Clone Information

BLAST Search Result

Clone Name	bast72a09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	VE2_HPV5B (P26545) Regulatory protein E2	38	0.007
2	VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains: Lipov...	38	0.007
3	TILS_BRAJA (Q9XBG6) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR...	35	0.034
4	SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)	35	0.057
5	STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoi...	32	0.37
6	DUS8_MOUSE (O09112) Dual specificity protein phosphatase 8 (EC 3...	30	1.1
7	YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragm...	30	1.1
8	AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor	30	1.4
9	YSR2_CAEEL (Q09950) Hypothetical protein F59B10.2	30	1.4
10	CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 prec...	30	1.4
11	RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast prec...	30	1.8
12	CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpresse...	30	1.8
13	VE2_HPV38 (Q80910) Regulatory protein E2	29	2.4
14	SP96_DICDI (P14328) Spore coat protein SP96	29	2.4
15	ESC2_ASHGO (Q756K3) Protein ESC2 (Establishes silent chromatin p...	29	3.1
16	LEP4_PSEPU (P36642) Type 4 prepilin-like proteins leader peptide...	29	3.1
17	TRPD2_STRCO (Q9Z4W9) Anthranilate phosphoribosyltransferase 2 (E...	29	3.1
18	VE2_HPV17 (P36785) Regulatory protein E2	28	4.1
19	HAM1_XANOR (Q5H3S6) HAM1 protein homolog	28	4.1
20	RAD14_CANAL (P53709) DNA repair protein RAD14 (Fragment)	28	4.1
21	CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpresse...	28	4.1
22	CROP_HUMAN (O95232) Cisplatin resistance-associated overexpresse...	28	4.1
23	CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpresse...	28	4.1
24	APC_RAT (P70478) Adenomatous polyposis coli protein (Protein APC)	28	5.4
25	KN8R_YEAST (P53739) Probable serine/threonine-protein kinase YNR...	28	5.4
26	SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,...	28	5.4
27	HIS3_METTH (O26347) Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4....	28	5.4
28	TIR3_YEAST (P40552) Cell wall protein TIR3 precursor	28	7.0
29	TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10 (Tran...	28	7.0
30	TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10 (Tr...	28	7.0
31	TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10 (Tr...	28	7.0
32	DP87_DICDI (Q04503) Prespore protein DP87 precursor	28	7.0
33	CYP1_BRUMA (Q27450) Peptidyl-prolyl cis-trans isomerase 1 (EC 5....	28	7.0
34	CEMA_PINTH (P52764) Chloroplast envelope membrane protein	28	7.0
35	UAFA_STAS1 (Q4A0V8) Uro-adherence factor A precursor	28	7.0
36	LRC41_MOUSE (Q8K1C9) Leucine-rich repeat-containing protein 41 (...	28	7.0
37	RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1	27	9.1
38	RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1	27	9.1
39	RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1	27	9.1
40	RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain...	27	9.1
41	EAF3_USTMA (Q4P827) Chromatin modification-related protein EAF3	27	9.1
42	YR705_MIMIV (Q5UNW3) Hypothetical protein R705	27	9.1
43	VTNC_MOUSE (P29788) Vitronectin precursor (Serum spreading facto...	27	9.1
44	MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-pro...	27	9.1

>VE2_HPV5B (P26545) Regulatory protein E2|
          Length = 514

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = -1

Query: 363 ASSAAMTRSMRRQASSTSGT------SALKRRETAEQRPSERASASLLKMRSTSESGTLS 202
           ++S  +T S + Q + T G       S+  RR   +QR S     S  + RS S+S T +
Sbjct: 229 STSRQLTTSKQPQQTETRGRRYGRRPSSKSRRSQTQQRRSRSRHRSRSRSRSRSKSQTHT 288

Query: 201 KWSSPCARSRSSANTRCL 148
            WS+  +RS S   TR L
Sbjct: 289 TWSTTRSRSTSVGKTRAL 306

to top

>VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains: Lipovitellin LV-1N;|
            Lipovitellin LV-1C; Lipovitellin LV-2]
          Length = 1823

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 23/77 (29%), Positives = 41/77 (53%)
 Frame = -1

Query: 375  GPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKW 196
            GP   SS++ + S    +S++   S +K   T + RP+  +S+S     S+S S + S  
Sbjct: 1214 GPQSHSSSSSSSSSSSSSSASKSFSTVKPPMTRKPRPARSSSSSSSSDSSSSSSSSSSSS 1273

Query: 195  SSPCARSRSSANTRCLD 145
            SS  + S SS+ ++ L+
Sbjct: 1274 SSSSSSSSSSSESKSLE 1290

to top

>TILS_BRAJA (Q9XBG6) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 361

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 20/42 (47%), Positives = 24/42 (57%)
 Frame = +2

Query: 251 DARSLGRCSAVSRRFNALVPLVDDACLRIDRVIAADDAPAGP 376
           DARSL R +A   R NA V ++ D   R  R+   DDAP GP
Sbjct: 218 DARSLARLAARLARANAAVEVLTDGAERFLRLRDRDDAPHGP 259

to top

>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)|
          Length = 220

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = -1

Query: 360 SSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSS 190
           SS++ + S   QAS+TS +S      +A+   SE +S+S     S+SES + S WSS
Sbjct: 168 SSSSSSSSASNQASATSSSSV-----SADGSESESSSSSSSSSSSSSESSSSSSWSS 219

to top

>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac|
          Length = 1120

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 24/69 (34%), Positives = 38/69 (55%)
 Frame = -1

Query: 363 ASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSSPC 184
           A+ AA + +   Q+ ST+  SA  R ETA +R  + ASA  L+  ST++ G +   S+  
Sbjct: 418 ATEAAGSATAAAQSKSTA-ESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATN 476

Query: 183 ARSRSSANT 157
           + S + A T
Sbjct: 477 STSETLAAT 485



 Score = 32.0 bits (71), Expect = 0.37
 Identities = 24/73 (32%), Positives = 34/73 (46%)
 Frame = -1

Query: 375 GPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKW 196
           G A AS+ A  +S    ASS S T+  K  E  EQ  +   SAS  K   T+   + +  
Sbjct: 314 GQASASATAAGKSAESAASSAS-TATTKAGEATEQASAAARSASAAKTSETNAKASETSA 372

Query: 195 SSPCARSRSSANT 157
            S    + SSA++
Sbjct: 373 ESSKTAAASSASS 385



 Score = 31.2 bits (69), Expect = 0.63
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
 Frame = -1

Query: 369 AGASSAAMTRSMRRQASSTSGTSALKRRE----TAEQRPSERASASLLKMRSTSESGTLS 202
           A ++SA    S  + ASS++GT++ K  E     A    S+ A+A+      TSE+   +
Sbjct: 154 AASTSAGQAASSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSAGAAKTSETNASA 213

Query: 201 KWSSPCARSRSSANTR 154
              S  A S S+A T+
Sbjct: 214 SLQS-AATSASTATTK 228

to top

>DUS8_MOUSE (O09112) Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC|
           3.1.3.16) (Neuronal tyrosine threonine phosphatase 1)
          Length = 663

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -1

Query: 375 GPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRS 226
           G + ++S++ + S    +SS+S +S L+RR+     P E A+ +  K RS
Sbjct: 576 GSSSSNSSSSSSSSSSSSSSSSSSSDLRRRDVRTGWPEEPAADAQFKRRS 625

to top

>YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragment)|
          Length = 373

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 363 ASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKW-SSP 187
           +SSA  + S    A+STS TS      ++    S  +++S  K  S+ +S T+S   SSP
Sbjct: 109 SSSAQSSHSSTDDATSTSSTST---TSSSSSSLSSSSTSSSSKQSSSPQSSTMSSTDSSP 165

Query: 186 CARSRSSANT 157
            + S S+++T
Sbjct: 166 TSSSLSASST 175

to top

>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = -1

Query: 372 PAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWS 193
           P+  S++  + S    ++STS +S      +    PS  +++S L   STS S T +  S
Sbjct: 193 PSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLT--STSSSSTSTSQS 250

Query: 192 SPCARSRSSANT 157
           S    S S++ +
Sbjct: 251 STSTSSSSTSTS 262



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
 Frame = -1

Query: 369 AGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWS- 193
           + +S++  + S     SSTS +S+L    ++    S+ ++++     STS S T +  S 
Sbjct: 213 SSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSS 272

Query: 192 ---SPCARSRSSANT 157
              SP ++S S+++T
Sbjct: 273 TSTSPSSKSTSASST 287

to top

>YSR2_CAEEL (Q09950) Hypothetical protein F59B10.2|
          Length = 482

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = -1

Query: 378 RGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSK 199
           R PA A +A +    + +  +     A K++E     P+E +  S     STSES T S+
Sbjct: 175 RKPAPARTAPIVVEKKIEKPAVKEQKARKKKEKTPT-PTESSFESSSDSSSTSESSTSSE 233

Query: 198 WSSPCARSRSSANT 157
            SS  + S S + +
Sbjct: 234 SSSSASESESESKS 247

to top

>CCW14_YEAST (O13547) Covalently-linked cell wall protein 14 precursor (Inner|
           cell wall protein)
          Length = 238

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/70 (31%), Positives = 40/70 (57%)
 Frame = -1

Query: 363 ASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSSPC 184
           +SSA+ + S   +ASS+  T A     ++  + S  +++S  K  S+S + + SK SS  
Sbjct: 94  SSSASSSASSSSKASSS--TKASSSSASSSTKASSSSASSSTKASSSSAAPSSSKASSTE 151

Query: 183 ARSRSSANTR 154
           + S SS++T+
Sbjct: 152 SSSSSSSSTK 161

to top

>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor|
          Length = 1783

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -1

Query: 378 RGPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMR-STSESGT 208
           +GPA A      R  RRQA++++ T+     +T   +P+  A  +  + R S +++G+
Sbjct: 109 QGPAAAGGRGQARHGRRQAAASAATTVSAAPQTGATKPAATAKTTPQRPRGSDADAGS 166

to top

>CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 294 KRRETAEQRPSERASASLLKMRSTSESGTLSKWSS-PCARSRSSANTRCLD 145
           KRR   E+R  ERA     + RS S S   S+ S   C+RSR    +R  D
Sbjct: 271 KRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRD 321

to top

>VE2_HPV38 (Q80910) Regulatory protein E2|
          Length = 441

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 22/63 (34%), Positives = 33/63 (52%)
 Frame = -1

Query: 342 RSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSSPCARSRSSA 163
           R   R+ASS S TS  +R+   E   ++R   S  + RST+  G  ++ SS  +R  S +
Sbjct: 235 RRYGRKASSPSTTSRRQRKGQRETTGTQRRRKSRSRSRSTNRGGRDTRRSS--SRGSSVS 292

Query: 162 NTR 154
            TR
Sbjct: 293 PTR 295

to top

>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 23/69 (33%), Positives = 34/69 (49%)
 Frame = -1

Query: 363 ASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSSPC 184
           +SSAA +      ASS+  +SA     ++   PS  AS+S     S S S   S  +S  
Sbjct: 470 SSSAASSSPSSSAASSSPSSSA-----SSSSSPSSSASSSSAPSSSASSSSAPSSSASSS 524

Query: 183 ARSRSSANT 157
           + S SSA++
Sbjct: 525 SASSSSASS 533



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = -1

Query: 369 AGASSAAMTRSMRRQASSTSGTSALK---RRETAEQRPSERASASLLKMRSTSESGTLSK 199
           A  SSAA +      ASS+  +SA         A   PS  AS+S     S S S   S 
Sbjct: 450 ASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSS 509

Query: 198 WSSPCARSRSSANT 157
            +S  +   SSA++
Sbjct: 510 SASSSSAPSSSASS 523

to top

>ESC2_ASHGO (Q756K3) Protein ESC2 (Establishes silent chromatin protein 2)|
          Length = 407

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
 Frame = -1

Query: 381 WRGPAGASSAAMTRSMRRQASSTSGTSA-----LKRRETAEQRPSERASASLLKMRSTSE 217
           WR  A  SS + +      + S+SG S       KR+ T EQ+P   A+  L +M    E
Sbjct: 83  WRRGASESSRSSSLGSSSPSDSSSGRSLSPVRPAKRKRTDEQQPESEANRFLAEMERDIE 142

to top

>LEP4_PSEPU (P36642) Type 4 prepilin-like proteins leader peptide-processing|
           enzyme (Protein secretion protein XCPA) (Protein pilD)
           [Includes: Leader peptidase (EC 3.4.23.43) (Prepilin
           peptidase); N-methyltransferase (EC 2.1.1.-)]
          Length = 288

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 266 GRCSAVSRRFNALVPLVDDACLRIDRVIA 352
           GRCSA  +R +   PLV+  C  +  V+A
Sbjct: 94  GRCSACKQRISVRYPLVEVGCALLSMVVA 122

to top

>TRPD2_STRCO (Q9Z4W9) Anthranilate phosphoribosyltransferase 2 (EC 2.4.2.18)|
          Length = 335

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 194 PPLARGAGPRRTPGASTAFSTGGFLCSAVRARDR 93
           P     AGPRR  GA T F+  G LC+   AR R
Sbjct: 147 PAFRHTAGPRRELGARTVFNLLGPLCNPSGARLR 180

to top

>VE2_HPV17 (P36785) Regulatory protein E2|
          Length = 452

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 13/90 (14%)
 Frame = -1

Query: 384 RWRGPAGASSAAMTRSMR------------RQASSTSGTSALKRRETAEQRPSERASASL 241
           R+R  A + +A  TR  R            RQA S  G    +RRE +  R S R   S 
Sbjct: 243 RYRRKASSPTATTTRHKRQDIRRSRSTSRGRQAISRGGERRQRRRERSYSRDSSR---SP 299

Query: 240 LKMRSTSESG-TLSKWSSPCARSRSSANTR 154
            + R  S  G T    S   +RSRS + +R
Sbjct: 300 NRGRGGSSGGPTTRSQSRSLSRSRSRSRSR 329

to top

>HAM1_XANOR (Q5H3S6) HAM1 protein homolog|
          Length = 199

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 24/64 (37%), Positives = 33/64 (51%)
 Frame = +2

Query: 176 LLAQGEDHFDSVPDSLVLLIFNKLADARSLGRCSAVSRRFNALVPLVDDACLRIDRVIAA 355
           ++AQGE   D VP++ +  + N L  AR     SAV+     L  L DD+ L +D   A 
Sbjct: 28  IVAQGELGVDDVPETGLTFVENALIKAR---HASAVT----GLPALADDSGLIVD---AL 77

Query: 356 DDAP 367
           D AP
Sbjct: 78  DGAP 81

to top

>RAD14_CANAL (P53709) DNA repair protein RAD14 (Fragment)|
          Length = 121

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
 Frame = -1

Query: 333 RRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGT--LSKWSSPCARSRSSAN 160
           RR+ +           +  E R   RA     K+R     G   +  WSSP    + +  
Sbjct: 47  RREENKVKRKEKKYHDQLREMRKRTRAEEYTRKLRDGKSLGERHVHDWSSPVNIDKHTIK 106

Query: 159 TRCLDC 142
            RC+DC
Sbjct: 107 RRCIDC 112

to top

>CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 294 KRRETAEQRPSERASASLLKMRSTSESGTLSKWSS-PCARSRSSANTR 154
           KRR   E+R  ERA     + RS S S   S+ S   C+RSR    +R
Sbjct: 271 KRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSR 318

to top

>CROP_HUMAN (O95232) Cisplatin resistance-associated overexpressed protein|
           (cAMP regulatory element associated protein 1)
           (CRE-associated protein 1) (CREAP-1) (Luc7A) (Okadaic
           acid-inducible phosphoprotein OA48-18)
          Length = 432

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 294 KRRETAEQRPSERASASLLKMRSTSESGTLSKWSS-PCARSRSSANTR 154
           KRR   E+R  ERA     + RS S S   S+ S   C+RSR    +R
Sbjct: 271 KRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSR 318

to top

>CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 294 KRRETAEQRPSERASASLLKMRSTSESGTLSKWSS-PCARSRSSANTR 154
           KRR   E+R  ERA     + RS S S   S+ S   C+RSR    +R
Sbjct: 271 KRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSR 318

to top

>APC_RAT (P70478) Adenomatous polyposis coli protein (Protein APC)|
          Length = 2842

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 24/85 (28%), Positives = 35/85 (41%)
 Frame = -1

Query: 369 AGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSS 190
           +G SSAA          S+SGT +  RR T+          SLL M  T +   +S+   
Sbjct: 274 SGQSSAARVDHETAGVLSSSGTHSAPRRLTSHLGTKVEMVYSLLSMLGTHDKDDMSR--- 330

Query: 189 PCARSRSSANTRCLDCILDWRIPLL 115
               + SS+   C+       +PLL
Sbjct: 331 -TLLAMSSSQDSCISMRQSGCLPLL 354

to top

>KN8R_YEAST (P53739) Probable serine/threonine-protein kinase YNR047W (EC|
           2.7.11.1)
          Length = 893

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
 Frame = -1

Query: 357 SAAMTRSMRRQASSTSGTSAL----------KRRETAEQRPSERASASLLKMRSTSESGT 208
           S  +TRS +R ASS++  S             R        SE  S+   K++S  +SG 
Sbjct: 39  SKLLTRSWKRNASSSNNMSVSSVNLYSDPENSRESDHNNSGSEGQSSRFSKLKSMFQSGN 98

Query: 207 LSKWSSPCARSRSS 166
            SK +S    S+SS
Sbjct: 99  SSKNASAHNSSQSS 112

to top

>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,|
           arginine/serine-rich 2-interacting protein)
           (SC35-interacting protein 1) (CTD-associated SR protein
           11) (Splicing regulatory protein 129) (SRrp129)
           (NY-REN-40 antigen)
          Length = 1148

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 23/60 (38%), Positives = 26/60 (43%)
 Frame = -1

Query: 333 RRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSSPCARSRSSANTR 154
           RRQ+ S S     KR  T E R SE  S      R    S    K SSP  +SRS +  R
Sbjct: 544 RRQSQSRSP----KRDTTRESRRSESLSPRRETSRENKRSQPRVKDSSPGEKSRSQSRER 599

to top

>HIS3_METTH (O26347) Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH)|
          Length = 138

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +2

Query: 113 RSRGILQSRMQSRHRVFAEDLLLAQGEDHFDSVPDSLVLLIFNKLADARSL 265
           +S+G +   +  RH +  EDL++A  +DH     + L++   N+ A  R+L
Sbjct: 3   KSKGDVNILLNFRHNINGEDLIIAVAQDH--ETGEVLMVAYMNREALRRTL 51

to top

>TIR3_YEAST (P40552) Cell wall protein TIR3 precursor|
          Length = 269

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
 Frame = -1

Query: 363 ASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERAS--ASLLKMRSTSESGTLSKWSS 190
           +S+A+ + S    A+S+S + A K   +A+   S  AS  AS    +++S + + +K SS
Sbjct: 168 SSAASSSASESSSAASSSASEAAKSSSSAKSSGSSAASSAASSASSKASSAASSSAKASS 227

Query: 189 PCARSR---SSANTRCLDCILD 133
              +S    SSA ++     +D
Sbjct: 228 SAEKSTNSSSSATSKNAGAAMD 249

to top

>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (RA301)
          Length = 288

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
 Frame = -1

Query: 327 QASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSS------PCARSRSS 166
           ++ S  G+    R   A  R  E +  S  K RS SES + S+ SS        +RSRS 
Sbjct: 19  RSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSH 78

Query: 165 ANTRCLDCILDWR 127
             +R      D+R
Sbjct: 79  RRSRSRSYSRDYR 91

to top

>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (Silica-induced gene 41 protein) (SIG-41)
          Length = 288

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
 Frame = -1

Query: 327 QASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSS------PCARSRSS 166
           ++ S  G+    R   A  R  E +  S  K RS SES + S+ SS        +RSRS 
Sbjct: 19  RSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSH 78

Query: 165 ANTRCLDCILDWR 127
             +R      D+R
Sbjct: 79  RRSRSRSYSRDYR 91

to top

>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog)
          Length = 288

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
 Frame = -1

Query: 327 QASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSS------PCARSRSS 166
           ++ S  G+    R   A  R  E +  S  K RS SES + S+ SS        +RSRS 
Sbjct: 19  RSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSH 78

Query: 165 ANTRCLDCILDWR 127
             +R      D+R
Sbjct: 79  RRSRSRSYSRDYR 91

to top

>DP87_DICDI (Q04503) Prespore protein DP87 precursor|
          Length = 555

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = -1

Query: 375 GPAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKW 196
           G    SSAA +      +SS S ++A      A   PS  A++S     ++S + + +  
Sbjct: 471 GSTSDSSAASSADSSAASSSPSSSAA---SSAASSEPSSSAASSSAPSSASSSAPSSASS 527

Query: 195 SSPCARSRSSA 163
           S+P + + SSA
Sbjct: 528 SAPSSSASSSA 538

to top

>CYP1_BRUMA (Q27450) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (PPIase|
           1) (Cyclophilin) (BmCYP-1)
          Length = 843

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = -1

Query: 342 RSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSSPCARSRSS 166
           R+  R A   S   + + R+ +    S  + +S    RST+ S   SK SS    SRSS
Sbjct: 779 RTRSRSARRDSDRHSRRSRKRSPSSSSSSSESSSSDSRSTASSSASSKRSSSSDSSRSS 837

to top

>CEMA_PINTH (P52764) Chloroplast envelope membrane protein|
          Length = 261

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -1

Query: 246 SLLKMRSTSESGTLSKWSSPCARSRSSANTRCLDC--ILDWRIPL 118
           S  +   TSESG+L+      +  ++SA+ R L C  +L W IP+
Sbjct: 13  SRFRTELTSESGSLAIHELEVSEYKASASLRYLACLVVLPWVIPI 57

to top

>UAFA_STAS1 (Q4A0V8) Uro-adherence factor A precursor|
          Length = 2316

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -1

Query: 327 QASSTSGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWSS 190
           ++ STS + +L   E+  Q  S  AS SL +  S SES +LS+  S
Sbjct: 837 ESESTSQSLSLSTSESLSQSLSLSASESLSESESLSESESLSESES 882

to top

>LRC41_MOUSE (Q8K1C9) Leucine-rich repeat-containing protein 41 (Protein Muf1)|
          Length = 785

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 372 PAGASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSER 256
           PA AS+++ T S R  ASS S    LKR + A  +   R
Sbjct: 336 PAAASASSSTSSKRAPASSASQPKPLKRFKRAAGKKGPR 374

to top

>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -1

Query: 342 RSMRRQASSTSGTSALKRRETAEQRPSERASASLL-KMRSTSESGTLSKWSSPCARSRSS 166
           RS  + A+  S      R +T ++R +   S+S   +  STS SG+ +   S    S SS
Sbjct: 42  RSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSS 101

Query: 165 ANTR 154
           A++R
Sbjct: 102 ASSR 105

to top

>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -1

Query: 342 RSMRRQASSTSGTSALKRRETAEQRPSERASASLL-KMRSTSESGTLSKWSSPCARSRSS 166
           RS  + A+  S      R +T ++R +   S+S   +  STS SG+ +   S    S SS
Sbjct: 42  RSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSS 101

Query: 165 ANTR 154
           A++R
Sbjct: 102 ASSR 105

to top

>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -1

Query: 342 RSMRRQASSTSGTSALKRRETAEQRPSERASASLL-KMRSTSESGTLSKWSSPCARSRSS 166
           RS  + A+  S      R +T ++R +   S+S   +  STS SG+ +   S    S SS
Sbjct: 42  RSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSS 101

Query: 165 ANTR 154
           A++R
Sbjct: 102 ASSR 105

to top

>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related|
           protein LDC2)
          Length = 305

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -1

Query: 342 RSMRRQASSTSGTSALKRRETAEQRPSERASASLL-KMRSTSESGTLSKWSSPCARSRSS 166
           RS  + A+  S      R +T ++R +   S+S   +  STS SG+ +   S    S SS
Sbjct: 42  RSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSS 101

Query: 165 ANTR 154
           A++R
Sbjct: 102 ASSR 105

to top

>EAF3_USTMA (Q4P827) Chromatin modification-related protein EAF3|
          Length = 303

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 363 ASSAAMTRSMRRQASSTSGTSALKRRETAEQRPSERASASLLKMRSTSES 214
           A + ++  S  + A+STS  S+LKR + +E    + AS    + R   E+
Sbjct: 80  AKAGSLISSAEKSAASTSAASSLKRAKDSELPDRKSASRGTKRSREHVEA 129

to top

>YR705_MIMIV (Q5UNW3) Hypothetical protein R705|
          Length = 313

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = -1

Query: 378 RGPAGASSAAMTRSMRRQASSTSGTSALKR--RETAEQRPSERASASLLKMRSTSESGTL 205
           R     SS + +   R   S TS  S+  +  R +   R    +S S       S SGT 
Sbjct: 218 RSSGSRSSGSRSSGSRSTGSKTSSRSSGSKTSRSSGSSRSRSGSSGSKSGRSRNSRSGTS 277

Query: 204 SKWSSPCARSRSSANTR 154
            + S+  + SRS +++R
Sbjct: 278 GRSSNSRSGSRSGSSSR 294

to top

>VTNC_MOUSE (P29788) Vitronectin precursor (Serum spreading factor) (S-protein)|
          Length = 478

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
 Frame = -1

Query: 381 WRGPAGASSAAMTRSMRRQASSTSGTSALK---RRETAEQRPSERASASLLKMRSTSESG 211
           W G  G   AAM   +    S +    A K   +R + ++  S R         S S   
Sbjct: 338 WHGVPGKVDAAMAGRIYVTGSLSHSAQAKKQKSKRRSRKRYRSRRGRGHRRSQSSNSRRS 397

Query: 210 TLSKWSSPCARSRSSANT-RCLDCILDWRIP 121
           + S W S  +   S   T    D  +DW +P
Sbjct: 398 SRSIWFSLFSSEESGLGTYNNYDYDMDWLVP 428

to top

>MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 1798

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = -1

Query: 366  GASSAAMTRSMRRQASST--SGTSALKRRETAEQRPSERASASLLKMRSTSESGTLSKWS 193
            GA++ A++    R+A     SG S  KR      +  + ASA+ L +   SE  T S  +
Sbjct: 1012 GATAKAISDLAVRRARHRLLSGDSTEKRTARPVNKVIKSASATALSLLIPSEHHTCSPLA 1071

Query: 192  SPCARSRSSANTRCLD 145
            SP +    S+N    D
Sbjct: 1072 SPMSPHSQSSNPSSRD 1087


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.124    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,405,396
Number of Sequences: 219361
Number of extensions: 391891
Number of successful extensions: 2069
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result