| Clone Name | bast71h11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... | 36 | 6.9 | 2 | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... | 36 | 6.9 | 3 | emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome | 36 | 6.9 |
|---|
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence Length = 112404 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 28 tcgaggcgtggacgacgg 45 |||||||||||||||||| Sbjct: 109639 tcgaggcgtggacgacgg 109622
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 36.2 bits (18), Expect = 6.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 28 tcgaggcgtggacgacgg 45 |||||||||||||||||| Sbjct: 20139734 tcgaggcgtggacgacgg 20139717
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 36.2 bits (18), Expect = 6.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 24 ccattcgaggcgtggacgacgg 45 |||||||| ||||||||||||| Sbjct: 143248 ccattcgacgcgtggacgacgg 143227 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 192,710 Number of Sequences: 3902068 Number of extensions: 192710 Number of successful extensions: 44998 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44938 Number of HSP's gapped (non-prelim): 60 length of query: 51 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 31 effective length of database: 17,155,003,908 effective search space: 531805121148 effective search space used: 531805121148 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)