ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast73e11 |
|---|---|
| Clone Library Name | barley_pub |
>YGX0_YEAST (P53082) Protein YGL220w| Length = 120 Score = 61.2 bits (147), Expect = 1e-09 Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 1/89 (1%) Frame = +3 Query: 33 RETKRRGRQSSAAMGVTKEDVEAAVAAALSPT-HLVVTDTSGGCGASYEIEVVSGKFEGK 209 RETKR Q M VT++ + + +A+ H++VTD S GCG S++I VVS F+GK Sbjct: 26 RETKR---QRHYKMPVTEQGLRERIESAIPQVYHIIVTDLSYGCGQSFDIVVVSDFFQGK 82 Query: 210 RLLERHRMVNTALAPLMAENHAVSIKALT 296 L R R VN A+ + E HA S K T Sbjct: 83 SKLMRSRAVNKAVKEELQEIHAFSCKCYT 111
>BOLA2_HUMAN (Q9H3K6) BolA-like protein 2| Length = 86 Score = 54.3 bits (129), Expect = 1e-07 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Frame = +3 Query: 72 MGVTKEDVEAAVAAALSPTHLVVTDTS-GGCGASYEIEVVSGKFEGKRLLERHRMVNTAL 248 M ++ E + + L H+ V DT+ C S+ + VVS KFEGK LL+RHR+VN L Sbjct: 1 MELSAEYLREKLQRDLEAEHVEVEDTTLNRCSCSFRVLVVSAKFEGKPLLQRHRLVNACL 60 Query: 249 APLMAENHAVSIKALT 296 A + HA K LT Sbjct: 61 AEELPHIHAFEQKTLT 76
>BOLA2_MOUSE (Q8BGS2) BolA-like protein 2| Length = 86 Score = 53.1 bits (126), Expect = 3e-07 Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Frame = +3 Query: 117 LSPTHLVVTDTS-GGCGASYEIEVVSGKFEGKRLLERHRMVNTALAPLMAENHAVSIKAL 293 L H+ V DT+ C S+ + VVS KFEGK LL+RHR+VN LA + HA K L Sbjct: 16 LEAEHVEVEDTTLNRCATSFRVLVVSAKFEGKPLLQRHRLVNECLAEELPHIHAFEQKTL 75 Query: 294 T 296 T Sbjct: 76 T 76
>BOLA1_MOUSE (Q9D8S9) BolA-like protein 1| Length = 137 Score = 51.6 bits (122), Expect = 1e-06 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 7/95 (7%) Frame = +3 Query: 33 RETKRRGRQSSAAMGVTKEDVEAAVAAALSPTHLVVTDTSGGCGAS------YEIEVVSG 194 R RG SAA G + + A + ALSP L + + SGG + + VVS Sbjct: 16 RSCVSRGSAGSAAAGPVEAAIRAKLEQALSPEVLELRNESGGHAVPAGSETHFRVAVVSS 75 Query: 195 KFEGKRLLERHRMVNTALA-PLMAENHAVSIKALT 296 +FEG L+RHR+V+ AL+ L HA++I+A T Sbjct: 76 RFEGMSPLQRHRLVHEALSEELAGPVHALAIQAKT 110
>YN1I_CAEEL (P91375) Hypothetical bolA-like protein K11H12.1 in chromosome IV| Length = 108 Score = 50.4 bits (119), Expect = 2e-06 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 7/85 (8%) Frame = +3 Query: 60 SSAAMGVTKEDVEAAVAAALSPTHLVVTDTSG------GCGASYEIEVVSGKFEGKRLLE 221 S+ + G ++ + AA P HL V S G + ++VVS +FEGKR++E Sbjct: 2 STLSEGPVARLLKEKLFAAFQPKHLEVECESHLHNVPKGAEKHFRVQVVSDEFEGKRVIE 61 Query: 222 RHRMVNTALAPLMAEN-HAVSIKAL 293 RHR+VNT LA +A HA+ I A+ Sbjct: 62 RHRLVNTCLAKELATTVHALRIDAI 86
>BOLA1_PONPY (Q5RCE5) BolA-like protein 1| Length = 137 Score = 48.1 bits (113), Expect = 1e-05 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 7/90 (7%) Frame = +3 Query: 48 RGRQSSAAMGVTKEDVEAAVAAALSPTHLVVTDTSGGCGAS------YEIEVVSGKFEGK 209 +G S A+G + + + ALSP L + + SGG + + VVS +FEG Sbjct: 21 QGSAGSGAVGPVEAAIRTKLEQALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGL 80 Query: 210 RLLERHRMVNTALA-PLMAENHAVSIKALT 296 L+RHR+++ ALA L HA++I+A T Sbjct: 81 SPLQRHRLIHAALAEELAGPVHALAIQART 110
>BOLA1_HUMAN (Q9Y3E2) BolA-like protein 1| Length = 137 Score = 47.8 bits (112), Expect = 1e-05 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 7/90 (7%) Frame = +3 Query: 48 RGRQSSAAMGVTKEDVEAAVAAALSPTHLVVTDTSGGCGAS------YEIEVVSGKFEGK 209 +G S A+G + + + ALSP L + + SGG + + VVS +FEG Sbjct: 21 QGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGL 80 Query: 210 RLLERHRMVNTALA-PLMAENHAVSIKALT 296 L+RHR+V+ ALA L HA++I+A T Sbjct: 81 SPLQRHRLVHAALAEELGGPVHALAIQART 110
>YAE6_YEAST (P39724) Hypothetical protein YAL046C| Length = 118 Score = 45.8 bits (107), Expect = 5e-05 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Frame = +3 Query: 63 SAAMGVTKED--VEAAVAAALSPTHLVVTDTSGGCGASYEIEVVSGKFEGKRLLERHRMV 236 S M +T E+ + + L P V D SGGCG+ + I + S KF G L+++H++V Sbjct: 30 STQMAMTPEEKMITDKLQQELEPEVCKVQDVSGGCGSMFAINITSKKFNGLSLIKQHQLV 89 Query: 237 NTALAPLMAENHAVSI 284 N L ++ H + + Sbjct: 90 NRILRDDISRWHGLQL 105
>BOLA_SHIFL (P0ABE4) Protein bolA| Length = 105 Score = 43.1 bits (100), Expect = 3e-04 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%) Frame = +3 Query: 84 KEDVEAAVAAALSPTHLVVTDTS------GGCGASYEIEVVSGKFEGKRLLERHRMVNTA 245 +E +E + AA P L V D S G + +++ +VS +F G+R L RHRM+ + Sbjct: 4 RERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMIYST 63 Query: 246 LA-PLMAENHAVSIKALT 296 LA L HA+++ T Sbjct: 64 LAEELSTTVHALALHTYT 81
>BOLA_ECOLI (P0ABE2) Protein bolA| Length = 105 Score = 43.1 bits (100), Expect = 3e-04 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%) Frame = +3 Query: 84 KEDVEAAVAAALSPTHLVVTDTS------GGCGASYEIEVVSGKFEGKRLLERHRMVNTA 245 +E +E + AA P L V D S G + +++ +VS +F G+R L RHRM+ + Sbjct: 4 RERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMIYST 63 Query: 246 LA-PLMAENHAVSIKALT 296 LA L HA+++ T Sbjct: 64 LAEELSTTVHALALHTYT 81
>BOLA_ECOL6 (P0ABE3) Protein bolA| Length = 105 Score = 43.1 bits (100), Expect = 3e-04 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%) Frame = +3 Query: 84 KEDVEAAVAAALSPTHLVVTDTS------GGCGASYEIEVVSGKFEGKRLLERHRMVNTA 245 +E +E + AA P L V D S G + +++ +VS +F G+R L RHRM+ + Sbjct: 4 RERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMIYST 63 Query: 246 LA-PLMAENHAVSIKALT 296 LA L HA+++ T Sbjct: 64 LAEELSTTVHALALHTYT 81
>Y812_RICPR (Q9ZCE4) Hypothetical protein RP812| Length = 77 Score = 38.5 bits (88), Expect = 0.008 Identities = 19/76 (25%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = +3 Query: 72 MGVTKEDVEAAVAAALSPTHLVVTDTSGGCGASYEIEVVSGKFEGKRLLERHRMVNTALA 251 M ++ E++E + + + + +TD G Y +E+ +F G L+ +H++V AL+ Sbjct: 1 MAISAEELEKILKKSFPSSVIKITDLVGDQD-HYALEISDAQFNGLSLINQHKLVKNALS 59 Query: 252 PLMAEN-HAVSIKALT 296 ++ + H++SIK ++ Sbjct: 60 EILNKKLHSISIKTIS 75
>Y3122_SYNY3 (P73055) Hypothetical protein ssr3122| Length = 85 Score = 38.5 bits (88), Expect = 0.008 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Frame = +3 Query: 78 VTKEDVEAAVAAALSPTHLVVTDTSGGCGASYEIEVVSGKFEGKRLLERHRMVNTALAPL 257 ++ + V+ + AAL ++V D GG E VVS F G+ +++H+MV AL Sbjct: 2 ISLDQVKQQIQAALPDAEVMVNDLGGG--DHLEAVVVSSAFTGQSRVKQHQMVYGALKDA 59 Query: 258 MAEN--HAVSIKALT 296 +A HA+++K T Sbjct: 60 LASEAIHALALKTFT 74
>BOLA_VIBAL (Q56585) Protein bolA homolog| Length = 102 Score = 37.7 bits (86), Expect = 0.014 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 7/78 (8%) Frame = +3 Query: 84 KEDVEAAVAAALSPTHLVVTDTS------GGCGASYEIEVVSGKFEGKRLLERHRMVNTA 245 +E +E + + L P++L V + S G + +++ VVS F G+RL+ RHR V+ Sbjct: 3 QEIIEKKLHSELQPSYLKVINESYMHNVPPGSESHFKVIVVSDSFAGQRLIGRHRQVHQI 62 Query: 246 LAPLMAEN-HAVSIKALT 296 LA + + HA++I T Sbjct: 63 LADELDNHIHALAIHTYT 80
>BOLA_VIBCH (Q9KPS0) Protein bolA| Length = 106 Score = 36.2 bits (82), Expect = 0.042 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 7/75 (9%) Frame = +3 Query: 93 VEAAVAAALSPTHLVVTDTSG------GCGASYEIEVVSGKFEGKRLLERHRMVNTALAP 254 +E ++ P L V + S G + +++ VVS +F G R + RHR+VN LA Sbjct: 6 IEKKLSDEFQPEFLKVINESDMHNVPRGSESHFKVTVVSERFAGLRPVARHRLVNQTLAD 65 Query: 255 LMAEN-HAVSIKALT 296 +A + HA++I T Sbjct: 66 ELANHIHALAIHTYT 80
>YRPM_ACIGB (P33989) Hypothetical 9.2 kDa protein in rpoN-murA intergenic| region (ORF3) Length = 83 Score = 35.0 bits (79), Expect = 0.093 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Frame = +3 Query: 78 VTKEDVEAAVAAALSPTHLVVTDTSGGCGASYEIEVVSGKFEGKRLLERHRMVNTALAPL 257 + E + + AA + V+ +G +++ +V +FEGKR + R + V L Sbjct: 1 MNSEQLTEILKAAFPDAEVAVSGQAG----KFDLRIVDNQFEGKRPVPRQQAVYAPLNSY 56 Query: 258 MA--ENHAVSIKALT 296 +A E HAV+I+A+T Sbjct: 57 IASGEVHAVTIRAMT 71
>HAGA2_PORGI (Q51845) Hemagglutinin A precursor| Length = 2628 Score = 33.5 bits (75), Expect = 0.27 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -1 Query: 343 SAVTAGGDGWGWACSGVSALMETAWFSAMSGASAVLTIRWRSSSRFPSN 197 + + A GDG GW C L W +A G + V + W + P N Sbjct: 1616 TTIDADGDGQGWLCLSSGQL---GWLTAHGGTNVVASFSWNGMALNPDN 1661 Score = 33.5 bits (75), Expect = 0.27 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -1 Query: 343 SAVTAGGDGWGWACSGVSALMETAWFSAMSGASAVLTIRWRSSSRFPSN 197 + + A GDG GW C L W +A G + V + W + P N Sbjct: 1160 TTIDADGDGQGWLCLSSGQL---GWLTAHGGTNVVASFSWNGMALNPDN 1205 Score = 32.7 bits (73), Expect = 0.46 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -1 Query: 343 SAVTAGGDGWGWACSGVSALMETAWFSAMSGASAVLTIRWRSSSRFPSN 197 + + A GDG GW C L W +A G + V + W + P N Sbjct: 2072 TTIDADGDGQGWLCLSSGQL---DWLTAHGGTNVVASFSWNGMALNPDN 2117 Score = 32.7 bits (73), Expect = 0.46 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -1 Query: 343 SAVTAGGDGWGWACSGVSALMETAWFSAMSGASAVLTIRWRSSSRFPSN 197 + + A GDG GW C L W +A G + V + W + P N Sbjct: 704 TTIDADGDGQGWLCLSSGQL---DWLTAHGGTNVVASFSWNGMALNPDN 749
>HAGA1_PORGI (P59915) Hemagglutinin A precursor| Length = 2164 Score = 33.5 bits (75), Expect = 0.27 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -1 Query: 343 SAVTAGGDGWGWACSGVSALMETAWFSAMSGASAVLTIRWRSSSRFPSN 197 + + A GDG GW C L W +A G + V + W + P N Sbjct: 1608 TTIDADGDGQGWLCLSSGQL---GWLTAHGGTNVVASFSWNGMALNPDN 1653 Score = 33.5 bits (75), Expect = 0.27 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -1 Query: 343 SAVTAGGDGWGWACSGVSALMETAWFSAMSGASAVLTIRWRSSSRFPSN 197 + + A GDG GW C L W +A G + V + W + P N Sbjct: 704 TTIDADGDGQGWLCLSSGQL---GWLTAHGGTNVVASFSWNGMALNPDN 749 Score = 32.7 bits (73), Expect = 0.46 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -1 Query: 343 SAVTAGGDGWGWACSGVSALMETAWFSAMSGASAVLTIRWRSSSRFPSN 197 + + A GDG GW C L W +A G + V + W + P N Sbjct: 1156 TTIDADGDGQGWLCLSSGQL---DWLTAHGGTNVVASFSWNGMALNPDN 1201
>PRTH_PORGI (P46071) Protease prtH (EC 3.4.22.-)| Length = 989 Score = 32.3 bits (72), Expect = 0.61 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -1 Query: 343 SAVTAGGDGWGWACSGVSALMETAWFSAMSGASAVLTIRWRSSSRFPSN 197 + + A GDG GW C L W +A G + V + W + P N Sbjct: 109 TTIDADGDGQGWLCLSSGQL---DWLTAHGGTNVVSSFSWNGMALNPDN 154
>YRBA_SHIFL (P0A9W8) Protein yrbA| Length = 84 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = +3 Query: 90 DVEAAVAAALSPTHLVVTDTSGGCGASYEIEVVSGKFEGKRLLERHRMVNTALAPLMAEN 269 ++++ + ALS + V+ G G+ +++ V F+G +++ + V L +A+N Sbjct: 5 EIQSVLMNALSLQEVHVS----GDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADN 60 Query: 270 --HAVSIKALT 296 HAVSIKA T Sbjct: 61 RIHAVSIKAYT 71
>YRBA_ECOLI (P0A9W6) Protein yrbA| Length = 84 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = +3 Query: 90 DVEAAVAAALSPTHLVVTDTSGGCGASYEIEVVSGKFEGKRLLERHRMVNTALAPLMAEN 269 ++++ + ALS + V+ G G+ +++ V F+G +++ + V L +A+N Sbjct: 5 EIQSVLMNALSLQEVHVS----GDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADN 60 Query: 270 --HAVSIKALT 296 HAVSIKA T Sbjct: 61 RIHAVSIKAYT 71
>YRBA_ECOL6 (P0A9W7) Protein yrbA| Length = 84 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = +3 Query: 90 DVEAAVAAALSPTHLVVTDTSGGCGASYEIEVVSGKFEGKRLLERHRMVNTALAPLMAEN 269 ++++ + ALS + V+ G G+ +++ V F+G +++ + V L +A+N Sbjct: 5 EIQSVLMNALSLQEVHVS----GDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADN 60 Query: 270 --HAVSIKALT 296 HAVSIKA T Sbjct: 61 RIHAVSIKAYT 71
>Y372_BUCAP (Q8K9G5) Hypothetical protein BUsg372| Length = 80 Score = 30.0 bits (66), Expect = 3.0 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Frame = +3 Query: 171 YEIEVVSGKFEGKRLLERHRMVNTALAPLMAEN--HAVSIKA 290 YEI + F+G ++R + + L L+ EN HA+SIK+ Sbjct: 28 YEITAIGNVFKGLTQVKRQKKIYNPLIDLITENKIHAISIKS 69
>NEST_HUMAN (P48681) Nestin| Length = 1618 Score = 29.3 bits (64), Expect = 5.1 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +3 Query: 51 GRQSSAAMGVTKEDVEAAVAAALSPTHLVVTDTSGGCGASYEIEVVSGKFEGK 209 G++ A+ G + ED A++A LSP H + G G S + G+ EG+ Sbjct: 448 GQRQEASTGQSPED-HASLAPPLSPDHSSLEAKDGESGGSRVFSICRGEGEGQ 499
>ADH1_GADCA (P26325) Alcohol dehydrogenase 1 (EC 1.1.1.1)| Length = 375 Score = 28.9 bits (63), Expect = 6.7 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = -1 Query: 382 HPTNASLGASQALSAVTAGGDGWGWACSGVSALMETAWFSAMSGASAVLTIRW 224 +P + S SQ LS +T GG + C G +M A S + G + + W Sbjct: 243 NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW 295
>SSAU_SALTY (P96069) Secretion system apparatus protein ssaU| Length = 352 Score = 28.9 bits (63), Expect = 6.7 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +3 Query: 36 ETKRRGRQSSAAMGVTKEDVEAAVAAALSPTHLVV 140 +T+RR QS G + V+ +VA +PTH+ V Sbjct: 234 KTRRREMQSEIQSGSLAQSVKQSVAVVRNPTHIAV 268
>GIDB_BIFLO (Q8G6J4) Methyltransferase gidB (EC 2.1.-.-) (Glucose-inhibited| division protein B) Length = 221 Score = 28.9 bits (63), Expect = 6.7 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +3 Query: 6 LLLRRPGTDRETKRRGRQSSAAMGVTKEDVEAAVAAALSPTHLVVTD 146 + L+ E + G++ + G VEAAV L PTH+V+ D Sbjct: 173 IALKGRSAQAEIDKAGKEIAKFGGRRPRVVEAAVGPDLEPTHVVIVD 219
>ZN517_HUMAN (Q6ZMY9) Zinc finger protein 517| Length = 492 Score = 28.9 bits (63), Expect = 6.7 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = +3 Query: 24 GTDRETKRRGRQSSAAMGVTKEDVEAAVAAALSPTHLVVTDTSGGCGASYEIEVVSGKFE 203 G+D+ T R R+ SA+ V +ED+ V ++ +P + V CG + F Sbjct: 144 GSDKPTHPRAREHSASPRVLQEDLGRPVGSS-APRYRCV------CGKA---------FR 187 Query: 204 GKRLLERHRMVNTALAP 254 LL RH++V+T P Sbjct: 188 YNSLLLRHQIVHTGAKP 204
>PRTP_MCMVS (P30674) Probable processing and transport protein (Infected cell| protein 18.5) Length = 798 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +2 Query: 185 GVGQVRGEAAAGAPPDGQHRAGAAHGR 265 G + R EAA+GA G+ AGAA GR Sbjct: 418 GAARSRAEAASGAGAGGEEGAGAAAGR 444 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,884,830 Number of Sequences: 219361 Number of extensions: 673716 Number of successful extensions: 2944 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2865 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2932 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
