| Clone Name | bast71h07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CCNL1_CHICK (Q5ZJP9) Cyclin-L1 | 28 | 6.2 | 2 | RS13_THEVO (Q97B96) 30S ribosomal protein S13P | 28 | 8.1 | 3 | FINC_PLEWA (Q91289) Fibronectin (FN) (Fragment) | 28 | 8.1 | 4 | SOX10_CHICK (Q9W757) Transcription factor SOX-10 (cSOX10) | 28 | 8.1 |
|---|
>CCNL1_CHICK (Q5ZJP9) Cyclin-L1| Length = 534 Score = 28.1 bits (61), Expect = 6.2 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = +3 Query: 96 GSAASVSRATESGAPSGPFLVSRTGDAG*TGSRVTVP 206 GSAA+V+ A G P+GP T A TGS VP Sbjct: 6 GSAAAVA-AVAGGGPAGPHAAGVTAGAVTTGSGAPVP 41
>RS13_THEVO (Q97B96) 30S ribosomal protein S13P| Length = 171 Score = 27.7 bits (60), Expect = 8.1 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +2 Query: 176 GMNRKPGYGAQLRANLEPTKGVGRLRQ 256 G+ + GY R NL+PTK +G L++ Sbjct: 54 GIGLRLGYAIAERLNLQPTKKIGELKE 80
>FINC_PLEWA (Q91289) Fibronectin (FN) (Fragment)| Length = 1328 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 125 GIGCSKWAIFGKQNWRCGMNRKPGYG 202 G CS G+Q WRC R+PG G Sbjct: 1265 GAICSCTCYGGQQGWRCDNCRRPGAG 1290
>SOX10_CHICK (Q9W757) Transcription factor SOX-10 (cSOX10)| Length = 461 Score = 27.7 bits (60), Expect = 8.1 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -1 Query: 153 KMAHLEHPIPWHGSPKQPSHPTY 85 K AHL+H P GSP HP + Sbjct: 201 KNAHLDHRHPGEGSPMSDGHPEH 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,506,736 Number of Sequences: 219361 Number of extensions: 791655 Number of successful extensions: 2005 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1948 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2005 length of database: 80,573,946 effective HSP length: 61 effective length of database: 67,192,925 effective search space used: 1612630200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)