ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast72c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474449.1| Oryza sativa (japonica cultivar-group), predic... 82 7e-13
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 82 7e-13
3dbj|AK067667.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 7e-13
4tpe|BN000591.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 82 7e-13
5emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 82 7e-13
6ref|XM_474445.1| Oryza sativa (japonica cultivar-group), predic... 62 6e-07
7emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207... 62 6e-07
8dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 6e-07
9tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 62 6e-07
10emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 62 6e-07
11ref|XM_474454.1| Oryza sativa (japonica cultivar-group), predic... 58 1e-05
12dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 1e-05
13tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 58 1e-05
14dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 56 4e-05
15ref|XM_474448.1| Oryza sativa (japonica cultivar-group), predic... 44 0.15
16dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.15
17dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.15
18dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.15
19dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.15
20tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 44 0.15
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.58
22gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 0.58
23dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.58
24gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 38 9.1
25ref|NM_186814.1| Oryza sativa (japonica cultivar-group), mRNA 38 9.1
26ref|XM_786216.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 9.1
27emb|AL035413.19|HS657E11 Human DNA sequence from clone RP4-657E1... 38 9.1
28emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chro... 38 9.1
29ref|XM_793275.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 9.1
30emb|CR555306.1| Azoarcus sp. EbN1 complete genome 38 9.1
31emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 38 9.1
32emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 38 9.1
33emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 38 9.1
34emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 38 9.1
35gb|AE005740.1| Caulobacter crescentus CB15 section 66 of 359 of ... 38 9.1
36gb|CP000133.1| Rhizobium etli CFN 42, complete genome 38 9.1
37dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
38dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
39dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
40dbj|AP000806.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 9.1
41gb|DQ324455.1| Plutella xylostella clone pxest1 putative carboxy... 38 9.1
42dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 38 9.1 
>ref|XM_474449.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1059

 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                       
Query: 106 cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
           ||||||| | ||| |||||||||||||||||| ||||| |  |||| |||||||||||||
Sbjct: 117 cttccacgctgcgtcgtgcccgcagctggagaccatcgtgcgctccgccgtgcaggcggc 176

                        
Query: 166 gctccagcgggag 178
           |||||||||||||
Sbjct: 177 gctccagcgggag 189
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                            
Query: 106      cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
                ||||||| | ||| |||||||||||||||||| ||||| |  |||| |||||||||||||
Sbjct: 35251633 cttccacgctgcgtcgtgcccgcagctggagaccatcgtgcgctccgccgtgcaggcggc 35251574

                             
Query: 166      gctccagcgggag 178
                |||||||||||||
Sbjct: 35251573 gctccagcgggag 35251561



 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 120      cgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggcgctccagcgggag 178
                |||||||||||||||||| || || |  |||| ||||||||||||||||||||| ||||
Sbjct: 35228641 cgtgcccgcagctggagaccaccgtgcgctccgccgtgcaggcggcgctccagcaggag 35228583



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                            
Query: 106      cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
                ||||||| ||||| |||||||||||||||||  ||||| |  |||||||||||| || ||
Sbjct: 35281694 cttccacgcggcgtcgtgcccgcagctggagtccatcgtgcgctcctccgtgcaagccgc 35281635

                             
Query: 166      gctccagcgggag 178
                 ||||||| ||||
Sbjct: 35281634 tctccagcaggag 35281622



 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 153      ccgtgcaggcggcgctccagcg 174
                ||||||||||||||||||||||
Sbjct: 35243470 ccgtgcaggcggcgctccagcg 35243449
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>dbj|AK067667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118D03, full
           insert sequence
          Length = 1385

 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                       
Query: 106 cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
           ||||||| | ||| |||||||||||||||||| ||||| |  |||| |||||||||||||
Sbjct: 248 cttccacgctgcgtcgtgcccgcagctggagaccatcgtgcgctccgccgtgcaggcggc 307

                        
Query: 166 gctccagcgggag 178
           |||||||||||||
Sbjct: 308 gctccagcgggag 320
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>tpe|BN000591.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx62 gene for
           class III peroxidase 62 precursor, exons 1-2
          Length = 1186

 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                       
Query: 106 cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
           ||||||| | ||| |||||||||||||||||| ||||| |  |||| |||||||||||||
Sbjct: 117 cttccacgctgcgtcgtgcccgcagctggagaccatcgtgcgctccgccgtgcaggcggc 176

                        
Query: 166 gctccagcgggag 178
           |||||||||||||
Sbjct: 177 gctccagcgggag 189
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>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
             complete sequence
          Length = 173770

 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                         
Query: 106   cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
             ||||||| | ||| |||||||||||||||||| ||||| |  |||| |||||||||||||
Sbjct: 47478 cttccacgctgcgtcgtgcccgcagctggagaccatcgtgcgctccgccgtgcaggcggc 47419

                          
Query: 166   gctccagcgggag 178
             |||||||||||||
Sbjct: 47418 gctccagcgggag 47406



 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 120   cgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggcgctccagcgggag 178
             |||||||||||||||||| || || |  |||| ||||||||||||||||||||| ||||
Sbjct: 24486 cgtgcccgcagctggagaccaccgtgcgctccgccgtgcaggcggcgctccagcaggag 24428



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                         
Query: 106   cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
             ||||||| ||||| |||||||||||||||||  ||||| |  |||||||||||| || ||
Sbjct: 77539 cttccacgcggcgtcgtgcccgcagctggagtccatcgtgcgctcctccgtgcaagccgc 77480

                          
Query: 166   gctccagcgggag 178
              ||||||| ||||
Sbjct: 77479 tctccagcaggag 77467



 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 153   ccgtgcaggcggcgctccagcg 174
             ||||||||||||||||||||||
Sbjct: 39315 ccgtgcaggcggcgctccagcg 39294
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>ref|XM_474445.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1047

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 120 cgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggcgctccagcgggag 178
           |||||||||||||||||| || || |  |||| ||||||||||||||||||||| ||||
Sbjct: 161 cgtgcccgcagctggagaccaccgtgcgctccgccgtgcaggcggcgctccagcaggag 219
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>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome
          Length = 124321

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 120   cgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggcgctccagcgggag 178
             |||||||||||||||||| || || |  |||| ||||||||||||||||||||| ||||
Sbjct: 84831 cgtgcccgcagctggagaccaccgtgcgctccgccgtgcaggcggcgctccagcaggag 84889



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 106   cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
             ||||||| ||||| |||||||||||||||||  ||||| |  |||||||||||| || ||
Sbjct: 71540 cttccacgcggcgtcgtgcccgcagctggagtccatcgtgcgctcctccgtgcaagccgc 71599

                          
Query: 166   gctccagcgggag 178
              ||||||| ||||
Sbjct: 71600 tctccagcaggag 71612



 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 153   ccgtgcaggcggcgctccagcg 174
             ||||||||||||||||||||||
Sbjct: 81642 ccgtgcaggcggcgctccagcg 81663



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 106   cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
             ||||||| ||||| ||||||||  |||||||  ||||| |  |||||||||||| || ||
Sbjct: 74831 cttccacgcggcgtcgtgcccgtcgctggaggccatcgtgagctcctccgtgcaagccgc 74890

                     
Query: 166   gctccagc 173
             ||| ||||
Sbjct: 74891 gctgcagc 74898
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>dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132H20, full
           insert sequence
          Length = 1413

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 120 cgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggcgctccagcgggag 178
           |||||||||||||||||| || || |  |||| ||||||||||||||||||||| ||||
Sbjct: 264 cgtgcccgcagctggagaccaccgtgcgctccgccgtgcaggcggcgctccagcaggag 322
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>tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx60 gene for
           class III peroxidase 60 precursor, exons 1-3
          Length = 1221

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 120 cgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggcgctccagcgggag 178
           |||||||||||||||||| || || |  |||| ||||||||||||||||||||| ||||
Sbjct: 161 cgtgcccgcagctggagaccaccgtgcgctccgccgtgcaggcggcgctccagcaggag 219
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>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete
             sequence
          Length = 82895

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 120   cgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggcgctccagcgggag 178
             |||||||||||||||||| || || |  |||| ||||||||||||||||||||| ||||
Sbjct: 72216 cgtgcccgcagctggagaccaccgtgcgctccgccgtgcaggcggcgctccagcaggag 72158



 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 153   ccgtgcaggcggcgctccagcg 174
             ||||||||||||||||||||||
Sbjct: 75405 ccgtgcaggcggcgctccagcg 75384



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                         
Query: 106   cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
             ||||||| ||||| ||||||||  |||||||  ||||| |  |||||||||||| || ||
Sbjct: 82216 cttccacgcggcgtcgtgcccgtcgctggaggccatcgtgagctcctccgtgcaagccgc 82157

                     
Query: 166   gctccagc 173
             ||| ||||
Sbjct: 82156 gctgcagc 82149
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>ref|XM_474454.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1017

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 106 cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
           ||||||| ||||| |||||||||||||||||  ||||| |  |||||||||||| || ||
Sbjct: 102 cttccacgcggcgtcgtgcccgcagctggagtccatcgtgcgctcctccgtgcaagccgc 161

                        
Query: 166 gctccagcgggag 178
            ||||||| ||||
Sbjct: 162 tctccagcaggag 174
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>dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A01, full
           insert sequence
          Length = 1240

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 106 cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
           ||||||| ||||| |||||||||||||||||  ||||| |  |||||||||||| || ||
Sbjct: 168 cttccacgcggcgtcgtgcccgcagctggagtccatcgtgcgctcctccgtgcaagccgc 227

                        
Query: 166 gctccagcgggag 178
            ||||||| ||||
Sbjct: 228 tctccagcaggag 240
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>tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx64 gene for
           class III peroxidase 64 precursor, exons 1-2
          Length = 1091

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 106 cttccactcggcgacgtgcccgcagctggagagcatcgcgttctcctccgtgcaggcggc 165
           ||||||| ||||| |||||||||||||||||  ||||| |  |||||||||||| || ||
Sbjct: 102 cttccacgcggcgtcgtgcccgcagctggagtccatcgtgcgctcctccgtgcaagccgc 161

                        
Query: 166 gctccagcgggag 178
            ||||||| ||||
Sbjct: 162 tctccagcaggag 174
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                               
Query: 141     tcgcgttctcctccgtgcaggcggcgctccag 172
               ||||| ||||||||||||||||||||||||||
Sbjct: 3460292 tcgcggtctcctccgtgcaggcggcgctccag 3460323
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>ref|XM_474448.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 153 ccgtgcaggcggcgctccagcg 174
           ||||||||||||||||||||||
Sbjct: 176 ccgtgcaggcggcgctccagcg 197
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 97      cggcgccggcttccactcggcg 118
               ||||||||||||||||||||||
Sbjct: 3372313 cggcgccggcttccactcggcg 3372292
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>dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B06, full
           insert sequence
          Length = 1299

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 153 ccgtgcaggcggcgctccagcg 174
           ||||||||||||||||||||||
Sbjct: 265 ccgtgcaggcggcgctccagcg 286
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>dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032B08, full
            insert sequence
          Length = 3800

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 153  ccgtgcaggcggcgctccagcgggag 178
            ||||||||||||||||||||| ||||
Sbjct: 2785 ccgtgcaggcggcgctccagcaggag 2810
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>dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L22, full
           insert sequence
          Length = 1333

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 153 ccgtgcaggcggcgctccagcg 174
           ||||||||||||||||||||||
Sbjct: 266 ccgtgcaggcggcgctccagcg 287
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>tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx61 gene for
           class III peroxidase 61, exons 1-2
          Length = 1178

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 153 ccgtgcaggcggcgctccagcg 174
           ||||||||||||||||||||||
Sbjct: 176 ccgtgcaggcggcgctccagcg 197
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 63      tgctagtctcccctgccctgt 83
               |||||||||||||||||||||
Sbjct: 7660956 tgctagtctcccctgccctgt 7660976
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>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    tgctagtctcccctgccctgt 83
             |||||||||||||||||||||
Sbjct: 54334 tgctagtctcccctgccctgt 54314
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 63      tgctagtctcccctgccctgt 83
               |||||||||||||||||||||
Sbjct: 7658791 tgctagtctcccctgccctgt 7658811
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 94      ggacggcgccggcttccac 112
               |||||||||||||||||||
Sbjct: 2108527 ggacggcgccggcttccac 2108545
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>ref|NM_186814.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1350

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 121 gtgcccgcagctggagagc 139
           |||||||||||||||||||
Sbjct: 735 gtgcccgcagctggagagc 753
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>ref|XM_786216.1| PREDICTED: Strongylocentrotus purpuratus similar to myomegalin
            (LOC586433), partial mRNA
          Length = 5273

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 166  gctccagcgggaggtggcg 184
            |||||||||||||||||||
Sbjct: 3297 gctccagcgggaggtggcg 3315
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>emb|AL035413.19|HS657E11 Human DNA sequence from clone RP4-657E11 on chromosome 1p35.1-36.23
             Contains the 5' end of a novel gene, the C1orf33 gene for
             chromosome 1 open reading frame 33, four novel genes, the 
             AKR7A3 gene for aldo-keto reductase family 7, member A3
             (aflatoxin aldehyde reductase), the  AKR7A2 gene for
             aldo-keto reductase family 7, member A2 (aflatoxin
             aldehyde reductase), the 3' end of the CAPZB gene for
             capping protein (actin filament) muscle Z-line, beta and
             two CpG islands, complete sequence
          Length = 154130

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    agtctcccctgccctgtcc 85
             |||||||||||||||||||
Sbjct: 39421 agtctcccctgccctgtcc 39403
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>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete
            sequence
          Length = 201265

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 70   ctcccctgccctgtccgcc 88
            |||||||||||||||||||
Sbjct: 8706 ctcccctgccctgtccgcc 8688
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>ref|XM_793275.1| PREDICTED: Strongylocentrotus purpuratus similar to cingulin-like 1
           (LOC593813), partial mRNA
          Length = 2918

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 166 gctccagcgggaggtggcg 184
           |||||||||||||||||||
Sbjct: 942 gctccagcgggaggtggcg 960
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 95     gacggcgccggcttccact 113
              |||||||||||||||||||
Sbjct: 993905 gacggcgccggcttccact 993923
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 156    tgcaggcggcgctccagcg 174
              |||||||||||||||||||
Sbjct: 262466 tgcaggcggcgctccagcg 262484
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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 156    tgcaggcggcgctccagcg 174
              |||||||||||||||||||
Sbjct: 334139 tgcaggcggcgctccagcg 334157
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>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 156    tgcaggcggcgctccagcg 174
              |||||||||||||||||||
Sbjct: 341932 tgcaggcggcgctccagcg 341914
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 70     ctcccctgccctgtccgcc 88
              |||||||||||||||||||
Sbjct: 132732 ctcccctgccctgtccgcc 132714
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>gb|AE005740.1| Caulobacter crescentus CB15 section 66 of 359 of the complete genome
          Length = 11134

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 154  cgtgcaggcggcgctccag 172
            |||||||||||||||||||
Sbjct: 1546 cgtgcaggcggcgctccag 1564
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 146     ttctcctccgtgcaggcgg 164
               |||||||||||||||||||
Sbjct: 3908645 ttctcctccgtgcaggcgg 3908663
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 121     gtgcccgcagctggagagc 139
               |||||||||||||||||||
Sbjct: 7999263 gtgcccgcagctggagagc 7999281
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>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1341_A08
          Length = 128955

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 121   gtgcccgcagctggagagc 139
             |||||||||||||||||||
Sbjct: 37460 gtgcccgcagctggagagc 37478
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>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0418E08
          Length = 141040

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 121    gtgcccgcagctggagagc 139
              |||||||||||||||||||
Sbjct: 115622 gtgcccgcagctggagagc 115640
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>dbj|AP000806.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-713C6, complete
             sequence
          Length = 120480

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 70    ctcccctgccctgtccgcccctc 92
             ||||||||||||| |||||||||
Sbjct: 32345 ctcccctgccctgcccgcccctc 32323
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>gb|DQ324455.1| Plutella xylostella clone pxest1 putative carboxylesterase mRNA,
           partial cds
          Length = 381

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  acggcgccggcttccactc 114
           |||||||||||||||||||
Sbjct: 193 acggcgccggcttccactc 175
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 154     cgtgcaggcggcgctccag 172
               |||||||||||||||||||
Sbjct: 1019395 cgtgcaggcggcgctccag 1019413


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 955,570
Number of Sequences: 3902068
Number of extensions: 955570
Number of successful extensions: 68741
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67843
Number of HSP's gapped (non-prelim): 898
length of query: 184
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 162
effective length of database: 17,147,199,772
effective search space: 2777846363064
effective search space used: 2777846363064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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