>LYAM3_MOUSE (Q01102) P-selectin precursor (Granule membrane protein 140)|
           (GMP-140) (PADGEM) (Leukocyte-endothelial cell adhesion
           molecule 3) (LECAM3) (CD62P antigen)
          Length = 768

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 24/80 (30%), Positives = 30/80 (37%)
 Frame = +3

Query: 96  PCRSSRSHCQSLET*PAGCMAKRNPVATTXXXXXXXASSEPWPAGGASSTARTRGMGSWT 275
           P +     CQSLE  P G MA  +P+A            +P      S+T    G G W 
Sbjct: 254 PPKCDAVQCQSLEAPPHGTMACMHPIAAFAYDSSCKFECQPGYRARGSNTLHCTGSGQW- 312

Query: 276 LWTRTSAPASSPTARWCRPP 335
                S P  +  A  C PP
Sbjct: 313 -----SEPLPTCEAIACEPP 327

>RPOL_BPK11 (P18147) DNA-directed RNA polymerase (EC 2.7.7.6)|
          Length = 906

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
 Frame = +2

Query: 167 PRGDDTTPP----APARVLGTVASRWRELHGENSWDGLLDPLDPHLRSSIISYGEMVQAA 334
           P+G+D T      A  + +G     W ++HG N       P    ++    + G ++ +A
Sbjct: 457 PQGNDMTKGSLTLAKGKPIGLDGFYWLKIHGANCAGVDKVPFPERIKFIEENEGNILASA 516

Query: 335 YDGFN----TERRSPHCGACF-YAYEDLLAGVGVPHHGHNY 442
            D  N    T++ SP C   F + Y       GV HHG NY
Sbjct: 517 ADPLNNTWWTQQDSPFCFLAFCFEY------AGVKHHGLNY 551

>DIP2C_HUMAN (Q9Y2E4) Disco-interacting protein 2 homolog C|
          Length = 1556

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = +1

Query: 1   TTPASQQSQTLLAGSGRQHIDREDPTN*HLARHVVPPDPTANRWRHSQQAAWPR 162
           TT  +  S T   GSG  H   +     H+  H  PPD T     HS Q   P+
Sbjct: 172 TTSTTSSSSTQSGGSGAAHRLADVMAQTHIENHSAPPDVTTYTSEHSIQVERPQ 225

>Y4HP_RHISN (P50360) Hypothetical 61.7 kDa protein y4hP|
          Length = 552

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
 Frame = +2

Query: 119 LPIVGDIASRLHGQEKPRGDDTTPPAPARVLGTVASRWRELHGENSWDGLLDPL------ 280
           +P+   I + +   E+  GDDTT P  AR   T    W  +  +  + G   P       
Sbjct: 247 MPVFDLIEAHVFAAERLHGDDTTIPIQARDKCTTGRIWTYVCDDRPFGGTAPPAAIYYAS 306

Query: 281 ----DPHLRSSIISYGEMVQA-AYDGF 346
                 H +  +  YG ++Q+  Y+GF
Sbjct: 307 SDRRGEHPQKHLAGYGGILQSDCYNGF 333

>CIC_HUMAN (Q96RK0) Protein capicua homolog|
          Length = 1608

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +3

Query: 102 RSSRSHCQS-LET*PAGCMAKRNPVATTXXXXXXXASSEPWPAGGASSTARTRGMGSWTL 278
           RSS +HC+  L+  P G      PVA         +SS   PA  ++S A +  +GS T 
Sbjct: 500 RSSFTHCRPPLDPEPPG--PPDPPVAFGKGYGSAPSSSASSPASSSASAATSFSLGSGTF 557

Query: 279 WTRTSAPASSPTARWCRPPTTG 344
             + S   S  TA   RPP  G
Sbjct: 558 KAQESGQGS--TAGPLRPPPPG 577

>GUAA_MYCTU (P0A5A1) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 525

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
 Frame = +2

Query: 284 PHLRSSIISYGEMVQAAYDGFNTERRSPHCG-ACFYAYEDLLAGV----GVPHHGHNYQV 448
           P ++   +S+G+ V AA DGF+    S     A F A++  LAGV     V H  H  QV
Sbjct: 132 PEVQPVWMSHGDAVTAAPDGFDVVASSAGAPVAAFEAFDRRLAGVQYHPEVMHTPHGQQV 191

Query: 449 -TKFIYATSSL 478
            ++F++  + L
Sbjct: 192 LSRFLHDFAGL 202

>GUAA_MYCBO (P0A5A2) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 525

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
 Frame = +2

Query: 284 PHLRSSIISYGEMVQAAYDGFNTERRSPHCG-ACFYAYEDLLAGV----GVPHHGHNYQV 448
           P ++   +S+G+ V AA DGF+    S     A F A++  LAGV     V H  H  QV
Sbjct: 132 PEVQPVWMSHGDAVTAAPDGFDVVASSAGAPVAAFEAFDRRLAGVQYHPEVMHTPHGQQV 191

Query: 449 -TKFIYATSSL 478
            ++F++  + L
Sbjct: 192 LSRFLHDFAGL 202

>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +3

Query: 102 RSSRSHCQ-SLET*PAGCMAKRNPVATTXXXXXXXASSEPWPAGGASSTARTRGMGSWTL 278
           RSS +HC+ +L+  P G     +P A          SS   PA  + S + +  +GS T 
Sbjct: 500 RSSFTHCRPTLDPEPPG---PPDPPAAFSKGYGPTPSSSSSPASTSVSVSTSFSLGSGTF 556

Query: 279 WTRTSAPASSPTARWCRPPTTG 344
            T+ S   S  TA   RPP  G
Sbjct: 557 KTQESGQGS--TAVPLRPPPPG 576

>MYCL1_MOUSE (P10166) L-myc-1 proto-oncogene protein|
          Length = 368

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +3

Query: 213 EPWPAGGASSTARTRGMGSWTLWTRTSAPASSPTARW 323
           EPWP GGA   A +RG      W R  A        W
Sbjct: 62  EPWPGGGAGDEAESRGHSK--AWGRNYASIIRRDCMW 96

>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 551

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 52  QHIDREDPTN*HLARHVVPPDPTANRWRHSQQAAWPRETPWRRHD 186
           +H    D    HL+RHV P D   ++ R+   +    +   RRHD
Sbjct: 448 RHDSHRDHERHHLSRHVRPSDEGESKCRYEAHSHTRHDEHTRRHD 492

>GUAA_MYCPA (Q73U79) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 525

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
 Frame = +2

Query: 284 PHLRSSIISYGEMVQAAYDGFNTERRSPHCGACFYAYED---LLAGV----GVPHHGHNY 442
           P ++   +S+G+ V AA DGF     SP  GA   A+E+    LAGV     V H  H  
Sbjct: 132 PGVQPVWMSHGDAVTAAPDGFEVVASSP--GAVVAAFENRARRLAGVQYHPEVMHTPHGQ 189

Query: 443 QV-TKFIYATSSL 478
           QV ++F++  + L
Sbjct: 190 QVLSRFLHDFAGL 202

>ARGD_SYNEL (P59322) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 412

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 346 EPVVGGLHHLAVGDDAGAEVRVQRVQEPIPRVLAVELAPPAGHG 215
           +P+V G  ++   D    E  V  + +P P+V A+ L P  G G
Sbjct: 163 DPLVPGFAYVPYNDLGALEALVASLDQPQPQVAAILLEPLQGEG 206

>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase) (Isozyme 1B)
          Length = 348

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 32/113 (28%), Positives = 41/113 (36%), Gaps = 13/113 (11%)
 Frame = +3

Query: 36  RRQW*AAHRSRRSHELTPRAPCRSSR----SHCQSLET*PAGCMAKRNPVATTXXXXXXX 203
           RR     HR R S   T  +   SS     S   S  T  A    +  P           
Sbjct: 149 RRHRKPGHRRRTSTTSTSASSGSSSAGSTGSRWTSASTRGASTSPRATPPTWQRSTSMPP 208

Query: 204 ASSEPWP--------AGGAS-STARTRGMGSWTLWTRTSAPASSPTARWCRPP 335
           + + PWP        AG AS +T RTR   SW+  +  SA  ++   R   PP
Sbjct: 209 SRASPWPRYGRRWRTAGTASRTTTRTRTGRSWSTGSIVSAAPTAMPRRSTSPP 261

>ARGD_ANASP (P54752) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 427

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -2

Query: 346 EPVVGGLHHLAVGDDAGAEVRVQRVQEPIPRVLAVELAPPAGHG 215
           +P+V G H++   D +  E  +  + E   RV A+ + P  G G
Sbjct: 178 DPLVPGFHYVNYNDISAVEAAISELDEGDYRVAAILIEPLQGEG 221


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,394,384
Number of Sequences: 219361
Number of extensions: 1340661
Number of successful extensions: 4481
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4477
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)