ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast72c11 |
|---|---|
| Clone Library Name | barley_pub |
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 33.9 bits (76), Expect = 0.097 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -2 Query: 374 AVSLAPPNVRPTALARDXAPSCTLSRMPPPP 282 AVS+APPN+ T + P+ S MPPPP Sbjct: 938 AVSVAPPNILSTPTPLNGIPANAASTMPPPP 968
>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)| Length = 640 Score = 33.9 bits (76), Expect = 0.097 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = -2 Query: 386 VLSAAVSLAPPNVRPTALARDXAPSCTLSRMPPPP 282 VLSA S+ P P A + + APS + +MPPPP Sbjct: 494 VLSAPPSIVPRQKSPAASSNEGAPSGSALQMPPPP 528
>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1265 Score = 30.8 bits (68), Expect = 0.82 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +1 Query: 199 RAADEISRARADREHGALGGGAYVEHPRGGGG 294 R D+ R R GA GGG+ P GGGG Sbjct: 123 RGGDDCGRGSRRRRRGAAGGGSSRAPPAGGGG 154
>OLEO1_MAIZE (P13436) Oleosin Zm-I (Oleosin 16 kDa) (Lipid body-associated major| protein) (Lipid body-associated protein L3) Length = 156 Score = 30.0 bits (66), Expect = 1.4 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 6/51 (11%) Frame = +1 Query: 229 ADREHGAL-GGGAYVEHPRGGGGILESVQ---EGA--XSLASAVGRTFGGA 363 AD GA GGG Y + RGGG E+ Q +GA +L +A TFGG+ Sbjct: 2 ADHHRGATGGGGGYGDLQRGGGMHGEAQQQQKQGAMMTALKAATAATFGGS 52
>SOX21_MOUSE (Q811W0) Transcription factor SOX-21| Length = 276 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%) Frame = +1 Query: 229 ADREHGALGGGAYVEHPRGGGGILESV----QEGAXSLASAVGRTF 354 AD EH AL GA + GGG + ES+ ++ A + A+A R F Sbjct: 104 ADAEHPALKAGAGLHAGAGGGLVPESLLANPEKAAAAAAAAAARVF 149
>SOX21_HUMAN (Q9Y651) Transcription factor SOX-21 (SOX-A)| Length = 276 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%) Frame = +1 Query: 229 ADREHGALGGGAYVEHPRGGGGILESV----QEGAXSLASAVGRTF 354 AD EH AL GA + GGG + ES+ ++ A + A+A R F Sbjct: 104 ADAEHPALKAGAGLHAGAGGGLVPESLLANPEKAAAAAAAAAARVF 149
>ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) Length = 1264 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 199 RAADEISRARADREHGALGGGAYVEHPRGGGGILESVQEGAXSLASAVGRT 351 R D+ R + GA GGG+ P GGG G+ + A+A G T Sbjct: 109 RGGDDCGRGSRRQRRGAAGGGSTRAPPAGGG-----CGGGSAAAAAAAGGT 154
>VG01_EHV1V (P84394) Hypothetical gene 1 protein| Length = 202 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -2 Query: 350 VRPTALARDXAPSCTLSRMPPPPRG 276 +RP ++R A S ++S PPPP G Sbjct: 1 MRPEGVSRGRASSVSISMCPPPPNG 25
>VG01_EHV1H (P84450) Hypothetical gene 1 protein| Length = 202 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -2 Query: 350 VRPTALARDXAPSCTLSRMPPPPRG 276 +RP ++R A S ++S PPPP G Sbjct: 1 MRPEGVSRGRASSVSISMCPPPPNG 25
>VG01_EHV1B (P28978) Hypothetical gene 1 protein| Length = 202 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -2 Query: 350 VRPTALARDXAPSCTLSRMPPPPRG 276 +RP ++R A S ++S PPPP G Sbjct: 1 MRPEGVSRGRASSVSISMCPPPPNG 25
>CLPB_BIFLO (Q8G4X4) Chaperone clpB| Length = 889 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/70 (34%), Positives = 30/70 (42%) Frame = +1 Query: 172 VMQAEMDARRAADEISRARADREHGALGGGAYVEHPRGGGGILESVQEGAXSLASAVGRT 351 + QAE + ++ DE EH +G A P ILE A SL AV Sbjct: 91 IAQAEKEMQQMGDEY----VSTEHLLIGIAA--SKPNQSAEILEKNGVTAASLRKAVPGV 144 Query: 352 FGGAKDTAAD 381 GGAK T+ D Sbjct: 145 RGGAKVTSPD 154
>UREE2_PSESM (Q87VM7) Urease accessory protein ureE 2| Length = 166 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 172 VMQAEMDARRAADEISRARADREHGALGGGAYVEHPRGG 288 V++A +D A E A EHGA GGG + H R G Sbjct: 113 VLKAMLDQLGATTEAIEAPFQPEHGAYGGGHH--HSRAG 149
>DNAJ_RHITR (Q93S23) Chaperone protein dnaJ (Fragment)| Length = 331 Score = 27.7 bits (60), Expect = 7.0 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 9/67 (13%) Frame = +1 Query: 208 DEISRARADR------EHGALGGGAYVEHPRGGGG---ILESVQEGAXSLASAVGRTFGG 360 D RA DR EHG +GGG GGGG I E + A GR+ GG Sbjct: 37 DPQKRAAYDRYGHAAFEHGGMGGGGGFGAGFGGGGFSDIFEDIFGEMMGGGRARGRSSGG 96 Query: 361 AKDTAAD 381 ++ AD Sbjct: 97 -RERGAD 102
>CH38_DROME (P07183) Chorion protein S38| Length = 306 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +1 Query: 241 HGALGGGAYVEHPRGGGGILESVQEGAXSLASAVG 345 HG G G + P GG L + GA S A++ G Sbjct: 223 HGGHGAGPHGPGPHDGGRALPAYASGADSAAASAG 257
>YCLC_PSEPU (P0A177) Hypothetical UPF0065 protein in clcB-clcD intergenic| region precursor Length = 329 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 Query: 202 AADEISRARADREHGALGGGAYVEHPRGGGGILESVQ 312 A D +SR A R LG VE+ G GGI+ S + Sbjct: 46 AIDMVSRVLAQRVSETLGQPVTVENRPGSGGIIGSAE 82 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.127 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,125,081 Number of Sequences: 219361 Number of extensions: 347818 Number of successful extensions: 1457 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1408 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1451 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
