ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast73c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6 32 0.90
2IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (E... 32 1.2
3NEC2_RAT (P28841) Neuroendocrine convertase 2 precursor (EC 3.4.... 31 1.5
4NEC2_MOUSE (P21661) Neuroendocrine convertase 2 precursor (EC 3.... 31 2.0
5BGAL_ASPNG (P29853) Beta-galactosidase precursor (EC 3.2.1.23) (... 30 4.4
6IF3A_SCHPO (O74760) Probable eukaryotic translation initiation f... 30 4.4
7MAGA3_HUMAN (P43357) Melanoma-associated antigen 3 (MAGE-3 antig... 30 4.4
8Y343_METJA (Q57789) Hypothetical protein MJ0343 29 7.6

>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6|
          Length = 704

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -3

Query: 208 DERVGCGGQQAPGEAERRRDVALERERQHE 119
           ++RVG G QQ PGE E RR+ + E  R+ E
Sbjct: 356 EDRVGDGPQQEPGEDEERRERSPEGPREEE 385



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>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)|
           (IAA-Glu synthetase) ((Uridine
           5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl
           transferase)
          Length = 471

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 33/115 (28%), Positives = 43/115 (37%)
 Frame = +2

Query: 113 HFLVLTFPLQGHIXXXXXXXXXXXXXXXXXXVTFSTTEAAHRRMFPAEPDGGVDDCRLEL 292
           H LV+ FP QGH+                   T  TT    R          VD     +
Sbjct: 4   HVLVVPFPGQGHM--NPMVQFAKRLASKGVATTLVTTRFIQR-------TADVDAHPAMV 54

Query: 293 LPFSDGTDAGYDRSSTDPAAFTDYMASFQAAGARSVGELVDALAARGRPVTRVVY 457
              SDG D G   S+   A   +Y+    AA + S+  LV+A A+     T VVY
Sbjct: 55  EAISDGHDEGGFASA---AGVAEYLEKQAAAASASLASLVEARASSADAFTCVVY 106



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>NEC2_RAT (P28841) Neuroendocrine convertase 2 precursor (EC 3.4.21.94) (NEC|
           2) (PC2) (Prohormone convertase 2) (Proprotein
           convertase 2) (KEX2-like endoprotease 2)
          Length = 637

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +2

Query: 260 DGGVDDCRLELLPFSDGTDAGYDRSSTDPAAFTDYMAS-FQAAGARSVGELVDALAARGR 436
           D G+D    +L  ++  +DA YD SS DP  +  Y    F + G R  GE V A A+   
Sbjct: 166 DDGIDYLHPDLA-YNYNSDASYDFSSNDPYPYPRYTDDWFNSHGTRCAGE-VSAAASNNI 223

Query: 437 PVTRVVYTMLLRGPR 481
               V Y   + G R
Sbjct: 224 CGVGVAYNSKVAGIR 238



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>NEC2_MOUSE (P21661) Neuroendocrine convertase 2 precursor (EC 3.4.21.94) (NEC|
           2) (PC2) (Prohormone convertase 2) (Proprotein
           convertase 2) (KEX2-like endoprotease 2)
          Length = 637

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +2

Query: 260 DGGVDDCRLELLPFSDGTDAGYDRSSTDPAAFTDYMAS-FQAAGARSVGELVDALAARGR 436
           D G+D    +L  ++   DA YD SS DP  +  Y    F + G R  GE V A A+   
Sbjct: 166 DDGIDYLHPDLA-YNYNADASYDFSSNDPYPYPRYTDDWFNSHGTRCAGE-VSAAASNNI 223

Query: 437 PVTRVVYTMLLRGPR 481
               V Y   + G R
Sbjct: 224 CGVGVAYNSKVAGIR 238



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>BGAL_ASPNG (P29853) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
           (Tilactase) (Lactase-N)
          Length = 1006

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/74 (24%), Positives = 28/74 (37%)
 Frame = -1

Query: 252 AGNMRRCAASVVENVTXXXXXXXXXXXXXXXXXAMWPWSGNVSTRKCRCGDMLVSLS*LG 73
           AG     A S   NVT                  +  W  + + R  + GD+ + L    
Sbjct: 509 AGEHHELAISTKSNVTVIEGSESGISSKQTSSSVVVGWDVSTTRRIIQVGDLKILLLDRN 568

Query: 72  DSRSFRVPQLCSDG 31
            + ++ VPQL +DG
Sbjct: 569 SAYNYWVPQLATDG 582



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>IF3A_SCHPO (O74760) Probable eukaryotic translation initiation factor 3 110|
           kDa subunit (eIF3 p110) (Translation initiation factor
           eIF3, p110 subunit) (eIF3a)
          Length = 932

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 211 RDERVGCGGQQAPGEAERRRDVALERERQHEEVPLRRH 98
           R E +    + A  +AE  R++  ERE+Q +EV  R+H
Sbjct: 690 RREAIPLWEEDAKQQAEHDREIFYEREKQRKEVQERKH 727



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>MAGA3_HUMAN (P43357) Melanoma-associated antigen 3 (MAGE-3 antigen) (Antigen|
           MZ2-D)
          Length = 314

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
 Frame = +2

Query: 206 VTFSTTEAAHRRMFPAEPDGGVDDCRLELLP-FSDGTDAGYDRSSTDPAAFTDYMASFQA 382
           VT     AA     P  P G          P +S   +   ++    P+ F D  + FQA
Sbjct: 48  VTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQA 107

Query: 383 AGARSVGELVDALAARGR---PVTR 448
           A +R V ELV  L  + R   PVT+
Sbjct: 108 ALSRKVAELVHFLLLKYRAREPVTK 132



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>Y343_METJA (Q57789) Hypothetical protein MJ0343|
          Length = 849

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 341 DPAAFTDYMASFQAAGARSVGELVDAL 421
           DP  F   +   QAAGA+ VG+L +A+
Sbjct: 305 DPEKFASILIQAQAAGAQDVGQLAEAI 331


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.132    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,544,949
Number of Sequences: 219361
Number of extensions: 648082
Number of successful extensions: 2325
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2325
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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