ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast72a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106167.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
2ref|NM_190274.1| Oryza sativa (japonica cultivar-group), predic... 230 2e-57
3dbj|AK061032.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 3e-50
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
5dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
6dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
7gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome... 58 2e-05
8dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
10dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 58 2e-05
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.005
13gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.005
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
15gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.005
16gb|AC117827.6| Mus musculus chromosome 1, clone RP24-88L2, compl... 44 0.29
17emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 44 0.29
18gb|AE004943.1| Pseudomonas aeruginosa PAO1, section 504 of 529 o... 44 0.29
19emb|Z70724.1|SLORF1TO5 S.lividans genes for ORF1, ORF2, ORF3, OR... 44 0.29
20gb|CP000110.1| Synechococcus sp. CC9605, complete genome 42 1.1
21emb|CR717785.2|CNS0GGSF Tetraodon nigroviridis full-length cDNA 42 1.1
22emb|AL157820.27| Human DNA sequence from clone RP11-8D7 on chrom... 42 1.1
23emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chro... 42 1.1
24gb|AE004810.1| Pseudomonas aeruginosa PAO1, section 371 of 529 o... 42 1.1
25dbj|AK121862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
26dbj|AK105061.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
27dbj|AK100403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
28dbj|AK065055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
29dbj|AK061505.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
30gb|BC108739.1| Homo sapiens tubulin, gamma 2, mRNA (cDNA clone M... 40 4.5
31gb|AC101727.8| Mus musculus chromosome 1, clone RP23-327G3, comp... 40 4.5
32ref|XM_511514.1| PREDICTED: Pan troglodytes similar to Tubulin g... 40 4.5
33ref|XM_465491.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
34ref|NM_196037.1| Oryza sativa (japonica cultivar-group) hypothet... 40 4.5
35gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 4.5
36gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 4.5
37ref|XM_470558.1| Oryza sativa (japonica cultivar-group), predic... 40 4.5
38ref|XM_479274.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
39ref|XM_473708.1| Oryza sativa (japonica cultivar-group), predic... 40 4.5
40gb|BT019931.1| Homo sapiens tubulin, gamma 1 mRNA, complete cds 40 4.5
41gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
42gb|BC000619.2| Homo sapiens tubulin, gamma 1, mRNA (cDNA clone M... 40 4.5
43gb|BC051890.1| Homo sapiens tubulin, gamma 2, mRNA (cDNA clone M... 40 4.5
44ref|XM_598911.2| PREDICTED: Bos taurus similar to plasticity-rel... 40 4.5
45ref|NM_016437.1| Homo sapiens tubulin, gamma 2 (TUBG2), mRNA 40 4.5
46gb|BC052283.1| Homo sapiens tubulin, gamma 2, mRNA (cDNA clone I... 40 4.5
47gb|AC112154.4| Mus musculus BAC clone RP24-98L2 from chromosome ... 40 4.5
48gb|AC110169.7| Mus musculus chromosome 9, clone RP23-233D3, comp... 40 4.5
49emb|AL844892.5| Human DNA sequence from clone RP11-396M20 on chr... 40 4.5
50emb|AL607122.20| Human DNA sequence from clone RP11-511I2 on chr... 40 4.5
51emb|AL049611.24|HSJ180E22 Human DNA sequence from clone RP1-180E... 40 4.5
52gb|BT008153.1| Synthetic construct Homo sapiens tubulin, gamma 2... 40 4.5
53gb|BC009670.2| Homo sapiens tubulin, gamma 2, mRNA (cDNA clone M... 40 4.5
54emb|CR858834.1| Pongo pygmaeus mRNA; cDNA DKFZp468N0827 (from cl... 40 4.5
55gb|DQ023266.1| Pan troglodytes HSD17B1P pseudogene, complete seq... 40 4.5
56emb|CR626772.1| full-length cDNA clone CS0DF009YL05 of Fetal bra... 40 4.5
57emb|CR625410.1| full-length cDNA clone CS0DA007YK05 of Neuroblas... 40 4.5
58emb|CR623993.1| full-length cDNA clone CS0DI057YC13 of Placenta ... 40 4.5
59emb|CR623937.1| full-length cDNA clone CS0DN003YG10 of Adult bra... 40 4.5
60emb|CR623455.1| full-length cDNA clone CS0DC018YM12 of Neuroblas... 40 4.5
61emb|CR620017.1| full-length cDNA clone CS0DM014YA03 of Fetal liv... 40 4.5
62emb|CR615504.1| full-length cDNA clone CS0DC025YH07 of Neuroblas... 40 4.5
63emb|CR611393.1| full-length cDNA clone CS0DC029YG12 of Neuroblas... 40 4.5
64emb|CR611337.1| full-length cDNA clone CS0DD007YP21 of Neuroblas... 40 4.5
65emb|CR609289.1| full-length cDNA clone CS0DF030YE05 of Fetal bra... 40 4.5
66emb|CR607198.1| full-length cDNA clone CS0DL006YO05 of B cells (... 40 4.5
67emb|CR605839.1| full-length cDNA clone CS0DN002YP09 of Adult bra... 40 4.5
68emb|CR604804.1| full-length cDNA clone CS0DI049YB17 of Placenta ... 40 4.5
69emb|CR604046.1| full-length cDNA clone CS0DC026YB03 of Neuroblas... 40 4.5
70emb|CR603755.1| full-length cDNA clone CS0DI002YD17 of Placenta ... 40 4.5
71emb|CR602914.1| full-length cDNA clone CS0DI076YH16 of Placenta ... 40 4.5
72emb|CR602961.1| full-length cDNA clone CS0DI025YF07 of Placenta ... 40 4.5
73emb|CR599618.1| full-length cDNA clone CS0DI082YA16 of Placenta ... 40 4.5
74emb|CR598475.1| full-length cDNA clone CS0DC015YE08 of Neuroblas... 40 4.5
75emb|CR597415.1| full-length cDNA clone CS0DF030YM01 of Fetal bra... 40 4.5
76emb|CR592407.1| full-length cDNA clone CS0DK009YF13 of HeLa cell... 40 4.5
77emb|CR592317.1| full-length cDNA clone CS0DC003YI14 of Neuroblas... 40 4.5
78emb|CR590773.1| full-length cDNA clone CS0DI041YO03 of Placenta ... 40 4.5
79dbj|AK022324.1| Homo sapiens cDNA FLJ12262 fis, clone MAMMA10015... 40 4.5
80ref|NM_001070.3| Homo sapiens tubulin, gamma 1 (TUBG1), mRNA 40 4.5
81ref|XM_938498.1| PREDICTED: Homo sapiens similar to Tubulin gamm... 40 4.5
82gb|AY057052.1| Mamestra configurata intestinal mucin (MUCIN) mRN... 40 4.5
83emb|CR407642.1| Homo sapiens full open reading frame cDNA clone ... 40 4.5
84gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon... 40 4.5
85gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 4.5
86emb|BX323076.9| Zebrafish DNA sequence from clone DKEY-106A24 in... 40 4.5
87dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
88dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
89dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
90dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
91gb|AC067852.23| Homo sapiens chromosome 17, clone RP11-400F19, c... 40 4.5
92gb|AC100793.8| Homo sapiens chromosome 17, clone CTD-3193K9, com... 40 4.5
93gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.5
94gb|AF225971.1|AF225971 Homo sapiens gamma-tubulin (TUBG2) mRNA, ... 40 4.5
95gb|AF329398.1| Streptomyces roseochromogenes subsp. oscitans clo... 40 4.5
96dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
97dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
98dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
99gb|AY891858.1| Synthetic construct Homo sapiens clone FLH027654.... 40 4.5
100gb|AY891650.1| Synthetic construct Homo sapiens clone FLH026804.... 40 4.5
101gb|AY891649.1| Synthetic construct Homo sapiens clone FLH026803.... 40 4.5
102gb|AY889370.1| Synthetic construct Homo sapiens clone FLH027657.... 40 4.5
103dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
104dbj|AK111124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
105dbj|AK108772.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
106dbj|AK101949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
107dbj|AK060929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
108dbj|AK060527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
109tpe|BN000634.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 4.5
110gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 4.5
111gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
112emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4,... 40 4.5
113gb|AC141869.5| Mus musculus BAC clone RP24-424D1 from 8, complet... 40 4.5
114gb|AC141641.4| Mus musculus BAC clone RP23-336M12 from 8, comple... 40 4.5
115gb|AC173346.1| Mus musculus BAC clone RP23-42N8 from chromosome ... 40 4.5
116emb|AL132666.8|CNS01DT8 Human chromosome 14 DNA sequence BAC R-1... 40 4.5
117gb|M61764.1|HUMGTUB Human gamma-tubulin mRNA, complete cds 40 4.5 
>dbj|AK106167.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B08, full
           insert sequence
          Length = 1177

 Score =  238 bits (120), Expect = 1e-59
 Identities = 177/196 (90%)
 Strand = Plus / Plus

                                                                       
Query: 144 cgggaggaagcggcggcaggccgggttcgaccactacgtgctggccctgcagtggccggg 203
           ||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 172 cgggaggaagcggcggtgggccgggttcgactactacgtgctggcgctgcagtggccggg 231

                                                                       
Query: 204 ctccgtctgccgccagaccaaccactgctgcagctccaacggctgctgccgatcaaaccc 263
           | |||||||||||||||||| |||||||||||||||||| ||||||||||| ||| | ||
Sbjct: 232 caccgtctgccgccagaccagccactgctgcagctccaatggctgctgccgctcacatcc 291

                                                                       
Query: 264 tctcaactggttcacaatccatgggctgtggccgcagtacagctacggtggatggccgtc 323
            ||||| |  ||||| ||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 292 gctcaaattcttcacgatccatgggctgtggccgcagtacagctatgggggatggccatc 351

                           
Query: 324 ctgctgcagaccaacc 339
           ||||||||| ||||||
Sbjct: 352 ctgctgcaggccaacc 367
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>ref|NM_190274.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 801

 Score =  230 bits (116), Expect = 2e-57
 Identities = 176/196 (89%)
 Strand = Plus / Plus

                                                                       
Query: 144 cgggaggaagcggcggcaggccgggttcgaccactacgtgctggccctgcagtggccggg 203
           ||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 111 cgggaggaagcggcggtgggccgggttcgactactacgtgctggcgctgcagtggccggg 170

                                                                       
Query: 204 ctccgtctgccgccagaccaaccactgctgcagctccaacggctgctgccgatcaaaccc 263
           | |||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| | ||
Sbjct: 171 caccgtctgccgccagaccagccattgctgcagctccaatggctgctgccgctcacatcc 230

                                                                       
Query: 264 tctcaactggttcacaatccatgggctgtggccgcagtacagctacggtggatggccgtc 323
            ||||| |  ||||| ||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 231 gctcaaattcttcacgatccatgggctgtggccgcagtacagctatgggggatggccatc 290

                           
Query: 324 ctgctgcagaccaacc 339
           ||||||||| ||||||
Sbjct: 291 ctgctgcaggccaacc 306
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>dbj|AK061032.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H06, full
           insert sequence
          Length = 1047

 Score =  206 bits (104), Expect = 3e-50
 Identities = 158/176 (89%)
 Strand = Plus / Plus

                                                                       
Query: 164 ccgggttcgaccactacgtgctggccctgcagtggccgggctccgtctgccgccagacca 223
           ||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 98  ccgggttcgactactacgtgctggcgctgcagtggccgggcaccgtctgccgccagacca 157

                                                                       
Query: 224 accactgctgcagctccaacggctgctgccgatcaaaccctctcaactggttcacaatcc 283
            ||| |||||||||||||| ||||||||||| ||| | || ||||| |  ||||| ||||
Sbjct: 158 gccattgctgcagctccaatggctgctgccgctcacatccgctcaaattcttcacgatcc 217

                                                                   
Query: 284 atgggctgtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
           ||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||
Sbjct: 218 atgggctgtggccgcagtacagctatgggggatggccatcctgctgcaggccaacc 273
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 3e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                            
Query: 144      cgggaggaagcggcggcaggccgggttcgaccactacgtgctggccctgcagtggccggg 203
                ||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 38990558 cgggaggaagcggcggtgggccgggttcgactactacgtgctggcgctgcagtggccggg 38990499

                                                                   
Query: 204      ctccgtctgccgccagaccaaccactgctgcagctccaacggctgctgccg 254
                | |||||||||||||||||| ||| |||||||||||||| |||||||||||
Sbjct: 38990498 caccgtctgccgccagaccagccattgctgcagctccaatggctgctgccg 38990448



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                        
Query: 284      atgggctgtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
                ||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||
Sbjct: 38990230 atgggctgtggccgcagtacagctatgggggatggccatcctgctgcaggccaacc 38990175
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>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score =  157 bits (79), Expect = 3e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                         
Query: 144   cgggaggaagcggcggcaggccgggttcgaccactacgtgctggccctgcagtggccggg 203
             ||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 64191 cgggaggaagcggcggtgggccgggttcgactactacgtgctggcgctgcagtggccggg 64132

                                                                
Query: 204   ctccgtctgccgccagaccaaccactgctgcagctccaacggctgctgccg 254
             | |||||||||||||||||| ||| |||||||||||||| |||||||||||
Sbjct: 64131 caccgtctgccgccagaccagccattgctgcagctccaatggctgctgccg 64081



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                     
Query: 284   atgggctgtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
             ||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||
Sbjct: 63863 atgggctgtggccgcagtacagctatgggggatggccatcctgctgcaggccaacc 63808
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>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0506A10
          Length = 145265

 Score =  157 bits (79), Expect = 3e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                        
Query: 144  cgggaggaagcggcggcaggccgggttcgaccactacgtgctggccctgcagtggccggg 203
            ||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 8538 cgggaggaagcggcggtgggccgggttcgactactacgtgctggcgctgcagtggccggg 8479

                                                               
Query: 204  ctccgtctgccgccagaccaaccactgctgcagctccaacggctgctgccg 254
            | |||||||||||||||||| ||| |||||||||||||| |||||||||||
Sbjct: 8478 caccgtctgccgccagaccagccattgctgcagctccaatggctgctgccg 8428



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                    
Query: 284  atgggctgtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
            ||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||
Sbjct: 8210 atgggctgtggccgcagtacagctatgggggatggccatcctgctgcaggccaacc 8155
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>gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0030L19, complete sequence
          Length = 128848

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                              
Query: 291   gtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
             |||||||||||||||||| || |||| ||| ||||||||||||||||||
Sbjct: 15804 gtggccgcagtacagctatgggggat-gccatcctgctgcagaccaacc 15757
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                                 
Query: 291      gtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
                |||||||||||||||||| || |||| ||| ||||||||||||||||||
Sbjct: 23146619 gtggccgcagtacagctatgggggat-gccatcctgctgcagaccaacc 23146572
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                                
Query: 291     gtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
               |||||||||||||||||| || |||| ||| ||||||||||||||||||
Sbjct: 6961289 gtggccgcagtacagctatgggggat-gccatcctgctgcagaccaacc 6961336



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 129      ggcgtcgccggcggccggga 148
                ||||||||||||||||||||
Sbjct: 27725346 ggcgtcgccggcggccggga 27725327
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>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0061B07
          Length = 124766

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                              
Query: 291   gtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
             |||||||||||||||||| || |||| ||| ||||||||||||||||||
Sbjct: 20716 gtggccgcagtacagctatgggggat-gccatcctgctgcagaccaacc 20763
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                                 
Query: 291      gtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
                |||||||||||||||||| || |||| ||| ||||||||||||||||||
Sbjct: 23456529 gtggccgcagtacagctatgggggat-gccatcctgctgcagaccaacc 23456482
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/56 (87%), Gaps = 2/56 (3%)
 Strand = Plus / Plus

                                                                       
Query: 284     atgggctgtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
               |||||| |||||||||||||||||| |  |||||| | ||||||||||| ||||||
Sbjct: 5337954 atgggccgtggccgcagtacagctatg--ggatggtcatcctgctgcaggccaacc 5338007



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 120     cgcgctgctggcgtcgccggcggc 143
               ||||||| ||||||||||||||||
Sbjct: 4331068 cgcgctgttggcgtcgccggcggc 4331091
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>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/56 (87%), Gaps = 2/56 (3%)
 Strand = Plus / Plus

                                                                     
Query: 284   atgggctgtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
             |||||| |||||||||||||||||| |  |||||| | ||||||||||| ||||||
Sbjct: 44122 atgggccgtggccgcagtacagctatg--ggatggtcatcctgctgcaggccaacc 44175
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/56 (87%), Gaps = 2/56 (3%)
 Strand = Plus / Plus

                                                                       
Query: 284     atgggctgtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
               |||||| |||||||||||||||||| |  |||||| | ||||||||||| ||||||
Sbjct: 5337169 atgggccgtggccgcagtacagctatg--ggatggtcatcctgctgcaggccaacc 5337222



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 120     cgcgctgctggcgtcgccggcggc 143
               ||||||| ||||||||||||||||
Sbjct: 4331183 cgcgctgttggcgtcgccggcggc 4331206
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>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0006P09, complete sequence
          Length = 153950

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 49/56 (87%), Gaps = 2/56 (3%)
 Strand = Plus / Plus

                                                                     
Query: 284   atgggctgtggccgcagtacagctacggtggatggccgtcctgctgcagaccaacc 339
             |||||| |||||||||||||||||| |  |||||| | ||||||||||| ||||||
Sbjct: 58482 atgggccgtggccgcagtacagctatg--ggatggtcatcctgctgcaggccaacc 58535
to top
>gb|AC117827.6| Mus musculus chromosome 1, clone RP24-88L2, complete sequence
          Length = 213655

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 182   tgctggccctgcagtggccgggctcc 207
             ||||||||||||||| ||||||||||
Sbjct: 57072 tgctggccctgcagttgccgggctcc 57047
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 116    ccggcgcgctgctggcgtcgccggcg 141
              |||||||||||||||||||| |||||
Sbjct: 247838 ccggcgcgctgctggcgtcggcggcg 247863
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>gb|AE004943.1| Pseudomonas aeruginosa PAO1, section 504 of 529 of the complete
            genome
          Length = 12834

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 171  cgaccactacgtgctggccctg 192
            ||||||||||||||||||||||
Sbjct: 3520 cgaccactacgtgctggccctg 3499
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>emb|Z70724.1|SLORF1TO5 S.lividans genes for ORF1, ORF2, ORF3, ORF4 and ORF5
          Length = 5424

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 116  ccggcgcgctgctggcgtcgccggcg 141
            |||||||||||||||||||| |||||
Sbjct: 2655 ccggcgcgctgctggcgtcggcggcg 2680
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 226    cactgctgcagctccaacggc 246
              |||||||||||||||||||||
Sbjct: 238278 cactgctgcagctccaacggc 238298
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>emb|CR717785.2|CNS0GGSF Tetraodon nigroviridis full-length cDNA
          Length = 739

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 82  ccgctctgcttcctctgcctg 102
           |||||||||||||||||||||
Sbjct: 373 ccgctctgcttcctctgcctg 353
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>emb|AL157820.27| Human DNA sequence from clone RP11-8D7 on chromosome 13 Contains
           the 5' end of a novel gene, the  ING1 gene for Inhibitor
           of growth family member 1 and three CpG islands,
           complete sequence
          Length = 97465

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 188 ccctgcagtggccgggctccg 208
           |||||||||||||||||||||
Sbjct: 323 ccctgcagtggccgggctccg 343
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>emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chromosome 13 Contains the 3'
              end of the COL4A2 gene for collagen type IV alpha 2, the
              RAB20 gene for a RAS oncogene family member, a novel gene
              (FLJ10769 FLJ25038 FLJ14198), the 5' end of a novel gene
              (FLJ12118) and three CpG islands, complete sequence
          Length = 177392

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    ccctgcagtggccgggctccg 208
              |||||||||||||||||||||
Sbjct: 175679 ccctgcagtggccgggctccg 175699
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>gb|AE004810.1| Pseudomonas aeruginosa PAO1, section 371 of 529 of the complete
            genome
          Length = 12119

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 133  tcgccggcggccgggaggaagcggc 157
            |||||| ||||||||||||||||||
Sbjct: 4279 tcgccgtcggccgggaggaagcggc 4303
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>dbj|AK121862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103A19, full
           insert sequence
          Length = 1113

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 273 gttcacaatccatgggctgtggccg 297
           |||||| ||||||||||||||||||
Sbjct: 286 gttcacgatccatgggctgtggccg 310
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>dbj|AK105061.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H09, full
           insert sequence
          Length = 1245

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 273 gttcacaatccatgggctgtggccg 297
           |||||| ||||||||||||||||||
Sbjct: 316 gttcacgatccatgggctgtggccg 340
to top
>dbj|AK100403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086O14, full
           insert sequence
          Length = 1222

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 273 gttcacaatccatgggctgtggccg 297
           |||||| ||||||||||||||||||
Sbjct: 306 gttcacgatccatgggctgtggccg 330
to top
>dbj|AK065055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J04, full
           insert sequence
          Length = 1107

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 273 gttcacaatccatgggctgtggccg 297
           |||||| ||||||||||||||||||
Sbjct: 315 gttcacgatccatgggctgtggccg 339
to top
>dbj|AK061505.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E09, full
           insert sequence
          Length = 1242

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 273 gttcacaatccatgggctgtggccg 297
           |||||| ||||||||||||||||||
Sbjct: 314 gttcacgatccatgggctgtggccg 338
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>gb|BC108739.1| Homo sapiens tubulin, gamma 2, mRNA (cDNA clone MGC:131994
            IMAGE:5242733), complete cds
          Length = 1802

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1147 ccgccagaccaaccactgct 1166
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>gb|AC101727.8| Mus musculus chromosome 1, clone RP23-327G3, complete sequence
          Length = 196065

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    cgtgctggccctgcagtggc 199
              ||||||||||||||||||||
Sbjct: 157646 cgtgctggccctgcagtggc 157665
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>ref|XM_511514.1| PREDICTED: Pan troglodytes similar to Tubulin gamma-2 chain (Gamma-2
            tubulin) (LOC454692), mRNA
          Length = 1950

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1524 ccgccagaccaaccactgct 1543
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>ref|XM_465491.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1156

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 120 cgcgctgctggcgtcgccggcggc 143
           ||||||||||||||| ||||||||
Sbjct: 97  cgcgctgctggcgtcaccggcggc 120
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>ref|NM_196037.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0058E19.6), mRNA
          Length = 513

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 137 cggcggccgggaggaagcggcggc 160
           ||||||||||||| ||||||||||
Sbjct: 45  cggcggccgggagcaagcggcggc 68
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 200     cgggctccgtctgccgccag 219
               ||||||||||||||||||||
Sbjct: 1535396 cgggctccgtctgccgccag 1535377
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    cggcgcgctgctggcgtcgccggc 140
              ||||||||||| ||||||||||||
Sbjct: 968737 cggcgcgctgccggcgtcgccggc 968714
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>ref|XM_470558.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 cgcgctgctggcgtcgccggcggc 143
           ||||||| ||||||||||||||||
Sbjct: 933 cgcgctgttggcgtcgccggcggc 910
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>ref|XM_479274.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1023

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 cgcgctgctggcgtcgccgg 139
           ||||||||||||||||||||
Sbjct: 858 cgcgctgctggcgtcgccgg 877
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>ref|XM_473708.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2808

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 133  tcgccggcggccgggaggaagcgg 156
            ||||||||||||||||||| ||||
Sbjct: 1070 tcgccggcggccgggaggaggcgg 1093
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>gb|BT019931.1| Homo sapiens tubulin, gamma 1 mRNA, complete cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 930 ccgccagaccaaccactgct 949
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>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBa0058E19, complete sequence
          Length = 147706

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   cggcggccgggaggaagcggcggc 160
             ||||||||||||| ||||||||||
Sbjct: 46554 cggcggccgggagcaagcggcggc 46577
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>gb|BC000619.2| Homo sapiens tubulin, gamma 1, mRNA (cDNA clone MGC:1593
            IMAGE:3345973), complete cds
          Length = 1645

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 992  ccgccagaccaaccactgct 1011
to top
>gb|BC051890.1| Homo sapiens tubulin, gamma 2, mRNA (cDNA clone MGC:60302
            IMAGE:5726689), complete cds
          Length = 1855

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1129 ccgccagaccaaccactgct 1148
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>ref|XM_598911.2| PREDICTED: Bos taurus similar to plasticity-related protein 3
           (LOC520663), partial mRNA
          Length = 1599

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 52  aggacgaggcgcgggaggcg 71
           ||||||||||||||||||||
Sbjct: 565 aggacgaggcgcgggaggcg 546
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>ref|NM_016437.1| Homo sapiens tubulin, gamma 2 (TUBG2), mRNA
          Length = 1830

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1179 ccgccagaccaaccactgct 1198
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>gb|BC052283.1| Homo sapiens tubulin, gamma 2, mRNA (cDNA clone IMAGE:5458158),
            containing frame-shift errors
          Length = 1837

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1328 ccgccagaccaaccactgct 1347
to top
>gb|AC112154.4| Mus musculus BAC clone RP24-98L2 from chromosome 1, complete sequence
          Length = 200202

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    cgtgctggccctgcagtggc 199
              ||||||||||||||||||||
Sbjct: 199772 cgtgctggccctgcagtggc 199791
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>gb|AC110169.7| Mus musculus chromosome 9, clone RP23-233D3, complete sequence
          Length = 193041

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 90    cttcctctgcctggccttgctgctcccc 117
             |||||||||||||||||||  |||||||
Sbjct: 94668 cttcctctgcctggccttggggctcccc 94641
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>emb|AL844892.5| Human DNA sequence from clone RP11-396M20 on chromosome 10 Contains the
             5' end of the GRID1 gene for glutamate receptor
             (ionotropic) delta 1, the 3' end of the gene for  friend
             of EBNA2 (FOE) (KIAA0261) and five CpG islands, complete
             sequence
          Length = 167780

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    gccgctctgcttcctctgcc 100
             ||||||||||||||||||||
Sbjct: 43225 gccgctctgcttcctctgcc 43206
to top
>emb|AL607122.20| Human DNA sequence from clone RP11-511I2 on chromosome 1 Contains the
             3' end of the gene for UMP-CMP kinase (UMP-CMPK), a novel
             gene, the FOXE3 gene for forkhead box E3, a novel gene
             (MGC12982), the FOXD2 gene for forkhead box D2 and three
             CpG islands, complete sequence
          Length = 106239

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    cctctgcctggccttgctgc 112
             ||||||||||||||||||||
Sbjct: 93096 cctctgcctggccttgctgc 93077
to top
>emb|AL049611.24|HSJ180E22 Human DNA sequence from clone RP1-180E22 on chromosome 6p11.2-12.3
             Contains the 3' part of the gene for a novel protein with
             possible Calmodulin like calcium-binding domains, the gene
             for a TRAM-like protein (KIAA0057),  part of a novel gene
             and a CpG island, complete sequence
          Length = 109813

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    ctgcctggccttgctgctcc 115
             ||||||||||||||||||||
Sbjct: 58419 ctgcctggccttgctgctcc 58438
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>gb|BT008153.1| Synthetic construct Homo sapiens tubulin, gamma 2 mRNA, partial cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 930 ccgccagaccaaccactgct 949
to top
>gb|BC009670.2| Homo sapiens tubulin, gamma 2, mRNA (cDNA clone MGC:8716
            IMAGE:3891214), complete cds
          Length = 1682

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1038 ccgccagaccaaccactgct 1057
to top
>emb|CR858834.1| Pongo pygmaeus mRNA; cDNA DKFZp468N0827 (from clone DKFZp468N0827)
          Length = 1636

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1010 ccgccagaccaaccactgct 1029
to top
>gb|DQ023266.1| Pan troglodytes HSD17B1P pseudogene, complete sequence; and
              17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene,
              complete cds
          Length = 200028

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    ccgccagaccaaccactgct 232
              ||||||||||||||||||||
Sbjct: 158589 ccgccagaccaaccactgct 158608



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    ccgccagaccaaccactgct 232
              ||||||||||||||||||||
Sbjct: 106834 ccgccagaccaaccactgct 106853
to top
>emb|CR626772.1| full-length cDNA clone CS0DF009YL05 of Fetal brain of Homo sapiens
           (human)
          Length = 1551

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 936 ccgccagaccaaccactgct 955
to top
>emb|CR625410.1| full-length cDNA clone CS0DA007YK05 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1582

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 979 ccgccagaccaaccactgct 998
to top
>emb|CR623993.1| full-length cDNA clone CS0DI057YC13 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 805

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 186 ccgccagaccaaccactgct 205
to top
>emb|CR623937.1| full-length cDNA clone CS0DN003YG10 of Adult brain of Homo sapiens
           (human)
          Length = 1274

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 677 ccgccagaccaaccactgct 696
to top
>emb|CR623455.1| full-length cDNA clone CS0DC018YM12 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1728

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1007 ccgccagaccaaccactgct 1026
to top
>emb|CR620017.1| full-length cDNA clone CS0DM014YA03 of Fetal liver of Homo sapiens
           (human)
          Length = 1523

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 936 ccgccagaccaaccactgct 955
to top
>emb|CR615504.1| full-length cDNA clone CS0DC025YH07 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1722

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1128 ccgccagaccaaccactgct 1147
to top
>emb|CR611393.1| full-length cDNA clone CS0DC029YG12 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1016

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 387 ccgccagaccaaccactgct 406
to top
>emb|CR611337.1| full-length cDNA clone CS0DD007YP21 of Neuroblastoma Cot
            50-normalized of Homo sapiens (human)
          Length = 1757

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1152 ccgccagaccaaccactgct 1171
to top
>emb|CR609289.1| full-length cDNA clone CS0DF030YE05 of Fetal brain of Homo sapiens
           (human)
          Length = 1583

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 978 ccgccagaccaaccactgct 997
to top
>emb|CR607198.1| full-length cDNA clone CS0DL006YO05 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1551

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 946 ccgccagaccaaccactgct 965
to top
>emb|CR605839.1| full-length cDNA clone CS0DN002YP09 of Adult brain of Homo sapiens
            (human)
          Length = 1726

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1128 ccgccagaccaaccactgct 1147
to top
>emb|CR604804.1| full-length cDNA clone CS0DI049YB17 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1559

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 966 ccgccagaccaaccactgct 985
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>emb|CR604046.1| full-length cDNA clone CS0DC026YB03 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1552

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 964 ccgccagaccaaccactgct 983
to top
>emb|CR603755.1| full-length cDNA clone CS0DI002YD17 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1539

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 931 ccgccagaccaaccactgct 950
to top
>emb|CR602914.1| full-length cDNA clone CS0DI076YH16 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1647

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1048 ccgccagaccaaccactgct 1067
to top
>emb|CR602961.1| full-length cDNA clone CS0DI025YF07 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1553

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 965 ccgccagaccaaccactgct 984
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>emb|CR599618.1| full-length cDNA clone CS0DI082YA16 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1575

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 968 ccgccagaccaaccactgct 987
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>emb|CR598475.1| full-length cDNA clone CS0DC015YE08 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1539

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 947 ccgccagaccaaccactgct 966
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>emb|CR597415.1| full-length cDNA clone CS0DF030YM01 of Fetal brain of Homo sapiens
           (human)
          Length = 1570

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 964 ccgccagaccaaccactgct 983
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>emb|CR592407.1| full-length cDNA clone CS0DK009YF13 of HeLa cells Cot 25-normalized
            of Homo sapiens (human)
          Length = 1596

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1003 ccgccagaccaaccactgct 1022
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>emb|CR592317.1| full-length cDNA clone CS0DC003YI14 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1590

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 982  ccgccagaccaaccactgct 1001
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>emb|CR590773.1| full-length cDNA clone CS0DI041YO03 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1580

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 988  ccgccagaccaaccactgct 1007
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>dbj|AK022324.1| Homo sapiens cDNA FLJ12262 fis, clone MAMMA1001576, highly similar to
            Human gamma-tubulin mRNA
          Length = 1760

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1129 ccgccagaccaaccactgct 1148
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>ref|NM_001070.3| Homo sapiens tubulin, gamma 1 (TUBG1), mRNA
          Length = 1645

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 992  ccgccagaccaaccactgct 1011
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>ref|XM_938498.1| PREDICTED: Homo sapiens similar to Tubulin gamma-1 chain (Gamma-1
           tubulin) (Gamma-tubulin complex component 1) (GCP-1)
           (LOC649418), mRNA
          Length = 477

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 51  ccgccagaccaaccactgct 70
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>gb|AY057052.1| Mamestra configurata intestinal mucin (MUCIN) mRNA, complete cds
          Length = 2960

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 231 ctgcagctccaacggctgct 250
           ||||||||||||||||||||
Sbjct: 583 ctgcagctccaacggctgct 602
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>emb|CR407642.1| Homo sapiens full open reading frame cDNA clone RZPDo834F112D for
           gene TUBG1, tubulin, gamma 1 complete cds, without
           stopcodon
          Length = 1353

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 930 ccgccagaccaaccactgct 949
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>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 120   cgcgctgctggcgtcgccggcggc 143
             ||||||| ||||||||||||||||
Sbjct: 95429 cgcgctgttggcgtcgccggcggc 95406
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 99     cctggccttgctgctccccggcgcgctgctgg 130
              |||||||| |||||| | ||||||||||||||
Sbjct: 933622 cctggcctcgctgctgctcggcgcgctgctgg 933653
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>emb|BX323076.9| Zebrafish DNA sequence from clone DKEY-106A24 in linkage group 10,
             complete sequence
          Length = 156467

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 217   cagaccaaccactgctgcagctcc 240
             ||||| ||||||||||||||||||
Sbjct: 70934 cagacaaaccactgctgcagctcc 70957
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 133      tcgccggcggccgggaggaagcgg 156
                ||||||||||||||||||| ||||
Sbjct: 29765866 tcgccggcggccgggaggaggcgg 29765843
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 137      cggcggccgggaggaagcggcggc 160
                ||||||||||||| ||||||||||
Sbjct: 10634297 cggcggccgggagcaagcggcggc 10634274
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 120      cgcgctgctggcgtcgccgg 139
                ||||||||||||||||||||
Sbjct: 26503897 cgcgctgctggcgtcgccgg 26503878
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 120      cgcgctgctggcgtcgccggcggc 143
                ||||||||||||||| ||||||||
Sbjct: 15559866 cgcgctgctggcgtcaccggcggc 15559843
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>gb|AC067852.23| Homo sapiens chromosome 17, clone RP11-400F19, complete sequence
          Length = 179146

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   ccgccagaccaaccactgct 232
             ||||||||||||||||||||
Sbjct: 63682 ccgccagaccaaccactgct 63663



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   ccgccagaccaaccactgct 232
             ||||||||||||||||||||
Sbjct: 11855 ccgccagaccaaccactgct 11836
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>gb|AC100793.8| Homo sapiens chromosome 17, clone CTD-3193K9, complete sequence
          Length = 134465

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 3948 ccgccagaccaaccactgct 3967
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 113     tccccggcgcgctgctggcg 132
               ||||||||||||||||||||
Sbjct: 2780793 tccccggcgcgctgctggcg 2780774
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>gb|AF225971.1|AF225971 Homo sapiens gamma-tubulin (TUBG2) mRNA, complete cds
          Length = 1830

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccgccagaccaaccactgct 232
            ||||||||||||||||||||
Sbjct: 1179 ccgccagaccaaccactgct 1198
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>gb|AF329398.1| Streptomyces roseochromogenes subsp. oscitans clorobiocin
            biosynthetic gene cluster, complete sequence
          Length = 42291

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 171  cgaccactacgtgctggccctgca 194
            |||| |||||||||||||||||||
Sbjct: 3922 cgacaactacgtgctggccctgca 3899
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>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1340_C08
          Length = 192167

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   cgcgctgctggcgtcgccgg 139
             ||||||||||||||||||||
Sbjct: 49168 cgcgctgctggcgtcgccgg 49149
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>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1153E06
          Length = 174588

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   ggcgtcgccggcggccggga 148
             ||||||||||||||||||||
Sbjct: 74601 ggcgtcgccggcggccggga 74582
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>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0710B08
          Length = 186991

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   ggcgtcgccggcggccggga 148
             ||||||||||||||||||||
Sbjct: 27855 ggcgtcgccggcggccggga 27836
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>gb|AY891858.1| Synthetic construct Homo sapiens clone FLH027654.01L tubulin gamma
           1 (TUBG1) mRNA, partial cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 930 ccgccagaccaaccactgct 949
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>gb|AY891650.1| Synthetic construct Homo sapiens clone FLH026804.01L tubulin gamma
           2 (TUBG2) mRNA, partial cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 930 ccgccagaccaaccactgct 949
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>gb|AY891649.1| Synthetic construct Homo sapiens clone FLH026803.01L tubulin gamma
           2 (TUBG2) mRNA, partial cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 930 ccgccagaccaaccactgct 949
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>gb|AY889370.1| Synthetic construct Homo sapiens clone FLH027657.01X tubulin gamma
           1 (TUBG1) mRNA, complete cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 930 ccgccagaccaaccactgct 949
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>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0644G05
          Length = 143119

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 120   cgcgctgctggcgtcgccggcggc 143
             ||||||||||||||| ||||||||
Sbjct: 87426 cgcgctgctggcgtcaccggcggc 87403
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>dbj|AK111124.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-C05, full
           insert sequence
          Length = 486

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 ggcgtcgccggcggccggga 148
           ||||||||||||||||||||
Sbjct: 193 ggcgtcgccggcggccggga 212
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>dbj|AK108772.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H07, full
           insert sequence
          Length = 1156

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 120 cgcgctgctggcgtcgccggcggc 143
           ||||||||||||||| ||||||||
Sbjct: 97  cgcgctgctggcgtcaccggcggc 120
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>dbj|AK101949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075D23, full
            insert sequence
          Length = 1575

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  cgcgctgctggcgtcgccggcggc 143
            ||||||| ||||||||||||||||
Sbjct: 1026 cgcgctgttggcgtcgccggcggc 1003
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>dbj|AK060929.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-A09, full
           insert sequence
          Length = 1195

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 120 cgcgctgctggcgtcgccggcggc 143
           ||||||| ||||||||||||||||
Sbjct: 652 cgcgctgttggcgtcgccggcggc 629
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>dbj|AK060527.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F02, full
            insert sequence
          Length = 1249

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  cgcgctgctggcgtcgccggcggc 143
            ||||||| ||||||||||||||||
Sbjct: 1027 cgcgctgttggcgtcgccggcggc 1004
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>tpe|BN000634.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx105 gene
           for class III peroxidase 105 precursor, exon 1
          Length = 1023

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 cgcgctgctggcgtcgccgg 139
           ||||||||||||||||||||
Sbjct: 858 cgcgctgctggcgtcgccgg 877
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 117     cggcgcgctgctggcgtcgccggc 140
               |||||||||||||||| |||||||
Sbjct: 1379692 cggcgcgctgctggcggcgccggc 1379715
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 137      cggcggccgggaggaagcggcggc 160
                ||||||||||||| ||||||||||
Sbjct: 10640336 cggcggccgggagcaagcggcggc 10640313
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>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06,
             complete sequence
          Length = 178552

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 133   tcgccggcggccgggaggaagcgg 156
             ||||||||||||||||||| ||||
Sbjct: 46792 tcgccggcggccgggaggaggcgg 46769
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>gb|AC141869.5| Mus musculus BAC clone RP24-424D1 from 8, complete sequence
          Length = 177664

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 135   gccggcggccgggaggaagcggcg 158
             |||||||||||||||| |||||||
Sbjct: 18325 gccggcggccgggagggagcggcg 18348
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>gb|AC141641.4| Mus musculus BAC clone RP23-336M12 from 8, complete sequence
          Length = 184896

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 135   gccggcggccgggaggaagcggcg 158
             |||||||||||||||| |||||||
Sbjct: 31519 gccggcggccgggagggagcggcg 31496
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>gb|AC173346.1| Mus musculus BAC clone RP23-42N8 from chromosome 9, complete sequence
          Length = 219266

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 90    cttcctctgcctggccttgctgctcccc 117
             |||||||||||||||||||  |||||||
Sbjct: 39179 cttcctctgcctggccttggggctcccc 39206
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>emb|AL132666.8|CNS01DT8 Human chromosome 14 DNA sequence BAC R-16N22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 145250

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    ctgcttcctctgcctggcct 106
             ||||||||||||||||||||
Sbjct: 33854 ctgcttcctctgcctggcct 33873
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>gb|M61764.1|HUMGTUB Human gamma-tubulin mRNA, complete cds
          Length = 1568

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 ccgccagaccaaccactgct 232
           ||||||||||||||||||||
Sbjct: 954 ccgccagaccaaccactgct 973


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,597,919
Number of Sequences: 3902068
Number of extensions: 2597919
Number of successful extensions: 62645
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 61253
Number of HSP's gapped (non-prelim): 1388
length of query: 342
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 320
effective length of database: 17,147,199,772
effective search space: 5487103927040
effective search space used: 5487103927040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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