>PFPI_PYRKO (Q5JGM7) Intracellular protease 1 (EC 3.2.-.-) (Intracellular|
           protease I)
          Length = 166

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 27/82 (32%), Positives = 37/82 (45%)
 Frame = +3

Query: 51  VLILCGDYMEDYEATVPLYALAALGVGVHCAAPGKSPGDACLTAVHDFLGYDLYTELPGH 230
           VLIL  D  ED E   PL+ +   G  V+ A+  +      +T  H   GY +  +L   
Sbjct: 3   VLILSADGFEDLELIYPLHRIKEEGHEVYVASFQRGK----ITGKH---GYTVNVDL--- 52

Query: 231 LFPMTAHFPADPASYDALVVPG 296
                A    DP  +DALV+PG
Sbjct: 53  -----AFDEVDPDEFDALVLPG 69

>DEGT_BACST (P15263) Pleiotropic regulatory protein|
          Length = 372

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
 Frame = +3

Query: 45  RNVLILCGDYMEDYEATVPLYALAALGVG-------VHCA--APGKSPGDACLTAVHDF 194
           R+   + GDY++  EA +  Y+ A  G+G       +H A  A G  PGD  +T    F
Sbjct: 28  RSSRFILGDYVKKLEADIAAYSRAKHGIGCGNGSDAIHIALQAAGVGPGDEVITTAFTF 86

>ELBB_SHIFL (P0ABU6) Enhancing lycopene biosynthesis protein 2|
          Length = 217

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
 Frame = +3

Query: 51  VLILCGDY--MEDYEATVPLYALAALGVGVHCAAPGKSPGDA-------CLTAVHDFLGY 203
           +L  CG Y   E +EA + L A++  G    C AP K   D         +T   + L  
Sbjct: 7   ILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVL-I 65

Query: 204 DLYTELPGHLFPMTAHFPADPASYDALVVPG 296
           +      G + P+     AD A  DAL+VPG
Sbjct: 66  EAARITRGEIRPLAQ---ADAAELDALIVPG 93

>ELBB_ECOLI (P0ABU5) Enhancing lycopene biosynthesis protein 2 (Sigma|
           cross-reacting protein 27A) (SCRP-27A)
          Length = 217

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
 Frame = +3

Query: 51  VLILCGDY--MEDYEATVPLYALAALGVGVHCAAPGKSPGDA-------CLTAVHDFLGY 203
           +L  CG Y   E +EA + L A++  G    C AP K   D         +T   + L  
Sbjct: 7   ILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVL-I 65

Query: 204 DLYTELPGHLFPMTAHFPADPASYDALVVPG 296
           +      G + P+     AD A  DAL+VPG
Sbjct: 66  EAARITRGEIRPLAQ---ADAAELDALIVPG 93

>PATR_STRAW (Q82FJ1) Putative phenylalanine aminotransferase (EC 2.6.1.-)|
          Length = 359

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
 Frame = +3

Query: 24  STMGSSSRNVLILCGDYMEDYEAT--VPLYALA----ALGVGVHCAAPGKSPGDACLTAV 185
           S++GS +R   + C   M +      VPL  LA    ++GV          PGD  + A 
Sbjct: 53  SSVGSFNRYPDMACSGLMSELSERFGVPLSHLATGTGSVGVAQQLLQATSGPGDEVIYAW 112

Query: 186 HDFLGYDLYTELPGHLFPMTAHFPADPASYDAL 284
             F  Y + T++ G         P D    DA+
Sbjct: 113 RSFEAYPIITQVSGATSVQVPLTPGDVHDLDAM 145

>GLNA_HALSA (Q9HNI2) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 454

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
 Frame = +3

Query: 99  PLYALAA-LGVGVHCAAPGKSPGDACLTAVHDFL-----GYDLYTELPGHLFPMTAHFPA 260
           P  ALAA +  G+        PGDA    +++F       Y + T LPGHL        +
Sbjct: 353 PYLALAAVIAAGLDGIDTDADPGDAVREDIYEFDEDKRDAYGIDT-LPGHLGDAVTALES 411

Query: 261 DPASYDAL 284
           DP   DAL
Sbjct: 412 DPVMQDAL 419

>SAM50_CAEEL (P46576) SAM50-like protein gop-3 (Gro-1 operon protein 3)|
          Length = 434

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 162 GDAC--LTAVHDFLGYDLYTELPGHLFPMTAHFPADPASYD 278
           GD C  ++A+  FLG+  Y+ +   L+   AH P + +  D
Sbjct: 143 GDHCFNISAIKPFLGWQKYSNVSATLYRSLAHMPWNQSDVD 183

>PFPI_PYRAB (Q9V1F8) Intracellular protease 1 (EC 3.2.-.-) (Intracellular|
           protease I)
          Length = 166

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 26/82 (31%), Positives = 35/82 (42%)
 Frame = +3

Query: 51  VLILCGDYMEDYEATVPLYALAALGVGVHCAAPGKSPGDACLTAVHDFLGYDLYTELPGH 230
           VLIL  D  ED E   P + L   G  V  A+  +      +T  H   GY +  +L   
Sbjct: 3   VLILSADQFEDVELIYPYHRLKEEGHEVLVASFKRG----VITGKH---GYTVNVDL--- 52

Query: 231 LFPMTAHFPADPASYDALVVPG 296
                A    +P  +DALV+PG
Sbjct: 53  -----AFEEVNPDEFDALVLPG 69

>PIN8_ARATH (Q9FFD0) Putative auxin efflux carrier component 8 (AtPIN8)|
          Length = 351

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 54  LILCGDYMEDYEATVPLYALAALGVG 131
           +I CGD  +  EA VPLY    LG G
Sbjct: 1   MINCGDVYKVIEAMVPLYVALILGYG 26

>SF3B1_XENLA (O57683) Splicing factor 3B subunit 1 (Spliceosome-associated|
           protein 155) (SAP 155) (SF3b155) (Pre-mRNA-splicing
           factor SF3b 155 kDa subunit) (146 kDa nuclear protein)
          Length = 1307

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -3

Query: 253 KWAVIGKR*PGSSV*RS*PRK--SWTAVRQASPGDLPGAAQWTPTPSAA 113
           +W   G + PGS+     P+K  SW    + +PG  P + +W  TP  A
Sbjct: 200 RWDQTGDQTPGST-----PKKLSSWDQA-EVTPGHTPSSLRWDETPGRA 242


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,493,298
Number of Sequences: 219361
Number of extensions: 727307
Number of successful extensions: 2572
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2570
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)