>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)|
           (IAA-Glu synthetase) ((Uridine
           5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl
           transferase)
          Length = 471

 Score = 35.4 bits (80), Expect = 0.073
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 111 APHLVFIPSAGMGHLLPFSRFIGALASEGVFDISVVT 221
           APH++ +P  G GH+ P  +F   LAS+GV    V T
Sbjct: 2   APHVLVVPFPGQGHMNPMVQFAKRLASKGVATTLVTT 38

>HQGT_RAUSE (Q9AR73) Hydroquinone glucosyltransferase (EC 2.4.1.218) (Arbutin|
           synthase)
          Length = 470

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 114 PHLVFIPSAGMGHLLPFSRFIGALASEGVFDISVVTALPT 233
           PH+  +P+ GMGHL+P   F   L     F ++ +  +PT
Sbjct: 5   PHIAMVPTPGMGHLIPLVEFAKRLVLRHNFGVTFI--IPT 42

>HQGT_ARATH (Q9M156) Probable hydroquinone glucosyltransferase (EC 2.4.1.218)|
           (Arbutin synthase)
          Length = 480

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 114 PHLVFIPSAGMGHLLPFSRF 173
           PH+  IPS GMGHL+P   F
Sbjct: 7   PHVAIIPSPGMGHLIPLVEF 26

>PHAA_PSEOL (P26494) Poly(3-hydroxyalkanoate) polymerase 1 (EC 2.3.1.-) (PHA|
           polymerase 1) (PHA synthase 1) (Polyhydroxyalkanoic acid
           synthase 1)
          Length = 559

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +3

Query: 297 IDFNLLPLDDATLAGTDPFLLRWESLRRSAHLLG 398
           ID   +  D  +LAGT+  +  W+S  RSAHL G
Sbjct: 434 IDLKQVKCDIYSLAGTNDHITPWQSCYRSAHLFG 467

>PHAC_PSEOL (P26496) Poly(3-hydroxyalkanoate) polymerase 2 (EC 2.3.1.-) (PHA|
           polymerase 2) (PHA synthase 2) (Polyhydroxyalkanoic acid
           synthase 2)
          Length = 560

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 297 IDFNLLPLDDATLAGTDPFLLRWESLRRSAHLLG 398
           ID   + LD  T+AG++  +  W+++ RSA LLG
Sbjct: 435 IDLQKVELDSFTVAGSNDHITPWDAVYRSALLLG 468

>RSP5_CAEEL (Q10021) Probable splicing factor, arginine/serine-rich 5|
           (RNA-binding protein srp-3) (CeSC35-2)
          Length = 208

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
 Frame = -3

Query: 340 PARVASSSGRRLKS--MRRMAGKEAKRAANCSASASETVGRAVTTEM-----SKTPSLAR 182
           P R + S  RR ++   RR   ++ KR+   S S S +  R+   E      S++PS  R
Sbjct: 87  PRRRSRSPRRRSRTPPRRRSRSRDRKRSRR-SRSRSSSRSRSPVRESRRRSESRSPSPKR 145

Query: 181 APMKREKGSRWPMPALG-MKTRCGAPP 104
              +    SR P+PA    +TR G+PP
Sbjct: 146 DLKREASRSRSPLPAKDRSRTRSGSPP 172

>AF9_CRYNE (Q5KB23) Protein AF-9 homolog|
          Length = 392

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = -3

Query: 343 VPARVASSSGRRLKSMRRMAGKEAKRAANCSASASETVGRAVTTEMSKTPSLARAPMKRE 164
           +PA+      +R     R  GK A R A+ +ASA  +    V T  + TP+ A+  +  E
Sbjct: 273 LPAKSRRPRDQREDYEARKKGKSAARGASVTASARASRAGTVDTAAAGTPAPAQIGIPGE 332

Query: 163 KGS 155
            GS
Sbjct: 333 PGS 335

>ACKA2_CLOPE (Q8XJN2) Acetate kinase 2 (EC 2.7.2.1) (Acetokinase 2)|
          Length = 398

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 24/93 (25%), Positives = 39/93 (41%)
 Frame = -3

Query: 343 VPARVASSSGRRLKSMRRMAGKEAKRAANCSASASETVGRAVTTEMSKTPSLARAPMKRE 164
           V A++A + G+ ++ ++ +         N ++ A+   G+ V T M  TP          
Sbjct: 187 VSAKIAEAMGKNIEDLKIITC----HLGNGASIAAIKNGKCVDTTMGFTP---------- 232

Query: 163 KGSRWPMPALGMKTRCGAPPPCFATGAIDELAW 65
                 +  L M TRCG   P   T  IDEL +
Sbjct: 233 ------LEGLVMGTRCGNIDPAVVTYLIDELGY 259

>NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)|
          Length = 2494

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -3

Query: 334 RVASSSGRRLKSMRRMAGKEAKRAANCSASASETVGRAVTTEMSKTPSLA 185
           + A+S GRR   + R    EA  AAN +++A  T   A TT  + T + A
Sbjct: 565 KTANSQGRRKGRITRSMASEAAAAANAASTA--TTAPATTTSTTATTTTA 612

>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 protein)|
          Length = 892

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
 Frame = -3

Query: 346 SVPARVASSSGRRLKSMRRMAGKEAK-RAANCSASASETVGRAVTTEMSKTPSLARAPMK 170
           SVP+   S   ++LKS + +  KE+   + NC  ++S T G +     + +P L  +   
Sbjct: 661 SVPSSPMSRKPQKLKSSKSLRPKESSGNSTNCQNASSSTSGGSGKKRKNSSPLLVHSSSS 720

Query: 169 REKGSRWPMPALGMKTRC----GAPPPCFATGA 83
               S         +  C    G P P   T +
Sbjct: 721 SSSSSSSSHSMESFRKNCVAHSGPPYPSTVTSS 753

>ASIP_BOVIN (Q29414) Agouti signaling protein precursor (ASP) (Agouti switch|
           protein)
          Length = 133

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = -3

Query: 211 EMSKTPSLARAPMKREKGSRWPMPALGMKTRCGAPPPCFATGAIDELAW----FVRSA 50
           E  K PS  +APMK    +R P P   + TR    PP  A    D  A+    F RSA
Sbjct: 68  EKKKRPSKRKAPMKNVARTRPPPPTPCVATRDSCKPP--APACCDPCAFCQCRFFRSA 123

>UFOG5_MANES (Q40287) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)|
           (Flavonol 3-O-glucosyltransferase 5) (UDP-glucose
           flavonoid 3-O-glucosyltransferase 5)
          Length = 487

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 114 PHLVFIPSAGMGHLLPFSRFIGALASEGVFDISV 215
           PH+V + S G+GHL+P       + +   FD+++
Sbjct: 10  PHIVLLSSPGLGHLIPVLELGKRIVTLCNFDVTI 43

>CWC22_DEBHA (Q6BU84) Pre-mRNA-splicing factor CWC22|
          Length = 637

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -3

Query: 325 SSSGRRLKSMRRMAGKEAKRAANCSASASETVGRAVTTEMSKTPSLARAPMKREKGSR 152
           S S  R +S  R   +   R    S   S++  R+ +T  S+  S +R+P +   GS+
Sbjct: 575 SRSRSRSRSRSRSRSRTGSRGRTMSRDRSKSFSRSRSTSRSRGESFSRSPSRLPTGSK 632

>UFOG_PETHY (Q43716) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)|
           (Flavonol 3-O-glucosyltransferase) (UDP-glucose
           flavonoid 3-O-glucosyltransferase) (Anthocyanin
           rhamnosyl transferase)
          Length = 473

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 96  KQGGGAPHLVFIPSAGMGHLLPFSRFIGALASEGVFDISVVTA 224
           K    A H+V  P    GH+ PF +    L+S GV  +S  TA
Sbjct: 6   KHSNDALHVVMFPFFAFGHISPFVQLANKLSSYGV-KVSFFTA 47

>NFAC4_HUMAN (Q14934) Nuclear factor of activated T-cells, cytoplasmic 4|
           (NF-ATc4) (NFATc4) (T cell transcription factor NFAT3)
           (NF-AT3)
          Length = 902

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 25/102 (24%), Positives = 37/102 (36%)
 Frame = -3

Query: 349 GSVPARVASSSGRRLKSMRRMAGKEAKRAANCSASASETVGRAVTTEMSKTPSLARAPMK 170
           G+ PA       RR  S + +A   ++  A+C+         +V       P  +R  + 
Sbjct: 319 GAPPAESIPQKTRRTSSEQAVALPRSEEPASCNGKLPLGAEESVAP-----PGGSRKEVA 373

Query: 169 REKGSRWPMPALGMKTRCGAPPPCFATGAIDELAWFVRSARE 44
                  P P    K R G   P F T A+  L W + S  E
Sbjct: 374 GMDYLAVPSPLAWSKARIGGHSPIFRTSALPPLDWPLPSQYE 415

>IGW1_HETFR (P83742) IgW chain C region, secreted form 1/3 (Fragment)|
          Length = 144

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -3

Query: 235 TVGRAVTTEMSKTPSLA--RAPMKREKGSRWPMPALGMKTRCGAPPPCFATGAIDELAW 65
           T G   T E+S   S    R  M+ +KG    +P  G  T C   PPC  +G + +L +
Sbjct: 61  TTGDVYTCEVSHAGSRFNDRISMRYQKGGTINLPVPGGNTPCTC-PPCSCSGCMPKLVY 118

>TIR3_YEAST (P40552) Cell wall protein TIR3 precursor|
          Length = 269

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -3

Query: 346 SVPARVASSSGRRLKSMRRMAGKEAKRAANCSASASETVGRAVTTEMSKTPSLARA 179
           S  +  ASSS     S    +  E+  AA+ SAS S +   +  +E +K+ S A++
Sbjct: 143 SESSSAASSSASESSSAASSSASESSSAASSSASESSSAASSSASEAAKSSSSAKS 198

>UPPP_NEIMB (Q9K0Z3) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl|
           pyrophosphate phosphatase) (Bacitracin resistance
           protein)
          Length = 273

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 126 FIPSAGMGHLLPFSRFIGALASEGVFDISV 215
           F+P +  GHL+ F   IG  ++  VF+I++
Sbjct: 21  FLPISSTGHLIVFGNLIGFHSNHKVFEIAI 50

>UPPP_NEIG1 (Q5F6K4) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl|
           pyrophosphate phosphatase) (Bacitracin resistance
           protein)
          Length = 273

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 126 FIPSAGMGHLLPFSRFIGALASEGVFDISV 215
           F+P +  GHL+ F   IG  ++  VF+I++
Sbjct: 21  FLPISSTGHLIVFGNLIGFHSNHKVFEIAI 50

>BFR2_EMENI (Q5AW04) Protein bfr2|
          Length = 576

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -3

Query: 337 ARVASSSGRRLKSMRRMAGKEAKRAANCS--ASASETVGRAVTTEMSKTPSLARAPMKRE 164
           A+VA +S  R +  + +A  +   AA  S  A A  T GRAV  + +   +L  A +K +
Sbjct: 220 AKVADTSDDRAQLRQLLATDQKTIAATISQAAKADATKGRAVKHQRATFDALLNARIKLQ 279

Query: 163 KG 158
           KG
Sbjct: 280 KG 281

>REXO4_USTMA (Q4PER6) RNA exonuclease 4 (EC 3.1.-.-)|
          Length = 375

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = -3

Query: 346 SVPARVASSSGRRLKSMRRMAGKEAKRAANCSASASETVGRAVTTEMSKTPSLAR--APM 173
           S  +  +SS+G   K++++  G +A   ++ SAS+S    R ++T  S  P   R  A  
Sbjct: 3   SAASSSSSSAGSNWKALKKTLGSDA---SSSSASSSTNNRRKLSTSESTKPKRTRLDAKE 59

Query: 172 KREKGSRWPMPA 137
           K  +GS+   PA
Sbjct: 60  KDAEGSKSCSPA 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.125    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,773,776
Number of Sequences: 219361
Number of extensions: 698733
Number of successful extensions: 3169
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3163
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)