ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast73b12 |
|---|---|
| Clone Library Name | barley_pub |
>PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 143 bits (361), Expect = 1e-34 Identities = 70/71 (98%), Positives = 70/71 (98%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH Sbjct: 129 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 188 Query: 182 FLLGRLLMEDL 214 FLL RLLMEDL Sbjct: 189 FLLARLLMEDL 199
>PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 143 bits (361), Expect = 1e-34 Identities = 70/71 (98%), Positives = 70/71 (98%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH Sbjct: 129 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 188 Query: 182 FLLGRLLMEDL 214 FLL RLLMEDL Sbjct: 189 FLLARLLMEDL 199
>POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (PCR)| (NADPH-protochlorophyllide oxidoreductase) (POR) (Fragment) Length = 313 Score = 134 bits (337), Expect = 6e-32 Identities = 66/71 (92%), Positives = 68/71 (95%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTAR PTFTA+G EMSVGVNHLGH Sbjct: 54 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARKPTFTAEGVEMSVGVNHLGH 113 Query: 182 FLLGRLLMEDL 214 FLL RLL+EDL Sbjct: 114 FLLARLLLEDL 124
>PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 405 Score = 125 bits (315), Expect = 2e-29 Identities = 59/71 (83%), Positives = 66/71 (92%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 MHLDLASLDSVRQFVD FRRAEMPLDVLVCNAA+Y+PTA PTFTA+G E+SVG+NHLGH Sbjct: 147 MHLDLASLDSVRQFVDNFRRAEMPLDVLVCNAAVYQPTANQPTFTAEGFELSVGINHLGH 206 Query: 182 FLLGRLLMEDL 214 FLL RLL++DL Sbjct: 207 FLLSRLLIDDL 217
>POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 120 bits (301), Expect = 1e-27 Identities = 56/71 (78%), Positives = 64/71 (90%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 MHLDLASLDSVRQFV+ FRR+E PLDVLVCNAA+Y PTA+ PT+TADG E+SVG NHLGH Sbjct: 140 MHLDLASLDSVRQFVETFRRSERPLDVLVCNAAVYFPTAKEPTYTADGFELSVGTNHLGH 199 Query: 182 FLLGRLLMEDL 214 FLL RLL++DL Sbjct: 200 FLLSRLLLDDL 210
>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 399 Score = 119 bits (297), Expect = 3e-27 Identities = 57/71 (80%), Positives = 64/71 (90%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 MHLDLASLDSVRQFVD FRR+EMPLDVL+ NAA+Y PTA+ P+FTADG E+SVG NHLGH Sbjct: 141 MHLDLASLDSVRQFVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHLGH 200 Query: 182 FLLGRLLMEDL 214 FLL RLL+EDL Sbjct: 201 FLLSRLLLEDL 211
>PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 118 bits (295), Expect = 5e-27 Identities = 56/71 (78%), Positives = 63/71 (88%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 MHLDLASLDSVRQFVD FR++ PLDVLVCNAA+Y PTA+ PTFTA+G E+SVG NHLGH Sbjct: 141 MHLDLASLDSVRQFVDNFRQSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGH 200 Query: 182 FLLGRLLMEDL 214 FLL RLL+EDL Sbjct: 201 FLLSRLLLEDL 211
>PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast precursor (EC| 1.3.1.33) (PCR C) (NADPH-protochlorophyllide oxidoreductase C) (POR C) Length = 401 Score = 116 bits (290), Expect = 2e-26 Identities = 53/71 (74%), Positives = 64/71 (90%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 MHLDLASL+SV+QFV+ FRR E PLDVLVCNAA+Y+PTA+ P+FTA+G E+SVG NHLGH Sbjct: 144 MHLDLASLESVKQFVENFRRTEQPLDVLVCNAAVYQPTAKEPSFTAEGFEISVGTNHLGH 203 Query: 182 FLLGRLLMEDL 214 FLL RLL++DL Sbjct: 204 FLLSRLLLDDL 214
>PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 401 Score = 115 bits (288), Expect = 3e-26 Identities = 54/71 (76%), Positives = 62/71 (87%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 MHLDLASLDSVRQFVD FRR E PLDVLVCNAA+Y PTA+ PT++A+G E+SV NHLGH Sbjct: 143 MHLDLASLDSVRQFVDNFRRTETPLDVLVCNAAVYFPTAKEPTYSAEGFELSVATNHLGH 202 Query: 182 FLLGRLLMEDL 214 FLL RLL++DL Sbjct: 203 FLLARLLLDDL 213
>PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 395 Score = 113 bits (283), Expect = 1e-25 Identities = 53/71 (74%), Positives = 63/71 (88%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 +HLDLASLDSVRQFV R+ +MP+DV+VCNAA+Y+PTA+ P+FTADG EMSVGVNHLGH Sbjct: 137 VHLDLASLDSVRQFVKNVRQLDMPIDVVVCNAAVYQPTAKEPSFTADGFEMSVGVNHLGH 196 Query: 182 FLLGRLLMEDL 214 FLL R L+EDL Sbjct: 197 FLLARELLEDL 207
>POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 458 Score = 105 bits (262), Expect = 3e-23 Identities = 50/71 (70%), Positives = 57/71 (80%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 +H DLAS DSVR FVD FRR E LDVLVCNAA+Y PT + P F+A+G E+SVG NH+GH Sbjct: 200 IHCDLASFDSVRAFVDNFRRTERQLDVLVCNAAVYFPTDKEPKFSAEGFELSVGTNHMGH 259 Query: 182 FLLGRLLMEDL 214 FLL RLLMEDL Sbjct: 260 FLLARLLMEDL 270
>POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 397 Score = 100 bits (249), Expect = 1e-21 Identities = 47/71 (66%), Positives = 57/71 (80%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 +HLDL+SL+SVRQFV F+ + LD LVCNAA+Y PTA+ P FTADG E+SVG NHLGH Sbjct: 140 LHLDLSSLESVRQFVQNFKASGRRLDALVCNAAVYLPTAKEPRFTADGFELSVGTNHLGH 199 Query: 182 FLLGRLLMEDL 214 FLL LL++DL Sbjct: 200 FLLTNLLLDDL 210
>POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 86.3 bits (212), Expect = 2e-17 Identities = 40/71 (56%), Positives = 51/71 (71%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 MH+DL SLDSVR+FV FR + LD LVCNAA++ P + P + +G+E+SV NH GH Sbjct: 60 MHIDLGSLDSVRKFVTQFRESGKSLDALVCNAAVHMPLLKEPMRSPEGYELSVATNHFGH 119 Query: 182 FLLGRLLMEDL 214 FLL LL+EDL Sbjct: 120 FLLCNLLLEDL 130
>POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 82.4 bits (202), Expect = 3e-16 Identities = 41/69 (59%), Positives = 48/69 (69%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFL 187 LDL LDSVR+FV FR PL LVCNAA+Y P P ++AD +E+SV NHLGHFL Sbjct: 62 LDLGYLDSVRRFVAQFRELGRPLKALVCNAAVYFPLLDEPLWSADDYELSVATNHLGHFL 121 Query: 188 LGRLLMEDL 214 L LL+EDL Sbjct: 122 LCNLLLEDL 130
>WWOX_CHICK (Q5F389) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 65.5 bits (158), Expect = 4e-11 Identities = 38/71 (53%), Positives = 47/71 (66%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 M LDLASL SV+ F +AF+ MPL +LVCNAAI+ + T DG E + VNHLGH Sbjct: 180 MTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIF---GSSWCLTEDGLESTFQVNHLGH 236 Query: 182 FLLGRLLMEDL 214 F L +LL ED+ Sbjct: 237 FYLVQLL-EDI 246
>WWOX_BRARE (Q803A8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 412 Score = 64.7 bits (156), Expect = 6e-11 Identities = 36/69 (52%), Positives = 45/69 (65%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFL 187 LDLASL SVRQF + F+ ++PL VLVCNAA+ R T DG E + + HLGHFL Sbjct: 179 LDLASLRSVRQFAELFKATKLPLHVLVCNAAVCSQPWR---LTEDGFESTFQICHLGHFL 235 Query: 188 LGRLLMEDL 214 L +LL + L Sbjct: 236 LVQLLQDVL 244
>RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 331 Score = 63.5 bits (153), Expect = 1e-10 Identities = 35/70 (50%), Positives = 43/70 (61%) Frame = +2 Query: 5 HLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHF 184 HLDLASL S+R+F E +D+L+ NA + R T T DG EM GVNHLGHF Sbjct: 95 HLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHWT---TEDGFEMQFGVNHLGHF 151 Query: 185 LLGRLLMEDL 214 LL LL++ L Sbjct: 152 LLTNLLLDKL 161
>WWOX_HUMAN (Q9NZC7) WW domain-containing oxidoreductase (EC 1.1.1.-) (Fragile| site FRA16D oxidoreductase) Length = 414 Score = 62.0 bits (149), Expect = 4e-10 Identities = 36/71 (50%), Positives = 45/71 (63%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 M LDLA L SV+ F +AF+ +PL VLVCNAA + A + T DG E + VNHLGH Sbjct: 180 MTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATF---ALPWSLTKDGLETTFQVNHLGH 236 Query: 182 FLLGRLLMEDL 214 F L +LL + L Sbjct: 237 FYLVQLLQDVL 247
>DHRSX_HUMAN (Q8N5I4) Dehydrogenase/reductase SDR family member on chromosome X| precursor (EC 1.1.-.-) (DHRSXY) Length = 330 Score = 61.2 bits (147), Expect = 7e-10 Identities = 32/71 (45%), Positives = 45/71 (63%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 ++ DLAS+ S+RQFV F+ ++PL VL+ NA + R T DG E G+N+LGH Sbjct: 99 LYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRK---TRDGFEEHFGLNYLGH 155 Query: 182 FLLGRLLMEDL 214 FLL LL++ L Sbjct: 156 FLLTNLLLDTL 166
>WWOX_PONPY (Q5R9W5) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 60.8 bits (146), Expect = 9e-10 Identities = 35/69 (50%), Positives = 44/69 (63%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFL 187 LDLA L SV+ F +AF+ +PL VLVCNAA + A + T DG E + VNHLGHF Sbjct: 182 LDLALLRSVQHFAEAFKAKNVPLHVLVCNAATF---ALPWSLTKDGLETTFQVNHLGHFY 238 Query: 188 LGRLLMEDL 214 L +LL + L Sbjct: 239 LVQLLQDVL 247
>RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 334 Score = 60.5 bits (145), Expect = 1e-09 Identities = 35/69 (50%), Positives = 44/69 (63%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFL 187 LDLASL S+R+F + E +D+LV NAA+ R T T DG EM GVN+LGHFL Sbjct: 96 LDLASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWT---TEDGFEMQFGVNYLGHFL 152 Query: 188 LGRLLMEDL 214 L LL++ L Sbjct: 153 LTNLLLDKL 161
>RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 334 Score = 59.7 bits (143), Expect = 2e-09 Identities = 35/66 (53%), Positives = 40/66 (60%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFL 187 LDLASL SVR F + E LDVL+ NA ++ T T DG EM GVNHLGHFL Sbjct: 112 LDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPY---TKTEDGFEMQFGVNHLGHFL 168 Query: 188 LGRLLM 205 L LL+ Sbjct: 169 LTNLLL 174
>RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 336 Score = 59.3 bits (142), Expect = 3e-09 Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHF 184 LDLASL SVR F + E LDVL+ NA I++ P +T DG EM GVNHLGHF Sbjct: 114 LDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTE----DGFEMQFGVNHLGHF 169 Query: 185 LLGRLLM 205 LL LL+ Sbjct: 170 LLTNLLL 176
>RDH11_HUMAN (Q8TC12) Retinol dehydrogenase 11 (EC 1.1.1.-) (Retinal reductase| 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (HCV core-binding protein HCBP12) Length = 318 Score = 58.5 bits (140), Expect = 4e-09 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHF 184 LDL+ S+R F F E L VL+ NA + P ++T ADG EM +GVNHLGHF Sbjct: 99 LDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKT----ADGFEMHIGVNHLGHF 154 Query: 185 LLGRLLMEDL 214 LL LL+E L Sbjct: 155 LLTHLLLEKL 164
>RDH11_MOUSE (Q9QYF1) Retinol dehydrogenase 11 (EC 1.1.1.-) (Retinal reductase| 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (Short-chain aldehyde dehydrogenase) (SCALD) (Cell line M Length = 316 Score = 57.8 bits (138), Expect = 8e-09 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHF 184 LDLA S+R F F E L +L+ NA + P ++T ADG EM +GVNHLGHF Sbjct: 96 LDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKT----ADGFEMHIGVNHLGHF 151 Query: 185 LLGRLLMEDL 214 LL LL+E L Sbjct: 152 LLTHLLLEKL 161
>WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 56.2 bits (134), Expect = 2e-08 Identities = 34/71 (47%), Positives = 42/71 (59%) Frame = +2 Query: 2 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGH 181 M LDLA L SV+ F +AF+ + L VLVCNA + A T DG E + VNHLGH Sbjct: 180 MTLDLAVLRSVQHFAEAFKAKNVSLHVLVCNAGTF---ALPWGLTKDGLETTFQVNHLGH 236 Query: 182 FLLGRLLMEDL 214 F L +LL + L Sbjct: 237 FYLVQLLQDVL 247
>RDH12_HUMAN (Q96NR8) Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis| retinol dehydrogenase) Length = 316 Score = 56.2 bits (134), Expect = 2e-08 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHF 184 LDL+ S+R F + F E L +L+ NA + P ++T ADG E +GVNHLGHF Sbjct: 97 LDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKT----ADGFETHLGVNHLGHF 152 Query: 185 LLGRLLMEDL 214 LL LL+E L Sbjct: 153 LLTYLLLEQL 162
>DHRSX_MOUSE (Q8VBZ0) Dehydrogenase/reductase SDR family member on chromosome X| homolog precursor (EC 1.1.-.-) (SCAD family protein) (DHRSXY) (Fragment) Length = 280 Score = 54.7 bits (130), Expect = 6e-08 Identities = 36/70 (51%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAI-YRPTARTPTFTADGHEMSVGVNHLGHF 184 LDLASL SVR F F+ +PL +LV NAA+ P A T DG E +GVN LGHF Sbjct: 101 LDLASLASVRGFARDFQALGLPLHLLVNNAAVMLEPRAE----TEDGFERHLGVNFLGHF 156 Query: 185 LLGRLLMEDL 214 LL LL+ L Sbjct: 157 LLTLLLLPAL 166
>RDH12_MOUSE (Q8BYK4) Retinol dehydrogenase 12 (EC 1.1.1.-)| Length = 316 Score = 52.8 bits (125), Expect = 2e-07 Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHF 184 LDL+ S+R F + F E L +L+ NA + P ++T DG E GVNHLGHF Sbjct: 97 LDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKT----TDGFETHFGVNHLGHF 152 Query: 185 LLGRLLMEDL 214 LL LL+E L Sbjct: 153 LLTYLLLERL 162
>RDH12_BOVIN (P59837) Retinol dehydrogenase 12 (EC 1.1.1.-) (Double substrate| specificity short chain dehydrogenase/reductase 2) Length = 316 Score = 50.8 bits (120), Expect = 9e-07 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHLGHF 184 LDL+ S+R F + F E L +L+ NA + P ++T ADG E + VNHLGHF Sbjct: 97 LDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKT----ADGFETHLAVNHLGHF 152 Query: 185 LLGRLLM 205 LL LL+ Sbjct: 153 LLTHLLL 159
>WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 409 Score = 45.4 bits (106), Expect = 4e-05 Identities = 25/61 (40%), Positives = 38/61 (62%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFL 187 LDL+SL SV++FV+ +++ +D L+ NA ++ A T T DG E + V+HL HF Sbjct: 181 LDLSSLRSVQRFVEEIKQSVSHIDYLILNAGVF---ALPYTRTVDGLETTFQVSHLSHFY 237 Query: 188 L 190 L Sbjct: 238 L 238
>OXIR_STRLI (P35320) Probable oxidoreductase (EC 1.-.-.-)| Length = 297 Score = 43.9 bits (102), Expect = 1e-04 Identities = 28/61 (45%), Positives = 34/61 (55%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFL 187 LDL+ + SV F A+R PLD+LV NA I RT T G EM + N+LGHF Sbjct: 62 LDLSDVASVDSFARAWRG---PLDILVANAGIMALPTRT--LTPYGWEMQLATNYLGHFA 116 Query: 188 L 190 L Sbjct: 117 L 117
>OXIR_STRAT (Q03326) Probable oxidoreductase (EC 1.-.-.-)| Length = 298 Score = 42.7 bits (99), Expect = 3e-04 Identities = 27/61 (44%), Positives = 33/61 (54%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFL 187 LDL+ SV F A+R PLD+LV NA I RT +G EM + N+LGHF Sbjct: 63 LDLSDPASVESFARAWRG---PLDILVANAGIMALPTRT--LAPNGWEMQLATNYLGHFA 117 Query: 188 L 190 L Sbjct: 118 L 118
>YXBG_BACSU (P46331) Hypothetical oxidoreductase yxbG (EC 1.-.-.-)| Length = 273 Score = 33.9 bits (76), Expect = 0.12 Identities = 18/67 (26%), Positives = 34/67 (50%) Frame = +2 Query: 5 HLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHF 184 HLD++ +SV+ F D + A +D+L NA + + + + D + + V+ G F Sbjct: 61 HLDVSDENSVKAFADQIKDACGTIDILFNNAGVDQEGGKVHEYPVDLFDRIIAVDLRGTF 120 Query: 185 LLGRLLM 205 L + L+ Sbjct: 121 LCSKYLI 127
>DHCA_PIG (Q28960) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) (20-beta-hydroxysteroid dehydrogenase) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydroge Length = 288 Score = 29.6 bits (65), Expect = 2.2 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAI 103 LD+ L S+R D R+ LDVLV NAAI Sbjct: 61 LDIIDLQSIRALCDFLRKEYGGLDVLVNNAAI 92
>DHCA_RABIT (P47844) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) Length = 276 Score = 28.9 bits (63), Expect = 3.8 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +2 Query: 8 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAI 103 LD+ L S+R D RRA L+VLV NA I Sbjct: 61 LDITDLQSIRALRDFLRRAYGGLNVLVNNAVI 92
>ROBO1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1) (Deleted in U| twenty twenty) Length = 1651 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = -2 Query: 109 PVDGGVAHQHIQRHLGAAERVNELPDAVEGGEVEVH 2 P GV H+ +QR LG A P + +EVH Sbjct: 659 PTSQGVDHKQVQRELGNAVLHLHNPTVLSSSSIEVH 694
>CYLC1_HUMAN (P35663) Cylicin-1 (Cylicin I) (Multiple-band polypeptide I)| Length = 651 Score = 28.1 bits (61), Expect = 6.5 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%) Frame = +3 Query: 60 APRCRWMCWC-ATPPSTGPRRARRPSPP 140 +P+ R +CWC PP PR A P P Sbjct: 618 SPKVRRLCWCKMPPPPPKPRYAPLPEAP 645
>TAT_HV1EL (P04611) TAT protein (Transactivating regulatory protein)| Length = 99 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -2 Query: 139 GGEGRRARRGPVDGGVAHQ 83 G + RR RRGP GG AHQ Sbjct: 48 GRKKRRQRRGPPQGGQAHQ 66
>DBP8_DEBHA (Q6BGU8) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 441 Score = 27.7 bits (60), Expect = 8.5 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -2 Query: 142 VGGEGRRARRGPVDGGVAHQHIQRHLGAAERVNELPDAVE 23 VG R R+G VA + + R L ER+N+ D +E Sbjct: 341 VGRTARAGRKGDAISIVAEKDVDRILAIEERINKKMDLIE 380 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,723,251 Number of Sequences: 219361 Number of extensions: 301046 Number of successful extensions: 1563 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 1468 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1547 length of database: 80,573,946 effective HSP length: 47 effective length of database: 70,263,979 effective search space used: 1686335496 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
