>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1203

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +2

Query: 200  SGGSDPPPRCCGLRSRPSPAAGICILISTRRNHLRECREMCLHARELP 343
            S  S PPP  CG  S P+P+AG+         H  +     L + + P
Sbjct: 877  SSSSSPPPGACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSP 924

>UVRC_COLP3 (Q47Z18) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 639

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +2

Query: 299 LRECREMCLHARELPC--EGIGRVAAPLSALIDLDDTASQHHTAHLF 433
           +R+C +    AR  PC    +GR +AP    I +DD   Q + A LF
Sbjct: 166 IRQCEDSYYRARSRPCLQHQLGRCSAPCVDKISVDDYKEQVNLAKLF 212

>SYY_CHLCV (Q823H9) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 412

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 350 GIGRVAAPLSALIDLDDTASQHHTAHLFFMCF 445
           G+  V +P+SA +  D TA+  H  H   +CF
Sbjct: 20  GLDSVESPISAYLGFDPTAASLHIGHWIGICF 51

>TEGP_BHV1S (Q08098) Probable tegument protein|
          Length = 158

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
 Frame = +2

Query: 203 GGSDPPPRC---CGLRSRPSPAAGICILISTRRNHLRECREMCLHARELPCEGIGRVAAP 373
           GG  P P     C      S  AG  ++   R+   R  R  C+ A  L C G+G  AA 
Sbjct: 84  GGYVPVPAADADCYYSESDSETAGEFLIRMGRQQRRRHRRRRCMIAAALTCIGLGACAAA 143

Query: 374 LSA 382
            +A
Sbjct: 144 AAA 146

>SYY_CHLAB (Q5L661) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 412

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 350 GIGRVAAPLSALIDLDDTASQHHTAHLFFMCF 445
           G+  V+ P+SA +  D TA   H  H   +CF
Sbjct: 20  GLDNVSTPVSAYLGFDPTAPSLHIGHWIGICF 51

>SYY_CHLMU (Q9PKX8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 412

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 350 GIGRVAAPLSALIDLDDTASQHHTAHLFFMCF 445
           G+  + AP+SA +  D TA   H  H   +CF
Sbjct: 20  GLESLTAPVSAYLGFDPTAPSLHIGHWIGICF 51


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,295,694
Number of Sequences: 219361
Number of extensions: 953919
Number of successful extensions: 2622
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2619
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)