ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast73c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 226 5e-56
2dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic D... 226 5e-56
3dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic D... 226 5e-56
4dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 5e-56
5ref|XM_464540.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
7dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
8dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
9dbj|AK120020.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
10dbj|AK060513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
11gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 48 0.027
12gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 48 0.027
13gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
14gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 46 0.11
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
16dbj|AK101484.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
17gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 46 0.11
18gb|AC079243.7| Mus musculus strain C57BL6/J chromosome 6 clone R... 44 0.42
19gb|AC079183.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 44 0.42
20ref|NM_195554.1| Oryza sativa (japonica cultivar-group) hypothet... 42 1.7
21gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 1.7
22gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
23gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
24gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.7
25gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genom... 42 1.7
26gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.7
27gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.7
28gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.7
29emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.7
30emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.7
31gb|AC113339.1| Genomic sequence for Oryza sativa (japonica culti... 42 1.7
32gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.7
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
36dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.7
37ref|XM_216152.3| PREDICTED: Rattus norvegicus glycyl-tRNA synthe... 42 1.7
38ref|XM_575487.1| PREDICTED: Rattus norvegicus similar to Glycyl-... 42 1.7
39dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.7
40dbj|AK066712.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
41gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.7
42gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.7
43gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
44gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
45gb|U66061.1| Human germline T-cell receptor beta chain TCRBV17S1... 40 6.6
46gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 6.6
47gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.6
48ref|XM_608246.2| PREDICTED: Bos taurus similar to CG5020-PA, iso... 40 6.6
49gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.6
50gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 6.6
51ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) ... 40 6.6
52gb|AY214929.1| Thiocapsa roseopersicina N-acetyl-anhydromuramyl-... 40 6.6
53gb|AY386264.1| Orf virus strain OV-SA00, complete genome 40 6.6
54gb|AY386263.1| Orf virus strain OV-IA82, complete genome 40 6.6
55gb|BT011189.1| Drosophila melanogaster LP11192 full insert cDNA 40 6.6
56emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.6
57gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.6
58gb|DQ357071.1| Saccharothrix espanaensis caffeic acid biosynthet... 40 6.6
59ref|NM_176176.1| Drosophila melanogaster Kinesin-73 CG8183-RB, t... 40 6.6
60ref|NM_135357.3| Drosophila melanogaster Kinesin-73 CG8183-RA, t... 40 6.6
61gb|AC104597.3| Homo sapiens BAC clone RP11-114L10 from 7, comple... 40 6.6
62gb|AC099395.2| Homo sapiens BAC clone CTD-2152B9 from 7, complet... 40 6.6
63gb|DQ184476.1| Orf virus strain NZ2, complete genome 40 6.6
64gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.6
65dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
66dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.6
67dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
68emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 6.6
69emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.6
70gb|AC008369.1|AC008369 Drosophila melanogaster, chromosome 2R, r... 40 6.6
71gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40... 40 6.6
72dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complet... 40 6.6
73gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.6
74emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete ... 40 6.6
75gb|U81788.1|DMU81788 Drosophila melanogaster kinesin-73 mRNA, co... 40 6.6
76dbj|AB020214.1| Oryctolagus cuniculus c-fos mRNA, partial sequence 40 6.6 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  226 bits (114), Expect = 5e-56
 Identities = 182/204 (89%), Gaps = 3/204 (1%)
 Strand = Plus / Minus

                                                                            
Query: 112      gcacttcctcgtgctgacgttcccgctccagggccacatcgcgccggcgctccgcctcgc 171
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22951331 gcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcctcgc 22951272

                                                                            
Query: 172      ccggcgcctgctggccgccgcacccgacgcgctcgtcacgttctccaccaccgaggcagc 231
                | |||||||||| |||||||| ||||||||||||||||| ||||||||| |||  || ||
Sbjct: 22951271 caggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccgccgccgc 22951212

                                                                            
Query: 232      gcaccgccgcatgttcccggcggagccggacggcggcgtcgacgactgccgcctcgagct 291
                ||||||||||||||||   || |||  ||| ||||||| || |||| || | ||||||||
Sbjct: 22951211 gcaccgccgcatgttc---gccgagggggagggcggcgacggcgacggcaggctcgagct 22951155

                                        
Query: 292      cctcccgttctcagacggcaccga 315
                |||||||||||| |||||||||||
Sbjct: 22951154 cctcccgttctccgacggcaccga 22951131



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 104/125 (83%), Gaps = 1/125 (0%)
 Strand = Plus / Minus

                                                                            
Query: 362      tacatggcgtccttccaggccgcaggcgcgcgcagcgtcggggagctcgtggacgcgctc 421
                ||||||||||| ||||| ||| | |||  |||||||||||||||| | || |||||||||
Sbjct: 22951087 tacatggcgtcgttccacgcctcgggccggcgcagcgtcggggagatggtcgacgcgctc 22951028

                                                                            
Query: 422      gccgcgcgcggccgccccgtgacccgcgtcgtgtacacgatgctcct-ccgtgggccgcg 480
                || ||||| || ||||||||| |  ||||||| |||||| | ||||| |||||||| || 
Sbjct: 22951027 gcggcgcgggggcgccccgtgtcgagcgtcgtctacacgctcctcctgccgtgggcggcc 22950968

                     
Query: 481      gacgt 485
                |||||
Sbjct: 22950967 gacgt 22950963



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                            
Query: 140      cagggccacatcgcgccggcgctccgcctcgcccggcgcctgctggccgccgcacccgac 199
                ||||||||||||   ||||||| ||||||||||  ||||||| ||||  | || || | |
Sbjct: 22926712 cagggccacatcaacccggcgcgccgcctcgccgcgcgcctgatggcgtcggcgccggcc 22926771

                                                                   
Query: 200      gcgctcgtcacgttctccaccaccgaggcagcgcaccgccgcatgttcccg 250
                |||| |||||| ||||||||| |||   | |||||||||| ||||||||||
Sbjct: 22926772 gcgcgcgtcaccttctccaccgccgtctccgcgcaccgcctcatgttcccg 22926822
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>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0502H06
          Length = 165630

 Score =  226 bits (114), Expect = 5e-56
 Identities = 182/204 (89%), Gaps = 3/204 (1%)
 Strand = Plus / Minus

                                                                          
Query: 112    gcacttcctcgtgctgacgttcccgctccagggccacatcgcgccggcgctccgcctcgc 171
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126153 gcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcctcgc 126094

                                                                          
Query: 172    ccggcgcctgctggccgccgcacccgacgcgctcgtcacgttctccaccaccgaggcagc 231
              | |||||||||| |||||||| ||||||||||||||||| ||||||||| |||  || ||
Sbjct: 126093 caggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccgccgccgc 126034

                                                                          
Query: 232    gcaccgccgcatgttcccggcggagccggacggcggcgtcgacgactgccgcctcgagct 291
              ||||||||||||||||   || |||  ||| ||||||| || |||| || | ||||||||
Sbjct: 126033 gcaccgccgcatgttc---gccgagggggagggcggcgacggcgacggcaggctcgagct 125977

                                      
Query: 292    cctcccgttctcagacggcaccga 315
              |||||||||||| |||||||||||
Sbjct: 125976 cctcccgttctccgacggcaccga 125953



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 104/125 (83%), Gaps = 1/125 (0%)
 Strand = Plus / Minus

                                                                          
Query: 362    tacatggcgtccttccaggccgcaggcgcgcgcagcgtcggggagctcgtggacgcgctc 421
              ||||||||||| ||||| ||| | |||  |||||||||||||||| | || |||||||||
Sbjct: 125909 tacatggcgtcgttccacgcctcgggccggcgcagcgtcggggagatggtcgacgcgctc 125850

                                                                          
Query: 422    gccgcgcgcggccgccccgtgacccgcgtcgtgtacacgatgctcct-ccgtgggccgcg 480
              || ||||| || ||||||||| |  ||||||| |||||| | ||||| |||||||| || 
Sbjct: 125849 gcggcgcgggggcgccccgtgtcgagcgtcgtctacacgctcctcctgccgtgggcggcc 125790

                   
Query: 481    gacgt 485
              |||||
Sbjct: 125789 gacgt 125785



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                          
Query: 140    cagggccacatcgcgccggcgctccgcctcgcccggcgcctgctggccgccgcacccgac 199
              ||||||||||||   ||||||| ||||||||||  ||||||| ||||  | || || | |
Sbjct: 101534 cagggccacatcaacccggcgcgccgcctcgccgcgcgcctgatggcgtcggcgccggcc 101593

                                                                 
Query: 200    gcgctcgtcacgttctccaccaccgaggcagcgcaccgccgcatgttcccg 250
              |||| |||||| ||||||||| |||   | |||||||||| ||||||||||
Sbjct: 101594 gcgcgcgtcaccttctccaccgccgtctccgcgcaccgcctcatgttcccg 101644
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>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0652A05
          Length = 150455

 Score =  226 bits (114), Expect = 5e-56
 Identities = 182/204 (89%), Gaps = 3/204 (1%)
 Strand = Plus / Minus

                                                                         
Query: 112   gcacttcctcgtgctgacgttcccgctccagggccacatcgcgccggcgctccgcctcgc 171
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17816 gcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcctcgc 17757

                                                                         
Query: 172   ccggcgcctgctggccgccgcacccgacgcgctcgtcacgttctccaccaccgaggcagc 231
             | |||||||||| |||||||| ||||||||||||||||| ||||||||| |||  || ||
Sbjct: 17756 caggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccgccgccgc 17697

                                                                         
Query: 232   gcaccgccgcatgttcccggcggagccggacggcggcgtcgacgactgccgcctcgagct 291
             ||||||||||||||||   || |||  ||| ||||||| || |||| || | ||||||||
Sbjct: 17696 gcaccgccgcatgttc---gccgagggggagggcggcgacggcgacggcaggctcgagct 17640

                                     
Query: 292   cctcccgttctcagacggcaccga 315
             |||||||||||| |||||||||||
Sbjct: 17639 cctcccgttctccgacggcaccga 17616



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 104/125 (83%), Gaps = 1/125 (0%)
 Strand = Plus / Minus

                                                                         
Query: 362   tacatggcgtccttccaggccgcaggcgcgcgcagcgtcggggagctcgtggacgcgctc 421
             ||||||||||| ||||| ||| | |||  |||||||||||||||| | || |||||||||
Sbjct: 17572 tacatggcgtcgttccacgcctcgggccggcgcagcgtcggggagatggtcgacgcgctc 17513

                                                                         
Query: 422   gccgcgcgcggccgccccgtgacccgcgtcgtgtacacgatgctcct-ccgtgggccgcg 480
             || ||||| || ||||||||| |  ||||||| |||||| | ||||| |||||||| || 
Sbjct: 17512 gcggcgcgggggcgccccgtgtcgagcgtcgtctacacgctcctcctgccgtgggcggcc 17453

                  
Query: 481   gacgt 485
             |||||
Sbjct: 17452 gacgt 17448
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>dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G10, full
           insert sequence
          Length = 1663

 Score =  226 bits (114), Expect = 5e-56
 Identities = 182/204 (89%), Gaps = 3/204 (1%)
 Strand = Plus / Plus

                                                                       
Query: 112 gcacttcctcgtgctgacgttcccgctccagggccacatcgcgccggcgctccgcctcgc 171
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gcacttcctcgtgctcacgttcccgctccagggccacatcgcgccggcgctccgcctcgc 166

                                                                       
Query: 172 ccggcgcctgctggccgccgcacccgacgcgctcgtcacgttctccaccaccgaggcagc 231
           | |||||||||| |||||||| ||||||||||||||||| ||||||||| |||  || ||
Sbjct: 167 caggcgcctgctcgccgccgcccccgacgcgctcgtcaccttctccaccgccgccgccgc 226

                                                                       
Query: 232 gcaccgccgcatgttcccggcggagccggacggcggcgtcgacgactgccgcctcgagct 291
           ||||||||||||||||   || |||  ||| ||||||| || |||| || | ||||||||
Sbjct: 227 gcaccgccgcatgttc---gccgagggggagggcggcgacggcgacggcaggctcgagct 283

                                   
Query: 292 cctcccgttctcagacggcaccga 315
           |||||||||||| |||||||||||
Sbjct: 284 cctcccgttctccgacggcaccga 307



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 104/125 (83%), Gaps = 1/125 (0%)
 Strand = Plus / Plus

                                                                       
Query: 362 tacatggcgtccttccaggccgcaggcgcgcgcagcgtcggggagctcgtggacgcgctc 421
           ||||||||||| ||||| ||| | |||  |||||||||||||||| | || |||||||||
Sbjct: 351 tacatggcgtcgttccacgcctcgggccggcgcagcgtcggggagatggtcgacgcgctc 410

                                                                       
Query: 422 gccgcgcgcggccgccccgtgacccgcgtcgtgtacacgatgctcct-ccgtgggccgcg 480
           || ||||| || ||||||||| |  ||||||| |||||| | ||||| |||||||| || 
Sbjct: 411 gcggcgcgggggcgccccgtgtcgagcgtcgtctacacgctcctcctgccgtgggcggcc 470

                
Query: 481 gacgt 485
           |||||
Sbjct: 471 gacgt 475
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>ref|XM_464540.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 419 ctcgccgcgcgcggccgccccgtgacccgcgtcgtgtac 457
           |||||||||||||||||||||| |||  |||||||||||
Sbjct: 337 ctcgccgcgcgcggccgccccgcgacgtgcgtcgtgtac 375
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                      
Query: 419     ctcgccgcgcgcggccgccccgtgacccgcgtcgtgtac 457
               |||||||||||||||||||||| |||  |||||||||||
Sbjct: 5776285 ctcgccgcgcgcggccgccccgcgacgtgcgtcgtgtac 5776323



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 414      acgcgctcgccgcgcgcggccgcc 437
                |||||| |||||||||||||||||
Sbjct: 30946844 acgcgcacgccgcgcgcggccgcc 30946821
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>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0544H11
          Length = 178376

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 419  ctcgccgcgcgcggccgccccgtgacccgcgtcgtgtac 457
            |||||||||||||||||||||| |||  |||||||||||
Sbjct: 6087 ctcgccgcgcgcggccgccccgcgacgtgcgtcgtgtac 6125
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>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1135_F06
          Length = 102230

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 419   ctcgccgcgcgcggccgccccgtgacccgcgtcgtgtac 457
             |||||||||||||||||||||| |||  |||||||||||
Sbjct: 65799 ctcgccgcgcgcggccgccccgcgacgtgcgtcgtgtac 65837
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>dbj|AK120020.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C02, full
            insert sequence
          Length = 1581

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 419  ctcgccgcgcgcggccgccccgtgacccgcgtcgtgtac 457
            |||||||||||||||||||||| |||  |||||||||||
Sbjct: 1020 ctcgccgcgcgcggccgccccgcgacgtgcgtcgtgtac 982
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>dbj|AK060513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F01, full
           insert sequence
          Length = 1734

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                       
Query: 140 cagggccacatcgcgccggcgctccgcctcgcccggcgcctgctggccgccgcacccgac 199
           ||||||||||||   ||||||| ||||||||||  ||||||| ||||  | || || | |
Sbjct: 94  cagggccacatcaacccggcgcgccgcctcgccgcgcgcctgatggcgtcggcgccggcc 153

                                                              
Query: 200 gcgctcgtcacgttctccaccaccgaggcagcgcaccgccgcatgttcccg 250
           |||| |||||| ||||||||| |||   | |||||||||| ||||||||||
Sbjct: 154 gcgcgcgtcaccttctccaccgccgtctccgcgcaccgcctcatgttcccg 204
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 168     tcgcccggcgcctgctggccgccg 191
               ||||||||||||||||||||||||
Sbjct: 6127520 tcgcccggcgcctgctggccgccg 6127497
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 413     gacgcgctcgccgcgcgcggccgc 436
               ||||||||||||||||||||||||
Sbjct: 2407631 gacgcgctcgccgcgcgcggccgc 2407608



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    gacgcgctcgccgcgcgcgg 432
              ||||||||||||||||||||
Sbjct: 955657 gacgcgctcgccgcgcgcgg 955638
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>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
             complete sequence
          Length = 121466

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 415   cgcgctcgccgcgcgcggccgcc 437
             |||||||||||||||||||||||
Sbjct: 99117 cgcgctcgccgcgcgcggccgcc 99139
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 158     gcgctccgcctcgcccggcgcctgctggccg 188
               ||||| ||||||||||||||||||| |||||
Sbjct: 1990785 gcgctgcgcctcgcccggcgcctgccggccg 1990815
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 415      cgcgctcgccgcgcgcggccgcc 437
                |||||||||||||||||||||||
Sbjct: 24212879 cgcgctcgccgcgcgcggccgcc 24212901
to top
>dbj|AK101484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041G24, full
           insert sequence
          Length = 2029

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 415 cgcgctcgccgcgcgcggccgcc 437
           |||||||||||||||||||||||
Sbjct: 162 cgcgctcgccgcgcgcggccgcc 184
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 135     cgctccagggccacatcgcgccggcgc 161
               ||||||||| |||||||||||||||||
Sbjct: 1203897 cgctccaggaccacatcgcgccggcgc 1203871



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 169     cgcccggcgcctgctggccg 188
               ||||||||||||||||||||
Sbjct: 1466452 cgcccggcgcctgctggccg 1466471
to top
>gb|AC079243.7| Mus musculus strain C57BL6/J chromosome 6 clone RP23-64M7, complete
            sequence
          Length = 205508

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 376  ccaggccgcaggcgcgcgcagc 397
            ||||||||||||||||||||||
Sbjct: 1663 ccaggccgcaggcgcgcgcagc 1642
to top
>gb|AC079183.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-258N2, complete
              sequence
          Length = 170233

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 376    ccaggccgcaggcgcgcgcagc 397
              ||||||||||||||||||||||
Sbjct: 169624 ccaggccgcaggcgcgcgcagc 169603
to top
>ref|NM_195554.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0047B19.17), mRNA
          Length = 801

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 277 ctgccgcctcgagctcctccc 297
           |||||||||||||||||||||
Sbjct: 393 ctgccgcctcgagctcctccc 413
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 413    gacgcgctcgccgcgcgcggc 433
              |||||||||||||||||||||
Sbjct: 948878 gacgcgctcgccgcgcgcggc 948858



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    gcagcgcaccgccgcatgtt 246
              ||||||||||||||||||||
Sbjct: 879930 gcagcgcaccgccgcatgtt 879911



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    ccggcgcctgctggccgccg 191
              ||||||||||||||||||||
Sbjct: 827292 ccggcgcctgctggccgccg 827273
to top
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 417   cgctcgccgcgcgcggccgcc 437
             |||||||||||||||||||||
Sbjct: 93637 cgctcgccgcgcgcggccgcc 93617



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   gctcgccgcgcgcggccgcc 437
             ||||||||||||||||||||
Sbjct: 93725 gctcgccgcgcgcggccgcc 93706
to top
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01,
              complete sequence
          Length = 161741

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 402    gggagctcgtggacgcgctcgccgc 426
              |||||| ||||||||||||||||||
Sbjct: 149041 gggagcacgtggacgcgctcgccgc 149017
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 413     gacgcgctcgccgcgcgcggc 433
               |||||||||||||||||||||
Sbjct: 2277627 gacgcgctcgccgcgcgcggc 2277647



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 415     cgcgctcgccgcgcgcggcc 434
               ||||||||||||||||||||
Sbjct: 1803119 cgcgctcgccgcgcgcggcc 1803138



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 417     cgctcgccgcgcgcggccgc 436
               ||||||||||||||||||||
Sbjct: 1505813 cgctcgccgcgcgcggccgc 1505832
to top
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete
             sequence
          Length = 130193

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 402   gggagctcgtggacgcgctcgccgc 426
             |||||| ||||||||||||||||||
Sbjct: 49643 gggagcacgtggacgcgctcgccgc 49667
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 414     acgcgctcgccgcgcgcggcc 434
               |||||||||||||||||||||
Sbjct: 2688329 acgcgctcgccgcgcgcggcc 2688349



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 414    acgcgctcgccgcgcgcggcc 434
              |||||||||||||||||||||
Sbjct: 691820 acgcgctcgccgcgcgcggcc 691800



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 413    gacgcgctcgccgcgcgcggccgc 436
              |||| |||||||||||||||||||
Sbjct: 609256 gacgggctcgccgcgcgcggccgc 609233
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 413     gacgcgctcgccgcgcgcggc 433
               |||||||||||||||||||||
Sbjct: 3451209 gacgcgctcgccgcgcgcggc 3451229



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 416     gcgctcgccgcgcgcggccgc 436
               |||||||||||||||||||||
Sbjct: 2736345 gcgctcgccgcgcgcggccgc 2736365



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 415     cgcgctcgccgcgcgcggcc 434
               ||||||||||||||||||||
Sbjct: 3047108 cgcgctcgccgcgcgcggcc 3047127
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 402      gggagctcgtggacgcgctcgccgc 426
                |||||| ||||||||||||||||||
Sbjct: 25253065 gggagcacgtggacgcgctcgccgc 25253041
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 414     acgcgctcgccgcgcgcggcc 434
               |||||||||||||||||||||
Sbjct: 2012396 acgcgctcgccgcgcgcggcc 2012376



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 414    acgcgctcgccgcgcgcggcc 434
              |||||||||||||||||||||
Sbjct: 868720 acgcgctcgccgcgcgcggcc 868740



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 413     gacgcgctcgccgcgcgcggccgc 436
               |||| |||||||||||||||||||
Sbjct: 1929032 gacgggctcgccgcgcgcggccgc 1929009



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 406     gctcgtggacgcgctcgccgcgcgcggc 433
               |||||| ||||||||||| |||||||||
Sbjct: 1109299 gctcgtcgacgcgctcgcggcgcgcggc 1109326
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 413     gacgcgctcgccgcgcgcggc 433
               |||||||||||||||||||||
Sbjct: 3192333 gacgcgctcgccgcgcgcggc 3192353



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 416     gcgctcgccgcgcgcggccgc 436
               |||||||||||||||||||||
Sbjct: 1647135 gcgctcgccgcgcgcggccgc 1647115



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 415     cgcgctcgccgcgcgcggcc 434
               ||||||||||||||||||||
Sbjct: 2777071 cgcgctcgccgcgcgcggcc 2777090
to top
>gb|AC113339.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBb0047B19, from chromosome 10,
             complete sequence
          Length = 137015

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   ctgccgcctcgagctcctccc 297
             |||||||||||||||||||||
Sbjct: 87460 ctgccgcctcgagctcctccc 87480
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 414    acgcgctcgccgcgcgcggcc 434
              |||||||||||||||||||||
Sbjct: 851788 acgcgctcgccgcgcgcggcc 851808



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 414    acgcgctcgccgcgcgcggcc 434
              |||||||||||||||||||||
Sbjct: 790854 acgcgctcgccgcgcgcggcc 790874



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 406    gctcgtggacgcgctcgccgcgcgcggc 433
              |||||| ||||||||||| |||||||||
Sbjct: 703940 gctcgtcgacgcgctcgcggcgcgcggc 703967



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 413    gacgcgctcgccgcgcgcggccgc 436
              |||| |||||||||||||||||||
Sbjct: 586348 gacgggctcgccgcgcgcggccgc 586371
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 417     cgctcgccgcgcgcggccgcc 437
               |||||||||||||||||||||
Sbjct: 3725965 cgctcgccgcgcgcggccgcc 3725945



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 418     gctcgccgcgcgcggccgcc 437
               ||||||||||||||||||||
Sbjct: 3726053 gctcgccgcgcgcggccgcc 3726034
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 277     ctgccgcctcgagctcctccc 297
               |||||||||||||||||||||
Sbjct: 7644466 ctgccgcctcgagctcctccc 7644486
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 402      gggagctcgtggacgcgctcgccgc 426
                |||||| ||||||||||||||||||
Sbjct: 25344374 gggagcacgtggacgcgctcgccgc 25344350
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 413     gacgcgctcgccgcgcgcggc 433
               |||||||||||||||||||||
Sbjct: 8882748 gacgcgctcgccgcgcgcggc 8882768



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 262     cggcggcgtcgacgactgccgcctcgag 289
               ||||||||||| |||| |||||||||||
Sbjct: 4486783 cggcggcgtcggcgacggccgcctcgag 4486810
to top
>ref|XM_216152.3| PREDICTED: Rattus norvegicus glycyl-tRNA synthetase (predicted)
           (Gars_predicted), mRNA
          Length = 2496

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 377 caggccgcaggcgcgcgcagc 397
           |||||||||||||||||||||
Sbjct: 85  caggccgcaggcgcgcgcagc 65
to top
>ref|XM_575487.1| PREDICTED: Rattus norvegicus similar to Glycyl-tRNA synthetase
           (LOC500135), mRNA
          Length = 1398

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 377 caggccgcaggcgcgcgcagc 397
           |||||||||||||||||||||
Sbjct: 130 caggccgcaggcgcgcgcagc 110
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 160     gctccgcctcgcccggcgcctgctg 184
               ||||||||||| |||||||||||||
Sbjct: 3056966 gctccgcctcgaccggcgcctgctg 3056942
to top
>dbj|AK066712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078B10, full
           insert sequence
          Length = 1284

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 402 gggagctcgtggacgcgctcgccgc 426
           |||||| ||||||||||||||||||
Sbjct: 665 gggagcacgtggacgcgctcgccgc 641
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 410     gtggacgcgctcgccgcgcgc 430
               |||||||||||||||||||||
Sbjct: 2877359 gtggacgcgctcgccgcgcgc 2877339



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 413     gacgcgctcgccgcgcgcggccgc 436
               |||||| |||||||||||||||||
Sbjct: 1059727 gacgcgatcgccgcgcgcggccgc 1059750
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 180     tgctggccgccgcacccgacgcgct 204
               ||||||||||||| |||||||||||
Sbjct: 4480240 tgctggccgccgcccccgacgcgct 4480216
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 277     ctgccgcctcgagctcctccc 297
               |||||||||||||||||||||
Sbjct: 7648665 ctgccgcctcgagctcctccc 7648685
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 417     cgctcgccgcgcgcggccgcc 437
               |||||||||||||||||||||
Sbjct: 3734659 cgctcgccgcgcgcggccgcc 3734639



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 418     gctcgccgcgcgcggccgcc 437
               ||||||||||||||||||||
Sbjct: 3734747 gctcgccgcgcgcggccgcc 3734728
to top
>gb|U66061.1| Human germline T-cell receptor beta chain TCRBV17S1A1T, TCRBV2S1,
              TCRBV10S1P, TCRBV29S1P, TCRBV19S1P, TCRBV15S1,
              TCRBV11S1A1T, HVB relic, TCRBV28S1P, TCRBV34S1, TCRBV14S1,
              TCRBV3S1, TCRBV4S1A1T, TRY4, TRY5, TRY6, TRY7, TRY8,
              TCRBD1, TCRBJ1S1, TCRBJ1S2, TCRBJ1S3, TCRBJ1S4, TCRBJ1S5,
              TCRBJ1S6, TCRBC1, TCRBD2, TCRBJ2S1, TCRBJ2S2, TCRBJ2S3,
              TCRBJ2S4, TCRBJ2S5, TCRBJ2S6, TCRBJ2S7, TCRBC2,
              TCRBV20S1A1N2 genes from bases 452324 to 684973 (section 3
              of 3)
          Length = 232650

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     aggaaagggagacaagcatg 100
              ||||||||||||||||||||
Sbjct: 218764 aggaaagggagacaagcatg 218783
to top
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    gacgcgctcgccgcgcgcgg 432
              ||||||||||||||||||||
Sbjct: 400881 gacgcgctcgccgcgcgcgg 400862
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 179     ctgctggccgccgcacccgacgcgctcg 206
               ||||||||||||| || |||||||||||
Sbjct: 3090176 ctgctggccgccgaactcgacgcgctcg 3090149
to top
>ref|XM_608246.2| PREDICTED: Bos taurus similar to CG5020-PA, isoform A (LOC529788),
           mRNA
          Length = 3991

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 ggcggagccggacggcggcg 269
           ||||||||||||||||||||
Sbjct: 3   ggcggagccggacggcggcg 22
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     tcgcccggcgcctgctggcc 187
               ||||||||||||||||||||
Sbjct: 3605617 tcgcccggcgcctgctggcc 3605636
to top
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 169     cgcccggcgcctgctggccgccgc 192
               |||||| |||||||||||||||||
Sbjct: 1333396 cgcccgccgcctgctggccgccgc 1333419
to top
>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7
          Length = 684973

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     aggaaagggagacaagcatg 100
              ||||||||||||||||||||
Sbjct: 671087 aggaaagggagacaagcatg 671106
to top
>gb|AY214929.1| Thiocapsa roseopersicina N-acetyl-anhydromuramyl-L-alanine amidase
            (ampD), phoshatidylserine synthase (pssA), HoxE (hoxE),
            HoxF (hoxF), HoxU (hoxU), HoxY (hoxY), and HoxH (hoxH)
            genes, complete cds
          Length = 11927

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 151  cgcgccggcgctccgcctcgcccg 174
            |||| |||||||||||||||||||
Sbjct: 2222 cgcgacggcgctccgcctcgcccg 2245
to top
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome
          Length = 139962

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 405    agctcgtggacgcgctcgccgcgc 428
              ||||||||||||||||||| ||||
Sbjct: 109969 agctcgtggacgcgctcgcggcgc 109946
to top
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome
          Length = 137241

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 405    agctcgtggacgcgctcgccgcgc 428
              ||||||||||||||||||| ||||
Sbjct: 108826 agctcgtggacgcgctcgcggcgc 108803
to top
>gb|BT011189.1| Drosophila melanogaster LP11192 full insert cDNA
          Length = 3649

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  cttcctcgtgctgacgttcc 134
            ||||||||||||||||||||
Sbjct: 2118 cttcctcgtgctgacgttcc 2099
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>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   cggcgcctgctggccgccgc 192
             ||||||||||||||||||||
Sbjct: 38992 cggcgcctgctggccgccgc 39011
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    cgcgctcgccgcgcgcggcc 434
              ||||||||||||||||||||
Sbjct: 479981 cgcgctcgccgcgcgcggcc 479962
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>gb|DQ357071.1| Saccharothrix espanaensis caffeic acid biosynthetic gene locus,
            partial sequence
          Length = 6049

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  cgtggacgcgctcgccgcgc 428
            ||||||||||||||||||||
Sbjct: 4957 cgtggacgcgctcgccgcgc 4976
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>ref|NM_176176.1| Drosophila melanogaster Kinesin-73 CG8183-RB, transcript variant B
            (Khc-73), mRNA
          Length = 9063

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  cttcctcgtgctgacgttcc 134
            ||||||||||||||||||||
Sbjct: 2118 cttcctcgtgctgacgttcc 2099
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>ref|NM_135357.3| Drosophila melanogaster Kinesin-73 CG8183-RA, transcript variant A
            (Khc-73), mRNA
          Length = 7134

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  cttcctcgtgctgacgttcc 134
            ||||||||||||||||||||
Sbjct: 2118 cttcctcgtgctgacgttcc 2099
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>gb|AC104597.3| Homo sapiens BAC clone RP11-114L10 from 7, complete sequence
          Length = 161425

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    aggaaagggagacaagcatg 100
             ||||||||||||||||||||
Sbjct: 69460 aggaaagggagacaagcatg 69479
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>gb|AC099395.2| Homo sapiens BAC clone CTD-2152B9 from 7, complete sequence
          Length = 67826

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   aggaaagggagacaagcatg 100
            ||||||||||||||||||||
Sbjct: 8200 aggaaagggagacaagcatg 8181
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>gb|DQ184476.1| Orf virus strain NZ2, complete genome
          Length = 137820

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 405    agctcgtggacgcgctcgccgcgc 428
              ||||||||||||||||||| ||||
Sbjct: 109228 agctcgtggacgcgctcgcggcgc 109205
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 414     acgcgctcgccgcgcgcggc 433
               ||||||||||||||||||||
Sbjct: 4141754 acgcgctcgccgcgcgcggc 4141735



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 152     gcgccggcgctccgcctcgcccggcgcc 179
               |||||||||| ||||| |||||||||||
Sbjct: 3786673 gcgccggcgcgccgccccgcccggcgcc 3786700



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 412     ggacgcgctcgccgcgcgcg 431
               ||||||||||||||||||||
Sbjct: 2989353 ggacgcgctcgccgcgcgcg 2989334



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 418     gctcgccgcgcgcggccgcc 437
               ||||||||||||||||||||
Sbjct: 2806378 gctcgccgcgcgcggccgcc 2806397



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    gctcgccgcgcgcggccgcc 437
              ||||||||||||||||||||
Sbjct: 286316 gctcgccgcgcgcggccgcc 286335
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>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0516G10
          Length = 148937

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 414  acgcgctcgccgcgcgcggccgcc 437
            |||||| |||||||||||||||||
Sbjct: 1800 acgcgcacgccgcgcgcggccgcc 1777
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 375     tccaggccgcaggcgcgcgcagcg 398
               |||||||||| |||||||||||||
Sbjct: 4433744 tccaggccgccggcgcgcgcagcg 4433721



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     tccaggccgcaggcgcgcgc 394
               ||||||||||||||||||||
Sbjct: 1550965 tccaggccgcaggcgcgcgc 1550984
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>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0684F11
          Length = 147731

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 414    acgcgctcgccgcgcgcggccgcc 437
              |||||| |||||||||||||||||
Sbjct: 130421 acgcgcacgccgcgcgcggccgcc 130398
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gcgcctgctggccgccgcac 194
             ||||||||||||||||||||
Sbjct: 43290 gcgcctgctggccgccgcac 43309
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 418     gctcgccgcgcgcggccgcc 437
               ||||||||||||||||||||
Sbjct: 3122668 gctcgccgcgcgcggccgcc 3122687
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>gb|AC008369.1|AC008369 Drosophila melanogaster, chromosome 2R, region 52A4-52B4, P1 clones
             BACR48C01 and DS08592, complete sequence
          Length = 192366

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   cttcctcgtgctgacgttcc 134
             ||||||||||||||||||||
Sbjct: 39064 cttcctcgtgctgacgttcc 39083
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>gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40 of 73 of the complete
              sequence
          Length = 271178

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    cttcctcgtgctgacgttcc 134
              ||||||||||||||||||||
Sbjct: 116422 cttcctcgtgctgacgttcc 116441
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>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 167   ctcgcccggcgcctgctggccgccgcacccgacgcg 202
             ||||| ||||| |||||| |||||||||||| ||||
Sbjct: 76534 ctcgcgcggcggctgctgcccgccgcacccggcgcg 76499
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     cggcgcctgctggccgccgc 192
               ||||||||||||||||||||
Sbjct: 1740668 cggcgcctgctggccgccgc 1740649
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>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    gcggagccggacggcggcgt 270
              ||||||||||||||||||||
Sbjct: 275495 gcggagccggacggcggcgt 275514
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>gb|U81788.1|DMU81788 Drosophila melanogaster kinesin-73 mRNA, complete cds
          Length = 7107

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  cttcctcgtgctgacgttcc 134
            ||||||||||||||||||||
Sbjct: 2093 cttcctcgtgctgacgttcc 2074
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>dbj|AB020214.1| Oryctolagus cuniculus c-fos mRNA, partial sequence
          Length = 605

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 389 gcgcgcagcgtcggggagct 408
           ||||||||||||||||||||
Sbjct: 556 gcgcgcagcgtcggggagct 537


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,758,880
Number of Sequences: 3902068
Number of extensions: 2758880
Number of successful extensions: 64376
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 55688
Number of HSP's gapped (non-prelim): 8684
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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