>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 25/99 (25%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
 Frame = -1

Query: 296 AASLADPEMT*AMRGRDP-ATREAGGVGASLCSTKSAXXXXXXXXXXXXXXVRRTRMKRD 120
           AA    P+     RG  P A   AG    S   +  A                 +     
Sbjct: 548 AAPRRAPDSDSGDRGHGPLAPASAGAAPPSASPSSQAAVAAASSSSASSSSASSSSASSS 607

Query: 119 SAEPTAKGSSHRRSTAAAWTTMGFIGGVGGEQAAADLAG 3
           SA  ++  SS   S++A+ +     GG GG  A+A  AG
Sbjct: 608 SASSSSASSSSASSSSASSSA----GGAGGSVASASGAG 642

>PAX9_PERPO (Q2VL54) Paired box protein Pax-9|
          Length = 341

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 13  SAAACSPPTPPMKPIVVHAAAVDRRW 90
           SAAA   PTPP  P +  + A+ R W
Sbjct: 167 SAAAAKVPTPPGVPAIPGSVAMPRTW 192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,059,443
Number of Sequences: 219361
Number of extensions: 245672
Number of successful extensions: 1360
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)