>HLDE_RHILO (Q98I54) Bifunctional protein hldE [Includes: D-beta-D-heptose|
           7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose
           7-phosphotransferase); D-beta-D-heptose 1-phosphate
           adenosyltransferase (EC 2.7.7.-)]
          Length = 496

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +1

Query: 106 MAPEVKVPLLEGRGATPAQ-TLGNIVVSIV 192
           ++PE  +P+L GRG T A    GN+V +IV
Sbjct: 43  ISPEAPIPVLHGRGETSAMGGAGNVVANIV 72

>DPEP3_HUMAN (Q9H4B8) Dipeptidase 3 precursor (EC 3.4.13.19)|
          Length = 488

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -1

Query: 189 DGHDDVPQRLRGRRAPPLQQRHLHFRRHG--GMDGPTDRLTASQ 64
           DGH+D+PQ LR R    LQ  +L    HG   +D   D L  +Q
Sbjct: 95  DGHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQ 138

>NAC_ECOLI (Q47005) Nitrogen assimilation regulatory protein nac (Nitrogen|
           assimilation control protein)
          Length = 305

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 155 GVAPLPSSSGTFTSGAMEGWMVRQT 81
           GVA LP S+     GA+ GWM R T
Sbjct: 234 GVAVLPESAARSLCGAVNGWMSRIT 258

>IE63_PRVKA (Q85232) Transcriptional regulator IE63 homolog (Protein UL54)|
          Length = 361

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = -1

Query: 168 QRLRGRRAPPLQQRHLHFRRH-----GGMDGPTDRLTASQSPCCSSRSIKLTAT 22
           QR R ++    QQ+H   R+      GG D P DRL+ S     S+   ++ AT
Sbjct: 62  QRRRQQQQQQRQQQHQRRRQEADRPDGGPDAPPDRLSESARAAVSATHARVGAT 115


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,513,673
Number of Sequences: 219361
Number of extensions: 395440
Number of successful extensions: 1244
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 80,573,946
effective HSP length: 41
effective length of database: 71,580,145
effective search space used: 1717923480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)