ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast72h04 |
|---|---|
| Clone Library Name | barley_pub |
>UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) (UMP/CMP kinase) Length = 202 Score = 35.4 bits (80), Expect = 0.039 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = +2 Query: 206 KKVTVVFVLGGPGSGKG 256 KK TV+FVLGGPGSGKG Sbjct: 12 KKPTVIFVLGGPGSGKG 28
>KAD1_RAT (P39069) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 32.3 bits (72), Expect = 0.33 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +2 Query: 206 KKVTVVFVLGGPGSGKG 256 KK ++FV+GGPGSGKG Sbjct: 6 KKAKIIFVVGGPGSGKG 22
>KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 32.3 bits (72), Expect = 0.33 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +2 Query: 206 KKVTVVFVLGGPGSGKG 256 KK ++FV+GGPGSGKG Sbjct: 6 KKAKIIFVVGGPGSGKG 22
>KAD1_MOUSE (Q9R0Y5) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 32.3 bits (72), Expect = 0.33 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +2 Query: 206 KKVTVVFVLGGPGSGKG 256 KK ++FV+GGPGSGKG Sbjct: 6 KKAKIIFVVGGPGSGKG 22
>KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 32.3 bits (72), Expect = 0.33 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +2 Query: 206 KKVTVVFVLGGPGSGKG 256 KK ++FV+GGPGSGKG Sbjct: 6 KKTKIIFVVGGPGSGKG 22
>KAD1_BOVIN (P00570) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 32.3 bits (72), Expect = 0.33 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +2 Query: 206 KKVTVVFVLGGPGSGKG 256 KK ++FV+GGPGSGKG Sbjct: 6 KKAKIIFVVGGPGSGKG 22
>KAD_SCHMA (P25824) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| (AK) Length = 197 Score = 32.0 bits (71), Expect = 0.43 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +2 Query: 209 KVTVVFVLGGPGSGKG 256 K V+FVLGGPGSGKG Sbjct: 8 KAKVIFVLGGPGSGKG 23
>KCY_DICDI (P20425) Cytidylate kinase (EC 2.7.4.14) (Deoxycytidylate kinase)| (UMP-CMP kinase) Length = 194 Score = 32.0 bits (71), Expect = 0.43 Identities = 14/16 (87%), Positives = 14/16 (87%) Frame = +2 Query: 209 KVTVVFVLGGPGSGKG 256 K VVFVLGGPGSGKG Sbjct: 5 KPNVVFVLGGPGSGKG 20
>UMPK_YEAST (P15700) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 204 Score = 31.6 bits (70), Expect = 0.56 Identities = 12/16 (75%), Positives = 16/16 (100%) Frame = +2 Query: 209 KVTVVFVLGGPGSGKG 256 +V+V+FVLGGPG+GKG Sbjct: 15 QVSVIFVLGGPGAGKG 30
>KAD1_PIG (P00571) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 31.6 bits (70), Expect = 0.56 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +2 Query: 206 KKVTVVFVLGGPGSGKG 256 KK ++FV+GGPGSGKG Sbjct: 6 KKSKIIFVVGGPGSGKG 22
>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 198 Score = 30.8 bits (68), Expect = 0.96 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = +2 Query: 206 KKVTVVFVLGGPGSGKG 256 +K ++F++GGPGSGKG Sbjct: 9 RKCKIIFIIGGPGSGKG 25
>KAD_CYPCA (P12115) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 193 Score = 30.4 bits (67), Expect = 1.3 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +2 Query: 206 KKVTVVFVLGGPGSGKG 256 K +VFV+GGPGSGKG Sbjct: 5 KDAKIVFVVGGPGSGKG 21
>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 30.4 bits (67), Expect = 1.3 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +2 Query: 209 KVTVVFVLGGPGSGKG 256 K VVFVLGGPG+GKG Sbjct: 2 KPLVVFVLGGPGAGKG 17
>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 30.4 bits (67), Expect = 1.3 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +2 Query: 209 KVTVVFVLGGPGSGKG 256 K VVFVLGGPG+GKG Sbjct: 2 KPLVVFVLGGPGAGKG 17
>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 193 Score = 30.0 bits (66), Expect = 1.6 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = +2 Query: 206 KKVTVVFVLGGPGSGKG 256 +K ++F++GGPGSGKG Sbjct: 5 RKCKIIFLMGGPGSGKG 21
>BUR1_ASHGO (Q75D46) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 753 Score = 29.6 bits (65), Expect = 2.1 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = -1 Query: 255 PFPLPGPPRTNTTVTFLSPNMFSATTSFSVTAAGASTTVPMAPRRRTGWA 106 P P P P RT T T LS + +AT S A+G++ + P RR+ A Sbjct: 632 PSPAPRPKRTLTNTTQLSSHSSAATG--STAASGSAVSNSSEPVRRSSTA 679
>STP2_PIG (P29258) Nuclear transition protein 2 (TP-2) (TP2)| Length = 137 Score = 29.6 bits (65), Expect = 2.1 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +1 Query: 19 HRSTHHAPSRPVIAAVSPLRRPLHRHSIRSPARPAARSHGH 141 HRS S+ + + SP R HS R P+RP RS H Sbjct: 61 HRSLPGHQSQSLSPSPSPRHRKRAMHSHRCPSRPGTRSCSH 101
>KAPR_USTMA (P49605) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 522 Score = 29.6 bits (65), Expect = 2.1 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +2 Query: 128 GAMGTVVDAPAAVTEKEVVAENMLGDKKVTVVFVLGGPGSGKG 256 G + V +P AV+E A +LGDKKV+ GPGS G Sbjct: 256 GTLDVYVRSPDAVSEGAPSASALLGDKKVSY-----GPGSSFG 293
>KCY_PIG (Q29561) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/13 (92%), Positives = 13/13 (100%) Frame = +2 Query: 218 VVFVLGGPGSGKG 256 VVFVLGGPG+GKG Sbjct: 5 VVFVLGGPGAGKG 17
>KAD_PRUAR (O24464) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 231 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +2 Query: 218 VVFVLGGPGSGKG 256 V FVLGGPGSGKG Sbjct: 49 VTFVLGGPGSGKG 61
>UMPK_SCHPO (O59771) Probable uridylate kinase (EC 2.7.4.-) (UK) (Uridine| monophosphate kinase) (UMP kinase) Length = 191 Score = 29.3 bits (64), Expect = 2.8 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = +2 Query: 218 VVFVLGGPGSGKG 256 V+FVLGGPG+GKG Sbjct: 4 VIFVLGGPGAGKG 16
>ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein 2 (Fragment)| Length = 1168 Score = 29.3 bits (64), Expect = 2.8 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = -1 Query: 252 FPLPGPPRTNTTVTFLSPNMFSATTSFSVTAAG----ASTTVPMAPRRRTGWAPNRMP 91 FP PG P+ + + + + +A TS + G ST P P G AP+ P Sbjct: 909 FPFPGSPQAASALPTQNSSALNAATSAQPASTGISPSQSTVPPAVPTHTPGPAPSPSP 966
>KAD1_CHICK (P05081) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = +2 Query: 218 VVFVLGGPGSGKG 256 ++FV+GGPGSGKG Sbjct: 11 IIFVVGGPGSGKG 23
>LARP1_MOUSE (Q6ZQ58) La-related protein 1 (La ribonucleoprotein domain family| member 1) (Fragment) Length = 364 Score = 28.1 bits (61), Expect = 6.2 Identities = 16/47 (34%), Positives = 17/47 (36%) Frame = -1 Query: 243 PGPPRTNTTVTFLSPNMFSATTSFSVTAAGASTTVPMAPRRRTGWAP 103 PGPPR T N S A TTVP +P R P Sbjct: 6 PGPPRFQQVPTDALANKLFGAPEPSTIARSLPTTVPESPNYRNARTP 52
>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)| (ATP-AMP transphosphorylase) Length = 210 Score = 28.1 bits (61), Expect = 6.2 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +2 Query: 212 VTVVFVLGGPGSGKG 256 V + F++GGPGSGKG Sbjct: 20 VPIFFIVGGPGSGKG 34
>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 704 Score = 27.7 bits (60), Expect = 8.1 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 Query: 1 TNTTDHHRSTHHAPSRPVIAAVSPLRRPLHRHSIRSPARPAARS 132 ++++D S AP++PV A SPL +P +P PAA++ Sbjct: 373 SDSSDSDSSEDEAPAKPVSATKSPLSKP-----AVTPKPPAAKA 411 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,388,678 Number of Sequences: 219361 Number of extensions: 533478 Number of successful extensions: 2490 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2401 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2485 length of database: 80,573,946 effective HSP length: 61 effective length of database: 67,192,925 effective search space used: 1612630200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
