ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast73b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SBP_ARATH (O23264) Putative selenium-binding protein 105 6e-23
2SBP2_MOUSE (Q63836) Selenium-binding protein 2 (56 kDa acetamino... 99 4e-21
3SBP1_MOUSE (P17563) Selenium-binding protein 1 (56 kDa selenium-... 99 4e-21
4SBP1_HUMAN (Q13228) Selenium-binding protein 1 97 2e-20
5SBP_CAEEL (Q21950) Putative selenium-binding protein 34 0.16
6SM34_LYTPI (Q05904) 34 kDa spicule matrix protein precursor (LSM34) 30 3.1
7SCG1_RAT (O35314) Secretogranin-1 precursor (Secretogranin-I) (S... 30 3.1
8CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1) 29 5.3
9BTBD7_MOUSE (Q8CFE5) BTB/POZ domain-containing protein 7 29 5.3
10WETA_PENCH (Q01870) Regulatory protein wetA 29 5.3
11UL27_HCMVA (P16763) Hypothetical protein UL27 29 6.9
12CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1) 28 9.1
13CINA_GLOVI (Q7NHU4) CinA-like protein 28 9.1
14ENV_MLVFP (P26803) Env polyprotein precursor [Contains: Coat pro... 28 9.1
15DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysi... 28 9.1

>SBP_ARATH (O23264) Putative selenium-binding protein|
          Length = 490

 Score =  105 bits (262), Expect = 6e-23
 Identities = 50/67 (74%), Positives = 54/67 (80%)
 Frame = +2

Query: 269 TPREAMEKGPREGLLYVTCVYNGTGIDKPDYLATVDVDPSSATYSQVIHRLPATHIGDEL 448
           TP  AM  GP E L+YVT VY GTGIDKPDYLATVDVDPSS +YS VIHRLP   +GDEL
Sbjct: 31  TPLAAMS-GPSEKLIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDEL 89

Query: 449 HHSGWNA 469
           HHSGWN+
Sbjct: 90  HHSGWNS 96



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>SBP2_MOUSE (Q63836) Selenium-binding protein 2 (56 kDa acetaminophen-binding|
           protein) (AP56)
          Length = 472

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 45/66 (68%), Positives = 52/66 (78%)
 Frame = +2

Query: 269 TPREAMEKGPREGLLYVTCVYNGTGIDKPDYLATVDVDPSSATYSQVIHRLPATHIGDEL 448
           TP EAM KGPRE ++Y+ C+Y  TG + PDYLATVDVDP S  YSQVIHRLP  ++ DEL
Sbjct: 14  TPLEAM-KGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDEL 72

Query: 449 HHSGWN 466
           HHSGWN
Sbjct: 73  HHSGWN 78



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>SBP1_MOUSE (P17563) Selenium-binding protein 1 (56 kDa selenium-binding|
           protein) (SP56)
          Length = 472

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 45/66 (68%), Positives = 52/66 (78%)
 Frame = +2

Query: 269 TPREAMEKGPREGLLYVTCVYNGTGIDKPDYLATVDVDPSSATYSQVIHRLPATHIGDEL 448
           TP EAM KGPRE ++Y+ C+Y  TG + PDYLATVDVDP S  YSQVIHRLP  ++ DEL
Sbjct: 14  TPLEAM-KGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDEL 72

Query: 449 HHSGWN 466
           HHSGWN
Sbjct: 73  HHSGWN 78



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>SBP1_HUMAN (Q13228) Selenium-binding protein 1|
          Length = 472

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 44/66 (66%), Positives = 51/66 (77%)
 Frame = +2

Query: 269 TPREAMEKGPREGLLYVTCVYNGTGIDKPDYLATVDVDPSSATYSQVIHRLPATHIGDEL 448
           TP EAM KGPRE ++Y+ C+Y  TG + PDYLATVDVDP S  Y QVIHRLP  ++ DEL
Sbjct: 14  TPLEAM-KGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDEL 72

Query: 449 HHSGWN 466
           HHSGWN
Sbjct: 73  HHSGWN 78



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>SBP_CAEEL (Q21950) Putative selenium-binding protein|
          Length = 576

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = +2

Query: 284 MEKGPREGLLYVTCVYNGTGIDKPDYLATVDVDPSSATYSQVIHRLPATHIGDELHHSGW 463
           +E+   + L  + C  +  G ++ D +A VD+DP+S T+  ++  +  T  GDE     W
Sbjct: 83  VEEEQDDELFAIVCCPHSIGYER-DKIALVDLDPTSETFCTILSEVHLTSNGDEPGRMNW 141



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>SM34_LYTPI (Q05904) 34 kDa spicule matrix protein precursor (LSM34)|
          Length = 335

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 361 PGYGGRRPQFSDVLPGDPQAPGHPHRR 441
           PG+GGR+P F    PG  Q PG   R+
Sbjct: 214 PGFGGRQPGFGGQQPGFGQQPGFGGRQ 240



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>SCG1_RAT (O35314) Secretogranin-1 precursor (Secretogranin-I) (SgI)|
           (Chromogranin B) (CgB) (Glucagonoma peptide) [Contains:
           GAWK peptide; CCB peptide]
          Length = 675

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +1

Query: 274 EGGHGEGPARGAPLRHLRLQWHWNRQARLPGYGGRRP 384
           EG  GE  A     +      HW  Q+  P Y GRRP
Sbjct: 261 EGEEGEEGATSEVTKRRPRHHHWRSQSNKPSYEGRRP 297



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>CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1)|
          Length = 1430

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 16/73 (21%)
 Frame = +1

Query: 289 EGPARGAPLRHLRLQWHWN--RQARLPGYGGRRPQF--------------SDVLPGDPQA 420
           EGPA G P + +R   H +  ++A +P   G+  Q               +   PG PQA
Sbjct: 734 EGPAPGTPPKEVRSSRHGHSVKRASVPPVPGKPRQVLPSGVSHFTPPQTPTKAQPGSPQA 793

Query: 421 PGHPHRRRAASLR 459
            G PH    A ++
Sbjct: 794 LGGPHGPATAKVK 806



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>BTBD7_MOUSE (Q8CFE5) BTB/POZ domain-containing protein 7|
          Length = 1130

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
 Frame = +1

Query: 271  AEGGHGEGPARGAPL-----RHLRLQWHWNRQARLPGYGGRRPQFSDVLPGDPQAPGHPH 435
            A G H   PA G         H +   +  +   LPG    + Q        P   GHPH
Sbjct: 955  APGRHSPSPAHGRYFGPDLYSHNKASPNGLKSVYLPGQTSPKKQEDPRREYPPSPDGHPH 1014

Query: 436  RRRAASLRLE 465
            R++   +RL+
Sbjct: 1015 RQKREPIRLD 1024



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>WETA_PENCH (Q01870) Regulatory protein wetA|
          Length = 499

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 6   PSAPLAERKRKTNSSLPPVSQHSTQPGSPLLLSGTVAHRFPSSR 137
           PS P A     T+ S PP +       S L+   ++ HR P+ R
Sbjct: 105 PSRPTASHGLSTSPSTPPATPRRKPTQSALITPKSIRHRSPNER 148



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>UL27_HCMVA (P16763) Hypothetical protein UL27|
          Length = 608

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 325 RLQWHWNRQARLPGYGGRRPQFSDVLPGDPQAPGHPHR-RRAASLRL 462
           RL WH  R    P    R PQFS  L  D +   H +R RR A L L
Sbjct: 524 RLLWHSLRHGDAPQDRTRLPQFSSAL-SDAELSNHANRCRRKAPLEL 569



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>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 16/75 (21%)
 Frame = +1

Query: 289 EGPARGAPLRHLRLQWHWN--RQARLPGYGGRRPQF--------------SDVLPGDPQA 420
           EGPA G P R  R   H +  ++A +P   G+  Q               +   PG PQA
Sbjct: 731 EGPAPGTPPREARPGRHGHSIKRASVPPVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQA 790

Query: 421 PGHPHRRRAASLRLE 465
            G PH    A+ +++
Sbjct: 791 LGGPHGPAPATAKVK 805



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>CINA_GLOVI (Q7NHU4) CinA-like protein|
          Length = 426

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 349 VDSSAIVDAGDVEEPLARALLHGLPRR 269
           VD   ++D G V EP+ARA+  G+  R
Sbjct: 319 VDEQRMIDHGAVSEPVARAMAEGVRNR 345



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>ENV_MLVFP (P26803) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E; R protein]
          Length = 676

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 144 RTPWKKENGEPPCRREAGGSRAGCCADSPE 55
           R P+    G PPC   + G+RAGC  D  E
Sbjct: 95  RAPYSSPPG-PPCCSGSSGNRAGCARDCDE 123



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>DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
            (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
            (H3-K79-HMTase) (DOT1-like protein)
          Length = 1739

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -2

Query: 316  VEEPLARALLHGLPRRGVPGALRRA---APGT 230
            +EEP A A L   PR+G PG+L  A   +PGT
Sbjct: 1279 LEEPSADAKLAAHPRKGFPGSLSGADGLSPGT 1310


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,285,195
Number of Sequences: 219361
Number of extensions: 1239797
Number of successful extensions: 5534
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5523
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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