ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast72b01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479588.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1310 Score = 101 bits (51), Expect = 1e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 205 gaaagggttgccgtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccag 264 |||||| |||| || ||||| ||||||||||| || |||||| |||| |||||||||||| Sbjct: 262 gaaaggcttgcagtagtcactggtggaaacagagggattggcctagaagtgtgccgccag 321 Query: 265 cttgctctccagggtgtgacagtcattctcacagc 299 ||||| ||||| ||||||||||||||||| ||||| Sbjct: 322 cttgccctccaaggtgtgacagtcattctgacagc 356
>dbj|AK064532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-H04, full insert sequence Length = 1310 Score = 101 bits (51), Expect = 1e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 205 gaaagggttgccgtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccag 264 |||||| |||| || ||||| ||||||||||| || |||||| |||| |||||||||||| Sbjct: 262 gaaaggcttgcagtagtcactggtggaaacagagggattggcctagaagtgtgccgccag 321 Query: 265 cttgctctccagggtgtgacagtcattctcacagc 299 ||||| ||||| ||||||||||||||||| ||||| Sbjct: 322 cttgccctccaaggtgtgacagtcattctgacagc 356
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 95.6 bits (48), Expect = 9e-17 Identities = 72/80 (90%) Strand = Plus / Plus Query: 220 gtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccagggt 279 ||||| ||||||||||| || |||||| |||| ||||||||||||||||| ||||| ||| Sbjct: 29069603 gtcactggtggaaacagagggattggcctagaagtgtgccgccagcttgccctccaaggt 29069662 Query: 280 gtgacagtcattctcacagc 299 |||||||||||||| ||||| Sbjct: 29069663 gtgacagtcattctgacagc 29069682
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 95.6 bits (48), Expect = 9e-17 Identities = 72/80 (90%) Strand = Plus / Plus Query: 220 gtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccagggt 279 ||||| ||||||||||| || |||||| |||| ||||||||||||||||| ||||| ||| Sbjct: 4721 gtcactggtggaaacagagggattggcctagaagtgtgccgccagcttgccctccaaggt 4780 Query: 280 gtgacagtcattctcacagc 299 |||||||||||||| ||||| Sbjct: 4781 gtgacagtcattctgacagc 4800
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 95.6 bits (48), Expect = 9e-17 Identities = 72/80 (90%) Strand = Plus / Plus Query: 220 gtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccagggt 279 ||||| ||||||||||| || |||||| |||| ||||||||||||||||| ||||| ||| Sbjct: 17560 gtcactggtggaaacagagggattggcctagaagtgtgccgccagcttgccctccaaggt 17619 Query: 280 gtgacagtcattctcacagc 299 |||||||||||||| ||||| Sbjct: 17620 gtgacagtcattctgacagc 17639
>gb|AY502989.1| Sorghum bicolor clone 1028-SC0706 RFLP probe pSB1028 Length = 320 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502988.1| Sorghum bicolor clone 1028-SC0599 RFLP probe pSB1028 Length = 336 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502987.1| Sorghum bicolor clone 1028-SC0326 RFLP probe pSB1028 Length = 333 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502986.1| Sorghum bicolor clone 1028-SC0155 RFLP probe pSB1028 Length = 333 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502985.1| Sorghum bicolor clone 1028-SC0033 RFLP probe pSB1028 Length = 342 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502984.1| Sorghum bicolor clone 1028-RTx406 RFLP probe pSB1028 Length = 342 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502983.1| Sorghum arundinaceum clone 1028-LWA8 RFLP probe pSB1028 Length = 333 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502982.1| Sorghum arundinaceum clone 1028-LWA4 RFLP probe pSB1028 Length = 324 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502981.1| Sorghum bicolor clone 1028-92381 RFLP probe pSB1028 Length = 331 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502980.1| Sorghum bicolor clone 1028-82459 RFLP probe pSB1028 Length = 342 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502979.1| Sorghum bicolor clone 1028-77034 RFLP probe pSB1028 Length = 331 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502978.1| Sorghum bicolor clone 1028-56174 RFLP probe pSB1028 Length = 342 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502977.1| Sorghum bicolor clone 1028-56003 RFLP probe pSB1028 Length = 342 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502976.1| Sorghum bicolor clone 1028-514605 RFLP probe pSB1028 Length = 342 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502975.1| Sorghum bicolor clone 1028-51030 RFLP probe pSB1028 Length = 336 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502974.1| Sorghum bicolor clone 1028-50875 RFLP probe pSB1028 Length = 342 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502973.1| Sorghum bicolor clone 1028-267380 RFLP probe pSB1028 Length = 331 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502972.1| Sorghum bicolor clone 1028-257595 RFLP probe pSB1028 Length = 342 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502971.1| Sorghum bicolor clone 1028-246712 RFLP probe pSB1028 Length = 324 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502970.1| Sorghum bicolor clone 1028-22913 RFLP probe pSB1028 Length = 331 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502969.1| Sorghum arundinaceum clone 1028-225905 RFLP probe pSB1028 Length = 331 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502968.1| Sorghum bicolor clone 1028-195684 RFLP probe pSB1028 Length = 324 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502967.1| Sorghum bicolor clone 1028-152702 RFLP probe pSB1028 Length = 331 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502966.1| Sorghum bicolor clone 1028-102069 RFLP probe pSB1028 Length = 331 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502965.1| Sorghum bicolor clone 1028-RTx430 RFLP probe pSB1028 Length = 342 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|AY502964.1| Sorghum bicolor clone 1028-BTx3197 RFLP probe pSB1028 Length = 342 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 1 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 60 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 61 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 104
>gb|DQ429549.1| Sorghum propinquum locus pSB1028 genomic sequence Length = 1081 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 648 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 707 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 708 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 751
>gb|DQ429548.1| Sorghum bicolor voucher PI585454 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429547.1| Sorghum bicolor voucher PI267539 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429546.1| Sorghum bicolor voucher PI267408 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429545.1| Sorghum bicolor voucher PI221607 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429544.1| Sorghum bicolor voucher PI152702 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429543.1| Sorghum bicolor voucher NSL92371 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429542.1| Sorghum bicolor voucher NSL87902 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429541.1| Sorghum bicolor voucher NSL87666 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429540.1| Sorghum bicolor voucher NSL77217 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429539.1| Sorghum bicolor voucher NSL77034 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429538.1| Sorghum bicolor voucher NSL56174 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429537.1| Sorghum bicolor voucher NSL56003 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429536.1| Sorghum bicolor voucher NSL55243 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429535.1| Sorghum bicolor voucher NSL51365 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429534.1| Sorghum bicolor voucher NSL51030 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429533.1| Sorghum bicolor voucher NSL50875 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|DQ429532.1| Sorghum bicolor voucher BTx623 locus pSB1028 genomic sequence Length = 1125 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 217 gtggtcaccggtggaaacaggggaattggcatagaggtgtgccgccagcttgctctccag 276 |||||||| || ||||||| ||| ||||| | || || |||||||||||||||| | || Sbjct: 692 gtggtcacaggaggaaacaaaggagttggcctcgaagtatgccgccagcttgctcacaag 751 Query: 277 ggtgtgacagtcattctcacagcgagggatgaggaaagaggaaa 320 ||||||||||| || || ||||| ||||||||| || ||||||| Sbjct: 752 ggtgtgacagttatccttacagcaagggatgagaaacgaggaaa 795
>gb|AC115850.11| Mus musculus chromosome 7, clone RP24-252O10, complete sequence Length = 161457 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 300 gagggatgaggaaagaggaaagg 322 ||||||||||||||||||||||| Sbjct: 94955 gagggatgaggaaagaggaaagg 94933
>gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete sequence Length = 117358 Score = 44.1 bits (22), Expect = 0.28 Identities = 31/34 (91%) Strand = Plus / Minus Query: 212 ttgccgtggtcaccggtggaaacaggggaattgg 245 |||||||||| |||||||||||| | |||||||| Sbjct: 68566 ttgccgtggttaccggtggaaaccgaggaattgg 68533
>emb|AL136528.11| Human DNA sequence from clone RP5-1092A11 on chromosome 1p36.2-36.33 Contains the 5' end of the gene for a novel protein (FLJ32825), a novel gene (KIAA0495), two novel genes, the TP73 gene for tumor protein p73, the 5' end of the WDR8 gene for WD repeat domain 8 and five CpG islands, complete sequence Length = 138941 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 114 cacaggcaggaagcccgtagcttcagtggccg 145 |||||||||||||||||| || || ||||||| Sbjct: 32971 cacaggcaggaagcccgtggcctctgtggccg 32940
>gb|BC044603.1| Homo sapiens KIAA0495, mRNA (cDNA clone IMAGE:4817116) Length = 2237 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 114 cacaggcaggaagcccgtagcttcagtggccg 145 |||||||||||||||||| || || ||||||| Sbjct: 1947 cacaggcaggaagcccgtggcctctgtggccg 1916
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cccagcgtccggccgagctc 44 |||||||||||||||||||| Sbjct: 4233075 cccagcgtccggccgagctc 4233056
>dbj|AB007964.1| Homo sapiens mRNA, chromosome 1 specific transcript KIAA0495 Length = 6357 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 114 cacaggcaggaagcccgtagcttcagtggccg 145 |||||||||||||||||| || || ||||||| Sbjct: 6083 cacaggcaggaagcccgtggcctctgtggccg 6052 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,120,835 Number of Sequences: 3902068 Number of extensions: 2120835 Number of successful extensions: 47629 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47516 Number of HSP's gapped (non-prelim): 113 length of query: 335 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 313 effective length of database: 17,147,199,772 effective search space: 5367073528636 effective search space used: 5367073528636 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
