ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast72a05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190266.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 501 Score = 272 bits (137), Expect = 9e-70 Identities = 239/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 171 cacacgcacaaggcgttcctcctctgcaactacgcgctgctgggcgcggcctccagctgc 230 |||||||||| ||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 22 cacacgcacagggcgttcctgctctgcaactacgcgctcctgggggcggcgtccagctgc 81 Query: 231 atcttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcatcttc 290 |||||||||||||| |||||||||||||| ||||| || |||||||| |||||| ||||| Sbjct: 82 atcttcctcacgctctccctccgcctcctcccgtccccgtgcggcctcctcctcctcttc 141 Query: 291 ctccacgcgctcaccgccgtcttctccgcggcagggtgctccggctccttcacggccggc 350 |||||||| |||||||||||||||||||| || || ||||| ||||||||||| || || Sbjct: 142 ctccacgccctcaccgccgtcttctccgccgcgggctgctcgggctccttcaccgc--gc 199 Query: 351 ccggcaaacccggcgccctggcacaccgngcacaccgccggcgccgcgctcaccgccatc 410 || || | ||| |||| ||||||| || |||||||| |||||||| |||||||||||| Sbjct: 200 cc-gccacccccgcgcagtggcacaacgcccacaccgcgggcgccgccctcaccgccatc 258 Query: 411 ttccagggcgccgtcgcgctcctcgctttca 441 |||||||||||||||||||| ||||| |||| Sbjct: 259 ttccagggcgccgtcgcgctgctcgccttca 289
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 272 bits (137), Expect = 9e-70 Identities = 239/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Minus Query: 171 cacacgcacaaggcgttcctcctctgcaactacgcgctgctgggcgcggcctccagctgc 230 |||||||||| ||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 38953362 cacacgcacagggcgttcctgctctgcaactacgcgctcctgggggcggcgtccagctgc 38953303 Query: 231 atcttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcatcttc 290 |||||||||||||| |||||||||||||| ||||| || |||||||| |||||| ||||| Sbjct: 38953302 atcttcctcacgctctccctccgcctcctcccgtccccgtgcggcctcctcctcctcttc 38953243 Query: 291 ctccacgcgctcaccgccgtcttctccgcggcagggtgctccggctccttcacggccggc 350 |||||||| |||||||||||||||||||| || || ||||| ||||||||||| || || Sbjct: 38953242 ctccacgccctcaccgccgtcttctccgccgcgggctgctcgggctccttcaccgc--gc 38953185 Query: 351 ccggcaaacccggcgccctggcacaccgngcacaccgccggcgccgcgctcaccgccatc 410 || || | ||| |||| ||||||| || |||||||| |||||||| |||||||||||| Sbjct: 38953184 cc-gccacccccgcgcagtggcacaacgcccacaccgcgggcgccgccctcaccgccatc 38953126 Query: 411 ttccagggcgccgtcgcgctcctcgctttca 441 |||||||||||||||||||| ||||| |||| Sbjct: 38953125 ttccagggcgccgtcgcgctgctcgccttca 38953095 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 167 ggtgcacacgcacaaggcgttcctcctctgcaactac 203 |||||||||||||| ||| ||||| |||||||||||| Sbjct: 22469796 ggtgcacacgcacagggcattcctgctctgcaactac 22469760
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 272 bits (137), Expect = 9e-70 Identities = 239/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Minus Query: 171 cacacgcacaaggcgttcctcctctgcaactacgcgctgctgggcgcggcctccagctgc 230 |||||||||| ||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 26995 cacacgcacagggcgttcctgctctgcaactacgcgctcctgggggcggcgtccagctgc 26936 Query: 231 atcttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcatcttc 290 |||||||||||||| |||||||||||||| ||||| || |||||||| |||||| ||||| Sbjct: 26935 atcttcctcacgctctccctccgcctcctcccgtccccgtgcggcctcctcctcctcttc 26876 Query: 291 ctccacgcgctcaccgccgtcttctccgcggcagggtgctccggctccttcacggccggc 350 |||||||| |||||||||||||||||||| || || ||||| ||||||||||| || || Sbjct: 26875 ctccacgccctcaccgccgtcttctccgccgcgggctgctcgggctccttcaccgc--gc 26818 Query: 351 ccggcaaacccggcgccctggcacaccgngcacaccgccggcgccgcgctcaccgccatc 410 || || | ||| |||| ||||||| || |||||||| |||||||| |||||||||||| Sbjct: 26817 cc-gccacccccgcgcagtggcacaacgcccacaccgcgggcgccgccctcaccgccatc 26759 Query: 411 ttccagggcgccgtcgcgctcctcgctttca 441 |||||||||||||||||||| ||||| |||| Sbjct: 26758 ttccagggcgccgtcgcgctgctcgccttca 26728
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 272 bits (137), Expect = 9e-70 Identities = 239/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Minus Query: 171 cacacgcacaaggcgttcctcctctgcaactacgcgctgctgggcgcggcctccagctgc 230 |||||||||| ||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 118148 cacacgcacagggcgttcctgctctgcaactacgcgctcctgggggcggcgtccagctgc 118089 Query: 231 atcttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcatcttc 290 |||||||||||||| |||||||||||||| ||||| || |||||||| |||||| ||||| Sbjct: 118088 atcttcctcacgctctccctccgcctcctcccgtccccgtgcggcctcctcctcctcttc 118029 Query: 291 ctccacgcgctcaccgccgtcttctccgcggcagggtgctccggctccttcacggccggc 350 |||||||| |||||||||||||||||||| || || ||||| ||||||||||| || || Sbjct: 118028 ctccacgccctcaccgccgtcttctccgccgcgggctgctcgggctccttcaccgc--gc 117971 Query: 351 ccggcaaacccggcgccctggcacaccgngcacaccgccggcgccgcgctcaccgccatc 410 || || | ||| |||| ||||||| || |||||||| |||||||| |||||||||||| Sbjct: 117970 cc-gccacccccgcgcagtggcacaacgcccacaccgcgggcgccgccctcaccgccatc 117912 Query: 411 ttccagggcgccgtcgcgctcctcgctttca 441 |||||||||||||||||||| ||||| |||| Sbjct: 117911 ttccagggcgccgtcgcgctgctcgccttca 117881
>dbj|AK107067.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-E07, full insert sequence Length = 807 Score = 272 bits (137), Expect = 9e-70 Identities = 239/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 171 cacacgcacaaggcgttcctcctctgcaactacgcgctgctgggcgcggcctccagctgc 230 |||||||||| ||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 133 cacacgcacagggcgttcctgctctgcaactacgcgctcctgggggcggcgtccagctgc 192 Query: 231 atcttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcatcttc 290 |||||||||||||| |||||||||||||| ||||| || |||||||| |||||| ||||| Sbjct: 193 atcttcctcacgctctccctccgcctcctcccgtccccgtgcggcctcctcctcctcttc 252 Query: 291 ctccacgcgctcaccgccgtcttctccgcggcagggtgctccggctccttcacggccggc 350 |||||||| |||||||||||||||||||| || || ||||| ||||||||||| || || Sbjct: 253 ctccacgccctcaccgccgtcttctccgccgcgggctgctcgggctccttcaccgc--gc 310 Query: 351 ccggcaaacccggcgccctggcacaccgngcacaccgccggcgccgcgctcaccgccatc 410 || || | ||| |||| ||||||| || |||||||| |||||||| |||||||||||| Sbjct: 311 cc-gccacccccgcgcagtggcacaacgcccacaccgcgggcgccgccctcaccgccatc 369 Query: 411 ttccagggcgccgtcgcgctcctcgctttca 441 |||||||||||||||||||| ||||| |||| Sbjct: 370 ttccagggcgccgtcgcgctgctcgccttca 400
>ref|XM_475501.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5178 Score = 161 bits (81), Expect = 2e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 167 ggtgcacacgcacaaggcgttcctcctctgcaactacgcgctgctgggcgcggcctccag 226 |||||||||||||| ||||||||| |||||||||||| || || ||||| ||||| | Sbjct: 9 ggtgcacacgcacagggcgttcctgctctgcaactacctcctcctcggcgccgcctcggg 68 Query: 227 ctgcatcttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcat 286 |||||||||||||||||| |||||||||||||| ||||| || |||||||| |||||| | Sbjct: 69 ctgcatcttcctcacgctctccctccgcctcctcccgtccccgtgcggcctcctcctcgt 128 Query: 287 cttcctccacgcgctcaccgccgtcttctccgcggcagggtgctccggctccttcac 343 |||||||||||| |||||||||||| || |||| || | ||||| ||||||||||| Sbjct: 129 cttcctccacgccctcaccgccgtcctcgccgccgcggcctgctcgggctccttcac 185 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 371 gcacaccgngcacaccgccggcgccgcgctcaccgccatcttccagggcgccgtcgcgct 430 |||||| | ||||||||| ||||| |||||||||||||||||||| |||| |||||| Sbjct: 210 gcacacggcgcacaccgcgtccgccgtcctcaccgccatcttccagggtgccgccgcgct 269 Query: 431 cctcgctttca 441 ||||| |||| Sbjct: 270 gctcgccttca 280
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 161 bits (81), Expect = 2e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 167 ggtgcacacgcacaaggcgttcctcctctgcaactacgcgctgctgggcgcggcctccag 226 |||||||||||||| ||||||||| |||||||||||| || || ||||| ||||| | Sbjct: 31306 ggtgcacacgcacagggcgttcctgctctgcaactacctcctcctcggcgccgcctcggg 31365 Query: 227 ctgcatcttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcat 286 |||||||||||||||||| |||||||||||||| ||||| || |||||||| |||||| | Sbjct: 31366 ctgcatcttcctcacgctctccctccgcctcctcccgtccccgtgcggcctcctcctcgt 31425 Query: 287 cttcctccacgcgctcaccgccgtcttctccgcggcagggtgctccggctccttcac 343 |||||||||||| |||||||||||| || |||| || | ||||| ||||||||||| Sbjct: 31426 cttcctccacgccctcaccgccgtcctcgccgccgcggcctgctcgggctccttcac 31482 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 371 gcacaccgngcacaccgccggcgccgcgctcaccgccatcttccagggcgccgtcgcgct 430 |||||| | ||||||||| ||||| |||||||||||||||||||| |||| |||||| Sbjct: 31507 gcacacggcgcacaccgcgtccgccgtcctcaccgccatcttccagggtgccgccgcgct 31566 Query: 431 cctcgctttca 441 ||||| |||| Sbjct: 31567 gctcgccttca 31577
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 161 bits (81), Expect = 2e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 167 ggtgcacacgcacaaggcgttcctcctctgcaactacgcgctgctgggcgcggcctccag 226 |||||||||||||| ||||||||| |||||||||||| || || ||||| ||||| | Sbjct: 24844421 ggtgcacacgcacagggcgttcctgctctgcaactacctcctcctcggcgccgcctcggg 24844480 Query: 227 ctgcatcttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcat 286 |||||||||||||||||| |||||||||||||| ||||| || |||||||| |||||| | Sbjct: 24844481 ctgcatcttcctcacgctctccctccgcctcctcccgtccccgtgcggcctcctcctcgt 24844540 Query: 287 cttcctccacgcgctcaccgccgtcttctccgcggcagggtgctccggctccttcac 343 |||||||||||| |||||||||||| || |||| || | ||||| ||||||||||| Sbjct: 24844541 cttcctccacgccctcaccgccgtcctcgccgccgcggcctgctcgggctccttcac 24844597 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 371 gcacaccgngcacaccgccggcgccgcgctcaccgccatcttccagggcgccgtcgcgct 430 |||||| | ||||||||| ||||| |||||||||||||||||||| |||| |||||| Sbjct: 24844622 gcacacggcgcacaccgcgtccgccgtcctcaccgccatcttccagggtgccgccgcgct 24844681 Query: 431 cctcgctttca 441 ||||| |||| Sbjct: 24844682 gctcgccttca 24844692 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccg 423 ||||||||||||||||||||||||| Sbjct: 27887330 ctcaccgccatcttccagggcgccg 27887306 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcg 435 |||| |||||||||||||||||||| |||||| |||| Sbjct: 6831462 ctcatcgccatcttccagggcgccgccgcgctgctcg 6831426 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 ctcaccgccatcttccagggcgcc 422 |||| ||||||||||||||||||| Sbjct: 20113357 ctcatcgccatcttccagggcgcc 20113380 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 265 cgccctgcggcctgctcctcatcttcctccac 296 ||||||||||| |||||| |||||||||||| Sbjct: 14098543 cgccctgcggcatgctccctatcttcctccac 14098574
>dbj|AK108025.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-136-A07, full insert sequence Length = 832 Score = 161 bits (81), Expect = 2e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 167 ggtgcacacgcacaaggcgttcctcctctgcaactacgcgctgctgggcgcggcctccag 226 |||||||||||||| ||||||||| |||||||||||| || || ||||| ||||| | Sbjct: 98 ggtgcacacgcacagggcgttcctgctctgcaactacctcctcctcggcgccgcctcggg 157 Query: 227 ctgcatcttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcat 286 |||||||||||||||||| |||||||||||||| ||||| || |||||||| |||||| | Sbjct: 158 ctgcatcttcctcacgctctccctccgcctcctcccgtccccgtgcggcctcctcctcgt 217 Query: 287 cttcctccacgcgctcaccgccgtcttctccgcggcagggtgctccggctccttcac 343 |||||||||||| |||||||||||| || |||| || | ||||| ||||||||||| Sbjct: 218 cttcctccacgccctcaccgccgtcctcgccgccgcggcctgctcgggctccttcac 274 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 371 gcacaccgngcacaccgccggcgccgcgctcaccgccatcttccagggcgccgtcgcgct 430 |||||| | ||||||||| ||||| |||||||||||||||||||| |||| |||||| Sbjct: 299 gcacacggcgcacaccgcgtccgccgtcctcaccgccatcttccagggtgccgccgcgct 358 Query: 431 cctcgctttca 441 ||||| |||| Sbjct: 359 gctcgccttca 369
>gb|AY111821.1| Zea mays CL16119_1 mRNA sequence Length = 674 Score = 79.8 bits (40), Expect = 7e-12 Identities = 83/96 (86%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 161 cggcaaggtgcacacgcacaaggcgttcctcctctgcaactacgcgctgctgggcgcggc 220 ||||||| |||||||| |||||||| |||||| |||||||||| || ||||||| || Sbjct: 65 cggcaagtcgcacacgcgcaaggcgt-cctcctgtgcaactacgtcctcatgggcgccgc 123 Query: 221 ctccagctgcatcttcctcacgctgtccctccgcct 256 |||||||||||||||||||||||||| || ||||| Sbjct: 124 ttccagctgcatcttcctcacgctgtcgctgcgcct 159 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 295 acgcgctcaccgccgtcttctccgcggcagggtgctccggctcc 338 |||| ||||||||||||||||||||||| || ||||| |||||| Sbjct: 198 acgccctcaccgccgtcttctccgcggccggctgctcgggctcc 241
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||||||||||||| |||||| ||||| |||| Sbjct: 60044 ctcaccgccatcttccagggcgccgccgcgctgctcgccttca 60002
>ref|XM_467687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1138 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||| |||||||||||||||||||| |||||| ||||| |||| Sbjct: 626 ctcatcgccatcttccagggcgccgccgcgctgctcgccttca 584 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||||||||||| |||||| ||||| |||| Sbjct: 227 tcaccgccatcttccagggcgccaccgcgctgctcgccttca 186
>ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0019M20.11), mRNA Length = 642 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgct 430 |||||||||||||||||||||||| |||||| Sbjct: 314 tcaccgccatcttccagggcgccgccgcgct 284
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||| |||||||||||||||||||| |||||| ||||| |||| Sbjct: 110965 ctcatcgccatcttccagggcgccgccgcgctgctcgccttca 110923 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgct 430 |||||||||||||||||||||||| |||||| Sbjct: 110345 tcaccgccatcttccagggcgccgccgcgct 110315
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||| |||||||||||||||||||| |||||| ||||| |||| Sbjct: 14931187 ctcatcgccatcttccagggcgccgccgcgctgctcgccttca 14931145 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgct 430 |||||||||||||||||||||||| |||||| Sbjct: 14930567 tcaccgccatcttccagggcgccgccgcgct 14930537
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||| |||||||||||||||||||| |||||| ||||| |||| Sbjct: 30832699 ctcatcgccatcttccagggcgccgccgcgctgctcgccttca 30832657 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||||||||||| |||||| ||||| |||| Sbjct: 30832203 tcaccgccatcttccagggcgccaccgcgctgctcgccttca 30832162 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 19615626 tcttccagggcgccgccgcgctgctcgccttca 19615594
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||| |||||||||||||||||||| |||||| ||||| |||| Sbjct: 16276 ctcatcgccatcttccagggcgccgccgcgctgctcgccttca 16234 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||||||||||| |||||| ||||| |||| Sbjct: 15780 tcaccgccatcttccagggcgccaccgcgctgctcgccttca 15739
>dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C02, full insert sequence Length = 1138 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||| |||||||||||||||||||| |||||| ||||| |||| Sbjct: 626 ctcatcgccatcttccagggcgccgccgcgctgctcgccttca 584 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||||||||||| |||||| ||||| |||| Sbjct: 227 tcaccgccatcttccagggcgccaccgcgctgctcgccttca 186
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||| |||||||||||||||||||| |||||| ||||| |||| Sbjct: 14939428 ctcatcgccatcttccagggcgccgccgcgctgctcgccttca 14939386 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgct 430 |||||||||||||||||||||||| |||||| Sbjct: 14938808 tcaccgccatcttccagggcgccgccgcgct 14938778
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||||||||||||||| ||||||| |||||| ||||| |||| Sbjct: 28350202 tcaccgccatcttccaaggcgccgccgcgctgctcgccttca 28350161 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgc 436 |||| |||||||||||||||||||| ||| || ||||| Sbjct: 28350822 ctcatcgccatcttccagggcgccgccgctctgctcgc 28350785
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||||||||||||||| ||||||| |||||| ||||| |||| Sbjct: 62780 tcaccgccatcttccaaggcgccgccgcgctgctcgccttca 62739 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgc 436 |||| |||||||||||||||||||| ||| || ||||| Sbjct: 63400 ctcatcgccatcttccagggcgccgccgctctgctcgc 63363
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 400 tcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||||||||||||||| ||||||| |||||| ||||| |||| Sbjct: 148231 tcaccgccatcttccaaggcgccgccgcgctgctcgccttca 148190 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgc 436 |||| |||||||||||||||||||| ||| || ||||| Sbjct: 148851 ctcatcgccatcttccagggcgccgccgctctgctcgc 148814
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccg 423 ||||||||||||||||||||||||| Sbjct: 117747 ctcaccgccatcttccagggcgccg 117723
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0074P11, complete sequence Length = 148753 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcg 435 |||| |||||||||||||||||||| |||||| |||| Sbjct: 62416 ctcatcgccatcttccagggcgccgccgcgctgctcg 62380
>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672C09 Length = 145655 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 167 ggtgcacacgcacaaggcgttcctcctctgcaactac 203 |||||||||||||| ||| ||||| |||||||||||| Sbjct: 93934 ggtgcacacgcacagggcattcctgctctgcaactac 93898
>dbj|AK063468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-A02, full insert sequence Length = 1556 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 167 ggtgcacacgcacaaggcgttcctcctctgcaactac 203 |||||||||||||| ||| ||||| |||||||||||| Sbjct: 652 ggtgcacacgcacagggcattcctgctctgcaactac 688
>gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084F23, complete sequence Length = 89829 Score = 46.1 bits (23), Expect = 0.096 Identities = 38/43 (88%) Strand = Plus / Minus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||| ||||||||||||||| |||| |||||| ||||| |||| Sbjct: 18548 ctcatcgccatcttccagggtgccgccgcgctgctcgccttca 18506
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.096 Identities = 38/43 (88%) Strand = Plus / Plus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||| ||||||||||||||| |||| |||||| ||||| |||| Sbjct: 7539552 ctcatcgccatcttccagggtgccgccgcgctgctcgccttca 7539594 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 23529026 tcttccagggcgccgccgcgctgctcgccttca 23528994
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.096 Identities = 38/43 (88%) Strand = Plus / Plus Query: 399 ctcaccgccatcttccagggcgccgtcgcgctcctcgctttca 441 |||| ||||||||||||||| |||| |||||| ||||| |||| Sbjct: 7609638 ctcatcgccatcttccagggtgccgccgcgctgctcgccttca 7609680 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 23838962 tcttccagggcgccgccgcgctgctcgccttca 23838930
>ref|XM_473031.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 44.1 bits (22), Expect = 0.38 Identities = 61/74 (82%) Strand = Plus / Plus Query: 233 cttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcatcttcct 292 |||||||||||| || ||||||||| |||| || | |||| | ||||||||| |||| Sbjct: 123 cttcctcacgctctcgctccgcctcgtgccctccgtcgacggcttcctcctcatcctcct 182 Query: 293 ccacgcgctcaccg 306 ||||||| |||||| Sbjct: 183 ccacgcgatcaccg 196
>gb|AE006017.1| Caulobacter crescentus CB15 section 343 of 359 of the complete genome Length = 10135 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 402 accgccatcttccagggcgccg 423 |||||||||||||||||||||| Sbjct: 3669 accgccatcttccagggcgccg 3690
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.38 Identities = 61/74 (82%) Strand = Plus / Minus Query: 233 cttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcatcttcct 292 |||||||||||| || ||||||||| |||| || | |||| | ||||||||| |||| Sbjct: 24806375 cttcctcacgctctcgctccgcctcgtgccctccgtcgacggcttcctcctcatcctcct 24806316 Query: 293 ccacgcgctcaccg 306 ||||||| |||||| Sbjct: 24806315 ccacgcgatcaccg 24806302 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 25489722 tcttccagggcgccgccgcgctgctcgccttca 25489754
>dbj|AK062810.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-D12, full insert sequence Length = 914 Score = 44.1 bits (22), Expect = 0.38 Identities = 61/74 (82%) Strand = Plus / Plus Query: 233 cttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcatcttcct 292 |||||||||||| || ||||||||| |||| || | |||| | ||||||||| |||| Sbjct: 238 cttcctcacgctctcgctccgcctcgtgccctccgtcgacggcttcctcctcatcctcct 297 Query: 293 ccacgcgctcaccg 306 ||||||| |||||| Sbjct: 298 ccacgcgatcaccg 311
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 44.1 bits (22), Expect = 0.38 Identities = 61/74 (82%) Strand = Plus / Minus Query: 233 cttcctcacgctgtccctccgcctcctgccgtcgccctgcggcctgctcctcatcttcct 292 |||||||||||| || ||||||||| |||| || | |||| | ||||||||| |||| Sbjct: 68091 cttcctcacgctctcgctccgcctcgtgccctccgtcgacggcttcctcctcatcctcct 68032 Query: 293 ccacgcgctcaccg 306 ||||||| |||||| Sbjct: 68031 ccacgcgatcaccg 68018
>gb|AC008092.4| Drosophila melanogaster clone BACR22F22, complete sequence Length = 175045 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gctgtccctccgcctcctgcc 262 ||||||||||||||||||||| Sbjct: 32800 gctgtccctccgcctcctgcc 32780
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 119712 tcttccagggcgccgccgcgctgctcgccttca 119680
>gb|BT011155.1| Drosophila melanogaster AT29074 full insert cDNA Length = 2443 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gctgtccctccgcctcctgcc 262 ||||||||||||||||||||| Sbjct: 1539 gctgtccctccgcctcctgcc 1519
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 cacaccgccggcgccgcgctc 401 ||||||||||||||||||||| Sbjct: 1924489 cacaccgccggcgccgcgctc 1924509 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 cggccgagatggcgtccggcaaggtgca 172 |||||| ||||| ||||||||||||||| Sbjct: 434660 cggccgtgatggtgtccggcaaggtgca 434633
>emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13, complete sequence Length = 103039 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 67215 tcttccagggcgccgccgcgctgctcgccttca 67247
>ref|NM_169191.2| Drosophila melanogaster CG31146-RD (CG31146), mRNA Length = 5381 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gctgtccctccgcctcctgcc 262 ||||||||||||||||||||| Sbjct: 4064 gctgtccctccgcctcctgcc 4044
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 7647711 tcttccagggcgccgccgcgctgctcgccttca 7647743
>gb|BT024213.1| Drosophila melanogaster RE29404 full insert cDNA Length = 6014 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gctgtccctccgcctcctgcc 262 ||||||||||||||||||||| Sbjct: 4131 gctgtccctccgcctcctgcc 4111
>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0605D08 Length = 144340 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 81912 tcttccagggcgccgccgcgctgctcgccttca 81880
>dbj|AK063799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-F06, full insert sequence Length = 1112 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 134 tcttccagggcgccgccgcgctgctcgccttca 102
>gb|AE003671.4| Drosophila melanogaster chromosome 3R, section 13 of 118 of the complete sequence Length = 315844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 gctgtccctccgcctcctgcc 262 ||||||||||||||||||||| Sbjct: 305418 gctgtccctccgcctcctgcc 305398
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 7647592 tcttccagggcgccgccgcgctgctcgccttca 7647624
>emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151024 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 409 tcttccagggcgccgtcgcgctcctcgctttca 441 ||||||||||||||| |||||| ||||| |||| Sbjct: 35104 tcttccagggcgccgccgcgctgctcgccttca 35136
>emb|AL772296.6| Mouse DNA sequence from clone RP23-66O9 on chromosome 4, complete sequence Length = 191662 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 ctgctcctcatcttcctccac 296 ||||||||||||||||||||| Sbjct: 9919 ctgctcctcatcttcctccac 9899
>ref|XM_529902.1| PREDICTED: Pan troglodytes LOC455069 (LOC455069), mRNA Length = 732 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcgcggcctccagctgcatc 233 |||||||||||||||||||| Sbjct: 484 gcgcggcctccagctgcatc 503
>ref|NM_001372.2| Homo sapiens dynein, axonemal, heavy polypeptide 9 (DNAH9), transcript variant 2, mRNA Length = 13748 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcgcggcctccagctgcatc 233 |||||||||||||||||||| Sbjct: 65 gcgcggcctccagctgcatc 46
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 ctcaccgccatcttccagggcgcc 422 |||| ||||||||||||||||||| Sbjct: 2018 ctcatcgccatcttccagggcgcc 2041
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10, complete sequence Length = 149870 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 ctcaccgccatcttccagggcgcc 422 |||| ||||||||||||||||||| Sbjct: 111682 ctcatcgccatcttccagggcgcc 111705
>gb|AC123738.8| Mus musculus, clone RP24-67N17, complete sequence Length = 163442 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gctcctcatcttcctccacg 297 |||||||||||||||||||| Sbjct: 116964 gctcctcatcttcctccacg 116983
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 265 cgccctgcggcctgctcctcatcttcctccac 296 ||||||||||| |||||| |||||||||||| Sbjct: 46098 cgccctgcggcatgctccctatcttcctccac 46129
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 acgcgctgctgggcgcggcc 221 |||||||||||||||||||| Sbjct: 116032 acgcgctgctgggcgcggcc 116051
>emb|Z80897.2|HSE132D12 Human DNA sequence from clone LL22NC01-132D12 on chromosome 22, complete sequence Length = 26296 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 cgcggcagggtgctccggctcctt 340 ||||||||||||| |||||||||| Sbjct: 5114 cgcggcagggtgcaccggctcctt 5091
>emb|AL583852.6| Human DNA sequence from clone RP11-17G2 on chromosome 10, complete sequence Length = 56701 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 gcctgctcctcatcttcctccacgcgctcacc 305 |||||||||||| |||| ||||||| |||||| Sbjct: 10590 gcctgctcctcagcttcatccacgccctcacc 10621
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cctgctcctcatcttcctcc 294 |||||||||||||||||||| Sbjct: 400269 cctgctcctcatcttcctcc 400250
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 acgcgctgctgggcgcggcc 221 |||||||||||||||||||| Sbjct: 141863 acgcgctgctgggcgcggcc 141882
>dbj|AK055990.1| Homo sapiens cDNA FLJ31428 fis, clone NT2NE2000517, highly similar to Homo sapiens ciliary dynein heavy chain 9 (DNAH9) mRNA Length = 1987 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcgcggcctccagctgcatc 233 |||||||||||||||||||| Sbjct: 26 gcgcggcctccagctgcatc 7
>gb|AC016820.9| Homo sapiens chromosome 10 clone RP11-31E13, complete sequence Length = 194364 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 gcctgctcctcatcttcctccacgcgctcacc 305 |||||||||||| |||| ||||||| |||||| Sbjct: 8136 gcctgctcctcagcttcatccacgccctcacc 8167
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tgccgtcgccctgcggcctg 278 |||||||||||||||||||| Sbjct: 2825799 tgccgtcgccctgcggcctg 2825818
>gb|AC012084.9| Homo sapiens 10 BAC RP11-943E22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167441 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 gcctgctcctcatcttcctccacgcgctcacc 305 |||||||||||| |||| ||||||| |||||| Sbjct: 97057 gcctgctcctcagcttcatccacgccctcacc 97088
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gctccttcacggccggcccg 353 |||||||||||||||||||| Sbjct: 1040705 gctccttcacggccggcccg 1040686
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 cgccgcgctcaccgccatct 411 |||||||||||||||||||| Sbjct: 21404539 cgccgcgctcaccgccatct 21404558
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 cgccgcgctcaccgccatct 411 |||||||||||||||||||| Sbjct: 21644 cgccgcgctcaccgccatct 21663
>emb|AJ328531.1|HSA328531 Homo sapiens genomic sequence surrounding NotI site, clone NB1-510R Length = 727 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcgcggcctccagctgcatc 233 |||||||||||||||||||| Sbjct: 214 gcgcggcctccagctgcatc 233
>gb|AC124474.4| Mus musculus BAC clone RP24-88C10 from 1, complete sequence Length = 225413 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cctgctcctcatcttcctcc 294 |||||||||||||||||||| Sbjct: 106858 cctgctcctcatcttcctcc 106877
>gb|AY112394.1| Zea mays CL15402_1 mRNA sequence Length = 833 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 cttcctcacgctgtccctccgcct 256 ||||||||||||||| |||||||| Sbjct: 172 cttcctcacgctgtcgctccgcct 195
>gb|AC005701.1|AC005701 Homo sapiens chromosome 17, clone hRPK.628_E_12, complete sequence Length = 197455 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcgcggcctccagctgcatc 233 |||||||||||||||||||| Sbjct: 178954 gcgcggcctccagctgcatc 178973
>emb|AJ404468.1|HSA404468 Homo sapiens mRNA for dynein heavy chain 9 (DNAH9 gene) Length = 13816 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcgcggcctccagctgcatc 233 |||||||||||||||||||| Sbjct: 65 gcgcggcctccagctgcatc 46
>emb|AL844884.5| Mouse DNA sequence from clone RP23-266B14 on chromosome 2, complete sequence Length = 150285 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cctgctcctcatcttcctcc 294 |||||||||||||||||||| Sbjct: 86508 cctgctcctcatcttcctcc 86489 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,918,032 Number of Sequences: 3902068 Number of extensions: 2918032 Number of successful extensions: 78164 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77029 Number of HSP's gapped (non-prelim): 1135 length of query: 441 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 419 effective length of database: 17,147,199,772 effective search space: 7184676704468 effective search space used: 7184676704468 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
