| Clone Name | bast73e02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C10, full insert sequence Length = 1811 Score = 652 bits (329), Expect = 0.0 Identities = 431/465 (92%) Strand = Plus / Plus Query: 1 acgtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcg 60 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 298 acgtcatcgacgagatcgagaacctgtgccgcgaccgcgccctcgccgcgttccgcctcg 357 Query: 61 acgccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccg 120 ||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 358 acgccgcgtcgtggggcgtcaacgtgcagccctactccggctcgccggccaacttcgccg 417 Query: 121 cctacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcg 180 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 418 cctacacggcgctcctcaacccgcacgaccgcatcatggggctcgacctcccctccggtg 477 Query: 181 gacacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatct 240 | ||||||||||| |||||||||||||| || ||||||||||||||||| || || |||| Sbjct: 478 gccacctcacccatggctactacaccgcgggcgggaagaagatctccgcgacgtcgatct 537 Query: 241 acttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagc 300 ||||||||||||| ||||||||||| |||||||||| || |||||||||||||| |||| Sbjct: 538 acttcgagagcctcccctacaaggtgagcgccgccacggggtacatcgactacgagaagc 597 Query: 301 tcgaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacc 360 | ||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 598 tggaggagaaggcgctcgacttccgccccaagctcatcatctgcggcggcagcgcgtacc 657 Query: 361 ccagggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcc 420 | |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| Sbjct: 658 cgagggactgggactacgccaagctcagggccgtcgccgacaaggtcggggcgctgctcc 717 Query: 421 tctgcgacatggcgcacatcagcgggctggtcgccgcgcaggaag 465 ||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 718 tctgcgacatggcgcacatcagcggcctcgtcgccgcgcaggaag 762
>dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N02, full insert sequence Length = 1896 Score = 652 bits (329), Expect = 0.0 Identities = 431/465 (92%) Strand = Plus / Plus Query: 1 acgtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcg 60 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 299 acgtcatcgacgagatcgagaacctgtgccgcgaccgcgccctcgccgcgttccgcctcg 358 Query: 61 acgccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccg 120 ||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 359 acgccgcgtcgtggggcgtcaacgtgcagccctactccggctcgccggccaacttcgccg 418 Query: 121 cctacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcg 180 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 419 cctacacggcgctcctcaacccgcacgaccgcatcatggggctcgacctcccctccggtg 478 Query: 181 gacacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatct 240 | ||||||||||| |||||||||||||| || ||||||||||||||||| || || |||| Sbjct: 479 gccacctcacccatggctactacaccgcgggcgggaagaagatctccgcgacgtcgatct 538 Query: 241 acttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagc 300 ||||||||||||| ||||||||||| |||||||||| || |||||||||||||| |||| Sbjct: 539 acttcgagagcctcccctacaaggtgagcgccgccacggggtacatcgactacgagaagc 598 Query: 301 tcgaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacc 360 | ||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 599 tggaggagaaggcgctcgacttccgccccaagctcatcatctgcggcggcagcgcgtacc 658 Query: 361 ccagggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcc 420 | |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| Sbjct: 659 cgagggactgggactacgccaagctcagggccgtcgccgacaaggtcggggcgctgctcc 718 Query: 421 tctgcgacatggcgcacatcagcgggctggtcgccgcgcaggaag 465 ||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 719 tctgcgacatggcgcacatcagcggcctcgtcgccgcgcaggaag 763
>dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100I04, full insert sequence Length = 1811 Score = 652 bits (329), Expect = 0.0 Identities = 431/465 (92%) Strand = Plus / Plus Query: 1 acgtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcg 60 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 299 acgtcatcgacgagatcgagaacctgtgccgcgaccgcgccctcgccgcgttccgcctcg 358 Query: 61 acgccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccg 120 ||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 359 acgccgcgtcgtggggcgtcaacgtgcagccctactccggctcgccggccaacttcgccg 418 Query: 121 cctacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcg 180 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 419 cctacacggcgctcctcaacccgcacgaccgcatcatggggctcgacctcccctccggtg 478 Query: 181 gacacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatct 240 | ||||||||||| |||||||||||||| || ||||||||||||||||| || || |||| Sbjct: 479 gccacctcacccatggctactacaccgcgggcgggaagaagatctccgcgacgtcgatct 538 Query: 241 acttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagc 300 ||||||||||||| ||||||||||| |||||||||| || |||||||||||||| |||| Sbjct: 539 acttcgagagcctcccctacaaggtgagcgccgccacggggtacatcgactacgagaagc 598 Query: 301 tcgaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacc 360 | ||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 599 tggaggagaaggcgctcgacttccgccccaagctcatcatctgcggcggcagcgcgtacc 658 Query: 361 ccagggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcc 420 | |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| Sbjct: 659 cgagggactgggactacgccaagctcagggccgtcgccgacaaggtcggggcgctgctcc 718 Query: 421 tctgcgacatggcgcacatcagcgggctggtcgccgcgcaggaag 465 ||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 719 tctgcgacatggcgcacatcagcggcctcgtcgccgcgcaggaag 763
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 638 bits (322), Expect = e-180 Identities = 427/462 (92%) Strand = Plus / Plus Query: 1 acgtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcg 60 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 14861074 acgtcatcgacgagatcgagaacctgtgccgcgaccgcgccctcgccgcgttccgcctcg 14861133 Query: 61 acgccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccg 120 ||||||| || ||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 14861134 acgccgcgtcgtggggcgtcaacgtgcagccctactccggctcgccggccaccttcgccg 14861193 Query: 121 cctacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcg 180 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 14861194 cctacacggcgctcctcaacccgcacgaccgcatcatggggctcgacctcccctccggtg 14861253 Query: 181 gacacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatct 240 | ||||||||||| |||||||||||||| || ||||||||||||||||| || || |||| Sbjct: 14861254 gccacctcacccatggctactacaccgcgggcgggaagaagatctccgcgacgtcgatct 14861313 Query: 241 acttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagc 300 ||||||||||||| ||||||||||| |||||||||| || |||||||||||||| |||| Sbjct: 14861314 acttcgagagcctcccctacaaggtgagcgccgccacggggtacatcgactacgagaagc 14861373 Query: 301 tcgaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacc 360 | ||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 14861374 tggaggagaaggcgctcgacttccgccccaagctcatcatctgcggcggcagcgcgtacc 14861433 Query: 361 ccagggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcc 420 | |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| Sbjct: 14861434 cgagggactgggactacgccaagctcagggccgtcgccgacaaggtcggggcgctgctcc 14861493 Query: 421 tctgcgacatggcgcacatcagcgggctggtcgccgcgcagg 462 ||||||||||||||||||||||||| || ||||||||||||| Sbjct: 14861494 tctgcgacatggcgcacatcagcggcctcgtcgccgcgcagg 14861535 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 23 cctctgccgcgaccgcgccctcgccgcc 50 |||| |||||| |||||||||||||||| Sbjct: 2680317 cctccgccgcggccgcgccctcgccgcc 2680290
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 630 bits (318), Expect = e-178 Identities = 427/462 (92%), Gaps = 1/462 (0%) Strand = Plus / Plus Query: 1 acgtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcg 60 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 84141 acgtcatcgacgagatcgagaacctgtgccgcgaccgcgccctcgccgcgttccgcctcg 84200 Query: 61 acgccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccg 120 ||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 84201 acgccgcgtcgtggggcgtcaacgtgcagccctactccggctcgccggccaacttcgccg 84260 Query: 121 cctacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcg 180 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 84261 cctacacggcgctcctcaacccgcacgaccgcatcatggggctcgacctcccctccggtg 84320 Query: 181 gacacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatct 240 | ||||||||||| |||||||||||||| || ||||||||||||||||| || || |||| Sbjct: 84321 gccacctcacccatggctactacaccgcgggcgggaagaagatctccgcgacgtcgatct 84380 Query: 241 acttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagc 300 ||||||||||||| ||||||||||| |||||||||| || |||||||||||||| |||| Sbjct: 84381 acttcgagagcctcccctacaaggtgagcgccgccacggggtacatcgactacgagaagc 84440 Query: 301 tcgaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacc 360 | ||||||||||| | ||||||||||||||||||||||||||||| |||||||| || | Sbjct: 84441 tggaggagaaggcgctcgacttccgccccaagctcatcatctgcggcggcagcgcgta-c 84499 Query: 361 ccagggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcc 420 | |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| Sbjct: 84500 cgagggactgggactacgccaagctcagggccgtcgccgacaaggtcggggcgctgctcc 84559 Query: 421 tctgcgacatggcgcacatcagcgggctggtcgccgcgcagg 462 ||||||||||||||||||||||||| || ||||||||||||| Sbjct: 84560 tctgcgacatggcgcacatcagcggcctcgtcgccgcgcagg 84601
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 630 bits (318), Expect = e-178 Identities = 427/462 (92%), Gaps = 1/462 (0%) Strand = Plus / Plus Query: 1 acgtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcg 60 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 14941042 acgtcatcgacgagatcgagaacctgtgccgcgaccgcgccctcgccgcgttccgcctcg 14941101 Query: 61 acgccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccg 120 ||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 14941102 acgccgcgtcgtggggcgtcaacgtgcagccctactccggctcgccggccaacttcgccg 14941161 Query: 121 cctacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcg 180 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 14941162 cctacacggcgctcctcaacccgcacgaccgcatcatggggctcgacctcccctccggtg 14941221 Query: 181 gacacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatct 240 | ||||||||||| |||||||||||||| || ||||||||||||||||| || || |||| Sbjct: 14941222 gccacctcacccatggctactacaccgcgggcgggaagaagatctccgcgacgtcgatct 14941281 Query: 241 acttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagc 300 ||||||||||||| ||||||||||| |||||||||| || |||||||||||||| |||| Sbjct: 14941282 acttcgagagcctcccctacaaggtgagcgccgccacggggtacatcgactacgagaagc 14941341 Query: 301 tcgaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacc 360 | ||||||||||| | ||||||||||||||||||||||||||||| |||||||| || | Sbjct: 14941342 tggaggagaaggcgctcgacttccgccccaagctcatcatctgcggcggcagcgcgta-c 14941400 Query: 361 ccagggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcc 420 | |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| Sbjct: 14941401 cgagggactgggactacgccaagctcagggccgtcgccgacaaggtcggggcgctgctcc 14941460 Query: 421 tctgcgacatggcgcacatcagcgggctggtcgccgcgcagg 462 ||||||||||||||||||||||||| || ||||||||||||| Sbjct: 14941461 tctgcgacatggcgcacatcagcggcctcgtcgccgcgcagg 14941502 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 23 cctctgccgcgaccgcgccctcgccgcc 50 |||| |||||| |||||||||||||||| Sbjct: 2689348 cctccgccgcggccgcgccctcgccgcc 2689321
>gb|AY105338.1| Zea mays PCO102700 mRNA sequence Length = 1951 Score = 613 bits (309), Expect = e-172 Identities = 426/465 (91%) Strand = Plus / Plus Query: 1 acgtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcg 60 ||||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||| | Sbjct: 426 acgtcatcgacgagatcgagaacctctgccggtcacgcgcgctcgctgccttccaccttg 485 Query: 61 acgccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccg 120 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 486 acgccgcgtcctggggcgtcaacgtgcagccctactcgggctcccccgccaacttcgccg 545 Query: 121 cctacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcg 180 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 546 cctacaccgcgctgctcaacccgcacgaccggatcatggggctcgaccttccctccggcg 605 Query: 181 gacacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatct 240 |||||||||| ||||| |||||||| ||||| || |||||||||||||||||||| |||| Sbjct: 606 gacacctcactcacgggtactacacggccggcggtaagaagatctccgccacctcgatct 665 Query: 241 acttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagc 300 |||| ||||||||||| |||||||| |||||||| | || |||||||||||||| |||| Sbjct: 666 actttgagagcctgccgtacaaggtgagcgccgcaacggggtacatcgactacgagaagc 725 Query: 301 tcgaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacc 360 ||||||||||||| | ||||||||||||||||||||||||||||||||||| || |||| Sbjct: 726 tcgaggagaaggcacttgacttccgccccaagctcatcatctgcggtggcagtgcgtacc 785 Query: 361 ccagggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcc 420 | ||||||||||| |||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 786 cgagggactgggattacgccaagctcagggccgtcgccgacaaggtcggggccctgctgc 845 Query: 421 tctgcgacatggcgcacatcagcgggctggtcgccgcgcaggaag 465 |||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 846 tctgcgacatggcgcacatcagcgggctcgtcgccgcgcaggaag 890
>dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L02, full insert sequence Length = 1944 Score = 391 bits (197), Expect = e-105 Identities = 395/461 (85%) Strand = Plus / Plus Query: 3 gtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgac 62 |||||||||||| | ||| | |||||||||| |||||| ||||||||||||| ||||||| Sbjct: 498 gtcatcgacgaggtggaggagctctgccgcgcccgcgcgctcgccgccttccacctcgac 557 Query: 63 gccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcc 122 ||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 558 cccgaggcctggggcgtcaacgtgcagccctactccggctcgccggcgaacttcgccgcc 617 Query: 123 tacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcgga 182 ||||||| ||| ||| | || ||||| ||||||||||||||||| | || |||||||| Sbjct: 618 tacaccgggctgctccaaccccacgagcggatcatggggctcgatttgccgtccggcggc 677 Query: 183 cacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatctac 242 |||||||| |||||||||||||||||||| || || |||||||||||||| ||||||||| Sbjct: 678 cacctcacgcacggctactacaccgccggcggcaaaaagatctccgccacgtccatctac 737 Query: 243 ttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagctc 302 |||||||||||||| |||||||| ||| ||| | || ||| |||| || || ||||| Sbjct: 738 ttcgagagcctgccgtacaaggtgagctccgagacaggatacgtcgattatgataagctg 797 Query: 303 gaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacccc 362 ||||||||||||||||| || || |||||||||||||||||||| || ||||| ||||| Sbjct: 798 gaggagaaggccatggattttcggcccaagctcatcatctgcggcgggagcgcgtacccg 857 Query: 363 agggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcctc 422 |||| ||||| ||||||| | ||||||||||||| || ||| ||| |||||| | ||| Sbjct: 858 cgggattgggattacgccaggttcagggccatcgcggataagtgcggcgccatgttgctc 917 Query: 423 tgcgacatggcgcacatcagcgggctggtcgccgcgcagga 463 ||||||||||| |||||||| || || || ||||||||||| Sbjct: 918 tgcgacatggctcacatcagtggcctagttgccgcgcagga 958
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 389 bits (196), Expect = e-105 Identities = 394/460 (85%) Strand = Plus / Minus Query: 3 gtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgac 62 |||||||||||| | ||| | |||||||||| |||||| ||||||||||||| ||||||| Sbjct: 12440454 gtcatcgacgaggtggaggagctctgccgcgcccgcgcgctcgccgccttccacctcgac 12440395 Query: 63 gccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcc 122 ||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 12440394 cccgaggcctggggcgtcaacgtgcagccctactccggctcgccggcgaacttcgccgcc 12440335 Query: 123 tacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcgga 182 ||||||| ||| ||| | || ||||| ||||||||||||||||| | || |||||||| Sbjct: 12440334 tacaccgggctgctccaaccccacgagcggatcatggggctcgatttgccgtccggcggc 12440275 Query: 183 cacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatctac 242 |||||||| |||||||||||||||||||| || || |||||||||||||| ||||||||| Sbjct: 12440274 cacctcacgcacggctactacaccgccggcggcaaaaagatctccgccacgtccatctac 12440215 Query: 243 ttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagctc 302 |||||||||||||| |||||||| ||| ||| | || ||| |||| || || ||||| Sbjct: 12440214 ttcgagagcctgccgtacaaggtgagctccgagacaggatacgtcgattatgataagctg 12440155 Query: 303 gaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacccc 362 ||||||||||||||||| || || |||||||||||||||||||| || ||||| ||||| Sbjct: 12440154 gaggagaaggccatggattttcggcccaagctcatcatctgcggcgggagcgcgtacccg 12440095 Query: 363 agggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcctc 422 |||| ||||| ||||||| | ||||||||||||| || ||| ||| |||||| | ||| Sbjct: 12440094 cgggattgggattacgccaggttcagggccatcgcggataagtgcggcgccatgttgctc 12440035 Query: 423 tgcgacatggcgcacatcagcgggctggtcgccgcgcagg 462 ||||||||||| |||||||| || || || |||||||||| Sbjct: 12440034 tgcgacatggctcacatcagtggcctagttgccgcgcagg 12439995
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 389 bits (196), Expect = e-105 Identities = 394/460 (85%) Strand = Plus / Minus Query: 3 gtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgac 62 |||||||||||| | ||| | |||||||||| |||||| ||||||||||||| ||||||| Sbjct: 12394824 gtcatcgacgaggtggaggagctctgccgcgcccgcgcgctcgccgccttccacctcgac 12394765 Query: 63 gccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcc 122 ||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 12394764 cccgaggcctggggcgtcaacgtgcagccctactccggctcgccggcgaacttcgccgcc 12394705 Query: 123 tacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcgga 182 ||||||| ||| ||| | || ||||| ||||||||||||||||| | || |||||||| Sbjct: 12394704 tacaccgggctgctccaaccccacgagcggatcatggggctcgatttgccgtccggcggc 12394645 Query: 183 cacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatctac 242 |||||||| |||||||||||||||||||| || || |||||||||||||| ||||||||| Sbjct: 12394644 cacctcacgcacggctactacaccgccggcggcaaaaagatctccgccacgtccatctac 12394585 Query: 243 ttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagctc 302 |||||||||||||| |||||||| ||| ||| | || ||| |||| || || ||||| Sbjct: 12394584 ttcgagagcctgccgtacaaggtgagctccgagacaggatacgtcgattatgataagctg 12394525 Query: 303 gaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacccc 362 ||||||||||||||||| || || |||||||||||||||||||| || ||||| ||||| Sbjct: 12394524 gaggagaaggccatggattttcggcccaagctcatcatctgcggcgggagcgcgtacccg 12394465 Query: 363 agggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcctc 422 |||| ||||| ||||||| | ||||||||||||| || ||| ||| |||||| | ||| Sbjct: 12394464 cgggattgggattacgccaggttcagggccatcgcggataagtgcggcgccatgttgctc 12394405 Query: 423 tgcgacatggcgcacatcagcgggctggtcgccgcgcagg 462 ||||||||||| |||||||| || || || |||||||||| Sbjct: 12394404 tgcgacatggctcacatcagtggcctagttgccgcgcagg 12394365
>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163702 Score = 389 bits (196), Expect = e-105 Identities = 394/460 (85%) Strand = Plus / Minus Query: 3 gtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgac 62 |||||||||||| | ||| | |||||||||| |||||| ||||||||||||| ||||||| Sbjct: 154819 gtcatcgacgaggtggaggagctctgccgcgcccgcgcgctcgccgccttccacctcgac 154760 Query: 63 gccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcc 122 ||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 154759 cccgaggcctggggcgtcaacgtgcagccctactccggctcgccggcgaacttcgccgcc 154700 Query: 123 tacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcgga 182 ||||||| ||| ||| | || ||||| ||||||||||||||||| | || |||||||| Sbjct: 154699 tacaccgggctgctccaaccccacgagcggatcatggggctcgatttgccgtccggcggc 154640 Query: 183 cacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatctac 242 |||||||| |||||||||||||||||||| || || |||||||||||||| ||||||||| Sbjct: 154639 cacctcacgcacggctactacaccgccggcggcaaaaagatctccgccacgtccatctac 154580 Query: 243 ttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagctc 302 |||||||||||||| |||||||| ||| ||| | || ||| |||| || || ||||| Sbjct: 154579 ttcgagagcctgccgtacaaggtgagctccgagacaggatacgtcgattatgataagctg 154520 Query: 303 gaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacccc 362 ||||||||||||||||| || || |||||||||||||||||||| || ||||| ||||| Sbjct: 154519 gaggagaaggccatggattttcggcccaagctcatcatctgcggcgggagcgcgtacccg 154460 Query: 363 agggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcctc 422 |||| ||||| ||||||| | ||||||||||||| || ||| ||| |||||| | ||| Sbjct: 154459 cgggattgggattacgccaggttcagggccatcgcggataagtgcggcgccatgttgctc 154400 Query: 423 tgcgacatggcgcacatcagcgggctggtcgccgcgcagg 462 ||||||||||| |||||||| || || || |||||||||| Sbjct: 154399 tgcgacatggctcacatcagtggcctagttgccgcgcagg 154360
>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132241 Score = 389 bits (196), Expect = e-105 Identities = 394/460 (85%) Strand = Plus / Minus Query: 3 gtcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgac 62 |||||||||||| | ||| | |||||||||| |||||| ||||||||||||| ||||||| Sbjct: 41932 gtcatcgacgaggtggaggagctctgccgcgcccgcgcgctcgccgccttccacctcgac 41873 Query: 63 gccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcc 122 ||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 41872 cccgaggcctggggcgtcaacgtgcagccctactccggctcgccggcgaacttcgccgcc 41813 Query: 123 tacaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcgga 182 ||||||| ||| ||| | || ||||| ||||||||||||||||| | || |||||||| Sbjct: 41812 tacaccgggctgctccaaccccacgagcggatcatggggctcgatttgccgtccggcggc 41753 Query: 183 cacctcacccacggctactacaccgccggggggaagaagatctccgccacctccatctac 242 |||||||| |||||||||||||||||||| || || |||||||||||||| ||||||||| Sbjct: 41752 cacctcacgcacggctactacaccgccggcggcaaaaagatctccgccacgtccatctac 41693 Query: 243 ttcgagagcctgccctacaaggtcagcgccgccaacggctacatcgactacgacaagctc 302 |||||||||||||| |||||||| ||| ||| | || ||| |||| || || ||||| Sbjct: 41692 ttcgagagcctgccgtacaaggtgagctccgagacaggatacgtcgattatgataagctg 41633 Query: 303 gaggagaaggccatggacttccgccccaagctcatcatctgcggtggcagcgcctacccc 362 ||||||||||||||||| || || |||||||||||||||||||| || ||||| ||||| Sbjct: 41632 gaggagaaggccatggattttcggcccaagctcatcatctgcggcgggagcgcgtacccg 41573 Query: 363 agggactgggactacgccaagctcagggccatcgccgacaagatcggggccatgctcctc 422 |||| ||||| ||||||| | ||||||||||||| || ||| ||| |||||| | ||| Sbjct: 41572 cgggattgggattacgccaggttcagggccatcgcggataagtgcggcgccatgttgctc 41513 Query: 423 tgcgacatggcgcacatcagcgggctggtcgccgcgcagg 462 ||||||||||| |||||||| || || || |||||||||| Sbjct: 41512 tgcgacatggctcacatcagtggcctagttgccgcgcagg 41473
>dbj|AK105983.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G03, full insert sequence Length = 1153 Score = 182 bits (92), Expect = 7e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 338 catctgcggtggcagcgcctaccccagggactgggactacgccaagctcagggccatcgc 397 ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||| Sbjct: 1 catctgcggcggcagcgcgtacccgagggactgggactacgccaagctcagggccgtcgc 60 Query: 398 cgacaagatcggggccatgctcctctgcgacatggcgcacatcagcgggctggtcgccgc 457 ||||||| ||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 61 cgacaaggtcggggcgctgctcctctgcgacatggcgcacatcagcggcctcgtcgccgc 120 Query: 458 gcaggaag 465 |||||||| Sbjct: 121 gcaggaag 128
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21, complete sequence Length = 137650 Score = 167 bits (84), Expect = 4e-38 Identities = 283/344 (82%), Gaps = 4/344 (1%) Strand = Plus / Minus Query: 5 catcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacgc 64 |||||||| |||||| ||||||| |||||||||| |||||||||||| |||||||| | Sbjct: 36498 catcgacgccatcgagcgcctctgctgcgaccgcgcgctcgccgccttcggcctcgac-c 36440 Query: 65 cgcctc-ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcct 123 || | | |||||||||||||||||||||||||||| || | ||||||||||||||| || Sbjct: 36439 cgtcgcgctggggcgtcaacgtgcagccctactcctgcacctccgccaacttcgccgtct 36380 Query: 124 acaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggac 183 |||| | ||||||| ||| ||||| |||||||||| |||||| || |||||||| | Sbjct: 36379 acacggggctcctcctccccaacgacaggatcatgggcctcgactcgccgtccggcggcc 36320 Query: 184 acctcacccacggctactacaccgccggggggaagaagatctccgccacctccatctact 243 || ||| |||||| |||||||| || | || |||||| |||||| | ||||||||| || Sbjct: 36319 acgtcagccacgggtactacacgcccagcggcaagaaggtctccggcgcctccatcttct 36260 Query: 244 tcgagagcctgccctacaaggtcagcgccgc-caacggctacatcgactacgacaagctc 302 |||||| ||| |||||| ||| | | |||| || ||| |||||||| ||||| ||| | Sbjct: 36259 tcgagaacctctcctacagggtgaac-ccgcacaccgggtacatcgattacgataaggta 36201 Query: 303 gaggagaaggccatggacttccgccccaagctcatcatctgcgg 346 |||||||||||| |||| |||| ||||||| | |||||||||| Sbjct: 36200 gaggagaaggccgtggatttccaccccaagattctcatctgcgg 36157
>ref|XM_475264.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1764 Score = 167 bits (84), Expect = 4e-38 Identities = 283/344 (82%), Gaps = 4/344 (1%) Strand = Plus / Plus Query: 5 catcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacgc 64 |||||||| |||||| ||||||| |||||||||| |||||||||||| |||||||| | Sbjct: 576 catcgacgccatcgagcgcctctgctgcgaccgcgcgctcgccgccttcggcctcgac-c 634 Query: 65 cgcctc-ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcct 123 || | | |||||||||||||||||||||||||||| || | ||||||||||||||| || Sbjct: 635 cgtcgcgctggggcgtcaacgtgcagccctactcctgcacctccgccaacttcgccgtct 694 Query: 124 acaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggac 183 |||| | ||||||| ||| ||||| |||||||||| |||||| || |||||||| | Sbjct: 695 acacggggctcctcctccccaacgacaggatcatgggcctcgactcgccgtccggcggcc 754 Query: 184 acctcacccacggctactacaccgccggggggaagaagatctccgccacctccatctact 243 || ||| |||||| |||||||| || | || |||||| |||||| | ||||||||| || Sbjct: 755 acgtcagccacgggtactacacgcccagcggcaagaaggtctccggcgcctccatcttct 814 Query: 244 tcgagagcctgccctacaaggtcagcgccgc-caacggctacatcgactacgacaagctc 302 |||||| ||| |||||| ||| | | |||| || ||| |||||||| ||||| ||| | Sbjct: 815 tcgagaacctctcctacagggtgaac-ccgcacaccgggtacatcgattacgataaggta 873 Query: 303 gaggagaaggccatggacttccgccccaagctcatcatctgcgg 346 |||||||||||| |||| |||| ||||||| | |||||||||| Sbjct: 874 gaggagaaggccgtggatttccaccccaagattctcatctgcgg 917
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 167 bits (84), Expect = 4e-38 Identities = 283/344 (82%), Gaps = 4/344 (1%) Strand = Plus / Minus Query: 5 catcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacgc 64 |||||||| |||||| ||||||| |||||||||| |||||||||||| |||||||| | Sbjct: 165521 catcgacgccatcgagcgcctctgctgcgaccgcgcgctcgccgccttcggcctcgac-c 165463 Query: 65 cgcctc-ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcct 123 || | | |||||||||||||||||||||||||||| || | ||||||||||||||| || Sbjct: 165462 cgtcgcgctggggcgtcaacgtgcagccctactcctgcacctccgccaacttcgccgtct 165403 Query: 124 acaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggac 183 |||| | ||||||| ||| ||||| |||||||||| |||||| || |||||||| | Sbjct: 165402 acacggggctcctcctccccaacgacaggatcatgggcctcgactcgccgtccggcggcc 165343 Query: 184 acctcacccacggctactacaccgccggggggaagaagatctccgccacctccatctact 243 || ||| |||||| |||||||| || | || |||||| |||||| | ||||||||| || Sbjct: 165342 acgtcagccacgggtactacacgcccagcggcaagaaggtctccggcgcctccatcttct 165283 Query: 244 tcgagagcctgccctacaaggtcagcgccgc-caacggctacatcgactacgacaagctc 302 |||||| ||| |||||| ||| | | |||| || ||| |||||||| ||||| ||| | Sbjct: 165282 tcgagaacctctcctacagggtgaac-ccgcacaccgggtacatcgattacgataaggta 165224 Query: 303 gaggagaaggccatggacttccgccccaagctcatcatctgcgg 346 |||||||||||| |||| |||| ||||||| | |||||||||| Sbjct: 165223 gaggagaaggccgtggatttccaccccaagattctcatctgcgg 165180
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 167 bits (84), Expect = 4e-38 Identities = 283/344 (82%), Gaps = 4/344 (1%) Strand = Plus / Minus Query: 5 catcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacgc 64 |||||||| |||||| ||||||| |||||||||| |||||||||||| |||||||| | Sbjct: 20909720 catcgacgccatcgagcgcctctgctgcgaccgcgcgctcgccgccttcggcctcgac-c 20909662 Query: 65 cgcctc-ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcct 123 || | | |||||||||||||||||||||||||||| || | ||||||||||||||| || Sbjct: 20909661 cgtcgcgctggggcgtcaacgtgcagccctactcctgcacctccgccaacttcgccgtct 20909602 Query: 124 acaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggac 183 |||| | ||||||| ||| ||||| |||||||||| |||||| || |||||||| | Sbjct: 20909601 acacggggctcctcctccccaacgacaggatcatgggcctcgactcgccgtccggcggcc 20909542 Query: 184 acctcacccacggctactacaccgccggggggaagaagatctccgccacctccatctact 243 || ||| |||||| |||||||| || | || |||||| |||||| | ||||||||| || Sbjct: 20909541 acgtcagccacgggtactacacgcccagcggcaagaaggtctccggcgcctccatcttct 20909482 Query: 244 tcgagagcctgccctacaaggtcagcgccgc-caacggctacatcgactacgacaagctc 302 |||||| ||| |||||| ||| | | |||| || ||| |||||||| ||||| ||| | Sbjct: 20909481 tcgagaacctctcctacagggtgaac-ccgcacaccgggtacatcgattacgataaggta 20909423 Query: 303 gaggagaaggccatggacttccgccccaagctcatcatctgcgg 346 |||||||||||| |||| |||| ||||||| | |||||||||| Sbjct: 20909422 gaggagaaggccgtggatttccaccccaagattctcatctgcgg 20909379
>dbj|AK109617.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-H03, full insert sequence Length = 2192 Score = 167 bits (84), Expect = 4e-38 Identities = 283/344 (82%), Gaps = 4/344 (1%) Strand = Plus / Plus Query: 5 catcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacgc 64 |||||||| |||||| ||||||| |||||||||| |||||||||||| |||||||| | Sbjct: 739 catcgacgccatcgagcgcctctgctgcgaccgcgcgctcgccgccttcggcctcgac-c 797 Query: 65 cgcctc-ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcct 123 || | | |||||||||||||||||||||||||||| || | ||||||||||||||| || Sbjct: 798 cgtcgcgctggggcgtcaacgtgcagccctactcctgcacctccgccaacttcgccgtct 857 Query: 124 acaccgcgctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggac 183 |||| | ||||||| ||| ||||| |||||||||| |||||| || |||||||| | Sbjct: 858 acacggggctcctcctccccaacgacaggatcatgggcctcgactcgccgtccggcggcc 917 Query: 184 acctcacccacggctactacaccgccggggggaagaagatctccgccacctccatctact 243 || ||| |||||| |||||||| || | || |||||| |||||| | ||||||||| || Sbjct: 918 acgtcagccacgggtactacacgcccagcggcaagaaggtctccggcgcctccatcttct 977 Query: 244 tcgagagcctgccctacaaggtcagcgccgc-caacggctacatcgactacgacaagctc 302 |||||| ||| |||||| ||| | | |||| || ||| |||||||| ||||| ||| | Sbjct: 978 tcgagaacctctcctacagggtgaac-ccgcacaccgggtacatcgattacgataaggta 1036 Query: 303 gaggagaaggccatggacttccgccccaagctcatcatctgcgg 346 |||||||||||| |||| |||| ||||||| | |||||||||| Sbjct: 1037 gaggagaaggccgtggatttccaccccaagattctcatctgcgg 1080
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds Length = 68460 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Minus Query: 4 tcatcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacg 63 |||||||| ||||||| ||| | |||||| ||||| ||| ||||||||| |||||||| Sbjct: 22354 tcatcgaccagatcgaaaacatttgccgctcacgcgctctcaccgccttccacctcgacg 22295 Query: 64 ccgcctcctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcct 123 ||||| |||||||||||||||| || || |||||||| || || || || ||||| || | Sbjct: 22294 ccgccacctggggcgtcaacgttcaaccttactccggttcaccggcgaatttcgctgctt 22235 Query: 124 acaccgc 130 ||||||| Sbjct: 22234 acaccgc 22228
>emb|Z11846.1|OCCSERHMT O.cuniculus mRNA for cytosolic serine hydroxymethyltransferase Length = 2261 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccg 120 ||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 485 ctggggcgtcaacgtgcagccctactcaggctcccccgccaacttcgccg 534 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 279 ggctacatcgactacgacaagctcgaggagaa 310 |||||||||||||||||| ||| |||||||| Sbjct: 690 ggctacatcgactacgaccggctggaggagaa 721
>ref|XM_752007.1| Ustilago maydis 521 hypothetical protein (UM00953.1) partial mRNA Length = 1533 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgc 130 ||||||||||||||| ||||| ||||| ||||| |||||||||| || ||| |||||| Sbjct: 432 ctggggcgtcaacgttcagccttactctggctccaccgccaactttgctaccttcaccgc 491 Query: 131 gctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcac 190 |||||| | || || ||||| |||||||| |||| ||| || ||||| || ||| | || Sbjct: 492 cctcctccagccccaggaccgtatcatgggtctcggccttccttccggtggccacttgac 551 Query: 191 ccacggctactacaccgcc 209 ||| || |||||||||||| Sbjct: 552 ccatggttactacaccgcc 570 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 337 tcatctgcggtggcagcgcctaccccagggactgggactacgccaagct 385 ||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 695 tcatctgcggtggttccgcctacccccgtgactgggactacgccaagct 743
>ref|XM_463512.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1803 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 5 catcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacgc 64 |||||||| |||||| |||||||| || |||||||||||||||||| | |||||| | Sbjct: 618 catcgacggcatcgagcgcctctgccatgagcgcgccctcgccgccttcggtctcgaccc 677 Query: 65 cgcctcctggggcgtcaacgtgcagccctactcc 98 ||||| |||||| |||||||| ||||| |||||| Sbjct: 678 cgcctgctggggggtcaacgtccagccatactcc 711
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 5 catcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacgc 64 |||||||| |||||| |||||||| || |||||||||||||||||| | |||||| | Sbjct: 37956748 catcgacggcatcgagcgcctctgccatgagcgcgccctcgccgccttcggtctcgaccc 37956807 Query: 65 cgcctcctggggcgtcaacgtgcagccctactcc 98 ||||| |||||| |||||||| ||||| |||||| Sbjct: 37956808 cgcctgctggggggtcaacgtccagccatactcc 37956841 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 44 cgccgccttccgcctcgacgccgcctcc 71 ||||||||||||||||| |||||||||| Sbjct: 32937109 cgccgccttccgcctcggcgccgcctcc 32937082 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 accgcgccctcgccgccttc 53 |||||||||||||||||||| Sbjct: 14111504 accgcgccctcgccgccttc 14111523
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 5 catcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacgc 64 |||||||| |||||| |||||||| || |||||||||||||||||| | |||||| | Sbjct: 37692 catcgacggcatcgagcgcctctgccatgagcgcgccctcgccgccttcggtctcgaccc 37751 Query: 65 cgcctcctggggcgtcaacgtgcagccctactcc 98 ||||| |||||| |||||||| ||||| |||||| Sbjct: 37752 cgcctgctggggggtcaacgtccagccatactcc 37785
>dbj|AK103554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132G05, full insert sequence Length = 2348 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 5 catcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacgc 64 |||||||| |||||| |||||||| || |||||||||||||||||| | |||||| | Sbjct: 927 catcgacggcatcgagcgcctctgccatgagcgcgccctcgccgccttcggtctcgaccc 986 Query: 65 cgcctcctggggcgtcaacgtgcagccctactcc 98 ||||| |||||| |||||||| ||||| |||||| Sbjct: 987 cgcctgctggggggtcaacgtccagccatactcc 1020
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0648C09 Length = 107522 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 5 catcgacgagatcgagaacctctgccgcgaccgcgccctcgccgccttccgcctcgacgc 64 |||||||| |||||| |||||||| || |||||||||||||||||| | |||||| | Sbjct: 53024 catcgacggcatcgagcgcctctgccatgagcgcgccctcgccgccttcggtctcgaccc 53083 Query: 65 cgcctcctggggcgtcaacgtgcagccctactcc 98 ||||| |||||| |||||||| ||||| |||||| Sbjct: 53084 cgcctgctggggggtcaacgtccagccatactcc 53117
>ref|XM_567297.1| Cryptococcus neoformans var. neoformans JEC21 glycine hydroxymethyltransferase (CNJ00410) partial mRNA Length = 2046 Score = 69.9 bits (35), Expect = 7e-09 Identities = 113/139 (81%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgc 130 ||||||||||||||| ||||| ||||| || || |||||||||| ||||| | ||| || Sbjct: 776 ctggggcgtcaacgtccagccttactctggttccaccgccaactttgccgctttcactgc 835 Query: 131 gctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcac 190 ||| ||||||| || ||||| | ||||| |||| || ||| ||| || |||||||| Sbjct: 836 tctcatcaacccccaggaccgagtgatgggtctcggtcttcccgacggtggtcacctcac 895 Query: 191 ccacggctactacaccgcc 209 |||||| |||||||||||| Sbjct: 896 ccacggttactacaccgcc 914
>gb|BC013677.2| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:9375 IMAGE:3863368), complete cds Length = 1972 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 470 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 529 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 530 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 589 Query: 192 cacggctac 200 ||||||||| Sbjct: 590 cacggctac 598
>gb|BC032584.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:45240 IMAGE:5499481), complete cds Length = 1945 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 479 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 538 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 539 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 598 Query: 192 cacggctac 200 ||||||||| Sbjct: 599 cacggctac 607
>gb|BC008711.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone IMAGE:3530697), partial cds Length = 2364 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 588 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 647 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 648 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 707 Query: 192 cacggctac 200 ||||||||| Sbjct: 708 cacggctac 716
>ref|NM_005412.4| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2), mRNA Length = 2113 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 410 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 469 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 470 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 529 Query: 192 cacggctac 200 ||||||||| Sbjct: 530 cacggctac 538
>emb|BX647711.1|HSM807857 Homo sapiens mRNA; cDNA DKFZp686P09201 (from clone DKFZp686P09201) Length = 2066 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 527 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 586 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 587 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 646 Query: 192 cacggctac 200 ||||||||| Sbjct: 647 cacggctac 655
>gb|BT008088.1| Synthetic construct Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) mRNA, partial cds Length = 1515 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 400 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 459 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 460 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 519 Query: 192 cacggctac 200 ||||||||| Sbjct: 520 cacggctac 528
>gb|BT006866.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) mRNA, complete cds Length = 1515 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 400 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 459 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 460 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 519 Query: 192 cacggctac 200 ||||||||| Sbjct: 520 cacggctac 528
>gb|BC044211.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:49833 IMAGE:5521082), complete cds Length = 1942 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 446 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 505 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 506 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 565 Query: 192 cacggctac 200 ||||||||| Sbjct: 566 cacggctac 574
>emb|CR613033.1| full-length cDNA clone CS0DA011YK08 of Neuroblastoma of Homo sapiens (human) Length = 2152 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 644 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 703 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 704 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 763 Query: 192 cacggctac 200 ||||||||| Sbjct: 764 cacggctac 772
>dbj|AK055053.1| Homo sapiens cDNA FLJ30491 fis, clone BRAWH2000177, moderately similar to SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL PRECURSOR (EC 2.1.2.1) Length = 3412 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 1096 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 1155 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 1156 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 1215 Query: 192 cacggctac 200 ||||||||| Sbjct: 1216 cacggctac 1224
>dbj|AK223555.1| Homo sapiens mRNA for serine hydroxymethyltransferase 2 (mitochondrial) variant, clone: FCC127B09 Length = 1964 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 468 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 527 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 528 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 587 Query: 192 cacggctac 200 ||||||||| Sbjct: 588 cacggctac 596
>gb|BC091501.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone IMAGE:30378499), partial cds Length = 2103 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 330 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 389 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 390 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 449 Query: 192 cacggctac 200 ||||||||| Sbjct: 450 cacggctac 458
>gb|AY892794.1| Synthetic construct Homo sapiens clone FLH024514.01L mitochondrial serine hydroxymethyltransferase 2 (SHMT2) mRNA, partial cds Length = 1515 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 400 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 459 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 460 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 519 Query: 192 cacggctac 200 ||||||||| Sbjct: 520 cacggctac 528
>gb|AY890325.1| Synthetic construct Homo sapiens clone FLH024518.01X serine hydroxymethyltransferase 2 (SHMT2) mRNA, complete cds Length = 1515 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 400 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 459 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 460 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 519 Query: 192 cacggctac 200 ||||||||| Sbjct: 520 cacggctac 528
>gb|AY890324.1| Synthetic construct Homo sapiens clone FLH024517.01X serine hydroxymethyltransferase 2 (SHMT2) mRNA, complete cds Length = 1515 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 400 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 459 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 460 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 519 Query: 192 cacggctac 200 ||||||||| Sbjct: 520 cacggctac 528
>gb|BC011911.2| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:20325 IMAGE:4139001), complete cds Length = 2113 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 410 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 469 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 470 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 529 Query: 192 cacggctac 200 ||||||||| Sbjct: 530 cacggctac 538
>gb|L11932.1|HUMSHMTB Human nuclear-encoded mitochondrial serine hydroxymethyltransferase (SHMT) mRNA, 3' end Length = 1792 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 311 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 370 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 371 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 430 Query: 192 cacggctac 200 ||||||||| Sbjct: 431 cacggctac 439
>ref|XM_509157.1| PREDICTED: Pan troglodytes serine hydroxymethyltransferase 2 (mitochondrial) (LOC452007), mRNA Length = 1461 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 448 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 507 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacct 169 || || | || |||||||||||||||||||| ||||| Sbjct: 508 cttctgcaacctcacgaccggatcatggggctggacct 545
>gb|BC025355.1| Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone IMAGE:4905540) Length = 1492 Score = 60.0 bits (30), Expect = 7e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 87 cagccctactccggctcgcccgccaacttcgccgcctacaccgcgctcctcaacccgcac 146 |||||||||||||| || || |||||| | |||| |||||| || || || | || ||| Sbjct: 8 cagccctactccgggtccccagccaacctggccgtctacacagcccttctgcaacctcac 67 Query: 147 gaccggatcatggggctcgacctcccctccggcggacacctcacccacggctac 200 ||||||||||||||||| ||||| ||| || || || ||||||||||||||| Sbjct: 68 gaccggatcatggggctggacctgcccgatgggggccatctcacccacggctac 121
>gb|U23143.1|HSU23143 Human mitochondrial serine hydroxymethyltransferase gene, nuclear encoded mitochondrion protein, complete cds Length = 3869 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 1165 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 1224 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacct 169 || || | || |||||||||||||||||||| ||||| Sbjct: 1225 cttctgcaacctcacgaccggatcatggggctggacct 1262
>gb|AC137834.9| Homo sapiens 12 BAC RP11-123K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109523 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 60608 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 60549 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacct 169 || || | || |||||||||||||||||||| ||||| Sbjct: 60548 cttctgcaacctcacgaccggatcatggggctggacct 60511
>gb|BC008066.2| Homo sapiens cDNA clone IMAGE:3010445, containing frame-shift errors Length = 1922 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| |||||| || Sbjct: 420 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctacacagcc 479 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacct 169 || || | || |||||||||||||||||||| ||||| Sbjct: 480 cttctgcaacctcacgaccggatcatggggctggacct 517
>emb|CR857364.1| Pongo pygmaeus mRNA; cDNA DKFZp469E1432 (from clone DKFZp469E1432) Length = 1963 Score = 58.0 bits (29), Expect = 3e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || |||||||||||||| || || |||||| | |||| ||| || || Sbjct: 469 tggggagtcaatgtccagccctactccgggtccccagccaacctggccgtctatacagcc 528 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | || |||||||||||||||||||| ||||| ||| || || || |||||| Sbjct: 529 cttctgcaacctcacgaccggatcatggggctggacctgcccgatgggggccatctcacc 588 Query: 192 cacggctac 200 ||||||||| Sbjct: 589 cacggctac 597
>gb|AF442558.1| Chlamydomonas reinhardtii serine hydroxymethyltransferase (shmt) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2025 Score = 58.0 bits (29), Expect = 3e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 |||||||||||||||||| | || ||||||||| |||||||| | ||||| ||| Sbjct: 449 tggggcgtcaacgtgcagtcgctgtcgggctcgccctccaacttccaggtgtacacggcg 508 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || || | ||||||||||| ||||||| ||| ||||| ||| |||||| ||||||| | Sbjct: 509 ctgctgcagccgcacgaccgcatcatggcgctggacctgccccacggcggccacctcagc 568 Query: 192 cacggctac 200 ||||||||| Sbjct: 569 cacggctac 577 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 285 atcgactacgacaagctcgaggagaaggccatggacttccgccccaagctcat 337 ||||||||||||| ||| ||| ||| |||| || ||||||||||||||||| Sbjct: 659 atcgactacgacatgctggagaagacggccgtgctgttccgccccaagctcat 711 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 216 aagaagatctccgccacctccatctactt 244 ||||||||| |||||||||||||||||| Sbjct: 590 aagaagatcagcgccacctccatctactt 618
>ref|XM_954972.1| Neurospora crassa OR74A hypothetical protein (NCU05805.1) partial mRNA Length = 1584 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 279 ggctacatcgactacgacaagctcgaggagaaggccatggacttccgccccaagctcatc 338 ||||||||||||||| |||||||||||||| |||||| || |||||||||| ||||| Sbjct: 622 ggctacatcgactacaacaagctcgaggagctggccatcacctaccgccccaagatcatc 681
>ref|XM_325659.1| Neurospora crassa OR74A hypothetical protein (NCU05805.1) partial mRNA Length = 1584 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 279 ggctacatcgactacgacaagctcgaggagaaggccatggacttccgccccaagctcatc 338 ||||||||||||||| |||||||||||||| |||||| || |||||||||| ||||| Sbjct: 622 ggctacatcgactacaacaagctcgaggagctggccatcacctaccgccccaagatcatc 681
>gb|AF239165.1| Sus scrofa serine hydroxymethyltransferase (SHMT) mRNA, partial cds Length = 476 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgc 118 ||||||||||||||| ||||||||||| ||||| || || |||||||| Sbjct: 223 ctggggcgtcaacgtccagccctactcaggctcccctgcgaacttcgc 270
>dbj|AK109000.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-G10, full insert sequence Length = 2504 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 288 gactacgacaagctcgaggagaaggccatggacttccgccccaagctcatcatctgcggt 347 |||||||| ||||| |||||||||||| |||| | | | |||||||| |||||||| || Sbjct: 597 gactacgataagctggaggagaaggccctggagtacaggcccaagctgatcatctgtgga 656 Query: 348 ggcagcgc 355 |||||||| Sbjct: 657 ggcagcgc 664 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| |||||||||||||| ||| || || ||||| || ||||||||||| Sbjct: 384 tggggagtcaatgtgcagccctactctggcagtcctgcaaactttgcagcctacaccgcc 443 Query: 132 ctcctcaacccgcacgaccggatcatggg 160 || || | ||||| ||||| |||||||| Sbjct: 444 ctgctgcagccgcatgaccgcatcatggg 472
>ref|XM_846726.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 1 (soluble) isoform 2, transcript variant 2 (LOC489536), mRNA Length = 1601 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||||||||| Sbjct: 827 cgacatggcgcacatcagcgggctggt 853 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaactt 115 |||||| |||||||| ||||||||||| ||||| || |||||||| Sbjct: 476 ctggggggtcaacgtacagccctactcaggctcccctgccaactt 520
>ref|XM_546655.2| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 1 (soluble) isoform 2, transcript variant 1 (LOC489536), mRNA Length = 1601 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||||||||| Sbjct: 827 cgacatggcgcacatcagcgggctggt 853 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaactt 115 |||||| |||||||| ||||||||||| ||||| || |||||||| Sbjct: 476 ctggggggtcaacgtacagccctactcaggctcccctgccaactt 520
>ref|XM_859359.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 1 (soluble) isoform 2, transcript variant 5 (LOC489536), mRNA Length = 1361 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||||||||| Sbjct: 827 cgacatggcgcacatcagcgggctggt 853 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaactt 115 |||||| |||||||| ||||||||||| ||||| || |||||||| Sbjct: 476 ctggggggtcaacgtacagccctactcaggctcccctgccaactt 520
>ref|XM_859338.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 1 (soluble) isoform 2, transcript variant 4 (LOC489536), mRNA Length = 1484 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||||||||| Sbjct: 827 cgacatggcgcacatcagcgggctggt 853 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaactt 115 |||||| |||||||| ||||||||||| ||||| || |||||||| Sbjct: 476 ctggggggtcaacgtacagccctactcaggctcccctgccaactt 520
>ref|XM_859320.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 1 (soluble) isoform 2, transcript variant 3 (LOC489536), mRNA Length = 1559 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||||||||| Sbjct: 785 cgacatggcgcacatcagcgggctggt 811 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaactt 115 |||||| |||||||| ||||||||||| ||||| || |||||||| Sbjct: 476 ctggggggtcaacgtacagccctactcaggctcccctgccaactt 520
>emb|AJ427487.1|CVI427487 Chlorobium vibrioforme bchG gene for bacteriochlorophyll synthase, strain NCIB 8327 Length = 462 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 421 tctgcgacatggcgcacatcagcgggc 447 ||||||||||||||||||||||||||| Sbjct: 115 tctgcgacatggcgcacatcagcgggc 89
>ref|NM_001015914.2| Xenopus tropicalis serine hydroxymethyltransferase 1 (soluble) (shmt1), mRNA Length = 3118 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||||||||||||||||||||| Sbjct: 714 gacatggcgcacatcagcgggctggt 739
>emb|CR926419.2| Xenopus tropicalis finished cDNA, clone TGas107h21 Length = 3118 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||||||||||||||||||||| Sbjct: 714 gacatggcgcacatcagcgggctggt 739
>ref|NM_117463.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT4G13890 mRNA, complete cds Length = 1592 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 213 gggaagaagatctccgccacctccatctacttcgagagcctgccctacaaggt 265 |||||||| |||||||| ||||| |||||||| || | ||| ||||||||||| Sbjct: 435 gggaagaacatctccgcgacctcgatctactttgaaaaccttccctacaaggt 487
>emb|Y14487.1|HSY14487 Homo sapiens mRNA for cytosolic serine hydroxymethyltransferase, partial, clone pUS1214 Length = 1586 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 ||||||||||||||| ||||||||||| ||||| Sbjct: 875 ctggggcgtcaacgtccagccctactcaggctc 907 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 1227 gacatggctcacatcagcgggctggt 1252
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 213 gggaagaagatctccgccacctccatctacttcgagagcctgccctacaaggt 265 |||||||| |||||||| ||||| |||||||| || | ||| ||||||||||| Sbjct: 125397 gggaagaacatctccgcgacctcgatctactttgaaaaccttccctacaaggt 125345
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project) Length = 118718 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 213 gggaagaagatctccgccacctccatctacttcgagagcctgccctacaaggt 265 |||||||| |||||||| ||||| |||||||| || | ||| ||||||||||| Sbjct: 104305 gggaagaacatctccgcgacctcgatctactttgaaaaccttccctacaaggt 104253
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 421 tctgcgacatggcgcacatcagcgg 445 ||||||||||||||||||||||||| Sbjct: 1517379 tctgcgacatggcgcacatcagcgg 1517355
>gb|AY005137.1| Chlorobium tepidum BchG (bchG), RL28 (rl28), Rnh (rnh), Srm (srm), MesJ (mesJ), Psd (psd), and Sp5E (sp5E) genes, complete cds; MurG (murG) gene, partial cds; and unknown genes Length = 7323 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 421 tctgcgacatggcgcacatcagcgg 445 ||||||||||||||||||||||||| Sbjct: 794 tctgcgacatggcgcacatcagcgg 770
>gb|AY616084.1| Prototheca wickerhamii plastid glycine hydroxymethyltransferase mRNA, partial cds; nuclear gene for plastid product Length = 657 Score = 50.1 bits (25), Expect = 0.007 Identities = 100/125 (80%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 |||||||| || ||||||||| |||| ||||| ||||||||||| || | |||||||| Sbjct: 473 tggggcgtgaatgtgcagccccactcgggctcccccgccaactttgcagtgtacaccgcc 532 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacctcccctccggcggacacctcacc 191 || | || |||||||| |||||||| || ||||| ||| |||||| ||||| ||| Sbjct: 533 ctgttgtcgccacacgaccgcatcatgggcctggacctgccccacggcgggcacctgacc 592 Query: 192 cacgg 196 ||||| Sbjct: 593 cacgg 597
>emb|Y14485.1|HSY14485 Homo sapiens mRNA for cytosolic serine hydroxymethyltransferase, clone pUS1217 Length = 1867 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 ||||||||||||||| ||||||||||| ||||| Sbjct: 507 ctggggcgtcaacgtccagccctactcaggctc 539 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 859 gacatggctcacatcagcgggctggt 884
>ref|XM_511325.1| PREDICTED: Pan troglodytes similar to serine hydroxymethyltransferase 1 (soluble) isoform 1; cytoplasmic serine hydroxymethyltransferase (LOC454490), mRNA Length = 1087 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgc 118 |||||| |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 499 ctggggggtcaacgtccagccctactcaggctcccctgcaaacttcgc 546 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 851 gacatggctcacatcagcgggctggt 876
>gb|AC154051.2| Drosophila melanogaster clone BACR17E02, complete sequence Length = 168158 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 38 cgccctcgccgccttccgcctcga 61 |||||||||||||||||||||||| Sbjct: 158039 cgccctcgccgccttccgcctcga 158016
>ref|XM_463451.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1434 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 44 cgccgccttccgcctcgacgccgcctcc 71 ||||||||||||||||| |||||||||| Sbjct: 1342 cgccgccttccgcctcggcgccgcctcc 1315
>ref|XM_760824.1| Theileria parva strain Muguga chromosome 1 serine hydroxymethyltransferase (TP01_0390) partial mRNA Length = 1512 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 174 tccggcggacacctcacccacggctactacaccgcc 209 |||||||| |||||||||||||| ||||||| |||| Sbjct: 553 tccggcggtcacctcacccacgggtactacaacgcc 588
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 154 tcatggggctcgacctcccctccggcggacacctcacccacggc 197 ||||||||||||||||| || ||||||| ||||| || |||||| Sbjct: 2015985 tcatggggctcgacctcgccgccggcggtcacctgactcacggc 2016028
>ref|XM_779683.1| PREDICTED: Strongylocentrotus purpuratus similar to serine hydroxymethyltransferase 2 (mitochondrial) (LOC579575), mRNA Length = 1847 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaactt 115 |||||||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 437 tggggcgtcaacgtccagccatactctggctcaccagccaactt 480
>emb|CR857151.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1932 (from clone DKFZp469J1932) Length = 2432 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgc 118 |||||| |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 417 ctggggggtcaacgtccagccctactcaggctcccctgcaaacttcgc 464 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 769 gacatggctcacatcagcgggctggt 794
>gb|AC108480.3| Drosophila melanogaster X BAC RP98-2A13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175996 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 38 cgccctcgccgccttccgcctcga 61 |||||||||||||||||||||||| Sbjct: 30344 cgccctcgccgccttccgcctcga 30321
>ref|NM_166976.1| Drosophila melanogaster CG32791-RA (CG32791), mRNA Length = 3589 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 38 cgccctcgccgccttccgcctcga 61 |||||||||||||||||||||||| Sbjct: 1452 cgccctcgccgccttccgcctcga 1429
>gb|BT003528.1| Drosophila melanogaster RE16159 full insert cDNA Length = 3590 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 38 cgccctcgccgccttccgcctcga 61 |||||||||||||||||||||||| Sbjct: 1452 cgccctcgccgccttccgcctcga 1429
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 44 cgccgccttccgcctcgacgccgcctcc 71 ||||||||||||||||| |||||||||| Sbjct: 3337 cgccgccttccgcctcggcgccgcctcc 3310
>gb|AE003427.3| Drosophila melanogaster chromosome X, section 11 of 74 of the complete sequence Length = 213230 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 38 cgccctcgccgccttccgcctcga 61 |||||||||||||||||||||||| Sbjct: 174072 cgccctcgccgccttccgcctcga 174095
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 421 tctgcgacatggcgcacatcagcgggc 447 ||||||||||||||||||| ||||||| Sbjct: 1798508 tctgcgacatggcgcacatgagcgggc 1798482
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 183 cacctcacccacggctactacaccgcc 209 |||||||||||||| |||||||||||| Sbjct: 110569 cacctcacccacggttactacaccgcc 110595
>ref|XM_805202.1| Trypanosoma cruzi strain CL Brener serine hydroxymethyltransferase (Tc00.1047053510407.90) partial mRNA Length = 1386 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 atggggctcgacctcccctccggcggacacctcacccacggct 198 ||||| ||||||||||||||||| || ||||| || ||||||| Sbjct: 352 atgggtctcgacctcccctccggtggccacctgactcacggct 394
>ref|XM_812315.1| Trypanosoma cruzi strain CL Brener serine hydroxymethyltransferase (Tc00.1047053509937.150) partial mRNA Length = 1386 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 atggggctcgacctcccctccggcggacacctcacccacggct 198 ||||| ||||||||||||||||| || ||||| || ||||||| Sbjct: 352 atgggtctcgacctcccctccggtggccacctgactcacggct 394 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagcc 91 |||||||||||||||||||| Sbjct: 268 tggggcgtcaacgtgcagcc 287
>emb|CR730030.2|CNS0GQ8K Tetraodon nigroviridis full-length cDNA Length = 1390 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||| ||||| Sbjct: 309 cgacatggcgcacatcagcggcctggt 335
>emb|CR724892.2|CNS0GM9U Tetraodon nigroviridis full-length cDNA Length = 1389 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||| ||||| Sbjct: 308 cgacatggcgcacatcagcggcctggt 334
>emb|CR656348.2|CNS0F5EQ Tetraodon nigroviridis full-length cDNA Length = 1230 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||| ||||| Sbjct: 164 cgacatggcgcacatcagcggcctggt 190
>emb|CR651132.2|CNS0F1DU Tetraodon nigroviridis full-length cDNA Length = 1233 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||| ||||| Sbjct: 164 cgacatggcgcacatcagcggcctggt 190
>emb|CR638523.1|CNS0ERNL Tetraodon nigroviridis full-length cDNA Length = 1265 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||| ||||| Sbjct: 196 cgacatggcgcacatcagcggcctggt 222
>ref|XM_690298.1| PREDICTED: Danio rerio similar to phosphatidylinositol 4-kinase, catalytic, alpha polypeptide isoform 2 (LOC567011), mRNA Length = 957 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggt 451 ||||||||||||||||||||| ||||| Sbjct: 825 cgacatggcgcacatcagcggactggt 851
>gb|BC038598.1| Homo sapiens serine hydroxymethyltransferase 1 (soluble), transcript variant 1, mRNA (cDNA clone MGC:46169 IMAGE:4523709), complete cds Length = 2411 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 750 gacatggctcacatcagcgggctggt 775 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 398 ctggggggtcaacgtccagccctactcaggctc 430
>gb|BC007979.2| Homo sapiens serine hydroxymethyltransferase 1 (soluble), transcript variant 1, mRNA (cDNA clone MGC:15229 IMAGE:3687873), complete cds Length = 2407 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 739 gacatggctcacatcagcgggctggt 764 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 387 ctggggggtcaacgtccagccctactcaggctc 419
>ref|NM_004169.3| Homo sapiens serine hydroxymethyltransferase 1 (soluble) (SHMT1), transcript variant 1, mRNA Length = 2540 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 872 gacatggctcacatcagcgggctggt 897 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 520 ctggggggtcaacgtccagccctactcaggctc 552
>ref|NM_148918.1| Homo sapiens serine hydroxymethyltransferase 1 (soluble) (SHMT1), transcript variant 2, mRNA Length = 2423 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 872 gacatggctcacatcagcgggctggt 897 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 520 ctggggggtcaacgtccagccctactcaggctc 552
>ref|XM_504017.1| Yarrowia lipolytica CLIB122, YALI0E16346g predicted mRNA Length = 1416 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 219 aagatctccgccacctccatctacttcgagagcctgccctac 260 |||||||||||| ||||| ||||||||||| | |||||||| Sbjct: 451 aagatctccgccgtctccacctacttcgagaccatgccctac 492
>emb|Y14486.1|HSY14486 Homo sapiens mRNA for cytosolic serine hydroxymethyltransferase, clone pUS1206 Length = 2661 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 1004 gacatggctcacatcagcgggctggt 1029
>emb|X91902.1|OCSERHMTF O.cuniculus mRNA for serine hydroxymethyltransferase Length = 1862 Score = 44.1 bits (22), Expect = 0.40 Identities = 79/98 (80%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| |||||||| ||||||||||| || || || ||||| | || |||||||| || Sbjct: 438 tggggagtcaacgtccagccctactcggggtccccagccaatctggctgcctacacagcc 497 Query: 132 ctcctcaacccgcacgaccggatcatggggctcgacct 169 || || | || |||||||| ||||||||||| ||||| Sbjct: 498 cttctgcagcctcacgaccgcatcatggggctggacct 535
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 44.1 bits (22), Expect = 0.40 Identities = 46/54 (85%) Strand = Plus / Minus Query: 80 caacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcgct 133 |||||||||||| |||||||||| | || |||||||||| ||||||||||| Sbjct: 3635115 caacgtgcagccgcactccggctctcaggctaacttcgccgtttacaccgcgct 3635062
>emb|CR613144.1| full-length cDNA clone CS0DK008YG18 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1637 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 704 gacatggctcacatcagcgggctggt 729 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 352 ctggggggtcaacgtccagccctactcaggctc 384
>emb|CR594273.1| full-length cDNA clone CS0DC003YO14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1700 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 848 gacatggctcacatcagcgggctggt 873 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 496 ctggggggtcaacgtccagccctactcaggctc 528
>emb|CR592100.1| full-length cDNA clone CS0DC026YC17 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1656 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 781 gacatggctcacatcagcgggctggt 806 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 429 ctggggggtcaacgtccagccctactcaggctc 461
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 tgcagccctactccggctcgcc 106 |||||||||||||||||||||| Sbjct: 31222777 tgcagccctactccggctcgcc 31222756
>dbj|AK223552.1| Homo sapiens mRNA for serine hydroxymethyltransferase 1 (soluble) isoform 1 variant, clone: FCC126F02 Length = 2486 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 824 gacatggctcacatcagcgggctggt 849 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 472 ctggggggtcaacgtccagccctactcaggctc 504
>gb|AC127537.7| Homo sapiens chromosome 17, clone RP1-178F10, complete sequence Length = 131302 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 114414 gacatggctcacatcagcgggctggt 114389
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1734_E02 Length = 168566 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 tgcagccctactccggctcgcc 106 |||||||||||||||||||||| Sbjct: 102620 tgcagccctactccggctcgcc 102599
>emb|AJ427485.1|CLI427485 Chlorobium limicola bchG gene for bacteriochlorophyll synthase, strain UdG6038 Length = 462 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 tctgcgacatggcgcacatcag 442 |||||||||||||||||||||| Sbjct: 114 tctgcgacatggcgcacatcag 93
>emb|AL035367.5|HSF10178 Homo sapiens chromosome 17 sequence from PAC RP1-178F10 region D17S842-D17S953 map 17p11.2, complete sequence Length = 132486 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 115600 gacatggctcacatcagcgggctggt 115575
>emb|AL353997.3|HS37N07 Homo sapiens chromosome 17 from PAC RPCI-1 37N07 map 17p11.2 region D17S842-D17S953, complete sequence Length = 175103 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 8965 gacatggctcacatcagcgggctggt 8940
>gb|BC022874.1| Homo sapiens serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA clone MGC:24556 IMAGE:4108106), complete cds Length = 1653 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 743 gacatggctcacatcagcgggctggt 768 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 391 ctggggggtcaacgtccagccctactcaggctc 423
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Minus Query: 219 aagatctccgccacctccatctacttcgagagcctgccctac 260 |||||||||||| ||||| ||||||||||| | |||||||| Sbjct: 1943026 aagatctccgccgtctccacctacttcgagaccatgccctac 1942985
>gb|L11931.1|HUMSHMTA Human cytosolic serine hydroxymethyltransferase (SHMT) mRNA, complete cds Length = 1669 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 706 gacatggctcacatcagcgggctggt 731 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 354 ctggggggtcaacgtccagccctactcaggctc 386
>gb|L23928.1|HUMHSH Homo sapiens serine hydroxymethyltransferase mRNA, complete cds Length = 1599 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggt 451 |||||||| ||||||||||||||||| Sbjct: 694 gacatggctcacatcagcgggctggt 719 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ctggggcgtcaacgtgcagccctactccggctc 103 |||||| |||||||| ||||||||||| ||||| Sbjct: 342 ctggggggtcaacgtccagccctactcaggctc 374
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cgcgaccgcgccctcgccgcc 50 ||||||||||||||||||||| Sbjct: 3040294 cgcgaccgcgccctcgccgcc 3040274
>ref|XM_956710.1| Neurospora crassa OR74A hypothetical protein (NCU06531.1) partial mRNA Length = 1623 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cgcctcctggggcgtcaacgt 85 ||||||||||||||||||||| Sbjct: 618 cgcctcctggggcgtcaacgt 598
>ref|XM_326385.1| Neurospora crassa OR74A hypothetical protein (NCU06531.1) partial mRNA Length = 1623 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cgcctcctggggcgtcaacgt 85 ||||||||||||||||||||| Sbjct: 618 cgcctcctggggcgtcaacgt 598
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 162 ctcgacctcccctccggcggacacctcacccacggct 198 |||| ||| |||| |||||| |||||||||||||||| Sbjct: 153240 ctcggcctgccctacggcggccacctcacccacggct 153276
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 ccgcctcctggggcgtcaacg 84 ||||||||||||||||||||| Sbjct: 68135 ccgcctcctggggcgtcaacg 68155
>emb|AJ438779.1|EGO438779 Eremothecium gossypii SHM2 gene for serine hydroxypmethyltransferase Length = 2360 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggtcgccgc 457 |||||||||||||||| |||||||||||||| Sbjct: 1011 cgacatggcgcacatctcggggctggtcgccgc 1043
>gb|AE006027.1| Caulobacter crescentus CB15 section 353 of 359 of the complete genome Length = 10951 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 389 ggccatcgccgacaagatcggggccatgc 417 ||||||||||| | ||||||||||||||| Sbjct: 2675 ggccatcgccgccgagatcggggccatgc 2703
>gb|AF416720.1|AF416720 Mycobacterium parafortuitum undecaprenyl diphosphate synthase gene, complete cds Length = 1779 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cagcgggctggtcgccgcgca 460 ||||||||||||||||||||| Sbjct: 1662 cagcgggctggtcgccgcgca 1642
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 425 cgacatggcgcacatcagcgggctggtcgccgc 457 |||||||||||||||| |||||||||||||| Sbjct: 727623 cgacatggcgcacatctcggggctggtcgccgc 727591
>gb|AC084685.1|CBRMM14H7 Caenorhabditis briggsae cosmid MM14H7, complete sequence Length = 38199 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 caacttcgccgcctacaccgc 130 ||||||||||||||||||||| Sbjct: 31050 caacttcgccgcctacaccgc 31070
>emb|AJ427491.1|PCL427491 Pelodictyon clathratiforme bchG gene for bacteriochlorophyll synthase, isolate Lake Coromina Length = 439 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 421 tctgcgacatggcgcacatcagcgg 445 ||||||||||||||||||| ||||| Sbjct: 118 tctgcgacatggcgcacatgagcgg 94
>emb|AJ427490.1|PLU427490 Pelodictyon luteolum bchG gene for bacteriochlorophyll synthase, strain DSM273 Length = 466 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 421 tctgcgacatggcgcacatcagcgg 445 ||||||||||||||||||| ||||| Sbjct: 117 tctgcgacatggcgcacatgagcgg 93
>emb|AJ427486.1|CLI427486 Chlorobium limicola bchG gene for bacteriochlorophyll synthase, strain LL1402 Length = 461 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 421 tctgcgacatggcgcacatcagcgg 445 ||||||||||||||||||| ||||| Sbjct: 114 tctgcgacatggcgcacatgagcgg 90
>ref|NM_208970.1| Eremothecium gossypii ACR215Cp (ACR215C), mRNA Length = 1410 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 425 cgacatggcgcacatcagcgggctggtcgccgc 457 |||||||||||||||| |||||||||||||| Sbjct: 654 cgacatggcgcacatctcggggctggtcgccgc 686
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 cgcgaccgcgccctcgccgccttc 53 |||||||||||| ||||||||||| Sbjct: 2629258 cgcgaccgcgccatcgccgccttc 2629281
>gb|AC168047.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940115D9, complete sequence Length = 108001 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 caacgtgcagccctactccggctc 103 ||||||||||||| |||||||||| Sbjct: 18276 caacgtgcagcccaactccggctc 18253
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 cctctgccgcgaccgcgccctcgccgcc 50 |||| |||||| |||||||||||||||| Sbjct: 46481 cctccgccgcggccgcgccctcgccgcc 46508
>ref|XM_414824.1| PREDICTED: Gallus gallus similar to Shmt1-prov protein (LOC416520), mRNA Length = 2991 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaactt 115 ||||| |||||||| ||||||||||| || || ||||| ||||| Sbjct: 1312 tggggtgtcaacgtccagccctactcagggtcacccgctaactt 1355
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 cgccctcgccgccttccgcctcga 61 |||| ||||||||||||||||||| Sbjct: 2739205 cgccgtcgccgccttccgcctcga 2739228
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggtcgccgc 457 |||||||||||||| ||||||||||||||| Sbjct: 907377 gacatggcgcacattgccgggctggtcgccgc 907408
>ref|XM_853209.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 4 (LOC607458), mRNA Length = 2068 Score = 40.1 bits (20), Expect = 6.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || ||||||||||| ||||| ||||| || | || |||||||| || Sbjct: 416 tggggagtcaatgtccagccctactcaggctctcccgctaatctggctgcctacacagcc 475 Query: 132 ctcctcaacccgcacgaccggatcatggggct 163 ||||| | || || ||||| ||||||||||| Sbjct: 476 ctcctgcagcctcatgaccgaatcatggggct 507
>ref|XM_844151.1| PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 2 (LOC607458), mRNA Length = 2150 Score = 40.1 bits (20), Expect = 6.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaacttcgccgcctacaccgcg 131 ||||| ||||| || ||||||||||| ||||| ||||| || | || |||||||| || Sbjct: 416 tggggagtcaatgtccagccctactcaggctctcccgctaatctggctgcctacacagcc 475 Query: 132 ctcctcaacccgcacgaccggatcatggggct 163 ||||| | || || ||||| ||||||||||| Sbjct: 476 ctcctgcagcctcatgaccgaatcatggggct 507
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 154 tcatggggctcgacctcccctccggcggacacctcacccacggc 197 ||||||| ||||| ||| || ||||||| || |||||||||||| Sbjct: 2984867 tcatgggcctcgatctcgccgccggcggccatctcacccacggc 2984910
>emb|BX927150.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 3/10 Length = 348475 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 acaaggtcagcgccgccaac 278 |||||||||||||||||||| Sbjct: 235622 acaaggtcagcgccgccaac 235603
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 154 tcatggggctcgacctcccctccggcggacacctcacccacggc 197 ||||||| ||||| ||| || ||||||| || |||||||||||| Sbjct: 302834 tcatgggcctcgatctcgccgccggcggccatctcacccacggc 302877
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ccggcggacacctcacccacggct 198 ||||||| |||||||||||||||| Sbjct: 191829 ccggcggccacctcacccacggct 191852
>gb|AE011704.1| Xanthomonas axonopodis pv. citri str. 306, section 82 of 469 of the complete genome Length = 11626 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 426 gacatggcgcacatcagcgggctggtcgccgc 457 ||||||||||||||| ||| ||||||||||| Sbjct: 5535 gacatggcgcacatcgccggcctggtcgccgc 5566
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cagcgccgccaacggctaca 285 |||||||||||||||||||| Sbjct: 3301678 cagcgccgccaacggctaca 3301697
>gb|AY003872.1| Plasmodium vivax YAC 1H14, complete sequence Length = 199866 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ccgccaacttcgccgcctac 125 |||||||||||||||||||| Sbjct: 155575 ccgccaacttcgccgcctac 155594
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ccgcgccctcgccgccttcc 54 |||||||||||||||||||| Sbjct: 1994248 ccgcgccctcgccgccttcc 1994267
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 154 tcatggggctcgacctcccctccggcggacacctcacccacggc 197 ||||||||||||| ||| || ||||||| || || ||||||||| Sbjct: 3014941 tcatggggctcgatctcgccgccggcggccatctgacccacggc 3014984
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 aagctcgaggagaaggccatggac 320 ||||| |||||||||||||||||| Sbjct: 29195721 aagctggaggagaaggccatggac 29195698
>emb|BX950236.1| Gallus gallus finished cDNA, clone ChEST696d15 Length = 665 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 72 tggggcgtcaacgtgcagccctactccggctcgcccgccaactt 115 ||||| |||||||| ||||||||||| || || ||||| ||||| Sbjct: 375 tggggtgtcaacgtccagccctactcagggtcacccgctaactt 418
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 acaaggtcagcgccgccaac 278 |||||||||||||||||||| Sbjct: 932010 acaaggtcagcgccgccaac 931991
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 ccggcggacacctcacccacggct 198 ||||||| |||||||||||||||| Sbjct: 4241379 ccggcggccacctcacccacggct 4241356
>gb|AE004954.1| Pseudomonas aeruginosa PAO1, section 515 of 529 of the complete genome Length = 10058 Score = 40.1 bits (20), Expect = 6.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 390 gccatcgccgacaagatcggggccatgctcctctgcgacatggcgcacatcagcgggctg 449 ||||||||||||||| |||| || |||| || ||||||||| ||| || ||||||| Sbjct: 1492 gccatcgccgacaaggtcggcgcgctgctgttcgtcgacatggcccacgtcgccgggctg 1551 Query: 450 gtcgccgc 457 |||||||| Sbjct: 1552 gtcgccgc 1559
>gb|AE004671.1| Pseudomonas aeruginosa PAO1, section 232 of 529 of the complete genome Length = 10746 Score = 40.1 bits (20), Expect = 6.3 Identities = 56/68 (82%) Strand = Plus / Minus Query: 390 gccatcgccgacaagatcggggccatgctcctctgcgacatggcgcacatcagcgggctg 449 ||||||||||||||| |||| || |||| || ||||||||| ||| || ||||||| Sbjct: 10081 gccatcgccgacaaggtcggcgcgctgctgttcgtcgacatggcccacgtcgccgggctg 10022 Query: 450 gtcgccgc 457 |||||||| Sbjct: 10021 gtcgccgc 10014
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 327 cccaagctcatcatctgcggtggcagcgccta 358 |||||||| ||||||||||| |||| |||||| Sbjct: 1168712 cccaagctgatcatctgcggcggcaccgccta 1168681
>gb|AY437689.1| Sonderopelta coriacea small subunit ribosomal RNA gene, partial sequence Length = 1780 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ccggctcgcccgccaacttc 116 |||||||||||||||||||| Sbjct: 632 ccggctcgcccgccaacttc 613
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ccggcggacacctcacccacggct 198 ||||||| |||||||||||||||| Sbjct: 1449621 ccggcggccacctcacccacggct 1449644
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gcccgccaacttcgccgcct 123 |||||||||||||||||||| Sbjct: 5704179 gcccgccaacttcgccgcct 5704198
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ccttccgcctcgacgccgcc 68 |||||||||||||||||||| Sbjct: 2119093 ccttccgcctcgacgccgcc 2119112
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1215_E11 Length = 105301 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 aagctcgaggagaaggccatggac 320 ||||| |||||||||||||||||| Sbjct: 63008 aagctggaggagaaggccatggac 62985
>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1102E12 Length = 155692 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 accgcgccctcgccgccttc 53 |||||||||||||||||||| Sbjct: 51218 accgcgccctcgccgccttc 51237
>dbj|AB116547.1| Streptomyces sp. J-13-3 chiA gene for chitinase, complete cds Length = 1289 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 cagcgggctggtcgccgcgc 459 |||||||||||||||||||| Sbjct: 699 cagcgggctggtcgccgcgc 718
>dbj|AK112072.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-G01, full insert sequence Length = 1137 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 aagctcgaggagaaggccatggac 320 ||||| |||||||||||||||||| Sbjct: 44 aagctggaggagaaggccatggac 21
>dbj|AK110999.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-E09, full insert sequence Length = 1274 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 aagctcgaggagaaggccatggac 320 ||||| |||||||||||||||||| Sbjct: 994 aagctggaggagaaggccatggac 1017
>gb|AY105851.1| Zea mays PCO072468 mRNA sequence Length = 1545 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 catcgactacgacaagctcg 303 |||||||||||||||||||| Sbjct: 209 catcgactacgacaagctcg 228
>emb|AJ278000.1|CFA278000 Canis familiaris partial pde6B gene for cGMP phosphodiesterase beta subunit, exons 9-12 Length = 2162 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 gccctcgccgccttccgcct 58 |||||||||||||||||||| Sbjct: 342 gccctcgccgccttccgcct 361
>gb|BC085331.1| Rattus norvegicus serine hydroxymethyl transferase 2 (mitochondrial), mRNA (cDNA clone MGC:105820 IMAGE:7106911), complete cds Length = 2075 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 gatctccgccacctccatctacttcgag 248 |||||| ||||||||||||| ||||||| Sbjct: 603 gatctctgccacctccatcttcttcgag 630
>gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 cttccgccccaagctcatca 339 |||||||||||||||||||| Sbjct: 552 cttccgccccaagctcatca 571
>ref|NM_001008322.1| Rattus norvegicus serine hydroxymethyl transferase 2 (mitochondrial) (Shmt2), mRNA Length = 2075 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 gatctccgccacctccatctacttcgag 248 |||||| ||||||||||||| ||||||| Sbjct: 603 gatctctgccacctccatcttcttcgag 630
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ccggcggacacctcacccacggct 198 ||||||| |||||||||||||||| Sbjct: 1126709 ccggcggccacctcacccacggct 1126732
>gb|L33463.1|MTBGLYA Methylobacterium extorquens serine hydroxymethyltransferase (glyA) gene, complete cds Length = 1500 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 162 ctcgacctcccctccggcggacacctcacccacggc 197 ||||||||| | ||||||| ||||||||||||||| Sbjct: 586 ctcgacctcgcggccggcggccacctcacccacggc 621 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,709,221 Number of Sequences: 3902068 Number of extensions: 2709221 Number of successful extensions: 60618 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 57686 Number of HSP's gapped (non-prelim): 2872 length of query: 465 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 443 effective length of database: 17,147,199,772 effective search space: 7596209498996 effective search space used: 7596209498996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)