ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast72e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHT18_ARATH (Q9SYQ1) Inorganic phosphate transporter 1-8 (AtPht1... 102 4e-22
2PHT14_ARATH (Q96303) Inorganic phosphate transporter 1-4 (AtPht1... 93 2e-19
3PHT19_ARATH (Q9S735) Inorganic phosphate transporter 1-9 (AtPht1... 93 3e-19
4PHT17_ARATH (Q494P0) Inorganic phosphate transporter 1-7 (AtPht1... 92 5e-19
5PHT12_ARATH (Q96243) Inorganic phosphate transporter 1-2 (AtPht1... 92 7e-19
6PHT11_ARATH (Q8VYM2) Inorganic phosphate transporter 1-1 (AtPht1... 91 9e-19
7PHT13_ARATH (O48639) Inorganic phosphate transporter 1-3 (AtPht1... 91 1e-18
8PHT15_ARATH (Q8GYF4) Inorganic phosphate transporter 1-5 (AtPht1... 87 2e-17
9PHT16_ARATH (Q9ZWT3) Inorganic phosphate transporter 1-6 (AtPht1... 83 2e-16
10PHO84_YEAST (P25297) Inorganic phosphate transporter PHO84 42 6e-04
11YHD1_SCHPO (Q9P6J9) Putative inorganic phosphate transporter C16... 36 0.045
12YBN1_SCHPO (O42885) Putative inorganic phosphate transporter C8E... 36 0.045
13YAEC_SCHPO (Q09852) Putative inorganic phosphate transporter C23... 33 0.29
14TGIF_PANTR (Q5IS58) 5'-TG-3'-interacting factor (Homeobox protei... 32 0.65
15TGIF_HUMAN (Q15583) 5'-TG-3'-interacting factor (Homeobox protei... 32 0.85
16POL_HTL1A (P03362) Pol polyprotein [Contains: Reverse transcript... 30 2.5
17POL_HTL1C (P14078) Pol polyprotein [Contains: Reverse transcript... 30 3.2
18PUCB_BACSU (O32146) Purine catabolism protein pucB 28 9.4

>PHT18_ARATH (Q9SYQ1) Inorganic phosphate transporter 1-8 (AtPht1;8) (H(+)/Pi|
           cotransporter)
          Length = 534

 Score =  102 bits (254), Expect = 4e-22
 Identities = 53/110 (48%), Positives = 66/110 (60%)
 Frame = +1

Query: 103 PIRVLTALDHARTQYYHFKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRP 282
           PI+VL++LD ARTQ+YHFKAII+AGMGLFTD+YDLFCI PVMK+I  VYY   + +    
Sbjct: 2   PIKVLSSLDVARTQWYHFKAIIVAGMGLFTDAYDLFCIAPVMKMISHVYYNGDSINT--- 58

Query: 283 GVTPPXXXXXXXXXXXXXXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
                                         DRVGRRRVYG CL++++ SS
Sbjct: 59  -----AVLSTSYAIALLGTATGQLVFGYLGDRVGRRRVYGLCLIIMILSS 103



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>PHT14_ARATH (Q96303) Inorganic phosphate transporter 1-4 (AtPht1;4) (H(+)/Pi|
           cotransporter)
          Length = 534

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 48/109 (44%), Positives = 64/109 (58%)
 Frame = +1

Query: 106 IRVLTALDHARTQYYHFKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPG 285
           ++VL ALD A+TQ+YHF AIIIAGMG FTD+YDLFCI  V K++GR+YY      A +PG
Sbjct: 6   LQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVEG--AQKPG 63

Query: 286 VTPPXXXXXXXXXXXXXXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
             PP                         D++GR++VYG  L+++V  S
Sbjct: 64  TLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMVMVLCS 112



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>PHT19_ARATH (Q9S735) Inorganic phosphate transporter 1-9 (AtPht1;9) (H(+)/Pi|
           cotransporter)
          Length = 532

 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 51/112 (45%), Positives = 64/112 (57%)
 Frame = +1

Query: 97  MAPIRVLTALDHARTQYYHFKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAG 276
           M  + +L+ALD AR Q+YHFKAII+AGMGLFTD+YDLFCI P+MK+I ++YY     H  
Sbjct: 1   MPELSLLSALDAARIQWYHFKAIIVAGMGLFTDAYDLFCIAPIMKMISQIYY-----HKD 55

Query: 277 RPGVTPPXXXXXXXXXXXXXXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
             G                             DRVGRR+VYG  LL++V SS
Sbjct: 56  SIGTA---LLSTSYAIALLGTALGQLIFGYLGDRVGRRKVYGLSLLIMVFSS 104



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>PHT17_ARATH (Q494P0) Inorganic phosphate transporter 1-7 (AtPht1;7) (H(+)/Pi|
           cotransporter)
          Length = 535

 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 47/109 (43%), Positives = 62/109 (56%)
 Frame = +1

Query: 106 IRVLTALDHARTQYYHFKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPG 285
           + VL ALD A+TQ+YHF AIIIAGMG FTD+YDLFCI  V K++GR+YY        +PG
Sbjct: 6   LNVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGSE--KPG 63

Query: 286 VTPPXXXXXXXXXXXXXXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
             PP                         D++GR++VYG  L+++V  S
Sbjct: 64  TLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMVMVLCS 112



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>PHT12_ARATH (Q96243) Inorganic phosphate transporter 1-2 (AtPht1;2) (H(+)/Pi|
           cotransporter)
          Length = 524

 Score = 91.7 bits (226), Expect = 7e-19
 Identities = 45/107 (42%), Positives = 63/107 (58%)
 Frame = +1

Query: 112 VLTALDHARTQYYHFKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPGVT 291
           VL ALD A+TQ YHF AI+IAGMG FTD+YDLFC+  V K++GR+YY +P   + +PG  
Sbjct: 8   VLKALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYFNP--ESAKPGSL 65

Query: 292 PPXXXXXXXXXXXXXXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
           PP                         D++GR++VYG  L++++  S
Sbjct: 66  PPHVAAAVNGVALCGTLSGQLFFGWLGDKLGRKKVYGLTLIMMILCS 112



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>PHT11_ARATH (Q8VYM2) Inorganic phosphate transporter 1-1 (AtPht1;1) (H(+)/Pi|
           cotransporter)
          Length = 524

 Score = 91.3 bits (225), Expect = 9e-19
 Identities = 45/107 (42%), Positives = 63/107 (58%)
 Frame = +1

Query: 112 VLTALDHARTQYYHFKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPGVT 291
           VL ALD A+TQ YHF AI+IAGMG FTD+YDLFC+  V K++GR+YY +P   + +PG  
Sbjct: 8   VLKALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYFNP--ESAKPGSL 65

Query: 292 PPXXXXXXXXXXXXXXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
           PP                         D++GR++VYG  L++++  S
Sbjct: 66  PPHVAAAVNGVALCGTLSGQLFFGWLGDKLGRKKVYGLTLVMMILCS 112



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>PHT13_ARATH (O48639) Inorganic phosphate transporter 1-3 (AtPht1;3) (H(+)/Pi|
           cotransporter)
          Length = 521

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 45/107 (42%), Positives = 63/107 (58%)
 Frame = +1

Query: 112 VLTALDHARTQYYHFKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPGVT 291
           VL ALD A+TQ YHF AI+IAGMG FTD+YDLFC+  V K++GR+YY +P   + +PG  
Sbjct: 8   VLKALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRLYYFNPT--SAKPGSL 65

Query: 292 PPXXXXXXXXXXXXXXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
           PP                         D++GR++VYG  L++++  S
Sbjct: 66  PPHVAAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLIMMILCS 112



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>PHT15_ARATH (Q8GYF4) Inorganic phosphate transporter 1-5 (AtPht1;5) (H(+)/Pi|
           cotransporter)
          Length = 542

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 46/107 (42%), Positives = 60/107 (56%)
 Frame = +1

Query: 112 VLTALDHARTQYYHFKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPGVT 291
           VL ALD A+TQ YHF AI+IAGMG FTD+YDLF I  V K++GR+YY      + +PG  
Sbjct: 8   VLNALDAAKTQMYHFTAIVIAGMGFFTDAYDLFSISLVTKLLGRIYY--HVDSSKKPGTL 65

Query: 292 PPXXXXXXXXXXXXXXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
           PP                         D++GR++VYG  L+L+V  S
Sbjct: 66  PPNVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGITLMLMVLCS 112



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>PHT16_ARATH (Q9ZWT3) Inorganic phosphate transporter 1-6 (AtPht1;6) (H(+)/Pi|
           cotransporter)
          Length = 516

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = +1

Query: 112 VLTALDHARTQYYHFKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPGVT 291
           +L ALD A+TQ+YH  A++++GMG FTDSYDLF I  + K++GR+YY  P   +  PG  
Sbjct: 9   ILKALDVAKTQWYHVTAVVVSGMGFFTDSYDLFVISLITKLLGRIYYQVPG--SSSPGSL 66

Query: 292 PPXXXXXXXXXXXXXXXXXXXXXXXXXDRVGRRRVYGPCLLLL-VCS 429
           P                          D++GR+RVYG  LL++ +CS
Sbjct: 67  PDGISAAVSGVAFAGTFIGQIFFGCLGDKLGRKRVYGLTLLIMTICS 113



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>PHO84_YEAST (P25297) Inorganic phosphate transporter PHO84|
          Length = 587

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
 Frame = +1

Query: 115 LTALDHARTQYYHFKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPGVTP 294
           L ++D     +   K I IAG+G  TDSYD+F I   + ++  VY+     H   PG + 
Sbjct: 50  LESIDDEGFGWQQVKTISIAGVGFLTDSYDIFAINLGITMMSYVYW-----HGSMPGPS- 103

Query: 295 PXXXXXXXXXXXXXXXXXXXXXXXXXDRVGRRRVYG-PCLLLLVCS 429
                                     D VGR+R+YG   ++++VC+
Sbjct: 104 ---QTLLKVSTSVGTVIGQFGFGTLADIVGRKRIYGMELIIMIVCT 146



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>YHD1_SCHPO (Q9P6J9) Putative inorganic phosphate transporter C1683.01|
          Length = 573

 Score = 35.8 bits (81), Expect = 0.045
 Identities = 23/93 (24%), Positives = 38/93 (40%)
 Frame = +1

Query: 154 FKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPGVTPPXXXXXXXXXXXX 333
           F+ +++AG+G F DSYDLF I  V  I   +Y+          G  P             
Sbjct: 45  FRLMMLAGVGFFLDSYDLFIINLVTPIFEYLYWGGIEKGPNGKGHYPSGIRGLVNAASNI 104

Query: 334 XXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
                        D  GR+ VYG  +++++ ++
Sbjct: 105 GNIFGQLMFGFMGDFFGRKFVYGKEMIIVIIAT 137



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>YBN1_SCHPO (O42885) Putative inorganic phosphate transporter C8E4.01c|
          Length = 572

 Score = 35.8 bits (81), Expect = 0.045
 Identities = 24/93 (25%), Positives = 38/93 (40%)
 Frame = +1

Query: 154 FKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPGVTPPXXXXXXXXXXXX 333
           FK +++AG+G F DSYDLF I  V  I   +Y+          G  P             
Sbjct: 45  FKLMMLAGVGFFLDSYDLFIINLVTPIFEYLYWGGIEKGPTGKGHYPSGIRGLVNASANI 104

Query: 334 XXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
                        D  GR+ VYG  +++++ ++
Sbjct: 105 GNIFGQLLFGFMGDFFGRKFVYGKEMVIVIIAT 137



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>YAEC_SCHPO (Q09852) Putative inorganic phosphate transporter C23D3.12|
          Length = 559

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 25/93 (26%), Positives = 37/93 (39%)
 Frame = +1

Query: 154 FKAIIIAGMGLFTDSYDLFCIVPVMKIIGRVYYPSPAGHAGRPGVTPPXXXXXXXXXXXX 333
           FK +  AG G F DSYDLF I  V  I   +Y+    G  G+    P             
Sbjct: 43  FKLMGFAGAGFFLDSYDLFIINLVSPIYEYLYW---GGLEGKKPHYPSGIHGLVNAAANI 99

Query: 334 XXXXXXXXXXXXXDRVGRRRVYGPCLLLLVCSS 432
                        D  GR+ VYG  +++++ ++
Sbjct: 100 GNVFGQILFGFMGDFFGRKFVYGKEMIVVIIAT 132



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>TGIF_PANTR (Q5IS58) 5'-TG-3'-interacting factor (Homeobox protein TGIF)|
          Length = 401

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 13/48 (27%)
 Frame = +1

Query: 13  PQVPIFCPRLRALAPSTD--------HRWQLPRRP-----GMAPIRVL 117
           P  P  CP+ RAL+P           HRW+LPR P     G AP R L
Sbjct: 82  PPPPARCPQPRALSPELGTKAGPRRPHRWELPRSPSQGAQGPAPRRRL 129



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>TGIF_HUMAN (Q15583) 5'-TG-3'-interacting factor (Homeobox protein TGIF)|
          Length = 401

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 13/48 (27%)
 Frame = +1

Query: 13  PQVPIFCPRLRALA--------PSTDHRWQLPRRP-----GMAPIRVL 117
           P  P  CP+ RAL+        P   HRW+LPR P     G AP R L
Sbjct: 82  PPPPARCPQPRALSQELGTKAGPRRPHRWELPRSPSQGAQGPAPRRRL 129



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>POL_HTL1A (P03362) Pol polyprotein [Contains: Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 896

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 70  RWQLPRRPGMAPIRVLTALDHARTQYYHFK 159
           RWQL   P + PI    +L + +T +Y+FK
Sbjct: 803 RWQLHHSPRLQPIPETRSLSNKQTHWYYFK 832



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>POL_HTL1C (P14078) Pol polyprotein [Contains: Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 896

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 70  RWQLPRRPGMAPIRVLTALDHARTQYYHFK 159
           RWQL   P + PI    +L + +T +Y+FK
Sbjct: 803 RWQLHHSPRLQPIPETHSLSNKQTHWYYFK 832



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>PUCB_BACSU (O32146) Purine catabolism protein pucB|
          Length = 197

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 132 VVQRREHAYRRHSGPPRQLPPMIGRWS 52
           VV+R EHA     G P   PP   RWS
Sbjct: 51  VVERTEHASLEWIGAPYHAPPFQKRWS 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,571,414
Number of Sequences: 219361
Number of extensions: 736402
Number of successful extensions: 2358
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2341
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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