI SVGL Sbjct: 66 TDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVPDQRS--GKLEVQYLHDYAGICTSVGL 122 Query: 437 NPNPLVTF 460 NP+V F Sbjct: 123 TANPIVNF 130
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 82.4 bits (202), Expect = 5e-16 Identities = 49/128 (38%), Positives = 57/128 (44%) Frame = +2 Query: 77 LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256 LY +I KKARDLL RDY K L D+ TQVK NFT Sbjct: 6 LYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFT 65 Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436 DVK E PGLK ++ P KS GKAE+QY H + GI+ SVG Sbjct: 66 ADVKVSTDSSLLTTLTFDEPA-PGLKVIVQAKLPDHKS--GKAEVQYFHDYAGISTSVGF 122 Query: 437 NPNPLVTF 460 P+V F Sbjct: 123 TATPIVNF 130
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 78.6 bits (192), Expect = 7e-15 Identities = 46/128 (35%), Positives = 59/128 (46%) Frame = +2 Query: 77 LYADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKNFT 256 LY +I KKARDLL +D+ KK + +L D+ Q + KN T Sbjct: 6 LYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNIT 65 Query: 257 VDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGL 436 D+K E PGL+ + S P Q S GK ELQYLH + GI+ S+GL Sbjct: 66 TDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVPDQNS--GKVELQYLHEYAGISTSMGL 122 Query: 437 NPNPLVTF 460 NP V F Sbjct: 123 TQNPTVNF 130
>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) (Low-voltage-activated calcium channel alpha1 3.2 subunit) Length = 2353 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = +1 Query: 100 GQRSPQQGLHHGPEVHL-YHHRRQRSHNY*FKHKEK*SYLERP-PDPG 237 G R + G H HL YHH H+Y F H RP P+PG Sbjct: 501 GHRQRRAGRHTASVHHLVYHHHHHHHHHYHFSHGSP----RRPGPEPG 544
>SRPK1_HUMAN (Q96SB4) Serine/threonine-protein kinase SRPK1 (EC 2.7.11.1)| (Serine/arginine-rich protein-specific kinase 1) (SR-protein-specific kinase 1) (SFRS protein kinase 1) Length = 826 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +2 Query: 350 PFPYQKSTPGKAELQYLHPHLG--INGSVGLNPN 445 P P Q PG A L LHPHLG ++ + L+P+ Sbjct: 138 PPPRQAPQPGLAPLLGLHPHLGRLLSSTFALHPS 171
>VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (Porin) (DmVDAC)| Length = 281 Score = 28.5 bits (62), Expect = 8.9 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 7/132 (5%) Frame = +2 Query: 80 YADIDKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNE---AILSDLQTQVKIKN 250 Y+D+ K+ARD+ ++ Y N+ + L+T+ K+K+ Sbjct: 5 YSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYKVKD 64 Query: 251 F--TVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPF-PYQKSTPGKAELQYLHPHLGIN 421 + T+ K + GLK L F P + GK ++ Y H ++ + Sbjct: 65 YGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKAD 124 Query: 422 GSVGLN-PNPLV 454 V ++ PL+ Sbjct: 125 SDVNIDLKGPLI 136 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,927,920 Number of Sequences: 219361 Number of extensions: 922572 Number of successful extensions: 2430 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2391 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)