| Clone Name | bast72d09 |
|---|---|
| Clone Library Name | barley_pub |
>NLTP2_TOBAC (Q03461) Nonspecific lipid-transfer protein 2 precursor (LTP 2)| Length = 114 Score = 38.1 bits (87), Expect = 0.009 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = +2 Query: 230 GLADCLDYVLPGSKSAKPSKTCCGEVKTAVGTPATVK-----CLCEAMAAKETPIPINMT 394 GLA CL Y+ + P +CCG VK +G ++ C C AA I+M Sbjct: 33 GLAPCLPYL----QGRGPLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIK-GIDMG 87 Query: 395 RVLALPGACG 424 + LPGACG Sbjct: 88 KAAGLPGACG 97
>NLTP3_HORVU (Q43766) Nonspecific lipid-transfer protein 3 precursor (LTP 3)| (CW20) (CW-20) (CW-19) Length = 118 Score = 37.0 bits (84), Expect = 0.019 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCGEVKTAVG---TPATVKCLCEAMAAKETPIP-INMTRV 400 L+ C+ Y AKP CC VK G + A + C + + T I INM +V Sbjct: 36 LSPCISYAR--GNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKV 93 Query: 401 LALPGACG 424 +PG CG Sbjct: 94 SGVPGKCG 101
>NLTP1_PRUDO (P82534) Nonspecific lipid-transfer protein 1 (LTP 1) (Major| allergen Pru d 3) Length = 91 Score = 33.1 bits (74), Expect = 0.28 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCG--EVKTAVGTPATVKCLCEAMAAKETPIP-INMTRVL 403 LA C++YV G A P C G V T A + C + IP +N Sbjct: 10 LAPCINYVKGGG--AVPPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAA 67 Query: 404 ALPGACG 424 ALPG CG Sbjct: 68 ALPGKCG 74
>M7_LILHE (Q40190) M7 protein precursor (LHM7)| Length = 89 Score = 32.0 bits (71), Expect = 0.62 Identities = 18/42 (42%), Positives = 21/42 (50%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCGEVKTAVGTPATVKCLCEAM 358 L C YVLPGS A PS+ CC +K CLCE + Sbjct: 35 LMTCGPYVLPGSNGA-PSEQCCSALKA-----VNHGCLCETI 70
>VAX2_MOUSE (Q9WTP9) Ventral anterior homeobox 2 (Ventral retina homeodomain| protein) Length = 292 Score = 31.6 bits (70), Expect = 0.81 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Frame = +1 Query: 301 GGEDRRRHPRHRQVPLRSHGRQGD---AHTDQHDTGARSPRRL 420 GG +R R P+ R+ P GR G+ A + DTG+ SPR + Sbjct: 4 GGAERDRGPKRREEPGGRSGRHGEHRGAEDLRADTGSASPREI 46
>NLTP_PRUAV (Q9M5X8) Nonspecific lipid-transfer protein precursor (LTP)| (Allergen Pru av 3) Length = 117 Score = 31.6 bits (70), Expect = 0.81 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCG--EVKTAVGTPATVKCLCEAMAAKETPIP-INMTRVL 403 LA C+ YV G A P C G + T A + C + +P +N Sbjct: 36 LAPCIAYVRGGG--AVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAA 93 Query: 404 ALPGACG 424 ALPG CG Sbjct: 94 ALPGKCG 100
>CS029_MOUSE (Q9CS00) Protein C19orf29 homolog| Length = 772 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +1 Query: 298 RGGEDRRRHPRHRQVPLRSHGRQGDAHTDQHDTGARSPRRLR 423 R RR H R R+ RS GR+ D+ +Q R + LR Sbjct: 57 RSSRRRREHERRRERKRRSRGRRSDSEGEQRQKSRRRSQSLR 98
>LIM3_LILLO (Q40227) LIM3 protein precursor| Length = 90 Score = 31.2 bits (69), Expect = 1.1 Identities = 22/64 (34%), Positives = 29/64 (45%) Frame = +2 Query: 230 GLADCLDYVLPGSKSAKPSKTCCGEVKTAVGTPATVKCLCEAMAAKETPIPINMTRVLAL 409 GL C YVLPG++ PS CC ++ CLCE IN+ + +L Sbjct: 34 GLMSCGPYVLPGNQ-LTPSTQCCSAIQA-----VNHGCLCET---------INI--ISSL 76 Query: 410 PGAC 421 PG C Sbjct: 77 PGHC 80
>NEUR_DROME (P29503) Protein neuralized| Length = 754 Score = 30.8 bits (68), Expect = 1.4 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +3 Query: 21 PSPVRQTPEPARSRSSAQQAHHPEQ 95 P+ +Q P+PA + SSA +HHP Q Sbjct: 278 PAQQQQMPQPAANASSALNSHHPHQ 302
>NLTPC_RICCO (P10975) Nonspecific lipid-transfer protein C, cotyledon-specific| isoform precursor (NS-LTP C) (Phospholipid transfer protein) (PLTP) Length = 116 Score = 30.8 bits (68), Expect = 1.4 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Frame = +2 Query: 269 KSAKPSKTCCGEVKTAVGTPATV---KCLCEAMAAKETPIPINMTRVLALPGAC 421 K +KPS+ CC ++ T TV K +C + A + I + +P AC Sbjct: 45 KDSKPSQACCTGLQQLAQTVKTVDDKKAICRCLKASSKSLGIKDQFLSKIPAAC 98
>NLTP1_PRUDU (Q43017) Nonspecific lipid-transfer protein 1 precursor (LTP 1)| Length = 117 Score = 30.4 bits (67), Expect = 1.8 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCG--EVKTAVGTPATVKCLCEAMAAKETPIP-INMTRVL 403 LA C+ YV G A P C G V T + C + +P +N Sbjct: 36 LAPCIPYVRGGG--AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAA 93 Query: 404 ALPGACG 424 ALPG CG Sbjct: 94 ALPGKCG 100
>NLTP2_ARATH (Q9S7I3) Nonspecific lipid-transfer protein 2 precursor (LTP 2)| Length = 118 Score = 30.4 bits (67), Expect = 1.8 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCGEVKTAVGTPATVK-----CLCEAMAAKETPIPINMTR 397 LA C+ Y+ G A ++ CC V +T C C AAK +N R Sbjct: 36 LAGCIAYLTRG---APLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTAR 92 Query: 398 VLALPGAC 421 LP AC Sbjct: 93 AAGLPSAC 100
>NLTP1_ARATH (Q42589) Nonspecific lipid-transfer protein 1 precursor (LTP 1)| Length = 118 Score = 30.4 bits (67), Expect = 1.8 Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 5/69 (7%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCGEVKTAVGTPATVK-----CLCEAMAAKETPIPINMTR 397 LA C+ YVL G CC VK T C C AA+ +N R Sbjct: 36 LAACIGYVLQGGVIPP---ACCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGR 92 Query: 398 VLALPGACG 424 +P ACG Sbjct: 93 AAGIPKACG 101
>NLTP1_PRUPE (P81402) Nonspecific lipid-transfer protein 1 (LTP 1) (Major| allergen Pru p 3) (Pru p 1) Length = 91 Score = 30.4 bits (67), Expect = 1.8 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCG--EVKTAVGTPATVKCLCEAMAAKETPIP-INMTRVL 403 LA C+ YV G A P C G V T + C + +P +N Sbjct: 10 LAPCIPYVRGGG--AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAA 67 Query: 404 ALPGACG 424 ALPG CG Sbjct: 68 ALPGKCG 74
>RB15B_MOUSE (Q6PHZ5) Putative RNA-binding protein 15B (RNA-binding motif| protein 15B) Length = 564 Score = 30.0 bits (66), Expect = 2.4 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = +1 Query: 301 GGEDRRRHPRHRQVPLRSHGRQGDAHTDQHDTGARSPRRL 420 G E+R H H + P SHG++ H T P+ L Sbjct: 333 GAEERSHHHHHHEAPDSSHGKKTRESERNHRTTEAEPKTL 372
>MEN8_SILLA (O24356) MEN-8 protein precursor| Length = 100 Score = 30.0 bits (66), Expect = 2.4 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +2 Query: 242 CLDYVLPGSKSAKPSKTCCGEVKTAVGTPATVKCLCEAM-AAKETPIPINM 391 C YV+PG+ + PS+ CC A + C+C + A + P N+ Sbjct: 48 CAPYVVPGAVNTNPSQECC-----AALSGVNHDCMCNTLRVASQLPSSCNL 93
>A9_BRANA (Q05772) Tapetum-specific protein A9 precursor| Length = 96 Score = 30.0 bits (66), Expect = 2.4 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +2 Query: 242 CLDYVLPGSKSAKPSKTCCGEVKTAVGTPATVK-CLCEAMAAKET 373 C VLPG+ + P+ CC + AT K C+C A+ A T Sbjct: 42 CAPLVLPGAVNPAPNSNCC------IALQATNKDCICNALRAATT 80
>MC1_PINRA (O24493) Male-cone protein 1 precursor (PRMC1)| Length = 92 Score = 29.6 bits (65), Expect = 3.1 Identities = 20/63 (31%), Positives = 28/63 (44%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCGEVKTAVGTPATVKCLCEAMAAKETPIPINMTRVLALP 412 LA C V S KPS CC +K GT + C+C+++ A V++LP Sbjct: 35 LAPCTSAVGLSSNGVKPSSECCDALK---GT--STSCVCKSVRA-----------VISLP 78 Query: 413 GAC 421 C Sbjct: 79 AKC 81
>LIM2_LILLO (Q43534) LIM2 protein precursor| Length = 90 Score = 29.6 bits (65), Expect = 3.1 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCGEVKTAVGTPATVKCLCEAM 358 L C YVLPG+ A PS+ CC ++ CLCE + Sbjct: 36 LMTCGPYVLPGNNGA-PSEQCCSALRA-----VNHGCLCETI 71
>LIM1_LILLO (Q43533) LIM1 protein precursor| Length = 90 Score = 29.6 bits (65), Expect = 3.1 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCGEVKTAVGTPATVKCLCEAM 358 L C YVLPG+ A PS+ CC ++ CLCE + Sbjct: 36 LMTCGPYVLPGNNGA-PSEQCCSALRA-----VNHGCLCETI 71
>NLTP2_GOSHI (Q43129) Nonspecific lipid-transfer protein precursor (LTP) (GH3)| Length = 120 Score = 29.3 bits (64), Expect = 4.0 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCG--EVKTAVGTPATVKCLCEAMAAKETPIP-INMTRVL 403 LA C++Y+ A P C G + +A T + C + + I IN Sbjct: 37 LAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLAS 96 Query: 404 ALPGACG 424 LPG CG Sbjct: 97 GLPGKCG 103
>NLTP1_GOSHI (Q42762) Nonspecific lipid-transfer protein precursor (LTP)| Length = 116 Score = 29.3 bits (64), Expect = 4.0 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCG--EVKTAVGTPATVKCLCEAMAAKETPIP-INMTRVL 403 LA C++Y+ A P C G + +A T + C + + I IN Sbjct: 33 LAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLAS 92 Query: 404 ALPGACG 424 LPG CG Sbjct: 93 GLPGKCG 99
>DNM3B_HUMAN (Q9UBC3) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)| (Dnmt3b) (DNA methyltransferase HsaIIIB) (DNA MTase HsaIIIB) (M.HsaIIIB) Length = 853 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +1 Query: 328 RHRQVPLRSHGRQGDAHTDQHDTGARSPRRLRR 426 RHR P + GRQG H D+ + R LRR Sbjct: 116 RHRPSPRSTRGRQGRNHVDESPVEFPATRSLRR 148
>UVRB_HAEIN (P45125) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 679 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = -2 Query: 423 PQAPGRASTRVMLIGMGVSLAAMASQRHLTVAGVPTAVFTSPQQVLE 283 PQA + ++ IG G + A A+++ +A PTA++ +P+ E Sbjct: 591 PQALNKKVGELLDIGQGANQKAKANKQRGKMAAEPTALYNAPKNAKE 637
>UVRB_HAEI8 (Q4QJX4) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 679 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = -2 Query: 423 PQAPGRASTRVMLIGMGVSLAAMASQRHLTVAGVPTAVFTSPQQVLE 283 PQA + ++ IG G + A A+++ +A PTA++ +P+ E Sbjct: 591 PQALNKKVGELLDIGQGANQKAKANKQRGKMAAEPTALYNAPKNAKE 637
>NLTPD_RICCO (Q43119) Nonspecific lipid-transfer protein D, cotyledon-specific| isoform precursor (NS-LTP D) Length = 116 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Frame = +2 Query: 269 KSAKPSKTCCGEVKTAVGTPATV---KCLCEAMAAKETPIPINMTRVLALPGAC 421 K +KPS CC ++ T +V K +C + A + I + +P AC Sbjct: 45 KDSKPSSACCTGLQQLAQTVKSVDDKKAICRCLKASSKSLGIKDQFLSKIPAAC 98
>M6_LILHE (Q40189) M6 protein (LHM6) (Fragment)| Length = 78 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +2 Query: 251 YVLPGSKSAKPSKTCCGEVKTAVGTPATVKCLCEAM 358 +VLPG+ PS CC + +AV T CLCE + Sbjct: 1 FVLPGNNLVTPSAECCSSL-SAVNT----GCLCETI 31
>ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog| Length = 332 Score = 28.5 bits (62), Expect = 6.9 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 3 PRIPSRPSPVRQTPEPARSRSSAQQAHHPEQP 98 P++ S P PV P+P AQQA P +P Sbjct: 148 PQVASAPQPVHSAPQP------AQQAFQPAEP 173
>NLT41_HORVU (Q43767) Nonspecific lipid-transfer protein 4.1 precursor (LTP 4.1)| (CW21) (CW-21) Length = 115 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCGEVKTAVG---TPATVKCLCEAMAAKETPIPINMTRVL 403 L+ C+ Y AKP CC VK G + A + C+ + K +N + Sbjct: 36 LSPCISYAR--GNGAKPPAACCSGVKRLAGAAQSTADKQAACKCI--KSAAGGLNAGKAA 91 Query: 404 ALPGACG 424 +P CG Sbjct: 92 GIPSMCG 98
>IF2_GLOVI (Q7NH85) Translation initiation factor IF-2| Length = 925 Score = 28.5 bits (62), Expect = 6.9 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +3 Query: 6 RIPSRPSPVRQTPEPARS-RSSAQQAHHPEQP 98 R P+ P+P + TP PA + R +A+Q P +P Sbjct: 219 RPPAPPAPAKPTPAPAPAPRPTAEQPSEPRRP 250
>CWC25_NEUCR (Q7SI59) Pre-mRNA-splicing factor cwc-25| Length = 444 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 298 RGGEDRRRHPRHRQVPLRSHGRQGDAHTDQHDTGARSPRRLR 423 +GG+++RRH RSH + D H D+ D R R R Sbjct: 181 KGGKEQRRHKH------RSHHHRSDRHRDRDDDRDRDSARDR 216
>NLT12_PARJU (O04404) Probable nonspecific lipid-transfer protein 1 precursor| (LTP) (Major pollen allergen Par j 1.0102) (Par j I) (P9 protein) Length = 176 Score = 28.1 bits (61), Expect = 9.0 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCC-------GEVKTAVGTPATVKCLCEAMAAKETPIPINM 391 L CL +V K +PSK CC GE KT + +C+ AM +T I+ Sbjct: 48 LMPCLPFVQ--GKEKEPSKGCCSGAKRLDGETKTGLQRVHACECIQTAM---KTYSDIDG 102 Query: 392 TRVLALPGACG 424 V +P CG Sbjct: 103 KLVSEVPKHCG 113
>NLT43_HORVU (Q42842) Nonspecific lipid-transfer protein 4.3 precursor (LTP 4.3)| Length = 115 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCGEVKTAVG---TPATVKCLCEAMAAKETPIPINMTRVL 403 L+ C+ Y AKP CC VK G + A + C+ + K +N + Sbjct: 36 LSPCISYAR--GNGAKPPVACCSGVKRLAGAAQSTADKQAACKCI--KSAAGGLNAGKAA 91 Query: 404 ALPGACG 424 +P CG Sbjct: 92 GIPSMCG 98
>NLT42_HORVU (Q43875) Nonspecific lipid-transfer protein 4.2 precursor (LTP 4.2)| (Low-temperature-responsive protein 4.9) Length = 115 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Frame = +2 Query: 233 LADCLDYVLPGSKSAKPSKTCCGEVKTAVG---TPATVKCLCEAMAAKETPIPINMTRVL 403 L+ C+ Y AKP CC VK G + A + C+ + K +N + Sbjct: 36 LSPCISYAR--GNGAKPPVACCSGVKRLAGAAQSTADKQAACKCI--KSAAGGLNAGKAA 91 Query: 404 ALPGACG 424 +P CG Sbjct: 92 GIPSMCG 98
>HIG_DROME (Q09101) Locomotion-related protein Hikaru genki precursor| Length = 958 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +1 Query: 331 HRQVPLRSHGRQGDAHTDQHDTGARSPRRLRR 426 H + H R+GD+H + D RSPR RR Sbjct: 307 HPETAAAHHRRRGDSHAAELDQRDRSPRWRRR 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,589,938 Number of Sequences: 219361 Number of extensions: 540592 Number of successful extensions: 3209 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 3045 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3208 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)