ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast73e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016304.1| Zea mays clone Contig137 mRNA sequence 147 4e-32
2gb|AY109752.1| Zea mays CL893_1 mRNA sequence 135 1e-28
3gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 109 8e-21
4dbj|AK068476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
5ref|XM_483207.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
7dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
8dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
9dbj|AK106964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
10gb|AY343976.1| Brachypodium sylvaticum fascilin-like gene, parti... 78 3e-11
11gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full... 72 2e-09
12ref|XM_472835.1| Oryza sativa (japonica cultivar-group), predic... 48 0.026
13emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 48 0.026
14emb|CR609945.1| full-length cDNA clone CS0DF003YB09 of Fetal bra... 48 0.026
15gb|AC091934.2| Homo sapiens chromosome 5 clone RP11-31J6, comple... 48 0.026
16dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
17dbj|AK110545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
18emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4,... 48 0.026
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
20dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
21gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.10
22emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327... 46 0.10
23emb|CR450821.7| Zebrafish DNA sequence from clone CH211-156B7 in... 44 0.41
24emb|AL591888.4| Human DNA sequence from clone RP11-333H8 on chro... 42 1.6
25gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
26gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.4
27gb|DQ217932.1| Homo sapiens triggering receptor expressed on mye... 40 6.4
28ref|XM_474621.1| Oryza sativa (japonica cultivar-group), predic... 40 6.4
29gb|AY710565.1| Uncultured Cycloclasticus sp. clone SIMO-1125 16S... 40 6.4
30gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, comp... 40 6.4
31ref|XM_414418.1| PREDICTED: Gallus gallus similar to MAGI1c alph... 40 6.4
32gb|BC013789.1| Homo sapiens nescient helix loop helix 1, mRNA (c... 40 6.4
33gb|AF432322.1| Uncultured gamma proteobacterium 0%N-26d-61 16S r... 40 6.4
34gb|DQ166069.1| Bos taurus isolate Bohai Black 5 D-loop, complete... 40 6.4
35gb|DQ166049.1| Bos taurus isolate Kazakh 1 D-loop, complete sequ... 40 6.4
36emb|AJ810692.1| Uncultured gamma proteobacterium 16S rRNA gene, ... 40 6.4
37emb|AJ810633.1| Uncultured gamma proteobacterium 16S rRNA gene, ... 40 6.4
38gb|AY354515.1| Streptomyces sp. HK803 PlmR5 (plmR5), PlmR4 (plmR... 40 6.4
39gb|AC109240.30| Mus musculus chromosome 1, clone RP23-445I23, co... 40 6.4
40gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence 40 6.4
41emb|AL445230.11| Human DNA sequence from clone RP11-517F10 on ch... 40 6.4
42gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.4
43gb|AF534241.1| Uncultured gamma proteobacterium clone gamma cg2 ... 40 6.4
44emb|AL133404.8| Human DNA sequence from clone RP1-238O23 on chro... 40 6.4
45emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
46gb|BT007547.1| Synthetic construct Homo sapiens nescient helix l... 40 6.4
47gb|BT006859.1| Homo sapiens nescient helix loop helix 1 mRNA, co... 40 6.4
48emb|AJ630712.1| Uncultured gamma proteobacterium partial 16S rRN... 40 6.4
49dbj|AB071994.1| Uncultured Cycloclasticus sp. gene for 16S rRNA,... 40 6.4
50dbj|AB071993.1| Uncultured Cycloclasticus sp. gene for 16S rRNA,... 40 6.4
51dbj|AB071992.1| Uncultured Cycloclasticus sp. gene for 16S rRNA,... 40 6.4
52dbj|AB071991.1| Uncultured Cycloclasticus sp. gene for 16S rRNA,... 40 6.4
53gb|AY536224.1| Uncultured bacterium clone LAgut-16S-P12 16S ribo... 40 6.4
54gb|AY026915.1| Cycloclasticus spirillensus 16S ribosomal RNA gen... 40 6.4
55dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
56dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
57dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
58gb|AY891682.1| Synthetic construct Homo sapiens clone FLH012862.... 40 6.4
59gb|AY889122.1| Synthetic construct Homo sapiens clone FLH012865.... 40 6.4
60dbj|AK120016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
61gb|AY580830.1| Uncultured gamma proteobacterium clone PI_4p11d 1... 40 6.4
62gb|AY580827.1| Uncultured gamma proteobacterium clone PI_RT101 1... 40 6.4
63gb|AY580820.1| Uncultured gamma proteobacterium clone PI_RT117 1... 40 6.4
64gb|AF148215.1|AF148215 Cycloclasticus oligotrophus 16S ribosomal... 40 6.4
65dbj|AB086228.1| Dibenzofuran-degrading bacterium DBF-MAK gene fo... 40 6.4
66gb|AF093004.1|AF093004 Cycloclasticus sp. W 16S ribosomal RNA ge... 40 6.4
67gb|AF093003.1|AF093003 Cycloclasticus sp. E 16S ribosomal RNA ge... 40 6.4
68gb|AF093002.1|AF093002 Cycloclasticus sp. G 16S ribosomal RNA ge... 40 6.4
69gb|DQ234087.2| Uncultured proteobacterium clone DS002 16S riboso... 40 6.4
70gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.4
71gb|U12624.1|CPU12624 Cycloclasticus pugetii PS-1 16S rRNA gene 40 6.4
72gb|L34955.1|CYK16SR Cycloclasticus pugetii 16S ribosomal RNA (16... 40 6.4
73emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
74dbj|AB080114.1| Cycloclasticus sp. H4 gene for 16S rRNA, partial... 40 6.4
75dbj|AB080113.1| Cycloclasticus sp. E3 gene for 16S rRNA, partial... 40 6.4
76dbj|AB080112.1| Cycloclasticus sp. E2 gene for 16S rRNA, partial... 40 6.4
77dbj|AB080111.1| Cycloclasticus sp. A5 gene for 16S rRNA, partial... 40 6.4
78gb|U57920.1|CNU57920 Cycloclasticus N3-PA321 16S rRNA gene sequence 40 6.4
79ref|NM_005598.2| Homo sapiens nescient helix loop helix 1 (NHLH1... 40 6.4
80gb|M97507.1|HUMHEN1A Homo sapiens helix-loop-helix protein (HEN1... 40 6.4
81gb|M96739.1|HUMNSCL1A Human NSCL-1 mRNA sequence 40 6.4 
>gb|BT016304.1| Zea mays clone Contig137 mRNA sequence
          Length = 1191

 Score =  147 bits (74), Expect = 4e-32
 Identities = 147/170 (86%), Gaps = 1/170 (0%)
 Strand = Plus / Plus

                                                                       
Query: 304 cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 363
           ||||||||| ||| |||||||||||||| ||||| ||||||||||| ||||||||||| |
Sbjct: 219 cggcgccgcaccacgtggacctcgcggacctcctcagcgtggccgggccgttccacacgt 278

                                                                       
Query: 364 tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 423
           ||||||||||||| ||||||||| ||||| | ||||| ||||||||| ||||||||||||
Sbjct: 279 tcctggactacctgcagaagaccggcgtcatcgagaccttccagagccaggcgaacgaca 338

                                                             
Query: 424 ccaaggaggaggggatcaccatgttcgtgccc-aggactctgccttcgcg 472
           | |||  ||  || |||||| | ||||||||| ||||||| || ||||||
Sbjct: 339 cgaagcggggcggcatcaccgtcttcgtgcccaaggactcggcgttcgcg 388
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>gb|AY109752.1| Zea mays CL893_1 mRNA sequence
          Length = 1101

 Score =  135 bits (68), Expect = 1e-28
 Identities = 135/156 (86%), Gaps = 1/156 (0%)
 Strand = Plus / Plus

                                                                       
Query: 318 gtggacctcgcggatctcctgagcgtggccggcccgttccacaccttcctggactacctc 377
           |||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| 
Sbjct: 267 gtggacctcgcggacctcctcagcgtggccgggccgttccacacgttcctggactacctg 326

                                                                       
Query: 378 cagaagaccagcgtcctggagacgttccagagcaaggcgaacgacaccaaggaggagggg 437
           ||||||||| ||||| | ||||| ||||||||| ||||||||||||| |||  ||  || 
Sbjct: 327 cagaagaccggcgtcatcgagaccttccagagccaggcgaacgacacgaagcggggcggc 386

                                               
Query: 438 atcaccatgttcgtgccc-aggactctgccttcgcg 472
           |||||| | ||||||||| ||||||| || ||||||
Sbjct: 387 atcaccgtcttcgtgcccaaggactcggcgttcgcg 422
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>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0087J09, complete sequence
          Length = 153351

 Score =  109 bits (55), Expect = 8e-21
 Identities = 118/139 (84%)
 Strand = Plus / Minus

                                                                         
Query: 294   gcgccggctccggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccg 353
             |||||||| |||||||||| | | || |||||||| || ||||| ||||||||||| |||
Sbjct: 85528 gcgccggcgccggcgccgcactacgtcgacctcgccgagctcctcagcgtggccgggccg 85469

                                                                         
Query: 354   ttccacaccttcctggactacctccagaagaccagcgtcctggagacgttccagagcaag 413
             |||||||| |||||  |||||||  ||||||| | |||| | ||||||||||||||| ||
Sbjct: 85468 ttccacacgttcctcaactacctggagaagacgaacgtcatcgagacgttccagagccag 85409

                                
Query: 414   gcgaacgacaccaaggagg 432
             |||||| | ||||||||||
Sbjct: 85408 gcgaacaagaccaaggagg 85390
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>dbj|AK068476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151O19, full
           insert sequence
          Length = 900

 Score =  109 bits (55), Expect = 8e-21
 Identities = 118/139 (84%)
 Strand = Plus / Plus

                                                                       
Query: 294 gcgccggctccggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccg 353
           |||||||| |||||||||| | | || |||||||| || ||||| ||||||||||| |||
Sbjct: 240 gcgccggcgccggcgccgcactacgtcgacctcgccgagctcctcagcgtggccgggccg 299

                                                                       
Query: 354 ttccacaccttcctggactacctccagaagaccagcgtcctggagacgttccagagcaag 413
           |||||||| |||||  |||||||  ||||||| | |||| | ||||||||||||||| ||
Sbjct: 300 ttccacacgttcctcaactacctggagaagacgaacgtcatcgagacgttccagagccag 359

                              
Query: 414 gcgaacgacaccaaggagg 432
           |||||| | ||||||||||
Sbjct: 360 gcgaacaagaccaaggagg 378
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>ref|XM_483207.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1078

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Plus

                                                                       
Query: 304 cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 363
           ||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| |
Sbjct: 205 cggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgt 264

                                                                       
Query: 364 tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 423
           |||| |||  |||  |||||||   ||| ||   ||||||||||||| ||||||||| ||
Sbjct: 265 tcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggca 324

                  
Query: 424 ccaagga 430
            ||||||
Sbjct: 325 gcaagga 331
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                            
Query: 304      cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 363
                ||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| |
Sbjct: 24812012 cggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgt 24811953

                                                                            
Query: 364      tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 423
                |||| |||  |||  |||||||   ||| ||   ||||||||||||| ||||||||| ||
Sbjct: 24811952 tcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggca 24811893

                       
Query: 424      ccaagga 430
                 ||||||
Sbjct: 24811892 gcaagga 24811886
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>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1345_D02
          Length = 159613

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                          
Query: 304    cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 363
              ||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| |
Sbjct: 112813 cggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgt 112754

                                                                          
Query: 364    tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 423
              |||| |||  |||  |||||||   ||| ||   ||||||||||||| ||||||||| ||
Sbjct: 112753 tcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggca 112694

                     
Query: 424    ccaagga 430
               ||||||
Sbjct: 112693 gcaagga 112687
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>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1506_F01
          Length = 121202

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                         
Query: 304   cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 363
             ||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| |
Sbjct: 16458 cggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgt 16399

                                                                         
Query: 364   tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 423
             |||| |||  |||  |||||||   ||| ||   ||||||||||||| ||||||||| ||
Sbjct: 16398 tcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggca 16339

                    
Query: 424   ccaagga 430
              ||||||
Sbjct: 16338 gcaagga 16332
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>dbj|AK106964.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-F09, full
           insert sequence
          Length = 1077

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Plus

                                                                       
Query: 304 cggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccgttccacacct 363
           ||||||||||||| ||||||||||| || |||||||||||||| || ||||||||||| |
Sbjct: 205 cggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgt 264

                                                                       
Query: 364 tcctggactacctccagaagaccagcgtcctggagacgttccagagcaaggcgaacgaca 423
           |||| |||  |||  |||||||   ||| ||   ||||||||||||| ||||||||| ||
Sbjct: 265 tcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggca 324

                  
Query: 424 ccaagga 430
            ||||||
Sbjct: 325 gcaagga 331
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>gb|AY343976.1| Brachypodium sylvaticum fascilin-like gene, partial sequence
          Length = 842

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Plus

                                                                       
Query: 318 gtggacctcgcggatctcctgagcgtggccggcccgttccacaccttcctggactacctc 377
           |||||||| ||||  |||||| |||||||||| ||||||||||||||||||  |||||| 
Sbjct: 200 gtggacctggcggcgctcctgggcgtggccgggccgttccacaccttcctgagctacctg 259

                                                                  
Query: 378 cagaagaccagcgtcctggagacgttccagagcaaggcgaacgacaccaaggagg 432
           |||||||| | |||  | ||||| ||||||||  |||| ||| | ||||||||||
Sbjct: 260 cagaagacgaacgtgatcgagaccttccagaggcaggccaacaagaccaaggagg 314
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>gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full insert mRNA
           sequence
          Length = 954

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                       
Query: 294 gcgccggctccggcgccgcgccatgtggacctcgcggatctcctgagcgtggccggcccg 353
           |||||||| ||||| |||||| | |||||||| ||||  |||||   |||||||||||||
Sbjct: 164 gcgccggcgccggccccgcgctacgtggacctggcggcgctcctcgacgtggccggcccg 223

                                           
Query: 354 ttccacaccttcctggactacctccagaagac 385
           |||||||||||||| |  ||||| ||||||||
Sbjct: 224 ttccacaccttcctcggttacctgcagaagac 255
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>ref|XM_472835.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 792

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 289 ccccagcgccggctccggcgccgcgccatgtggacctcgc 328
           |||| |||||||| |||||||||||||| || ||||||||
Sbjct: 104 cccccgcgccggcgccggcgccgcgccacgtcgacctcgc 143



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 398 gacgttccagagcaaggcgaacgacacc 425
           ||||||||||||| |||| |||||||||
Sbjct: 213 gacgttccagagccaggccaacgacacc 240
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>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 289   ccccagcgccggctccggcgccgcgccatgtggacctcgc 328
             |||| |||||||| |||||||||||||| || ||||||||
Sbjct: 18543 cccccgcgccggcgccggcgccgcgccacgtcgacctcgc 18504



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 398   gacgttccagagcaaggcgaacgacacc 425
             ||||||||||||| |||| |||||||||
Sbjct: 18434 gacgttccagagccaggccaacgacacc 18407
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>emb|CR609945.1| full-length cDNA clone CS0DF003YB09 of Fetal brain of Homo sapiens
           (human)
          Length = 2166

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 282 ccgccgtccccagcgccggctccg 305
           ||||||||||||||||||||||||
Sbjct: 44  ccgccgtccccagcgccggctccg 21
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>gb|AC091934.2| Homo sapiens chromosome 5 clone RP11-31J6, complete sequence
          Length = 132832

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 282   ccgccgtccccagcgccggctccg 305
             ||||||||||||||||||||||||
Sbjct: 53044 ccgccgtccccagcgccggctccg 53021
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 289      ccccagcgccggctccggcgccgcgccatgtggacctcgc 328
                |||| |||||||| |||||||||||||| || ||||||||
Sbjct: 23575862 cccccgcgccggcgccggcgccgcgccacgtcgacctcgc 23575823



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 398      gacgttccagagcaaggcgaacgacacc 425
                ||||||||||||| |||| |||||||||
Sbjct: 23575753 gacgttccagagccaggccaacgacacc 23575726



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       tacaacaacttttatataaa 42
                ||||||||||||||||||||
Sbjct: 17593603 tacaacaacttttatataaa 17593622



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 278     cctcccgccgtccccagcgccggc 301
               |||||||||||||||| |||||||
Sbjct: 4721300 cctcccgccgtccccatcgccggc 4721323
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>dbj|AK110545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B08, full
           insert sequence
          Length = 1166

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 289 ccccagcgccggctccggcgccgcgccatgtggacctcgc 328
           |||| |||||||| |||||||||||||| || ||||||||
Sbjct: 176 cccccgcgccggcgccggcgccgcgccacgtcgacctcgc 215



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 398 gacgttccagagcaaggcgaacgacacc 425
           ||||||||||||| |||| |||||||||
Sbjct: 285 gacgttccagagccaggccaacgacacc 312
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>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21,
              complete sequence
          Length = 139298

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 289    ccccagcgccggctccggcgccgcgccatgtggacctcgc 328
              |||| |||||||| |||||||||||||| || ||||||||
Sbjct: 131765 cccccgcgccggcgccggcgccgcgccacgtcgacctcgc 131726



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 398    gacgttccagagcaaggcgaacgacacc 425
              ||||||||||||| |||| |||||||||
Sbjct: 131656 gacgttccagagccaggccaacgacacc 131629
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 281      cccgccgtccccagcgccggctccggcgccgcgcc 315
                |||| ||||||| |||||||| |||||||||||||
Sbjct: 26090187 cccgtcgtccccggcgccggcgccggcgccgcgcc 26090221
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>dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B02, full
            insert sequence
          Length = 1760

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 281  cccgccgtccccagcgccggctccggcgccgcgcc 315
            |||| ||||||| |||||||| |||||||||||||
Sbjct: 1411 cccgtcgtccccggcgccggcgccggcgccgcgcc 1445
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 281      cccgccgtccccagcgccggctccggcgccgcgcc 315
                |||| ||||||| |||||||| |||||||||||||
Sbjct: 26018363 cccgtcgtccccggcgccggcgccggcgccgcgcc 26018397
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>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161806

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 281   cccgccgtccccagcgccggctccggcgccgcgcc 315
             |||| ||||||| |||||||| |||||||||||||
Sbjct: 21484 cccgtcgtccccggcgccggcgccggcgccgcgcc 21450
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>emb|CR450821.7| Zebrafish DNA sequence from clone CH211-156B7 in linkage group 3,
             complete sequence
          Length = 163751

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 15    cttccccatacaacaacttttatata 40
             ||||||||||||||| ||||||||||
Sbjct: 13271 cttccccatacaacatcttttatata 13296
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>emb|AL591888.4| Human DNA sequence from clone RP11-333H8 on chromosome 1, complete
              sequence
          Length = 164200

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    gaccttcaagatgaggctcag 178
              |||||||||||||||||||||
Sbjct: 105742 gaccttcaagatgaggctcag 105722
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 295     cgccggctccggcgccgcgcc 315
               |||||||||||||||||||||
Sbjct: 2236326 cgccggctccggcgccgcgcc 2236346
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 294     gcgccggctccggcgccgcg 313
               ||||||||||||||||||||
Sbjct: 3072613 gcgccggctccggcgccgcg 3072594
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>gb|DQ217932.1| Homo sapiens triggering receptor expressed on myeloid cells 2 (TREM2)
            gene, complete cds
          Length = 8688

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  tgctctcctccccagcattc 236
            ||||||||||||||||||||
Sbjct: 6186 tgctctcctccccagcattc 6205
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>ref|XM_474621.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 278 cctcccgccgtccccagcgccggc 301
           |||||||||||||||| |||||||
Sbjct: 513 cctcccgccgtccccatcgccggc 490
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>gb|AY710565.1| Uncultured Cycloclasticus sp. clone SIMO-1125 16S ribosomal RNA
           gene, partial sequence
          Length = 275

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 155 gggcaaagcaggggaccttc 174
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>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence
          Length = 218755

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   aagatgaggctcagagcagg 184
             ||||||||||||||||||||
Sbjct: 29694 aagatgaggctcagagcagg 29713
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>ref|XM_414418.1| PREDICTED: Gallus gallus similar to MAGI1c alpha beta2 gamma
            (LOC416083), mRNA
          Length = 7647

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 284  gccgtccccagcgccggctccggc 307
            ||||||||||||||| ||||||||
Sbjct: 3146 gccgtccccagcgccagctccggc 3169
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>gb|BC013789.1| Homo sapiens nescient helix loop helix 1, mRNA (cDNA clone
           MGC:17696 IMAGE:3866861), complete cds
          Length = 2527

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 agcgccggctccggcgccgcgcca 316
           ||||||||| ||||||||||||||
Sbjct: 623 agcgccggcgccggcgccgcgcca 646
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>gb|AF432322.1| Uncultured gamma proteobacterium 0%N-26d-61 16S ribosomal RNA gene,
           partial sequence
          Length = 438

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 133 gggcaaagcaggggaccttc 152
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>gb|DQ166069.1| Bos taurus isolate Bohai Black 5 D-loop, complete sequence;
           mitochondrial
          Length = 910

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  tatataaacgcacgcccccc 54
           ||||||||||||||||||||
Sbjct: 884 tatataaacgcacgcccccc 903
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>gb|DQ166049.1| Bos taurus isolate Kazakh 1 D-loop, complete sequence;
           mitochondrial
          Length = 909

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  tatataaacgcacgcccccc 54
           ||||||||||||||||||||
Sbjct: 885 tatataaacgcacgcccccc 904
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>emb|AJ810692.1| Uncultured gamma proteobacterium 16S rRNA gene, isolate MZ-36.NAPH
          Length = 457

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 143 gggcaaagcaggggaccttc 162
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>emb|AJ810633.1| Uncultured gamma proteobacterium 16S rRNA gene, isolate MZ-04.ONR
          Length = 415

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 126 gggcaaagcaggggaccttc 145
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>gb|AY354515.1| Streptomyces sp. HK803 PlmR5 (plmR5), PlmR4 (plmR4), PlmR3 (plmR3),
             PlmR2 (plmR2), Plm8 (plm8), Plm4 (plm4), Plm5 (plm5), Plm6
             (plm6), Plm7 (plm7), PlmT8 (plmT8), PlmT7 (plmT7), PlmT6
             (plmT6), PlmT5 (plmT5), PlmT4 (plmT4), PlmT3 (plmT3),
             PlmT2 (plmT2), PlmT1 (plmT1), Plm1 (plm1), Plm2-3
             (plm2-3), PlmJK (plmJK), PlmL (plmL), ChcA (chcA), PlmM
             (plmM), PlmR1 (plmR1), PlmI (plmI), PlmS2 (plmS2), PlmS3
             (plmS3), and PlmS4 (plmS4) genes, complete cds
          Length = 76196

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   tccgccggcggccgtcctcc 282
             ||||||||||||||||||||
Sbjct: 35210 tccgccggcggccgtcctcc 35191
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>gb|AC109240.30| Mus musculus chromosome 1, clone RP23-445I23, complete sequence
          Length = 189545

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    aagatgaggctcagagcagg 184
              ||||||||||||||||||||
Sbjct: 108509 aagatgaggctcagagcagg 108490
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>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence
          Length = 338007

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    agaccagcgtcctggagacg 401
              ||||||||||||||||||||
Sbjct: 142086 agaccagcgtcctggagacg 142105
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>emb|AL445230.11| Human DNA sequence from clone RP11-517F10 on chromosome 1 Contains the
             5' end of the COPA gene for coatomer protein complex
             subunit alpha, the gene for nicastrin (KIAA0253), the
             NHLH1 gene for nescient helix loop helix 1, the VANGL2
             gene for vang-like 2 (van gogh, Drosophila) and a CpG
             island, complete sequence
          Length = 102345

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 293   agcgccggctccggcgccgcgcca 316
             ||||||||| ||||||||||||||
Sbjct: 31933 agcgccggcgccggcgccgcgcca 31956
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 295     cgccggctccggcgccgcgc 314
               ||||||||||||||||||||
Sbjct: 2276822 cgccggctccggcgccgcgc 2276803
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>gb|AF534241.1| Uncultured gamma proteobacterium clone gamma cg2 16S ribosomal RNA
           gene, partial sequence
          Length = 500

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 346 gggcaaagcaggggaccttc 327
to top
>emb|AL133404.8| Human DNA sequence from clone RP1-238O23 on chromosome 6 Contains part
             of the a novel gene, the gene for triggering receptor
             expressed on myeloid cells 2 (TREM2), a novel gene, part
             of a novel gene, a pseudogene similar to soluble adenylyl
             cyclase (SAC),, complete sequence
          Length = 91511

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   tgctctcctccccagcattc 236
             ||||||||||||||||||||
Sbjct: 41928 tgctctcctccccagcattc 41947
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>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06,
              complete sequence
          Length = 129608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 278    cctcccgccgtccccagcgccggc 301
              |||||||||||||||| |||||||
Sbjct: 111433 cctcccgccgtccccatcgccggc 111456
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>gb|BT007547.1| Synthetic construct Homo sapiens nescient helix loop helix 1 mRNA,
           partial cds
          Length = 402

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 agcgccggctccggcgccgcgcca 316
           ||||||||| ||||||||||||||
Sbjct: 194 agcgccggcgccggcgccgcgcca 217
to top
>gb|BT006859.1| Homo sapiens nescient helix loop helix 1 mRNA, complete cds
          Length = 402

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 agcgccggctccggcgccgcgcca 316
           ||||||||| ||||||||||||||
Sbjct: 194 agcgccggcgccggcgccgcgcca 217
to top
>emb|AJ630712.1| Uncultured gamma proteobacterium partial 16S rRNA gene, clone
           UNHYB_86
          Length = 460

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 278 gggcaaagcaggggaccttc 259
to top
>dbj|AB071994.1| Uncultured Cycloclasticus sp. gene for 16S rRNA, partial sequence,
           clone:CHO-11-48
          Length = 1527

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 179 gggcaaagcaggggaccttc 198
to top
>dbj|AB071993.1| Uncultured Cycloclasticus sp. gene for 16S rRNA, partial sequence,
           clone:CHO-11-34
          Length = 1526

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 179 gggcaaagcaggggaccttc 198
to top
>dbj|AB071992.1| Uncultured Cycloclasticus sp. gene for 16S rRNA, partial sequence,
           clone:CHO-11-4
          Length = 1529

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 182 gggcaaagcaggggaccttc 201
to top
>dbj|AB071991.1| Uncultured Cycloclasticus sp. gene for 16S rRNA, partial sequence,
           clone:CHO-11-2
          Length = 1528

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 182 gggcaaagcaggggaccttc 201
to top
>gb|AY536224.1| Uncultured bacterium clone LAgut-16S-P12 16S ribosomal RNA gene,
           partial sequence
          Length = 1409

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 178 gggcaaagcaggggaccttc 197
to top
>gb|AY026915.1| Cycloclasticus spirillensus 16S ribosomal RNA gene, partial
           sequence
          Length = 1496

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 175 gggcaaagcaggggaccttc 194
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 278      cctcccgccgtccccagcgccggc 301
                |||||||||||||||| |||||||
Sbjct: 16570884 cctcccgccgtccccatcgccggc 16570907
to top
>dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1460_H08
          Length = 113514

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   cctcccgccgtccccagcgccggc 301
             |||||||||||||||| |||||||
Sbjct: 91554 cctcccgccgtccccatcgccggc 91577
to top
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           BAC clone:B1109A06
          Length = 171438

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 278 cctcccgccgtccccagcgccggc 301
           |||||||||||||||| |||||||
Sbjct: 833 cctcccgccgtccccatcgccggc 856
to top
>gb|AY891682.1| Synthetic construct Homo sapiens clone FLH012862.01L nescient helix
           loop helix 1 (NHLH1) mRNA, partial cds
          Length = 402

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 agcgccggctccggcgccgcgcca 316
           ||||||||| ||||||||||||||
Sbjct: 194 agcgccggcgccggcgccgcgcca 217
to top
>gb|AY889122.1| Synthetic construct Homo sapiens clone FLH012865.01X nescient helix
           loop helix 1 (NHLH1) mRNA, complete cds
          Length = 402

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 agcgccggctccggcgccgcgcca 316
           ||||||||| ||||||||||||||
Sbjct: 194 agcgccggcgccggcgccgcgcca 217
to top
>dbj|AK120016.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-B09, full
           insert sequence
          Length = 1647

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 278 cctcccgccgtccccagcgccggc 301
           |||||||||||||||| |||||||
Sbjct: 96  cctcccgccgtccccatcgccggc 119
to top
>gb|AY580830.1| Uncultured gamma proteobacterium clone PI_4p11d 16S ribosomal RNA
           gene gene, partial sequence
          Length = 661

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 100 gggcaaagcaggggaccttc 119
to top
>gb|AY580827.1| Uncultured gamma proteobacterium clone PI_RT101 16S ribosomal RNA
           gene gene, partial sequence
          Length = 875

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 159 gggcaaagcaggggaccttc 178
to top
>gb|AY580820.1| Uncultured gamma proteobacterium clone PI_RT117 16S ribosomal RNA
           gene gene, partial sequence
          Length = 697

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 159 gggcaaagcaggggaccttc 178
to top
>gb|AF148215.1|AF148215 Cycloclasticus oligotrophus 16S ribosomal RNA gene, partial
           sequence
          Length = 1449

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 157 gggcaaagcaggggaccttc 176
to top
>dbj|AB086228.1| Dibenzofuran-degrading bacterium DBF-MAK gene for 16S rRNA, partial
           sequence
          Length = 1536

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 185 gggcaaagcaggggaccttc 204
to top
>gb|AF093004.1|AF093004 Cycloclasticus sp. W 16S ribosomal RNA gene, complete sequence
          Length = 1490

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 175 gggcaaagcaggggaccttc 194
to top
>gb|AF093003.1|AF093003 Cycloclasticus sp. E 16S ribosomal RNA gene, complete sequence
          Length = 1490

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 175 gggcaaagcaggggaccttc 194
to top
>gb|AF093002.1|AF093002 Cycloclasticus sp. G 16S ribosomal RNA gene, complete sequence
          Length = 1479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 175 gggcaaagcaggggaccttc 194
to top
>gb|DQ234087.2| Uncultured proteobacterium clone DS002 16S ribosomal RNA gene gene,
           partial sequence
          Length = 1540

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 182 gggcaaagcaggggaccttc 201
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 294     gcgccggctccggcgccgcg 313
               ||||||||||||||||||||
Sbjct: 1422615 gcgccggctccggcgccgcg 1422634
to top
>gb|U12624.1|CPU12624 Cycloclasticus pugetii PS-1 16S rRNA gene
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 180 gggcaaagcaggggaccttc 199
to top
>gb|L34955.1|CYK16SR Cycloclasticus pugetii 16S ribosomal RNA (16S rRNA) gene
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 180 gggcaaagcaggggaccttc 199
to top
>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05,
             complete sequence
          Length = 173950

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tacaacaacttttatataaa 42
             ||||||||||||||||||||
Sbjct: 74343 tacaacaacttttatataaa 74362
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>dbj|AB080114.1| Cycloclasticus sp. H4 gene for 16S rRNA, partial sequence
          Length = 1386

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 110 gggcaaagcaggggaccttc 129
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>dbj|AB080113.1| Cycloclasticus sp. E3 gene for 16S rRNA, partial sequence
          Length = 1460

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 183 gggcaaagcaggggaccttc 202
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>dbj|AB080112.1| Cycloclasticus sp. E2 gene for 16S rRNA, partial sequence
          Length = 1432

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 183 gggcaaagcaggggaccttc 202
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>dbj|AB080111.1| Cycloclasticus sp. A5 gene for 16S rRNA, partial sequence
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 59  gggcaaagcaggggaccttc 78
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>gb|U57920.1|CNU57920 Cycloclasticus N3-PA321 16S rRNA gene sequence
          Length = 1459

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 gggcaaagcaggggaccttc 164
           ||||||||||||||||||||
Sbjct: 162 gggcaaagcaggggaccttc 181
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>ref|NM_005598.2| Homo sapiens nescient helix loop helix 1 (NHLH1), mRNA
          Length = 2527

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 agcgccggctccggcgccgcgcca 316
           ||||||||| ||||||||||||||
Sbjct: 623 agcgccggcgccggcgccgcgcca 646
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>gb|M97507.1|HUMHEN1A Homo sapiens helix-loop-helix protein (HEN1) gene, complete cds
          Length = 600

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 agcgccggctccggcgccgcgcca 316
           ||||||||| ||||||||||||||
Sbjct: 392 agcgccggcgccggcgccgcgcca 415
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>gb|M96739.1|HUMNSCL1A Human NSCL-1 mRNA sequence
          Length = 2601

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 293 agcgccggctccggcgccgcgcca 316
           ||||||||| ||||||||||||||
Sbjct: 638 agcgccggcgccggcgccgcgcca 661


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,532,958
Number of Sequences: 3902068
Number of extensions: 3532958
Number of successful extensions: 82561
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81791
Number of HSP's gapped (non-prelim): 770
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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