ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast73c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome... 115 1e-22
2dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
3gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 115 1e-22
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
5dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
6dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
7ref|XM_469744.1| Oryza sativa (japonica cultivar-group), mRNA 56 8e-05
8gb|AY644646.1| Oryza sativa (indica cultivar-group) putative qui... 56 8e-05
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 56 8e-05
10gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genom... 56 8e-05
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 56 8e-05
12dbj|AK110695.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
13ref|XM_652809.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.32
14gb|AF294228.1| Xanthomonas campestris pv. campestris phi-Lf phag... 44 0.32
15dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
16emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.32
17dbj|AK110532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
18gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.32
19emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.32
20emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.32
21emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112... 44 0.32
22gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
23gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 42 1.3
24emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.3
25dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
26dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
27dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
28dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
29dbj|AP004641.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
30dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.3
31dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
32gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 1.3
33gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
34ref|XM_482385.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.0
35ref|NM_194505.1| Oryza sativa (japonica cultivar-group) putative... 40 5.0
36ref|NM_184014.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
37gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
38ref|XM_366979.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 5.0
39gb|AY219173.1| Zea mays submergence induced protein SI397 mRNA, ... 40 5.0
40emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 5.0
41gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 5.0
42gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
43gb|CP000088.1| Thermobifida fusca YX, complete genome 40 5.0
44emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.0
45emb|AJ243504.1|LPE243504 Lolium perenne mRNA for pollen allergen... 40 5.0
46gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 40 5.0
47gb|AC099400.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
48dbj|AB193030.1| Corynebacterium glutamicum DNA, strain specific ... 40 5.0
49dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
50dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
51dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
52dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
53dbj|AK108540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
54dbj|AK106924.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
55emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769... 40 5.0
56gb|M38342.1|PPTKBG31 Poa pratensis pollen allergen (KBG 31) mRNA... 40 5.0 
>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19,
              complete sequence
          Length = 153276

 Score =  115 bits (58), Expect = 1e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                          
Query: 144    gccggagatgggcaagggcggcggctgcgtccccagcaagaagcgccagccgccagccac 203
              ||||| |||||| |||||||||||||||||||||||||||||||| |||||||| |||| 
Sbjct: 145886 gccggtgatggggaagggcggcggctgcgtccccagcaagaagcggcagccgccggccag 145945

                                            
Query: 204    caccgtcgccaccgcgccctcgtcgtcgtc 233
              ||||||||||  |||||| |||||||||||
Sbjct: 145946 caccgtcgccggcgcgccgtcgtcgtcgtc 145975



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                       
Query: 303    gctgcggctgtacatcgtgttctactccatgtacgggcacgtggaagcgctggcgcg 359
              ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 146036 gctgcggctgtacatcgtgttctactcgatgtacgggcacgtggaggcgctggcgcg 146092
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  115 bits (58), Expect = 1e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                            
Query: 144      gccggagatgggcaagggcggcggctgcgtccccagcaagaagcgccagccgccagccac 203
                ||||| |||||| |||||||||||||||||||||||||||||||| |||||||| |||| 
Sbjct: 15087267 gccggtgatggggaagggcggcggctgcgtccccagcaagaagcggcagccgccggccag 15087326

                                              
Query: 204      caccgtcgccaccgcgccctcgtcgtcgtc 233
                ||||||||||  |||||| |||||||||||
Sbjct: 15087327 caccgtcgccggcgcgccgtcgtcgtcgtc 15087356



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                         
Query: 303      gctgcggctgtacatcgtgttctactccatgtacgggcacgtggaagcgctggcgcg 359
                ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 15087417 gctgcggctgtacatcgtgttctactcgatgtacgggcacgtggaggcgctggcgcg 15087473



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 154      ggcaagggcggcggctgcgt 173
                ||||||||||||||||||||
Sbjct: 21290687 ggcaagggcggcggctgcgt 21290668



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 219    gccctcgtcgtcgtccgccaccgc 242
              ||||||||||||||||||| ||||
Sbjct: 265572 gccctcgtcgtcgtccgccgccgc 265595
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  115 bits (58), Expect = 1e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                            
Query: 144      gccggagatgggcaagggcggcggctgcgtccccagcaagaagcgccagccgccagccac 203
                ||||| |||||| |||||||||||||||||||||||||||||||| |||||||| |||| 
Sbjct: 15095508 gccggtgatggggaagggcggcggctgcgtccccagcaagaagcggcagccgccggccag 15095567

                                              
Query: 204      caccgtcgccaccgcgccctcgtcgtcgtc 233
                ||||||||||  |||||| |||||||||||
Sbjct: 15095568 caccgtcgccggcgcgccgtcgtcgtcgtc 15095597



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                         
Query: 303      gctgcggctgtacatcgtgttctactccatgtacgggcacgtggaagcgctggcgcg 359
                ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 15095658 gctgcggctgtacatcgtgttctactcgatgtacgggcacgtggaggcgctggcgcg 15095714



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 154      ggcaagggcggcggctgcgt 173
                ||||||||||||||||||||
Sbjct: 21301951 ggcaagggcggcggctgcgt 21301932



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 219    gccctcgtcgtcgtccgccaccgc 242
              ||||||||||||||||||| ||||
Sbjct: 265569 gccctcgtcgtcgtccgccgccgc 265592
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                            
Query: 144      gccggagatgggcaagggcggcggctgcgtccccagcaagaagcgccagccgccagccac 203
                ||||| |||| | ||||||||| |||||||||||| |||||||||  ||||||| |||| 
Sbjct: 24078914 gccggtgatgaggaagggcggcagctgcgtccccaacaagaagcggtagccgccggccaa 24078973

                       
Query: 204      caccgtc 210
                |||||||
Sbjct: 24078974 caccgtc 24078980



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 211      gccaccgcgccctcgtcgtcgtccgcca 238
                |||||| |||||||| ||||||||||||
Sbjct: 19753434 gccaccccgccctcggcgtcgtccgcca 19753461
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>dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0481F05
          Length = 139739

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                          
Query: 144    gccggagatgggcaagggcggcggctgcgtccccagcaagaagcgccagccgccagccac 203
              ||||| |||| | ||||||||| |||||||||||| |||||||||  ||||||| |||| 
Sbjct: 106314 gccggtgatgaggaagggcggcagctgcgtccccaacaagaagcggtagccgccggccaa 106373

                     
Query: 204    caccgtc 210
              |||||||
Sbjct: 106374 caccgtc 106380
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>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0028A08
          Length = 150818

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                         
Query: 144   gccggagatgggcaagggcggcggctgcgtccccagcaagaagcgccagccgccagccac 203
             ||||| |||| | ||||||||| |||||||||||| |||||||||  ||||||| |||| 
Sbjct: 32400 gccggtgatgaggaagggcggcagctgcgtccccaacaagaagcggtagccgccggccaa 32459

                    
Query: 204   caccgtc 210
             |||||||
Sbjct: 32460 caccgtc 32466
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>ref|XM_469744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 759

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 317 tcgtgttctactccatgtacgggcacgt 344
           ||||||||||||||||||||||||||||
Sbjct: 143 tcgtgttctactccatgtacgggcacgt 170



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 151 atgggcaagggcggcggctgcgtccccagcaaga 184
           ||||||||||||||||||||| |||| |||||||
Sbjct: 1   atgggcaagggcggcggctgcatcccgagcaaga 34
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>gb|AY644646.1| Oryza sativa (indica cultivar-group) putative quinone reductase
           (QR) mRNA, complete cds
          Length = 963

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 317 tcgtgttctactccatgtacgggcacgt 344
           ||||||||||||||||||||||||||||
Sbjct: 148 tcgtgttctactccatgtacgggcacgt 175



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 150 gatgggcaagggcggcggctgcgtccccagcaaga 184
           |||||||||||||||||||||| |||| |||||||
Sbjct: 5   gatgggcaagggcggcggctgcatcccgagcaaga 39
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 317      tcgtgttctactccatgtacgggcacgt 344
                ||||||||||||||||||||||||||||
Sbjct: 30516100 tcgtgttctactccatgtacgggcacgt 30516073



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 150      gatgggcaagggcggcggctgcgtccccagcaaga 184
                |||||||||||||||||||||| |||| |||||||
Sbjct: 30516243 gatgggcaagggcggcggctgcatcccgagcaaga 30516209
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>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete
             sequence
          Length = 139872

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 317   tcgtgttctactccatgtacgggcacgt 344
             ||||||||||||||||||||||||||||
Sbjct: 47673 tcgtgttctactccatgtacgggcacgt 47646



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 150   gatgggcaagggcggcggctgcgtccccagcaaga 184
             |||||||||||||||||||||| |||| |||||||
Sbjct: 47816 gatgggcaagggcggcggctgcatcccgagcaaga 47782
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 317      tcgtgttctactccatgtacgggcacgt 344
                ||||||||||||||||||||||||||||
Sbjct: 30607522 tcgtgttctactccatgtacgggcacgt 30607495



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 150      gatgggcaagggcggcggctgcgtccccagcaaga 184
                |||||||||||||||||||||| |||| |||||||
Sbjct: 30607665 gatgggcaagggcggcggctgcatcccgagcaaga 30607631
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>dbj|AK110695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-A09, full
           insert sequence
          Length = 952

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 317 tcgtgttctactccatgtacgggcacgt 344
           ||||||||||||||||||||||||||||
Sbjct: 137 tcgtgttctactccatgtacgggcacgt 164



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 157 aagggcggcggctgcgtccccagcaaga 184
           ||||||||||||||| |||| |||||||
Sbjct: 1   aagggcggcggctgcatcccgagcaaga 28
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>ref|XM_652809.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0297.2), mRNA
          Length = 615

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 315 catcgtgttctactccatgtacgggcacgt 344
           |||||| ||||||||||||||||| |||||
Sbjct: 18  catcgtcttctactccatgtacggccacgt 47
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>gb|AF294228.1| Xanthomonas campestris pv. campestris phi-Lf phage-like gene sequence
          Length = 4445

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 197  cagccaccaccgtcgccaccgc 218
            ||||||||||||||||||||||
Sbjct: 3230 cagccaccaccgtcgccaccgc 3251
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 203      ccaccgtcgccaccgcgccctcgtcg 228
                |||||| |||||||||||||||||||
Sbjct: 27458972 ccaccgccgccaccgcgccctcgtcg 27458997



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 187      cgccagccgccagccaccaccgtcgccacc 216
                ||||||||||||||| |||||| |||||||
Sbjct: 14503378 cgccagccgccagccgccaccgccgccacc 14503407



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    tcgtcgtcgtccgccaccgc 242
              ||||||||||||||||||||
Sbjct: 626016 tcgtcgtcgtccgccaccgc 626035
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>emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb0011N16 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 55237

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 203   ccaccgtcgccaccgcgccctcgtcg 228
             |||||| |||||||||||||||||||
Sbjct: 22846 ccaccgccgccaccgcgccctcgtcg 22821
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>dbj|AK110532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-A05, full
           insert sequence
          Length = 1500

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ccaccgtcgccaccgcgccctcgtcg 228
           |||||| |||||||||||||||||||
Sbjct: 341 ccaccgccgccaccgcgccctcgtcg 366
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 203      ccaccgtcgccaccgcgccctcgtcg 228
                |||||| |||||||||||||||||||
Sbjct: 27384572 ccaccgccgccaccgcgccctcgtcg 27384597



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 187      cgccagccgccagccaccaccgtcgccacc 216
                ||||||||||||||| |||||| |||||||
Sbjct: 14457662 cgccagccgccagccgccaccgccgccacc 14457691



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    tcgtcgtcgtccgccaccgc 242
              ||||||||||||||||||||
Sbjct: 626016 tcgtcgtcgtccgccaccgc 626035
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>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 158261

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 187    cgccagccgccagccaccaccgtcgccacc 216
              ||||||||||||||| |||||| |||||||
Sbjct: 157915 cgccagccgccagccgccaccgccgccacc 157886
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>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109222

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 203   ccaccgtcgccaccgcgccctcgtcg 228
             |||||| |||||||||||||||||||
Sbjct: 34886 ccaccgccgccaccgcgccctcgtcg 34911
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>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 118101

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 187   cgccagccgccagccaccaccgtcgccacc 216
             ||||||||||||||| |||||| |||||||
Sbjct: 13914 cgccagccgccagccgccaccgccgccacc 13885
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041J17, complete sequence
          Length = 148829

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 215   ccgcgccctcgtcgtcgtccgccaccgcg 243
             |||||| |||||||||||| |||||||||
Sbjct: 86031 ccgcgcgctcgtcgtcgtcggccaccgcg 86059
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 325    tactccatgtacgggcacgtggaagcgctggcg 357
              |||||||  ||||||||||||||||| ||||||
Sbjct: 516779 tactccacctacgggcacgtggaagccctggcg 516811
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>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 342    cgtggaagcgctggcgcgtca 362
              |||||||||||||||||||||
Sbjct: 117063 cgtggaagcgctggcgcgtca 117043
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 215      ccgcgccctcgtcgtcgtccgccaccgcg 243
                |||||| |||||||||||| |||||||||
Sbjct: 18982833 ccgcgcgctcgtcgtcgtcggccaccgcg 18982861
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 203     ccaccgtcgccaccgcgccctcgtcgtcg 231
               |||||| |||||||||| |||||||||||
Sbjct: 5042720 ccaccggcgccaccgcgacctcgtcgtcg 5042692
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 218      cgccctcgtcgtcgtccgccaccgc 242
                |||| ||||||||||||||||||||
Sbjct: 18840574 cgccatcgtcgtcgtccgccaccgc 18840550



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 323      tctactccatgtacgggcac 342
                ||||||||||||||||||||
Sbjct: 31848982 tctactccatgtacgggcac 31849001



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 223      tcgtcgtcgtccgccaccgc 242
                ||||||||||||||||||||
Sbjct: 13894964 tcgtcgtcgtccgccaccgc 13894945
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>dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1074C08
          Length = 165701

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 218   cgccctcgtcgtcgtccgccaccgc 242
             |||| ||||||||||||||||||||
Sbjct: 12964 cgccatcgtcgtcgtccgccaccgc 12940
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>dbj|AP004641.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1147B04
          Length = 142956

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 218   cgccctcgtcgtcgtccgccaccgc 242
             |||| ||||||||||||||||||||
Sbjct: 47585 cgccatcgtcgtcgtccgccaccgc 47561
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    caccgcgccctcgtcgtcgtc 233
              |||||||||||||||||||||
Sbjct: 518594 caccgcgccctcgtcgtcgtc 518574
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>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0049I08
          Length = 144379

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 203   ccaccgtcgccaccgcgccctcgtcgtcg 231
             |||||| |||||||||| |||||||||||
Sbjct: 84409 ccaccggcgccaccgcgacctcgtcgtcg 84381
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    tccccagcaagaagcgccagc 193
              |||||||||||||||||||||
Sbjct: 908944 tccccagcaagaagcgccagc 908924
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 215      ccgcgccctcgtcgtcgtccgccaccgcg 243
                |||||| |||||||||||| |||||||||
Sbjct: 19141482 ccgcgcgctcgtcgtcgtcggccaccgcg 19141510
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>ref|XM_482385.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2547

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 211 gccaccgcgccctcgtcgtcgtccgcca 238
           |||||| |||||||| ||||||||||||
Sbjct: 128 gccaccccgccctcggcgtcgtccgcca 101
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>ref|NM_194505.1| Oryza sativa (japonica cultivar-group) putative homeobox protein
           HAT22 (OSJNBa0096E22.15), mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 219 gccctcgtcgtcgtccgccaccgc 242
           ||||||||||||||||||| ||||
Sbjct: 267 gccctcgtcgtcgtccgccgccgc 244
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>ref|NM_184014.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 627

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 tcgtcgtcgtccgccaccgc 242
           ||||||||||||||||||||
Sbjct: 521 tcgtcgtcgtccgccaccgc 502
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>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0071K19, complete sequence
          Length = 174752

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 219   gccctcgtcgtcgtccgccaccgc 242
             ||||||||||||||||||| ||||
Sbjct: 30630 gccctcgtcgtcgtccgccgccgc 30653
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>ref|XM_366979.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG03055.4) partial mRNA
          Length = 2166

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 210 cgccaccgcgccctcgtcgtcgtc 233
           ||||||| ||||||||||||||||
Sbjct: 489 cgccacctcgccctcgtcgtcgtc 512
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>gb|AY219173.1| Zea mays submergence induced protein SI397 mRNA, complete cds
          Length = 1564

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 200 ccaccaccgtcgccaccgcg 219
           ||||||||||||||||||||
Sbjct: 935 ccaccaccgtcgccaccgcg 916
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 153     gggcaagggcggcggctgcg 172
               ||||||||||||||||||||
Sbjct: 1690733 gggcaagggcggcggctgcg 1690714
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     ccaccgtcgccaccgcgccc 222
               ||||||||||||||||||||
Sbjct: 2591268 ccaccgtcgccaccgcgccc 2591287
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 219    gccctcgtcgtcgtccgccaccgc 242
              ||||||||||||||||||| ||||
Sbjct: 265572 gccctcgtcgtcgtccgccgccgc 265595
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 276     cgcacccaccggggagtcgagcca 299
               ||||||||||||||||| ||||||
Sbjct: 2313636 cgcacccaccggggagttgagcca 2313613
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>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ccaccaccgtcgccaccgcg 219
             ||||||||||||||||||||
Sbjct: 13856 ccaccaccgtcgccaccgcg 13837
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>emb|AJ243504.1|LPE243504 Lolium perenne mRNA for pollen allergen (5C gene)
          Length = 1215

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 199 gccaccaccgtcgccaccgcgccc 222
           ||||||||||||||| ||||||||
Sbjct: 703 gccaccaccgtcgccgccgcgccc 726
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>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
             sequence
          Length = 135510

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   ggcaagggcggcggctgcgt 173
             ||||||||||||||||||||
Sbjct: 43672 ggcaagggcggcggctgcgt 43691
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>gb|AC099400.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096E22,
              complete sequence
          Length = 133846

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 219    gccctcgtcgtcgtccgccaccgc 242
              ||||||||||||||||||| ||||
Sbjct: 115235 gccctcgtcgtcgtccgccgccgc 115258
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>dbj|AB193030.1| Corynebacterium glutamicum DNA, strain specific island 3, strain: R
          Length = 56248

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  gggcaagggcggcggctgcg 172
            ||||||||||||||||||||
Sbjct: 9952 gggcaagggcggcggctgcg 9971
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>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131G08
          Length = 158241

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   tctactccatgtacgggcac 342
             ||||||||||||||||||||
Sbjct: 35060 tctactccatgtacgggcac 35079
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>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1051E10
          Length = 207782

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   tcgtcgtcgtccgccaccgc 242
             ||||||||||||||||||||
Sbjct: 55266 tcgtcgtcgtccgccaccgc 55247
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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0440D10
          Length = 144340

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    tcgtcgtcgtccgccaccgc 242
              ||||||||||||||||||||
Sbjct: 132367 tcgtcgtcgtccgccaccgc 132348
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0007M04
          Length = 176293

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 211   gccaccgcgccctcgtcgtcgtccgcca 238
             |||||| |||||||| ||||||||||||
Sbjct: 82385 gccaccccgccctcggcgtcgtccgcca 82412
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>dbj|AK108540.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-D01, full
           insert sequence
          Length = 1589

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 tcgtcgtcgtccgccaccgc 242
           ||||||||||||||||||||
Sbjct: 738 tcgtcgtcgtccgccaccgc 757
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>dbj|AK106924.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B08, full
            insert sequence
          Length = 1682

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 154  ggcaagggcggcggctgcgt 173
            ||||||||||||||||||||
Sbjct: 1091 ggcaagggcggcggctgcgt 1110
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>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 115859

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   tcgtcgtcgtccgccaccgc 242
             ||||||||||||||||||||
Sbjct: 22827 tcgtcgtcgtccgccaccgc 22808
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>gb|M38342.1|PPTKBG31 Poa pratensis pollen allergen (KBG 31) mRNA, complete cds
          Length = 1322

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 ccaccgtcgccaccgcgccc 222
           ||||||||||||||||||||
Sbjct: 941 ccaccgtcgccaccgcgccc 960


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,609,453
Number of Sequences: 3902068
Number of extensions: 2609453
Number of successful extensions: 57694
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56277
Number of HSP's gapped (non-prelim): 1417
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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