ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast73d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
2dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
3dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
4gb|AY220652.1| Oryza sativa box C/D snoRNA J24.1, complete sequence 90 8e-15
5gb|AY220653.1| Oryza sativa box C/D snoRNA J24.2, complete sequence 82 2e-12
6dbj|AP006584.3| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
7dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
8dbj|AK071127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
9gb|AY107053.1| Zea mays PCO082530 mRNA sequence 56 1e-04
10dbj|AK106250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
11dbj|AB227238.1| Aspergillus oryzae cDNA, contig sequence: AoEST4102 46 0.10
12dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 46 0.10
13gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 44 0.40
14ref|NM_165696.1| Drosophila melanogaster CG1648-RB, transcript v... 44 0.40
15ref|NM_136674.2| Drosophila melanogaster CG1648-RA, transcript v... 44 0.40
16gb|AC007330.6|AC007330 Drosophila melanogaster, chromosome 2R, r... 44 0.40
17dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.40
18dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete... 44 0.40
19gb|AF440828.1| Streptomyces avermitilis Imp1 (imp1) gene, partia... 44 0.40
20gb|AY060755.1| Drosophila melanogaster GH20817 full insert cDNA 44 0.40
21gb|AE003832.4| Drosophila melanogaster chromosome 2R, section 18... 44 0.40
22gb|BT001839.1| Drosophila melanogaster RH51979 full insert cDNA 44 0.40
23gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipie... 42 1.6
24gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.6
25emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
26gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.6
27dbj|AB010439.1| Rhodococcus rhodochrous gene for steroid monooxy... 42 1.6
28ref|XM_960330.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
29ref|XM_331848.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
30gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 6.3
31gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.3
32gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 6.3
33gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.3
34gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.3
35dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.3
36ref|NM_209141.1| Eremothecium gossypii ADL308Cp (ADL308C), mRNA 40 6.3
37gb|AF466200.2| Sorghum bicolor putative protein kinase gene, par... 40 6.3
38gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.3

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  143 bits (72), Expect = 6e-31
 Identities = 272/338 (80%), Gaps = 3/338 (0%)
 Strand = Plus / Plus

                                                                            
Query: 114      ccgcacctcgtcttcatcccgagcgccggcatgggccacctgctccccttctcccgcttc 173
                |||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 10492354 ccgcacgtcgtcttcatcccgagcgccggcatgggccacctcctcccgttcttccgcttc 10492413

                                                                            
Query: 174      atcggcgccctcgccagcgagggcgtcttcgacatctccgtcgtcaccgccctcccgacg 233
                |||||||| ||  ||  | | | |||   |||||||||||||||||||| |||||| || 
Sbjct: 10492414 atcggcgcgctgtcctcccacgacgt---cgacatctccgtcgtcaccgtcctccccacc 10492470

                                                                            
Query: 234      gtctcggaggccgaggccgagcagttggccgccctcttcgcctccttccccgccatccgg 293
                || ||||  ||||||||||| || || |||  |||||||  |  |||||||  |||||| 
Sbjct: 10492471 gtgtcggccgccgaggccgaccacttcgcccgcctcttccacgacttccccagcatccgc 10492530

                                                                            
Query: 294      cgcatcgacttcaacctcctgccgctcgacgacgccacccttgccggcacggatcccttc 353
                ||| ||||||||||||| ||||||||||||| | ||    |  ||||| | || || |||
Sbjct: 10492531 cgcgtcgacttcaacctgctgccgctcgacgcctccgagttccccggcgccgacccgttc 10492590

                                                                            
Query: 354      ctcctgcgatgggagtccctgcgccgctccgctcatctcctcgggccgctcatcgccggc 413
                || || || |||||| ||||||||||||||   || |||||||  |||  ||||||||||
Sbjct: 10492591 ctgctccggtgggaggccctgcgccgctccatgcacctcctcgccccggccatcgccggc 10492650

                                                      
Query: 414      gccacgccacgcgcgtcggccatcgtcaccgacgtcac 451
                | | | || |||||  ||||| ||||||||||||||||
Sbjct: 10492651 gtcgccccgcgcgccacggccgtcgtcaccgacgtcac 10492688



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 131/159 (82%), Gaps = 3/159 (1%)
 Strand = Plus / Minus

                                                                            
Query: 114      ccgcacctcgtcttcatcccgagcgccggcatgggccacctgctccccttctcccgcttc 173
                |||||| |||| ||| ||||||||||||||||||||||||| ||||  |||| |||||||
Sbjct: 10432574 ccgcacgtcgtgttcgtcccgagcgccggcatgggccacctcctccagttcttccgcttc 10432515

                                                                            
Query: 174      atcggcgccctcgccagcgagggcgtcttcgacatctccgtcgtcaccgccctcccgacg 233
                |||||||| ||  ||  | | | |||   |||||||||||||||||||| | ||||||| 
Sbjct: 10432514 atcggcgcgctgtccgcccacgacgt---cgacatctccgtcgtcaccgtcttcccgacc 10432458

                                                       
Query: 234      gtctcggaggccgaggccgagcagttggccgccctcttc 272
                || || |  ||||||||||| || || ||||||||||||
Sbjct: 10432457 gtgtccgccgccgaggccgaccacttcgccgccctcttc 10432419



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                       
Query: 122      cgtcttcatcccgagcgccggcatgggccacctgctccc 160
                |||| ||||||||||||||||||||||||||||||||||
Sbjct: 10331206 cgtcctcatcccgagcgccggcatgggccacctgctccc 10331168



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                            
Query: 363      tgggagtccctgcgccgctccgctcatctcctcgggccgctcatcgccggcgccacgcca 422
                |||||| ||||||||||||||   || |||||||| ||| |||||||||||| ||| || 
Sbjct: 10432328 tgggaggccctgcgccgctccttgcacctcctcggcccggtcatcgccggcgtcaccccg 10432269

                                             
Query: 423      cgcgcgtcggccatcgtcaccgacgtcac 451
                ||||   |||||| |||||||||||||||
Sbjct: 10432268 cgcgtcacggccaccgtcaccgacgtcac 10432240



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 127      tcatcccgagcgccggcatgggccacctgctccccttc 164
                ||||||||||||||||||||||||||||  ||||||||
Sbjct: 10323059 tcatcccgagcgccggcatgggccacctcgtccccttc 10323096



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                         
Query: 114      ccgcacctcgtcttcatcccgagcgccggcatgggccacctgctccccttctcccgc 170
                |||||| ||||| || | || ||||||||||||||||||||| | |||||| |||||
Sbjct: 10397101 ccgcacgtcgtcctcctaccaagcgccggcatgggccacctggttcccttcacccgc 10397157



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>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1026E06
          Length = 162784

 Score =  143 bits (72), Expect = 6e-31
 Identities = 272/338 (80%), Gaps = 3/338 (0%)
 Strand = Plus / Plus

                                                                         
Query: 114   ccgcacctcgtcttcatcccgagcgccggcatgggccacctgctccccttctcccgcttc 173
             |||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 68968 ccgcacgtcgtcttcatcccgagcgccggcatgggccacctcctcccgttcttccgcttc 69027

                                                                         
Query: 174   atcggcgccctcgccagcgagggcgtcttcgacatctccgtcgtcaccgccctcccgacg 233
             |||||||| ||  ||  | | | |||   |||||||||||||||||||| |||||| || 
Sbjct: 69028 atcggcgcgctgtcctcccacgacgt---cgacatctccgtcgtcaccgtcctccccacc 69084

                                                                         
Query: 234   gtctcggaggccgaggccgagcagttggccgccctcttcgcctccttccccgccatccgg 293
             || ||||  ||||||||||| || || |||  |||||||  |  |||||||  |||||| 
Sbjct: 69085 gtgtcggccgccgaggccgaccacttcgcccgcctcttccacgacttccccagcatccgc 69144

                                                                         
Query: 294   cgcatcgacttcaacctcctgccgctcgacgacgccacccttgccggcacggatcccttc 353
             ||| ||||||||||||| ||||||||||||| | ||    |  ||||| | || || |||
Sbjct: 69145 cgcgtcgacttcaacctgctgccgctcgacgcctccgagttccccggcgccgacccgttc 69204

                                                                         
Query: 354   ctcctgcgatgggagtccctgcgccgctccgctcatctcctcgggccgctcatcgccggc 413
             || || || |||||| ||||||||||||||   || |||||||  |||  ||||||||||
Sbjct: 69205 ctgctccggtgggaggccctgcgccgctccatgcacctcctcgccccggccatcgccggc 69264

                                                   
Query: 414   gccacgccacgcgcgtcggccatcgtcaccgacgtcac 451
             | | | || |||||  ||||| ||||||||||||||||
Sbjct: 69265 gtcgccccgcgcgccacggccgtcgtcaccgacgtcac 69302



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 131/159 (82%), Gaps = 3/159 (1%)
 Strand = Plus / Minus

                                                                        
Query: 114  ccgcacctcgtcttcatcccgagcgccggcatgggccacctgctccccttctcccgcttc 173
            |||||| |||| ||| ||||||||||||||||||||||||| ||||  |||| |||||||
Sbjct: 9188 ccgcacgtcgtgttcgtcccgagcgccggcatgggccacctcctccagttcttccgcttc 9129

                                                                        
Query: 174  atcggcgccctcgccagcgagggcgtcttcgacatctccgtcgtcaccgccctcccgacg 233
            |||||||| ||  ||  | | | |||   |||||||||||||||||||| | ||||||| 
Sbjct: 9128 atcggcgcgctgtccgcccacgacgt---cgacatctccgtcgtcaccgtcttcccgacc 9072

                                                   
Query: 234  gtctcggaggccgaggccgagcagttggccgccctcttc 272
            || || |  ||||||||||| || || ||||||||||||
Sbjct: 9071 gtgtccgccgccgaggccgaccacttcgccgccctcttc 9033



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                        
Query: 363  tgggagtccctgcgccgctccgctcatctcctcgggccgctcatcgccggcgccacgcca 422
            |||||| ||||||||||||||   || |||||||| ||| |||||||||||| ||| || 
Sbjct: 8942 tgggaggccctgcgccgctccttgcacctcctcggcccggtcatcgccggcgtcaccccg 8883

                                         
Query: 423  cgcgcgtcggccatcgtcaccgacgtcac 451
            ||||   |||||| |||||||||||||||
Sbjct: 8882 cgcgtcacggccaccgtcaccgacgtcac 8854



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>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1066D09
          Length = 183999

 Score =  143 bits (72), Expect = 6e-31
 Identities = 272/338 (80%), Gaps = 3/338 (0%)
 Strand = Plus / Plus

                                                                         
Query: 114   ccgcacctcgtcttcatcccgagcgccggcatgggccacctgctccccttctcccgcttc 173
             |||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 29061 ccgcacgtcgtcttcatcccgagcgccggcatgggccacctcctcccgttcttccgcttc 29120

                                                                         
Query: 174   atcggcgccctcgccagcgagggcgtcttcgacatctccgtcgtcaccgccctcccgacg 233
             |||||||| ||  ||  | | | |||   |||||||||||||||||||| |||||| || 
Sbjct: 29121 atcggcgcgctgtcctcccacgacgt---cgacatctccgtcgtcaccgtcctccccacc 29177

                                                                         
Query: 234   gtctcggaggccgaggccgagcagttggccgccctcttcgcctccttccccgccatccgg 293
             || ||||  ||||||||||| || || |||  |||||||  |  |||||||  |||||| 
Sbjct: 29178 gtgtcggccgccgaggccgaccacttcgcccgcctcttccacgacttccccagcatccgc 29237

                                                                         
Query: 294   cgcatcgacttcaacctcctgccgctcgacgacgccacccttgccggcacggatcccttc 353
             ||| ||||||||||||| ||||||||||||| | ||    |  ||||| | || || |||
Sbjct: 29238 cgcgtcgacttcaacctgctgccgctcgacgcctccgagttccccggcgccgacccgttc 29297

                                                                         
Query: 354   ctcctgcgatgggagtccctgcgccgctccgctcatctcctcgggccgctcatcgccggc 413
             || || || |||||| ||||||||||||||   || |||||||  |||  ||||||||||
Sbjct: 29298 ctgctccggtgggaggccctgcgccgctccatgcacctcctcgccccggccatcgccggc 29357

                                                   
Query: 414   gccacgccacgcgcgtcggccatcgtcaccgacgtcac 451
             | | | || |||||  ||||| ||||||||||||||||
Sbjct: 29358 gtcgccccgcgcgccacggccgtcgtcaccgacgtcac 29395



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>gb|AY220652.1| Oryza sativa box C/D snoRNA J24.1, complete sequence
          Length = 222

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 131/159 (82%), Gaps = 3/159 (1%)
 Strand = Plus / Minus

                                                                       
Query: 114 ccgcacctcgtcttcatcccgagcgccggcatgggccacctgctccccttctcccgcttc 173
           |||||| |||| ||| ||||||||||||||||||||||||| ||||  |||| |||||||
Sbjct: 177 ccgcacgtcgtgttcgtcccgagcgccggcatgggccacctcctccagttcttccgcttc 118

                                                                       
Query: 174 atcggcgccctcgccagcgagggcgtcttcgacatctccgtcgtcaccgccctcccgacg 233
           |||||||| ||  ||  | | | |||   |||||||||||||||||||| | ||||||| 
Sbjct: 117 atcggcgcgctgtccgcccacgacgt---cgacatctccgtcgtcaccgtcttcccgacc 61

                                                  
Query: 234 gtctcggaggccgaggccgagcagttggccgccctcttc 272
           || || |  ||||||||||| || || ||||||||||||
Sbjct: 60  gtgtccgccgccgaggccgaccacttcgccgccctcttc 22



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>gb|AY220653.1| Oryza sativa box C/D snoRNA J24.2, complete sequence
          Length = 222

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 130/159 (81%), Gaps = 3/159 (1%)
 Strand = Plus / Minus

                                                                       
Query: 114 ccgcacctcgtcttcatcccgagcgccggcatgggccacctgctccccttctcccgcttc 173
           |||||| |||| ||| ||||||||||||||||||||||||| ||||  |||| |||||||
Sbjct: 172 ccgcacgtcgtgttcgtcccgagcgccggcatgggccacctcctccagttcttccgcttc 113

                                                                       
Query: 174 atcggcgccctcgccagcgagggcgtcttcgacatctccgtcgtcaccgccctcccgacg 233
           |||||||| ||  ||  | | | |||   ||||||||||||||||||||   ||||||| 
Sbjct: 112 atcggcgcgctgtccgcccacgacgt---cgacatctccgtcgtcaccgtattcccgacc 56

                                                  
Query: 234 gtctcggaggccgaggccgagcagttggccgccctcttc 272
           || || |  ||||||||||| || || ||||||||||||
Sbjct: 55  gtgtccgccgccgaggccgaccacttcgccgccctcttc 17



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>dbj|AP006584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1197G05
          Length = 130823

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                    
Query: 122   cgtcttcatcccgagcgccggcatgggccacctgctccc 160
             |||| ||||||||||||||||||||||||||||||||||
Sbjct: 38743 cgtcctcatcccgagcgccggcatgggccacctgctccc 38705



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 127   tcatcccgagcgccggcatgggccacctgctccccttc 164
             ||||||||||||||||||||||||||||  ||||||||
Sbjct: 30596 tcatcccgagcgccggcatgggccacctcgtccccttc 30633



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                       
Query: 114    ccgcacctcgtcttcatcccgagcgccggcatgggccacctgctccccttctcccgc 170
              |||||| ||||| || | || ||||||||||||||||||||| | |||||| |||||
Sbjct: 104638 ccgcacgtcgtcctcctaccaagcgccggcatgggccacctggttcccttcacccgc 104694



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>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0649C11
          Length = 138870

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                     
Query: 122    cgtcttcatcccgagcgccggcatgggccacctgctccc 160
              |||| ||||||||||||||||||||||||||||||||||
Sbjct: 135433 cgtcctcatcccgagcgccggcatgggccacctgctccc 135395



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 127    tcatcccgagcgccggcatgggccacctgctccccttc 164
              ||||||||||||||||||||||||||||  ||||||||
Sbjct: 127286 tcatcccgagcgccggcatgggccacctcgtccccttc 127323



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>dbj|AK071127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077L14, full
           insert sequence
          Length = 1584

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 127 tcatcccgagcgccggcatgggccacctgctccccttc 164
           ||||||||||||||||||||||||||||  ||||||||
Sbjct: 121 tcatcccgagcgccggcatgggccacctcgtccccttc 158



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>gb|AY107053.1| Zea mays PCO082530 mRNA sequence
          Length = 1763

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 126 ttcatcccgagcgccggcatgggccacctgctccccttctcccgcttcatcg 177
           |||||||| ||||| ||||||||||||||  |||| |||| |||||||||||
Sbjct: 96  ttcatcccaagcgctggcatgggccacctcatcccattcttccgcttcatcg 147



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 363 tgggagtccctgcgccgctccgctcatctcctcgggccgctcatcgccggcgccacgcca 422
           |||||| ||||||||||||| || || ||||| || ||||| || ||||||||| | |||
Sbjct: 336 tgggaggccctgcgccgctcagcgcacctcctgggcccgcttattgccggcgccgcccca 395

               
Query: 423 cgcg 426
           ||||
Sbjct: 396 cgcg 399



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>dbj|AK106250.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-E02, full
           insert sequence
          Length = 1733

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 114 ccgcacctcgtcttcatcccgagcgccggcatgggccacctgctccccttctcccgc 170
           |||||| ||||| || | || ||||||||||||||||||||| | |||||| |||||
Sbjct: 136 ccgcacgtcgtcctcctaccaagcgccggcatgggccacctggttcccttcacccgc 192



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>dbj|AB227238.1| Aspergillus oryzae cDNA, contig sequence: AoEST4102
          Length = 496

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 167 ccgcttcatcggcgccctcgcca 189
           |||||||||||||||||||||||
Sbjct: 359 ccgcttcatcggcgccctcgcca 381



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>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 167     ccgcttcatcggcgccctcgcca 189
               |||||||||||||||||||||||
Sbjct: 2012323 ccgcttcatcggcgccctcgcca 2012345



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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 324    gacgccacccttgccggcacgg 345
              ||||||||||||||||||||||
Sbjct: 350558 gacgccacccttgccggcacgg 350537



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>ref|NM_165696.1| Drosophila melanogaster CG1648-RB, transcript variant B (CG1648),
           mRNA
          Length = 818

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 245 cgaggccgagcagttggccgcc 266
           ||||||||||||||||||||||
Sbjct: 206 cgaggccgagcagttggccgcc 227



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>ref|NM_136674.2| Drosophila melanogaster CG1648-RA, transcript variant A (CG1648),
           mRNA
          Length = 979

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 245 cgaggccgagcagttggccgcc 266
           ||||||||||||||||||||||
Sbjct: 367 cgaggccgagcagttggccgcc 388



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>gb|AC007330.6|AC007330 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone
             BACR30G11, complete sequence
          Length = 166854

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 245   cgaggccgagcagttggccgcc 266
             ||||||||||||||||||||||
Sbjct: 23718 cgaggccgagcagttggccgcc 23697



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 244     ccgaggccgagcagttggccgc 265
               ||||||||||||||||||||||
Sbjct: 8759984 ccgaggccgagcagttggccgc 8759963



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 232     cggtctcggaggccgaggcc 251
               ||||||||||||||||||||
Sbjct: 7059628 cggtctcggaggccgaggcc 7059609



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    ccagcgagggcgtcttcgac 206
              ||||||||||||||||||||
Sbjct: 407171 ccagcgagggcgtcttcgac 407190



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>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome
          Length = 351911

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 120    ctcgtcttcatcccgagcgccg 141
              ||||||||||||||||||||||
Sbjct: 123998 ctcgtcttcatcccgagcgccg 123977



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>gb|AF440828.1| Streptomyces avermitilis Imp1 (imp1) gene, partial cds; Imp2 (imp2)
            gene, complete cds; and unknown genes
          Length = 7996

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 244  ccgaggccgagcagttggccgc 265
            ||||||||||||||||||||||
Sbjct: 7675 ccgaggccgagcagttggccgc 7654



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>gb|AY060755.1| Drosophila melanogaster GH20817 full insert cDNA
          Length = 973

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 245 cgaggccgagcagttggccgcc 266
           ||||||||||||||||||||||
Sbjct: 344 cgaggccgagcagttggccgcc 365



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>gb|AE003832.4| Drosophila melanogaster chromosome 2R, section 18 of 73 of the complete
              sequence
          Length = 242171

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 245    cgaggccgagcagttggccgcc 266
              ||||||||||||||||||||||
Sbjct: 206757 cgaggccgagcagttggccgcc 206736



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>gb|BT001839.1| Drosophila melanogaster RH51979 full insert cDNA
          Length = 901

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 245 cgaggccgagcagttggccgcc 266
           ||||||||||||||||||||||
Sbjct: 207 cgaggccgagcagttggccgcc 228



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>gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940136D9, complete sequence
          Length = 121820

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 328   ccacccttgccggcacggatc 348
             |||||||||||||||||||||
Sbjct: 89240 ccacccttgccggcacggatc 89260



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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 424     gcgcgtcggccatcgtcaccg 444
               |||||||||||||||||||||
Sbjct: 2098402 gcgcgtcggccatcgtcaccg 2098422



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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 424    gcgcgtcggccatcgtcaccg 444
              |||||||||||||||||||||
Sbjct: 260025 gcgcgtcggccatcgtcaccg 260045



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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 424     gcgcgtcggccatcgtcaccg 444
               |||||||||||||||||||||
Sbjct: 2065102 gcgcgtcggccatcgtcaccg 2065082



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>dbj|AB010439.1| Rhodococcus rhodochrous gene for steroid monooxygenase, complete
           cds
          Length = 1842

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 313 tgccgctcgacgacgccaccc 333
           |||||||||||||||||||||
Sbjct: 759 tgccgctcgacgacgccaccc 779



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>ref|XM_960330.1| Neurospora crassa OR74A hypothetical protein (NCU02650.1) partial
           mRNA
          Length = 1485

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 244 ccgaggccgagcagttggcc 263
           ||||||||||||||||||||
Sbjct: 62  ccgaggccgagcagttggcc 81



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>ref|XM_331848.1| Neurospora crassa OR74A hypothetical protein (NCU02650.1) partial
           mRNA
          Length = 1485

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 244 ccgaggccgagcagttggcc 263
           ||||||||||||||||||||
Sbjct: 62  ccgaggccgagcagttggcc 81



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 398    gccgctcatcgccggcgccacgcc 421
              |||||| |||||||||||||||||
Sbjct: 301244 gccgctgatcgccggcgccacgcc 301267



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 166     cccgcttcatcggcgccctcgcca 189
               ||||||||||||||||| ||||||
Sbjct: 2598315 cccgcttcatcggcgccgtcgcca 2598292



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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 331     cccttgccggcacggatccc 350
               ||||||||||||||||||||
Sbjct: 2584912 cccttgccggcacggatccc 2584931



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 322     acgacgccacccttgccggc 341
               ||||||||||||||||||||
Sbjct: 3361975 acgacgccacccttgccggc 3361956



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>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
              complete sequence
          Length = 1466886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     gcaaggcggaggcgcaccgc 117
              ||||||||||||||||||||
Sbjct: 154751 gcaaggcggaggcgcaccgc 154732



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 248     ggccgagcagttggccgccc 267
               ||||||||||||||||||||
Sbjct: 1526834 ggccgagcagttggccgccc 1526815



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    aggccgagcagttggccgcc 266
              ||||||||||||||||||||
Sbjct: 969744 aggccgagcagttggccgcc 969763



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>ref|NM_209141.1| Eremothecium gossypii ADL308Cp (ADL308C), mRNA
          Length = 522

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  gcaaggcggaggcgcaccgc 117
           ||||||||||||||||||||
Sbjct: 197 gcaaggcggaggcgcaccgc 216



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>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2,
              fertilization-independent endosperm proteins, hypothetical
              protein, putative non-LTR retroelement reverse
              transcriptase, OCL5 protein, tryptophan synthase
              beta-subunit, hypothetical proteins, putative AP
              endonuclease, putative RNA polymerase II complex component
              SRB7, putative beta-1,3-glucanase, hypothetical protein,
              TNP2-like protein, hypothetical protein, putative
              phosphate/phosphoenolpyruvate translocator, putative
              protein, hypothetical proteins, putative
              galactosyltransferase family, hypothetical protein,
              putative cytochrome P450 family, putative lipid transfer
              protein, putative photoreceptor-interacting protein, and
              hypothetical protein genes, complete cds; and hypothetical
              protein gene, partial cds
          Length = 202197

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 398    gccgctcatcgccggcgccacgccacgc 425
              ||||||| |||||| |||||||||||||
Sbjct: 178871 gccgctcgtcgccgtcgccacgccacgc 178898



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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     gaggccgaggccgagcagtt 259
               ||||||||||||||||||||
Sbjct: 2096583 gaggccgaggccgagcagtt 2096602


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,028,262
Number of Sequences: 3902068
Number of extensions: 3028262
Number of successful extensions: 67089
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65524
Number of HSP's gapped (non-prelim): 1558
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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