ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast71h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.005
2gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genom... 50 0.005
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
4ref|XM_545903.2| PREDICTED: Canis familiaris similar to VPS10 do... 44 0.33
5gb|DQ141107.1| Drosophila mojavensis Dscam gene, partial sequence 42 1.3
6emb|CT010441.11| Mouse DNA sequence from clone CH29-521N19 on ch... 42 1.3
7emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
8gb|DQ317108.1| Drosophila mojavensis Dscam gene, exons 3 through 24 42 1.3
9gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
10gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
12gb|AC154912.3| Mus musculus BAC clone RP23-23B10 from 17, comple... 42 1.3
13gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
14gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 5.2
15ref|XM_468155.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
16ref|XM_472640.1| Oryza sativa (japonica cultivar-group), predic... 40 5.2
17gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
18gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
19gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromo... 40 5.2
20ref|XM_954554.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.2
21ref|XM_331009.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.2
22gb|AC133937.3| Mus musculus BAC clone RP24-486L5 from chromosome... 40 5.2
23gb|AC115743.10| Mus musculus chromosome 5, clone RP23-477P24, co... 40 5.2
24ref|XM_741768.1| Aspergillus fumigatus Af293 aminotransferase, c... 40 5.2
25gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome... 40 5.2
26dbj|AK053853.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 5.2
27dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
28dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
29dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
30dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
32gb|AY004316.1| Mus musculus VPS10 domain receptor protein SorCS2... 40 5.2
33ref|NM_030889.1| Mus musculus sortilin-related VPS10 domain cont... 40 5.2
34dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.2
35dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
36dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
37dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
38dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
39gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone ... 40 5.2
40dbj|AB093294.1| Mus musculus mRNA for mKIAA1329 protein 40 5.2
41emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4,... 40 5.2
42gb|M99606.1|HUMIGLAFB Human (clone K1B12L) Ig rearranged L-chain... 40 5.2
43gb|AF418087.1| Leucaena leucocephala subsp. glabrata clone a int... 40 5.2
44gb|AF418086.1| Leucaena leucocephala subsp. leucocephala clone a... 40 5.2 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 137      cagcccgcgaccgcgacggcgacgg 161
                |||||||||||||||||||||||||
Sbjct: 31753861 cagcccgcgaccgcgacggcgacgg 31753837
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>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete
             sequence
          Length = 134496

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 137   cagcccgcgaccgcgacggcgacgg 161
             |||||||||||||||||||||||||
Sbjct: 79087 cagcccgcgaccgcgacggcgacgg 79063
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 137      cagcccgcgaccgcgacggcgacgg 161
                |||||||||||||||||||||||||
Sbjct: 31844377 cagcccgcgaccgcgacggcgacgg 31844353
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>ref|XM_545903.2| PREDICTED: Canis familiaris similar to VPS10 domain receptor
           protein SORCS 2 (LOC488785), mRNA
          Length = 3156

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 342 aagaggaggacaaggtgctggc 363
           ||||||||||||||||||||||
Sbjct: 449 aagaggaggacaaggtgctggc 470
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>gb|DQ141107.1| Drosophila mojavensis Dscam gene, partial sequence
          Length = 75248

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aggacaaggtgctggcgccag 368
             |||||||||||||||||||||
Sbjct: 39230 aggacaaggtgctggcgccag 39210
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>emb|CT010441.11| Mouse DNA sequence from clone CH29-521N19 on chromosome 17, complete
             sequence
          Length = 235642

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 345   aggaggacaaggtgctggcgc 365
             |||||||||||||||||||||
Sbjct: 38624 aggaggacaaggtgctggcgc 38604
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 141     ccgcgaccgcgacggcgacgg 161
               |||||||||||||||||||||
Sbjct: 1343331 ccgcgaccgcgacggcgacgg 1343351
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>gb|DQ317108.1| Drosophila mojavensis Dscam gene, exons 3 through 24
          Length = 57228

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aggacaaggtgctggcgccag 368
             |||||||||||||||||||||
Sbjct: 18441 aggacaaggtgctggcgccag 18421
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>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0072L08, complete sequence
          Length = 152272

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   cccgcgaccgcgacggcgacg 160
             |||||||||||||||||||||
Sbjct: 64231 cccgcgaccgcgacggcgacg 64251
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>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0072L08, sequencing in progress, complete sequence
          Length = 152272

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   cccgcgaccgcgacggcgacg 160
             |||||||||||||||||||||
Sbjct: 64231 cccgcgaccgcgacggcgacg 64251
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 140      cccgcgaccgcgacggcgacg 160
                |||||||||||||||||||||
Sbjct: 21061916 cccgcgaccgcgacggcgacg 21061936
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>gb|AC154912.3| Mus musculus BAC clone RP23-23B10 from 17, complete sequence
          Length = 228141

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 345    aggaggacaaggtgctggcgc 365
              |||||||||||||||||||||
Sbjct: 119529 aggaggacaaggtgctggcgc 119509
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 140      cccgcgaccgcgacggcgacg 160
                |||||||||||||||||||||
Sbjct: 21372157 cccgcgaccgcgacggcgacg 21372177
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 139    gcccgcgaccgcgacggcgacggt 162
              |||||||||||||| |||||||||
Sbjct: 965133 gcccgcgaccgcgatggcgacggt 965156
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>ref|XM_468155.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 942

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 231 gccgtgccgcgacatgtaccacgg 254
           |||| |||||||||||||||||||
Sbjct: 525 gccgcgccgcgacatgtaccacgg 548
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>ref|XM_472640.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1410

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 cggcgctccgcgcgcagtgc 271
           ||||||||||||||||||||
Sbjct: 308 cggcgctccgcgcgcagtgc 327
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>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0111O13, complete sequence
          Length = 126332

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   ccgcgaccgcgacggcgacg 160
             ||||||||||||||||||||
Sbjct: 19748 ccgcgaccgcgacggcgacg 19767
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>gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0069I13, complete sequence
          Length = 94252

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   ccgcgaccgcgacggcgacg 160
             ||||||||||||||||||||
Sbjct: 56546 ccgcgaccgcgacggcgacg 56565
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>gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromosome 22, complete
              sequence
          Length = 209755

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     agctagccaagccacccaac 108
              ||||||||||||||||||||
Sbjct: 122966 agctagccaagccacccaac 122985



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     agctagccaagccacccaac 108
              ||||||||||||||||||||
Sbjct: 122393 agctagccaagccacccaac 122412
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>ref|XM_954554.1| Neurospora crassa OR74A hypothetical protein (NCU02234.1) partial
            mRNA
          Length = 5361

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 296  gtggaggcgcgcaaggagga 315
            ||||||||||||||||||||
Sbjct: 1028 gtggaggcgcgcaaggagga 1047
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>ref|XM_331009.1| Neurospora crassa OR74A hypothetical protein (NCU02234.1) partial
            mRNA
          Length = 5361

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 296  gtggaggcgcgcaaggagga 315
            ||||||||||||||||||||
Sbjct: 1028 gtggaggcgcgcaaggagga 1047
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>gb|AC133937.3| Mus musculus BAC clone RP24-486L5 from chromosome 5, complete sequence
          Length = 209392

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    gaggaggacaaggtgctggc 363
              ||||||||||||||||||||
Sbjct: 137806 gaggaggacaaggtgctggc 137825
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>gb|AC115743.10| Mus musculus chromosome 5, clone RP23-477P24, complete sequence
          Length = 189890

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   gaggaggacaaggtgctggc 363
             ||||||||||||||||||||
Sbjct: 24263 gaggaggacaaggtgctggc 24244
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>ref|XM_741768.1| Aspergillus fumigatus Af293 aminotransferase, classes I and II
           family (Afu7g00690) partial mRNA
          Length = 1176

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 ccgcgcgcagtgcggcctgg 278
           ||||||||||||||||||||
Sbjct: 484 ccgcgcgcagtgcggcctgg 465
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>gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome 5, complete
            sequence
          Length = 180919

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gaggaggacaaggtgctggc 363
            ||||||||||||||||||||
Sbjct: 4711 gaggaggacaaggtgctggc 4730
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>dbj|AK053853.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130314P11 product:similar to VPS10
           DOMAIN PROTEIN (FRAGMENT) [Homo sapiens], full insert
           sequence
          Length = 2676

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gaggaggacaaggtgctggc 363
           ||||||||||||||||||||
Sbjct: 839 gaggaggacaaggtgctggc 858
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 252      cggcgctccgcgcgcagtgc 271
                ||||||||||||||||||||
Sbjct: 22152985 cggcgctccgcgcgcagtgc 22152966
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 142      cgcgaccgcgacggcgacgg 161
                ||||||||||||||||||||
Sbjct: 25087616 cgcgaccgcgacggcgacgg 25087635
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 142      cgcgaccgcgacggcgacgg 161
                ||||||||||||||||||||
Sbjct: 19672905 cgcgaccgcgacggcgacgg 19672886
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 141     ccgcgaccgcgacggcgacg 160
               ||||||||||||||||||||
Sbjct: 2187317 ccgcgaccgcgacggcgacg 2187336
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 231      gccgtgccgcgacatgtaccacgg 254
                |||| |||||||||||||||||||
Sbjct: 33373086 gccgcgccgcgacatgtaccacgg 33373063
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>gb|AY004316.1| Mus musculus VPS10 domain receptor protein SorCS2 (SorCS2) mRNA,
           complete cds
          Length = 5641

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gaggaggacaaggtgctggc 363
           ||||||||||||||||||||
Sbjct: 838 gaggaggacaaggtgctggc 857
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>ref|NM_030889.1| Mus musculus sortilin-related VPS10 domain containing receptor 2
           (Sorcs2), mRNA
          Length = 5641

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gaggaggacaaggtgctggc 363
           ||||||||||||||||||||
Sbjct: 838 gaggaggacaaggtgctggc 857
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 142     cgcgaccgcgacggcgacgg 161
               ||||||||||||||||||||
Sbjct: 3342320 cgcgaccgcgacggcgacgg 3342339
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>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0001B21
          Length = 143722

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   cgcgaccgcgacggcgacgg 161
             ||||||||||||||||||||
Sbjct: 57361 cgcgaccgcgacggcgacgg 57342
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>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1715_H01
          Length = 138733

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 231    gccgtgccgcgacatgtaccacgg 254
              |||| |||||||||||||||||||
Sbjct: 113836 gccgcgccgcgacatgtaccacgg 113813
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>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1316_E06
          Length = 110197

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 231  gccgtgccgcgacatgtaccacgg 254
            |||| |||||||||||||||||||
Sbjct: 3705 gccgcgccgcgacatgtaccacgg 3682
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>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0025J22
          Length = 175355

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    cgcgaccgcgacggcgacgg 161
              ||||||||||||||||||||
Sbjct: 143732 cgcgaccgcgacggcgacgg 143751
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>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from
             chromosome 4, complete sequence
          Length = 90825

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   cggcgctccgcgcgcagtgc 271
             ||||||||||||||||||||
Sbjct: 77491 cggcgctccgcgcgcagtgc 77472
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>dbj|AB093294.1| Mus musculus mRNA for mKIAA1329 protein
          Length = 5704

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gaggaggacaaggtgctggc 363
           ||||||||||||||||||||
Sbjct: 854 gaggaggacaaggtgctggc 873
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>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08,
             complete sequence
          Length = 118959

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   cggcgctccgcgcgcagtgc 271
             ||||||||||||||||||||
Sbjct: 22846 cggcgctccgcgcgcagtgc 22827
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>gb|M99606.1|HUMIGLAFB Human (clone K1B12L) Ig rearranged L-chain mRNA V-region, 5' end
          Length = 396

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 331 ggagctggtccaagaggaggacaaggtg 358
           ||||||||||| |||| |||||||||||
Sbjct: 138 ggagctggtcccagagcaggacaaggtg 111
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>gb|AF418087.1| Leucaena leucocephala subsp. glabrata clone a internal transcribed
           spacer 1, partial sequence; 5.8S ribosomal RNA gene,
           complete sequence; and internal transcribed spacer 2,
           partial sequence
          Length = 495

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 188 gccgtcccgcgctcgctcgcttcg 211
           ||||||| ||||||||||||||||
Sbjct: 102 gccgtccagcgctcgctcgcttcg 79
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>gb|AF418086.1| Leucaena leucocephala subsp. leucocephala clone a internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 495

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 188 gccgtcccgcgctcgctcgcttcg 211
           ||||||| ||||||||||||||||
Sbjct: 102 gccgtccagcgctcgctcgcttcg 79


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,059,211
Number of Sequences: 3902068
Number of extensions: 2059211
Number of successful extensions: 45743
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45082
Number of HSP's gapped (non-prelim): 658
length of query: 389
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 367
effective length of database: 17,147,199,772
effective search space: 6293022316324
effective search space used: 6293022316324
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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