ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast72c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PER53_ARATH (Q42578) Peroxidase 53 precursor (EC 1.11.1.7) (Atpe... 28 5.1
2PER54_ARATH (Q9FG34) Peroxidase 54 precursor (EC 1.11.1.7) (Atpe... 28 5.1
3PER1_SORBI (P84516) Cationic peroxidase SPC4 precursor (EC 1.11.... 28 8.8

>PER53_ARATH (Q42578) Peroxidase 53 precursor (EC 1.11.1.7) (Atperox P53)|
           (ATPA2)
          Length = 335

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 101 AGFHSATCPQLESIAFSSVQAALQRE 178
           A F+S TCP   +I  S++Q ALQ +
Sbjct: 34  ATFYSGTCPNASAIVRSTIQQALQSD 59



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>PER54_ARATH (Q9FG34) Peroxidase 54 precursor (EC 1.11.1.7) (Atperox P54)|
           (ATP29a)
          Length = 358

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 101 AGFHSATCPQLESIAFSSVQAALQRE 178
           A F+S TCP   +I  S++Q ALQ +
Sbjct: 35  ATFYSGTCPNASAIVRSTIQQALQSD 60



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>PER1_SORBI (P84516) Cationic peroxidase SPC4 precursor (EC 1.11.1.7)|
           (Fragment)
          Length = 213

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 107 FHSATCPQLESIAFSSVQAALQREV 181
           F+  +CP+ ESI  S VQ A++R+V
Sbjct: 45  FYKRSCPKAESIVRSFVQDAVRRDV 69


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,526,892
Number of Sequences: 219361
Number of extensions: 269533
Number of successful extensions: 839
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 80,573,946
effective HSP length: 36
effective length of database: 72,676,950
effective search space used: 1744246800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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