| Clone Name | bast73c03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE004920.1| Pseudomonas aeruginosa PAO1, section 481 of 529 of the complete genome Length = 12978 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 140 ggagaccgtccaggtcgccaccgccat 166 |||||||| |||||||||||||||||| Sbjct: 4455 ggagaccgaccaggtcgccaccgccat 4481
>gb|AY796245.1| Weissia hedwigii isolate 1350 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 758 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 254 caccacccccgacgccaccaccacca 279 ||||||||||| |||||||||||||| Sbjct: 135 caccacccccgccgccaccaccacca 110
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 141 gagaccgtccaggtcgccaccgccat 166 ||||||| |||||||||||||||||| Sbjct: 433843 gagaccgaccaggtcgccaccgccat 433818
>gb|AY596620.1| Saccharum officinarum clone SCCCLR1C04H09, complete sequence Length = 1516 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 394 agccgcagccggaggagcagcagcag 419 ||||| |||||||||||||||||||| Sbjct: 1119 agccggagccggaggagcagcagcag 1144
>gb|AC095013.1| Drosophila melanogaster, chromosome 3R, region 83F-83F, BAC clone BACR19I14, complete sequence Length = 175648 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 gcagccggaggagcagcagcag 419 |||||||||||||||||||||| Sbjct: 76529 gcagccggaggagcagcagcag 76550
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 229 cccgcgacgtccgcgtcgaggtcgtc 254 |||||||||||| ||||||||||||| Sbjct: 3840807 cccgcgacgtccccgtcgaggtcgtc 3840782
>gb|AC008001.1|AC008001 Drosophila melanogaster, chromosome 3R, region 83E7-83F2, P1 clones DS04679 and DS07437, complete sequence Length = 130149 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 gcagccggaggagcagcagcag 419 |||||||||||||||||||||| Sbjct: 18110 gcagccggaggagcagcagcag 18089
>gb|AE003674.3| Drosophila melanogaster chromosome 3R, section 10 of 118 of the complete sequence Length = 298020 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 gcagccggaggagcagcagcag 419 |||||||||||||||||||||| Sbjct: 130673 gcagccggaggagcagcagcag 130694
>ref|XM_425652.1| PREDICTED: Gallus gallus similar to solute carrier family 5 (choline transporter), member 7 (LOC428094), mRNA Length = 1428 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 60 gcagcagtagcgatggctcccaagc 84 ||||||| ||||||||||||||||| Sbjct: 665 gcagcagcagcgatggctcccaagc 641
>ref|XM_504379.1| Yarrowia lipolytica CLIB122, YALI0E25047g predicted mRNA Length = 762 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 gaggagaccgtccaggtcgcc 158 ||||||||||||||||||||| Sbjct: 721 gaggagaccgtccaggtcgcc 741
>emb|AL354808.24| Human DNA sequence from clone RP11-523H24 on chromosome 13 Contains the 3' end of a novel gene, the gene for paraspeckle protein 1 (PSP1) (FLJ10955), two novel genes, a sialyltransferase 7D (SIAT7D) pseudogene, the 3' end of a variant of the ZNF237 gene for zinc finger protein 237 and two CpG islands, complete sequence Length = 169303 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ccaccgccatcctccccgact 177 ||||||||||||||||||||| Sbjct: 2190 ccaccgccatcctccccgact 2210
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 ccccgacgccaccaccaccaa 280 ||||||||||||||||||||| Sbjct: 2577 ccccgacgccaccaccaccaa 2597
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 gtcgacgaccagccggaggtcgtcg 216 ||||||||||| ||||||||||||| Sbjct: 108502 gtcgacgaccacccggaggtcgtcg 108526
>dbj|AK092600.1| Homo sapiens cDNA FLJ35281 fis, clone PROST2007248 Length = 3528 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ccaccgccatcctccccgact 177 ||||||||||||||||||||| Sbjct: 3450 ccaccgccatcctccccgact 3430
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 cgtcaccacccccgacgccaccaccacca 279 |||||||||| ||| |||||||||||||| Sbjct: 2848020 cgtcaccaccgccggcgccaccaccacca 2848048
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 cgtcaccacccccgacgccaccaccacca 279 |||||||||| ||| |||||||||||||| Sbjct: 91501 cgtcaccaccgccggcgccaccaccacca 91529
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 cgtcaccacccccgacgccaccaccacca 279 |||||||||| ||| |||||||||||||| Sbjct: 8166 cgtcaccaccgccggcgccaccaccacca 8194
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 gaggagaccgtccaggtcgcc 158 ||||||||||||||||||||| Sbjct: 2998607 gaggagaccgtccaggtcgcc 2998587
>gb|AE010317.1| Methanopyrus kandleri AV19 section 16 of 157 of the complete genome Length = 13319 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ccaggacgtcgacgaccagc 204 |||||||||||||||||||| Sbjct: 5865 ccaggacgtcgacgaccagc 5884
>ref|XM_508216.1| PREDICTED: Pan troglodytes similar to hypothetical gene supported by AY129010 (LOC450946), mRNA Length = 918 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 889 cagcctgaggagcagcagcagggc 912
>ref|XM_479235.1| Oryza sativa (japonica cultivar-group), mRNA Length = 762 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 239 ccgcgtcgaggtcgtcaccacccccgacgcca 270 |||||||| |||||||||| ||||||||||| Sbjct: 336 ccgcgtcgtcgtcgtcaccaaccccgacgcca 367
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cgacggcgcgcccaagccgc 399 |||||||||||||||||||| Sbjct: 751112 cgacggcgcgcccaagccgc 751131
>ref|XM_367367.1| Magnaporthe grisea 70-15 predicted protein (MG07292.4) partial mRNA Length = 849 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccacccccgacgccaccaccacca 279 ||||||||| |||||||||||||| Sbjct: 415 ccacccccgccgccaccaccacca 438
>ref|XM_362750.1| Magnaporthe grisea 70-15 hypothetical protein (MG08298.4) partial mRNA Length = 1869 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cccccgacgccaccaccacc 278 |||||||||||||||||||| Sbjct: 1375 cccccgacgccaccaccacc 1356
>ref|XM_324299.1| Neurospora crassa OR74A hypothetical protein (NCU04943.1) partial mRNA Length = 795 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 catcctccccgactccgcca 183 |||||||||||||||||||| Sbjct: 465 catcctccccgactccgcca 446
>gb|AC148310.2| Pan troglodytes BAC clone RP43-31J11 from 7, complete sequence Length = 203635 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 97682 cagcctgaggagcagcagcagggc 97705 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 86853 cagcctgaggagcagcagcagggc 86876
>ref|XM_954298.1| Neurospora crassa OR74A hypothetical protein (NCU04943.1) partial mRNA Length = 795 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 catcctccccgactccgcca 183 |||||||||||||||||||| Sbjct: 465 catcctccccgactccgcca 446
>ref|XM_955059.1| Neurospora crassa OR74A hypothetical protein (NCU09870.1) partial mRNA Length = 1740 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 agccggaggagcagcagcag 419 |||||||||||||||||||| Sbjct: 1617 agccggaggagcagcagcag 1598
>ref|XM_956607.1| Neurospora crassa OR74A hypothetical protein (NCU01088.1) partial mRNA Length = 1509 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccgacgccaccaccaccaag 281 |||||||||||||||||||| Sbjct: 1064 ccgacgccaccaccaccaag 1045
>ref|XM_326580.1| Neurospora crassa OR74A hypothetical protein (NCU01088.1) partial mRNA Length = 1509 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccgacgccaccaccaccaag 281 |||||||||||||||||||| Sbjct: 1064 ccgacgccaccaccaccaag 1045
>ref|XM_330791.1| Neurospora crassa OR74A hypothetical protein (NCU09870.1) partial mRNA Length = 1740 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 agccggaggagcagcagcag 419 |||||||||||||||||||| Sbjct: 1617 agccggaggagcagcagcag 1598
>ref|NM_001012708.1| Homo sapiens keratin associated protein 5-3 (KRTAP5-3), mRNA Length = 899 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 704 cagcctgaggagcagcagcagggc 681 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 617 cagcctgaggagcagcagcagggc 594 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 500 cagcctgaggagcagcagcagggc 477
>ref|NM_001012710.1| Homo sapiens keratin associated protein 5-10 (KRTAP5-10), mRNA Length = 1058 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 486 cagcctgaggagcagcagcagggc 463
>gb|AY597812.1| Homo sapiens chromosome 11 UHS KerB-like mRNA, complete cds Length = 717 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 626 cagcctgaggagcagcagcagggc 603 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 539 cagcctgaggagcagcagcagggc 516 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 422 cagcctgaggagcagcagcagggc 399
>ref|NM_001012503.1| Homo sapiens keratin associated protein 5-7 (KRTAP5-7), mRNA Length = 898 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 354 cagcctgaggagcagcagcagggc 331
>ref|XM_982685.1| PREDICTED: Mus musculus MYST histone acetyltransferase (monocytic leukemia) 3, transcript variant 3 (Myst3), mRNA Length = 8822 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 caccacccccgacgccaccaccac 277 ||||||||||| |||||||||||| Sbjct: 5178 caccacccccgccgccaccaccac 5201
>ref|XM_910540.2| PREDICTED: Mus musculus MYST histone acetyltransferase (monocytic leukemia) 3, transcript variant 6 (Myst3), mRNA Length = 8959 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 caccacccccgacgccaccaccac 277 ||||||||||| |||||||||||| Sbjct: 5261 caccacccccgccgccaccaccac 5284
>ref|XM_146248.7| PREDICTED: Mus musculus MYST histone acetyltransferase (monocytic leukemia) 3, transcript variant 1 (Myst3), mRNA Length = 9126 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 caccacccccgacgccaccaccac 277 ||||||||||| |||||||||||| Sbjct: 5431 caccacccccgccgccaccaccac 5454
>ref|XM_743784.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g06330) partial mRNA Length = 360 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 ccacccccgacgccaccaccacca 279 ||||||||| |||||||||||||| Sbjct: 347 ccacccccgccgccaccaccacca 324
>gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome 8, complete sequence Length = 235095 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 caccacccccgacgccaccaccac 277 ||||||||||| |||||||||||| Sbjct: 128010 caccacccccgccgccaccaccac 128033
>gb|AC122370.4| Mus musculus BAC clone RP23-459B8 from chromosome 8, complete sequence Length = 176045 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccaccaccaccaagaagcag 287 |||||||||||||||||||| Sbjct: 57468 ccaccaccaccaagaagcag 57449
>ref|XM_547689.2| PREDICTED: Canis familiaris similar to coiled-coil domain containing 11 (LOC490567), mRNA Length = 1747 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gtcaagaccaagaccaaggt 133 |||||||||||||||||||| Sbjct: 121 gtcaagaccaagaccaaggt 102
>gb|AC145724.1| Pan troglodytes BAC clone RP43-22E12 from 7, complete sequence Length = 152426 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccaccaccaccaagaagcag 287 |||||||||||||||||||| Sbjct: 15050 ccaccaccaccaagaagcag 15031
>gb|AY360461.1| Homo sapiens UHS KERB-like protein mRNA, complete cds Length = 564 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 299 cagcctgaggagcagcagcagggc 276
>emb|X59872.2|TAHISTH1 T.aestivum L mRNA for histone H1 Length = 1031 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 accaagaagcagcccgccgccaag 299 ||||||||| |||||||||||||| Sbjct: 469 accaagaagaagcccgccgccaag 492
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cgacggcgcgcccaagccgc 399 |||||||||||||||||||| Sbjct: 64866 cgacggcgcgcccaagccgc 64885
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cgacggcgcgcccaagccgc 399 |||||||||||||||||||| Sbjct: 83908 cgacggcgcgcccaagccgc 83927
>emb|AL670008.1|NCB13O8 Neurospora crassa DNA linkage group V BAC contig B13O8 Length = 80765 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccgacgccaccaccaccaag 281 |||||||||||||||||||| Sbjct: 79553 ccgacgccaccaccaccaag 79572
>emb|AL670007.1|NCB14A6 Neurospora crassa DNA linkage group V BAC contig B14A6 Length = 91436 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccgacgccaccaccaccaag 281 |||||||||||||||||||| Sbjct: 6672 ccgacgccaccaccaccaag 6691
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ccgcgacgtccgcgtcgagg 249 |||||||||||||||||||| Sbjct: 76535 ccgcgacgtccgcgtcgagg 76554
>emb|AJ628247.1| Homo sapiens mRNA for keratin associated protein 5-11 (KRTAP5-11 gene), clone scl342 Length = 1095 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 526 cagcctgaggagcagcagcagggc 503
>emb|AJ628246.1| Homo sapiens partial mRNA for keratin associated protein 5-9 (KRTAP5-9 gene), clone scl320 Length = 994 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 414 cagcctgaggagcagcagcagggc 391 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 327 cagcctgaggagcagcagcagggc 304 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 210 cagcctgaggagcagcagcagggc 187
>emb|AJ582817.3| Streptomyces kanamyceticus kanamycin biosynthetic gene cluster, strain ATCC12853 Length = 47050 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 cgacgtccgcgtcgaggtcgtcaccacc 260 ||||||||||| |||||||||| ||||| Sbjct: 12982 cgacgtccgcggcgaggtcgtcgccacc 12955
>emb|AJ006692.1|HSA6692 Homo sapiens UHS KerB gene Length = 2285 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 1594 cagcctgaggagcagcagcagggc 1571
>gb|AC103813.2| Homo sapiens chromosome 8, clone CTD-2253H3, complete sequence Length = 84129 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 acacttgtgcaaagccactt 23 |||||||||||||||||||| Sbjct: 39012 acacttgtgcaaagccactt 38993
>ref|NM_021046.1| Homo sapiens keratin associated protein 5-8 (KRTAP5-8), mRNA Length = 585 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 320 cagcctgaggagcagcagcagggc 297
>gb|AC022973.5| Homo sapiens, clone RP11-473O4, complete sequence Length = 194367 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 acacttgtgcaaagccactt 23 |||||||||||||||||||| Sbjct: 34028 acacttgtgcaaagccactt 34009
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ccgcgacgtccgcgtcgagg 249 |||||||||||||||||||| Sbjct: 32180846 ccgcgacgtccgcgtcgagg 32180865
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcgccaccgccatcctcccc 173 |||||||||||||||||||| Sbjct: 15354512 tcgccaccgccatcctcccc 15354493 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccagccggaggtcgtcgacg 219 |||||||||||||||||||| Sbjct: 8981726 ccagccggaggtcgtcgacg 8981707
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 aagaccaagaccaaggtggt 136 |||||||||||||||||||| Sbjct: 22491351 aagaccaagaccaaggtggt 22491332
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 239 ccgcgtcgaggtcgtcaccacccccgacgcca 270 |||||||| |||||||||| ||||||||||| Sbjct: 26171508 ccgcgtcgtcgtcgtcaccaaccccgacgcca 26171477
>gb|AC130310.17| Homo sapiens chromosome 11, clone RP11-269A12, complete sequence Length = 155537 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 47976 cagcctgaggagcagcagcagggc 47953 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 25429 cagcctgaggagcagcagcagggc 25452 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 25312 cagcctgaggagcagcagcagggc 25335 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 25225 cagcctgaggagcagcagcagggc 25248
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tcgaggagaccgtccaggtc 155 |||||||||||||||||||| Sbjct: 5214235 tcgaggagaccgtccaggtc 5214216
>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1331F11 Length = 132205 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 aagaccaagaccaaggtggt 136 |||||||||||||||||||| Sbjct: 6552 aagaccaagaccaaggtggt 6533
>dbj|AB126079.1| Homo sapiens KRTAP5-10 mRNA for keratin associated protein, complete cds Length = 1058 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 486 cagcctgaggagcagcagcagggc 463
>dbj|AB126077.1| Homo sapiens KRTAP5-8 mRNA for keratin associated protein, complete cds Length = 1025 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 330 cagcctgaggagcagcagcagggc 307
>dbj|AB126076.1| Homo sapiens KRTAP5-7 mRNA for keratin associated protein, complete cds Length = 898 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 354 cagcctgaggagcagcagcagggc 331
>dbj|AB126074.1| Homo sapiens KRTAP5-5 mRNA for keratin associated protein, complete cds Length = 885 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 554 cagcctgaggagcagcagcagggc 531
>dbj|AB126072.1| Homo sapiens KRTAP5-3 mRNA for keratin associated protein, complete cds Length = 899 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 704 cagcctgaggagcagcagcagggc 681 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 617 cagcctgaggagcagcagcagggc 594 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 500 cagcctgaggagcagcagcagggc 477
>emb|AJ007491.1|BYDV7491 Barley yellow dwarf virus genes encoding coat protein, movement protein, and readthrough protein, isolate FHv1-PAV Length = 2754 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cctgccgtgccagtggtggt 340 |||||||||||||||||||| Sbjct: 557 cctgccgtgccagtggtggt 538
>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete sequence Length = 190267 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 125758 cagcctgaggagcagcagcagggc 125735 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 103376 cagcctgaggagcagcagcagggc 103399 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 103259 cagcctgaggagcagcagcagggc 103282 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 103172 cagcctgaggagcagcagcagggc 103195
>dbj|AK106505.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-F12, full insert sequence Length = 1228 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aagaccaagaccaaggtggt 136 |||||||||||||||||||| Sbjct: 488 aagaccaagaccaaggtggt 507
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ccgcgacgtccgcgtcgagg 249 |||||||||||||||||||| Sbjct: 757 ccgcgacgtccgcgtcgagg 776
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ccgcgacgtccgcgtcgagg 249 |||||||||||||||||||| Sbjct: 761 ccgcgacgtccgcgtcgagg 780
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 239 ccgcgtcgaggtcgtcaccacccccgacgcca 270 |||||||| |||||||||| ||||||||||| Sbjct: 63366 ccgcgtcgtcgtcgtcaccaaccccgacgcca 63335
>gb|AF107023.1|AF107023 Triticum aestivum histone H1 WH1A.2 mRNA, complete cds Length = 1019 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 accaagaagcagcccgccgccaag 299 ||||||||| |||||||||||||| Sbjct: 435 accaagaagaagcccgccgccaag 458
>gb|AF107022.1|AF107022 Triticum aestivum histone H1 WH1A.1 mRNA, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 accaagaagcagcccgccgccaag 299 ||||||||| |||||||||||||| Sbjct: 443 accaagaagaagcccgccgccaag 466
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ccgcgacgtccgcgtcgagg 249 |||||||||||||||||||| Sbjct: 32016 ccgcgacgtccgcgtcgagg 32035
>emb|AL353668.20| Human DNA sequence from clone RP11-184B18 on chromosome 8, complete sequence Length = 177277 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 acacttgtgcaaagccactt 23 |||||||||||||||||||| Sbjct: 95541 acacttgtgcaaagccactt 95560
>dbj|AP005715.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1181D6, complete sequence Length = 134425 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 acacttgtgcaaagccactt 23 |||||||||||||||||||| Sbjct: 33198 acacttgtgcaaagccactt 33217
>dbj|AP002387.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-660L16, complete sequence Length = 170523 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 149718 cagcctgaggagcagcagcagggc 149695
>gb|AC163630.5| Mus musculus BAC clone RP23-139M2 from chromosome 16, complete sequence Length = 231703 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 gcagccggaggagcagcagcaggg 421 ||||| |||||||||||||||||| Sbjct: 159337 gcagcaggaggagcagcagcaggg 159360
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cgacggcgcgcccaagccgc 399 |||||||||||||||||||| Sbjct: 4599173 cgacggcgcgcccaagccgc 4599192
>gb|AC173707.2| Mus musculus BAC clone RP23-296A12 from chromosome 16, complete sequence Length = 171458 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 gcagccggaggagcagcagcaggg 421 ||||| |||||||||||||||||| Sbjct: 130609 gcagcaggaggagcagcagcaggg 130586
>emb|AJ628422.2| Streptomyces kanamyceticus partial kanamycin biosynthesis gene cluster, strain DSM 40500 Length = 41576 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 cgacgtccgcgtcgaggtcgtcaccacc 260 ||||||||||| |||||||||| ||||| Sbjct: 9755 cgacgtccgcggcgaggtcgtcgccacc 9728
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcgccaccgccatcctcccc 173 |||||||||||||||||||| Sbjct: 15308795 tcgccaccgccatcctcccc 15308776 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccagccggaggtcgtcgacg 219 |||||||||||||||||||| Sbjct: 8981609 ccagccggaggtcgtcgacg 8981590
>emb|AL844496.4|CNS08CAT Oryza sativa chromosome 12, . BAC OSJNBb0026N09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135462 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccagccggaggtcgtcgacg 219 |||||||||||||||||||| Sbjct: 50495 ccagccggaggtcgtcgacg 50476
>gb|AC163696.3| Ornithorhynchus anatinus BAC clone OABb-153I22 from chromosome unknown, complete sequence Length = 139018 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tcactactagttcaccctcc 48 |||||||||||||||||||| Sbjct: 122010 tcactactagttcaccctcc 122029
>emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa0036B12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151541 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tcgccaccgccatcctcccc 173 |||||||||||||||||||| Sbjct: 129905 tcgccaccgccatcctcccc 129886
>gb|M20912.1|HUMTHBA Human tyrosine hydroxylase (HTH-2) protein mRNA, 5' end Length = 111 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ccacccccgacgccaccacc 275 |||||||||||||||||||| Sbjct: 5 ccacccccgacgccaccacc 24
>gb|M20911.1|HUMTHA Human tyrosine hydroxylase (HTH-1) protein mRNA, 5' end Length = 99 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ccacccccgacgccaccacc 275 |||||||||||||||||||| Sbjct: 5 ccacccccgacgccaccacc 24
>gb|M15379.1|CHKAGLBA Chicken alpha-globin-A gene, complete cds Length = 429 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gccaccaccaccaagaagca 286 |||||||||||||||||||| Sbjct: 332 gccaccaccaccaagaagca 313
>gb|M14651.1|DROGBRN D.yakuba glue gene cluster 68C boundary region Length = 1853 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 caccacccccgacgccaccaccac 277 ||||||| |||||||||||||||| Sbjct: 1817 caccaccaccgacgccaccaccac 1840
>dbj|D16310.1|MSGRPLL M. bovis rplL gene for ribosomal protein L7/L12 Length = 631 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cgacggcgcgcccaagccgc 399 |||||||||||||||||||| Sbjct: 372 cgacggcgcgcccaagccgc 391
>dbj|AP000867.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-684B2, complete sequences Length = 199999 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 93945 cagcctgaggagcagcagcagggc 93922 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cagccggaggagcagcagcagggc 422 ||||| |||||||||||||||||| Sbjct: 55517 cagcctgaggagcagcagcagggc 55494 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,051,644 Number of Sequences: 3902068 Number of extensions: 4051644 Number of successful extensions: 103123 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101780 Number of HSP's gapped (non-prelim): 1342 length of query: 457 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 435 effective length of database: 17,147,199,772 effective search space: 7459031900820 effective search space used: 7459031900820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)