| Clone Name | bast72d12 |
|---|---|
| Clone Library Name | barley_pub |
>PIP11_ORYSA (Q6EU94) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1) Length = 289 Score = 43.5 bits (101), Expect = 2e-04 Identities = 19/20 (95%), Positives = 20/20 (100%) Frame = +1 Query: 88 MEGKEEDVRLGANKYSERQP 147 MEGKEEDVRLGAN+YSERQP Sbjct: 1 MEGKEEDVRLGANRYSERQP 20
>PIP13_ORYSA (Q9SXF8) Aquaporin PIP 1.3 (Plasma membrane intrinsic protein 1.3)| (OsPIP1.3) (Water channel protein RWC3) (RWC-3) Length = 288 Score = 42.4 bits (98), Expect = 4e-04 Identities = 18/20 (90%), Positives = 20/20 (100%) Frame = +1 Query: 88 MEGKEEDVRLGANKYSERQP 147 MEGKEEDVRLGAN+Y+ERQP Sbjct: 1 MEGKEEDVRLGANRYTERQP 20
>PIP14_ARATH (Q39196) Probable aquaporin PIP1.4 (Plasma membrane intrinsic| protein 1.4) (Transmembrane protein C) (TMP-C) Length = 287 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 88 MEGKEEDVRLGANKYSERQP 147 MEGKEEDVR+GANK+ ERQP Sbjct: 1 MEGKEEDVRVGANKFPERQP 20
>PIP13_ARATH (Q08733) Aquaporin PIP1.3 (Plasma membrane intrinsic protein 1c)| (PIP1c) (Transmembrane protein B) (TMP-B) Length = 286 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 88 MEGKEEDVRLGANKYSERQP 147 MEGKEEDVR+GANK+ ERQP Sbjct: 1 MEGKEEDVRVGANKFPERQP 20
>PIP12_ARATH (Q06611) Aquaporin PIP1.2 (Plasma membrane intrinsic protein 1b)| (PIP1b) (Transmembrane protein A) (TMP-A) (AthH2) Length = 286 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 88 MEGKEEDVRLGANKYSERQP 147 MEGKEEDVR+GANK+ ERQP Sbjct: 1 MEGKEEDVRVGANKFPERQP 20
>PIP11_VICFA (P61838) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) Length = 286 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 88 MEGKEEDVRLGANKYSERQP 147 MEGKEEDVR+GANK+ ERQP Sbjct: 1 MEGKEEDVRVGANKFPERQP 20
>PIP11_ARATH (P61837) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) Length = 286 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 88 MEGKEEDVRLGANKYSERQP 147 MEGKEEDVR+GANK+ ERQP Sbjct: 1 MEGKEEDVRVGANKFPERQP 20
>PIP15_ARATH (Q8LAA6) Probable aquaporin PIP1.5 (Plasma membrane intrinsic| protein 1d) (PIP1d) Length = 287 Score = 38.1 bits (87), Expect = 0.007 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = +1 Query: 88 MEGKEEDVRLGANKYSERQP 147 MEGKEEDV +GANK+ ERQP Sbjct: 1 MEGKEEDVNVGANKFPERQP 20
>PIP2_PEA (P25794) Probable aquaporin PIP-type 7a (Turgor-responsive protein| 7a) (Turgor-responsive protein 31) Length = 289 Score = 35.4 bits (80), Expect = 0.043 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = +1 Query: 88 MEGKEEDVRLGANKYSERQP 147 ME KE+DV LGANK+ ERQP Sbjct: 1 MEAKEQDVSLGANKFPERQP 20
>PIP1_LYCES (Q08451) Probable aquaporin PIP-type pTOM75 (Ripening-associated| membrane protein) (RAMP) Length = 286 Score = 33.5 bits (75), Expect = 0.17 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +1 Query: 91 EGKEEDVRLGANKYSERQP 147 E KEEDV+LGANK+ E QP Sbjct: 3 ENKEEDVKLGANKFRETQP 21
>PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3, chloroplast| precursor Length = 374 Score = 27.7 bits (60), Expect = 9.1 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +1 Query: 1 PHAHTKAAHLVPFQLRRASDHRPPARAAAMEGKEED 108 P H+ PF+L S RPP AAA G ++ Sbjct: 21 PTIHSSTGSRRPFRLPLRSSRRPPVAAAAASGVPDE 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.128 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,025,643 Number of Sequences: 219361 Number of extensions: 260902 Number of successful extensions: 813 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 807 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 813 length of database: 80,573,946 effective HSP length: 25 effective length of database: 75,089,921 effective search space used: 1802158104 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)