Clone Information

BLAST Search Result

Clone Name	bast71g05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RNF25_BOVIN (Q5E9N3) RING finger protein 25 (EC 6.3.2.-)	35	0.046
2	RNF25_HUMAN (Q96BH1) RING finger protein 25 (EC 6.3.2.-)	33	0.23
3	RIMB1_RAT (Q9JIR0) Peripheral-type benzodiazepine receptor-assoc...	32	0.30
4	BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)	32	0.30
5	BSN_MOUSE (O88737) Bassoon protein	31	0.67
6	EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400...	31	0.88
7	ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (E...	30	1.5
8	PTPA1_ASPOR (Q2UN27) Serine/threonine-protein phosphatase 2A act...	30	2.0
9	NDK3_ARATH (O49203) Nucleoside diphosphate kinase III, chloropla...	29	2.5
10	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	29	2.5
11	ABHD5_PONPY (Q5RBI4) Abhydrolase domain-containing protein 5	29	3.3
12	DBP9_NEUCR (Q7S6F3) ATP-dependent RNA helicase dbp-9 (EC 3.6.1.-)	29	3.3
13	Y3672_STRCO (P40180) Putative glycosyl transferase SCO3672 (EC 2...	28	4.3
14	DTBP1_MOUSE (Q91WZ8) Dystrobrevin-binding protein 1 (Dysbindin) ...	28	4.3
15	ABHD5_HUMAN (Q8WTS1) Abhydrolase domain-containing protein 5	28	4.3
16	ZN672_HUMAN (Q499Z4) Zinc finger protein 672	28	4.3
17	GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (G...	28	5.7
18	RRS1_MOUSE (Q9CYH6) Ribosome biogenesis regulatory protein homolog	28	5.7
19	CALCR_HUMAN (P30988) Calcitonin receptor precursor (CT-R)	28	5.7
20	ANDR_RANCA (Q7T1K4) Androgen receptor (Dihydrotestosterone recep...	28	5.7
21	7UP1_DROME (P16375) Steroid receptor seven-up, isoforms B/C	28	7.4
22	PGCB_RAT (P55068) Brevican core protein precursor (Brain-enriche...	28	7.4
23	7UP2_DROME (P16376) Steroid receptor seven-up, isoform A	28	7.4
24	EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400...	28	7.4
25	Y24K_STRGR (P12752) Hypothetical 24.7 kDa protein in photolyase ...	28	7.4
26	ATG26_CRYNE (Q5KK25) Sterol 3-beta-glucosyltransferase (EC 2.4.1...	28	7.4
27	CK021_HUMAN (Q9P2W6) Protein C11orf21	28	7.4
28	NMDE3_MOUSE (Q01098) Glutamate [NMDA] receptor subunit epsilon 3...	27	9.7
29	IF2_MYCTU (P65131) Translation initiation factor IF-2	27	9.7
30	IF2_MYCBO (P65132) Translation initiation factor IF-2	27	9.7
31	SDE3_ARATH (Q8GYD9) Probable RNA helicase SDE3 (EC 3.6.1.-) (Sil...	27	9.7
32	LP61_EIMTE (P15714) Antigen LPMC-61 (Fragment)	27	9.7
33	APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa...	27	9.7
34	HORN_HUMAN (Q86YZ3) Hornerin	27	9.7
35	BSN_RAT (O88778) Bassoon protein	27	9.7
36	TY3H_DROME (P18459) Tyrosine 3-monooxygenase (EC 1.14.16.2) (Tyr...	27	9.7
37	ODO2_BARQU (Q6FYD4) Dihydrolipoyllysine-residue succinyltransfer...	27	9.7
38	KI10A_DROME (Q960Z0) Kinesin-like protein Klp10A (Kinesin-like p...	27	9.7
39	ZN553_MOUSE (Q3US17) Zinc finger protein 553	27	9.7

>RNF25_BOVIN (Q5E9N3) RING finger protein 25 (EC 6.3.2.-)|
          Length = 458

 Score = 35.0 bits (79), Expect = 0.046
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = +1

Query: 34  DSHSQGEKGERGEWLQGWW---PPAGSRWCAPWRTSWPRRPARLSGRLPSPSASAGTTPA 204
           +SH+QG KG   +   G W   PP  +R CA W  +  R PA    RLP    +    P 
Sbjct: 387 ESHNQGGKGPPQDKGPGEWQGPPPRRTRDCAHWERAKNRTPASSYPRLPRGRGAYRPGPR 446

Query: 205 R 207
           R
Sbjct: 447 R 447

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>RNF25_HUMAN (Q96BH1) RING finger protein 25 (EC 6.3.2.-)|
          Length = 459

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +1

Query: 10  QNPETSEQDSHSQGEKGERGEWLQGWW---PPAGSRWCAPWRTSWPRRPARLSGRLP 171
           + P   + + HSQG +G   E   G W   PP  +R C  W  S  R P     RLP
Sbjct: 380 KEPMDLKPEPHSQGVEGPPQEKGPGSWQGPPPRRTRDCVRWERSKGRTPGSSYPRLP 436

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>RIMB1_RAT (Q9JIR0) Peripheral-type benzodiazepine receptor-associated protein|
           1 (PRAX-1) (RIM-binding protein 1) (RIM-BP1)
          Length = 1847

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = +3

Query: 18  RNIRARQSQSGREGRAW---RMASRVVASSRIPLVRAMENLLAASSGPALRPAAVSVGVR 188
           R ++AR S  G+EG  W   R   R++  S+  ++R    +   +    LRPA       
Sbjct: 238 RELQARLSLVGKEGPQWLHMRDFDRLLRESQREVLRLQRQIALRNQREPLRPARSQGSTA 297

Query: 189 GYNAGAPLRSHDRDEALED 245
             + GAP      +  LED
Sbjct: 298 PSSVGAPAPGAPGETVLED 316

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>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +1

Query: 4   RQQNPETSEQDSHSQGEKGERGEWLQGWWPPAGSRWCAPWRTSWPRRPARLSGRLPSPSA 183
           R  +P   +  + + G +  R    QG   PAG     P RT       + SGR PS S 
Sbjct: 89  RAASPTPKQASATTPGHESPRETRAQG---PAGQEADGPRRTLQVDSRTQRSGRSPSVSP 145

Query: 184 SAGTTPARP 210
             G+TP  P
Sbjct: 146 DRGSTPTSP 154

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>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = +1

Query: 4   RQQNPETSEQDSHSQGEKGERGEWLQGWWPPAGSRWCAPWRTSWPRRPARLSGRLPSPSA 183
           R  +P   +  + + G +  R    QG   P+G    +P RT       + SGR PS S 
Sbjct: 86  RTTSPTPKQASATAPGRESPRETRAQG---PSGQEAESPRRTLQVDSRTQRSGRSPSVSP 142

Query: 184 SAGTTPARP 210
             G+TP  P
Sbjct: 143 DRGSTPTSP 151

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>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
           SWI2/SNF2-related protein) (Domino homolog) (hDomino)
           (CAG repeat protein 32) (Trinucleotide repeat-containing
           gene 12 protein)
          Length = 3160

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = +2

Query: 2   QGSKIQ-KHPSKTVTVRERRESVENGFKGGGLQ----QDPAGA 115
           QG+++Q +HP   +TVRERR S  +   GG +     Q PA A
Sbjct: 203 QGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAAA 245

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>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein|
           0) (EP0)
          Length = 410

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
 Frame = +1

Query: 7   QQNPETSEQDSHSQGEKGERGEWLQGWWPPAGSRWCAPWRTSWPRRPARLSGRLPSPSAS 186
           Q   ET E  S  +G   + G    G  P  GS   A    S P      S R PSPSAS
Sbjct: 319 QAQGETPEAPSSGEGSSAQHGASGAGAGP--GSANTAASARSSPSSSPSSSMRRPSPSAS 376

Query: 187 AGTTPA----RPSAATTG 228
           A  T A     P+++++G
Sbjct: 377 APETAAPRGGPPASSSSG 394

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>PTPA1_ASPOR (Q2UN27) Serine/threonine-protein phosphatase 2A activator 1 (EC|
           5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1)
           (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl
           phosphatase activator 1)
          Length = 478

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = +1

Query: 91  PPAGSRWCAPWRTSWPRRPARLSGRLPSPSASAGTTPARPSAAT 222
           PP  +   APW TS   R    + R+PS        P  P A T
Sbjct: 406 PPPSTGTAAPWATSRAGREPPTTSRIPSALPDTSRLPPGPMAPT 449

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>NDK3_ARATH (O49203) Nucleoside diphosphate kinase III,|
           chloroplast/mitochondrial precursor (EC 2.7.4.6) (NDK
           III) (NDP kinase III) (NDPK III)
          Length = 238

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 24/68 (35%), Positives = 33/68 (48%)
 Frame = +3

Query: 3   KAAKSRNIRARQSQSGREGRAWRMASRVVASSRIPLVRAMENLLAASSGPALRPAAVSVG 182
           KAAKS    A+ ++   EGRA   A+ V AS +IPL  +     A SSG  +   +   G
Sbjct: 11  KAAKSLLSSAKNARFFSEGRAIGAAAAVSASGKIPLYASN---FARSSGSGVASKSWITG 67

Query: 183 VRGYNAGA 206
           +    A A
Sbjct: 68  LLALPAAA 75

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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = +1

Query: 58  GERGEWLQGWWPPAGSRWCAPWRTSWPRRP--ARLSGRLPSPSASAGTTPARPSAA 219
           G R    QG   P G R   P   S P RP    +  R P P  SAG  P RP  A
Sbjct: 228 GPRPAAAQGGPRPGGPR---PSPGSMPPRPNPGAMPQRTPRPGPSAGGRPGRPGGA 280

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>ABHD5_PONPY (Q5RBI4) Abhydrolase domain-containing protein 5|
          Length = 349

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 25  SEQDSHSQGEKGERGEWLQGWWPPAGSRWCAPWRTS 132
           +E++     + GER  WL GW P     WC P  TS
Sbjct: 3   AEEEEVDSADTGERSGWLTGWLP----TWC-PTSTS 33

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>DBP9_NEUCR (Q7S6F3) ATP-dependent RNA helicase dbp-9 (EC 3.6.1.-)|
          Length = 676

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 212 EGRAGVVPADADGDGSRPESRAGRRGQEVLHGAHQRDPAG 93
           E + G VP    GD  +   + G +G +  HG +++ P G
Sbjct: 625 ETQIGFVPFKKQGDDKKTRGKKGAKGGKGGHGKYKKGPGG 664

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>Y3672_STRCO (P40180) Putative glycosyl transferase SCO3672 (EC 2.-.-.-)|
          Length = 411

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
 Frame = +3

Query: 12  KSRNIRARQSQSGREGRAWRMASR---VVASSRIPLVRAMENLLAASSGPALR----PAA 170
           +   +RA   ++GR  RAW +  R    +  +R  + +A      A+ G + R    P  
Sbjct: 333 RGAGVRAPVRRAGRGARAWAVVRRPRTAMRRARAGVSQAPRGATGAAGGASFRAAIFPVR 392

Query: 171 VSVGVRGYNAGAPLR 215
            +        GAPLR
Sbjct: 393 QATSTENVQVGAPLR 407

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>DTBP1_MOUSE (Q91WZ8) Dystrobrevin-binding protein 1 (Dysbindin)|
           (Hermansky-Pudlak syndrome 7 protein homolog)
          Length = 352

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1

Query: 154 LSGRLPSPSASAGTTPARPSAAT 222
           +S ++PSPS SA   PA PSA T
Sbjct: 281 MSLQIPSPSESASQPPASPSACT 303

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>ABHD5_HUMAN (Q8WTS1) Abhydrolase domain-containing protein 5|
          Length = 349

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 25  SEQDSHSQGEKGERGEWLQGWWPPAGSRWC 114
           +E++     + GER  WL GW P     WC
Sbjct: 3   AEEEEVDSADTGERSGWLTGWLP----TWC 28

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>ZN672_HUMAN (Q499Z4) Zinc finger protein 672|
          Length = 452

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 21/67 (31%), Positives = 30/67 (44%)
 Frame = +3

Query: 27  RARQSQSGREGRAWRMASRVVASSRIPLVRAMENLLAASSGPALRPAAVSVGVRGYNAGA 206
           R RQ    R  R   + +R    S +   +A  + L  +S PA  P   +   R + +GA
Sbjct: 118 RRRQHLPERPRRC-PLCARTFRQSALLFHQARAHPLGTTSDPAAPPHRCAQCPRAFRSGA 176

Query: 207 PLRSHDR 227
            LRSH R
Sbjct: 177 GLRSHPR 183

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>GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 454

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 11  KIQKHPSKTVTVRERRESVENGFKGGGLQQDPAGARHG-EPPGRVVR 148
           K+Q+ P ++    E R   E+G +   L++ P G   G EPPGR +R
Sbjct: 51  KMQRTPQESA---EGRTPPEHGLRQKDLRRRPPGQHQGQEPPGRGLR 94

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>RRS1_MOUSE (Q9CYH6) Ribosome biogenesis regulatory protein homolog|
          Length = 365

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 50  ERRESVENGFKGGGLQQDPAGARHGEPPGR 139
           +RR+  + G + GG +Q P+G R G PPG+
Sbjct: 302 KRRKMSQKGKRKGG-RQGPSGKRKGGPPGQ 330

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>CALCR_HUMAN (P30988) Calcitonin receptor precursor (CT-R)|
          Length = 490

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 121 WRTSWPRRPARLSGRLPSPSASAGTTP 201
           W   W RRP+  S R  + +A AG  P
Sbjct: 429 WNQRWGRRPSNRSARAAAAAAEAGDIP 455

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>ANDR_RANCA (Q7T1K4) Androgen receptor (Dihydrotestosterone receptor) (bfAR)|
          Length = 777

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 141 TRPGGSPWRAPAGSCWRPPPLKP 73
           T   G+PWR P G+   PPP  P
Sbjct: 67  TEVRGTPWREPQGAQPDPPPCSP 89

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>7UP1_DROME (P16375) Steroid receptor seven-up, isoforms B/C|
          Length = 543

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +1

Query: 118 PWRTSWPRRPARLSGRLPSPSASAGTTPARPSAATTG 228
           P  ++W   PA L G L + SA  GTT    S AT G
Sbjct: 38  PPHSAWHEPPASLGGHLHAASAGPGTTTG--SVATGG 72

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>PGCB_RAT (P55068) Brevican core protein precursor (Brain-enriched|
           hyaluronan-binding protein) (BEHAB protein) [Contains:
           Brevican core protein isoform 1; Brevican core protein
           isoform 2]
          Length = 883

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 109 WCAPWRTSWPRRPARLSGRLPSPSASAGTTPARPSAATT 225
           W AP  +  PRRPAR    + +P    G  P +  A  T
Sbjct: 840 WEAPQISCVPRRPARALRSMTAPEGPRGQLPRQRKALLT 878

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>7UP2_DROME (P16376) Steroid receptor seven-up, isoform A|
          Length = 746

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +1

Query: 118 PWRTSWPRRPARLSGRLPSPSASAGTTPARPSAATTG 228
           P  ++W   PA L G L + SA  GTT    S AT G
Sbjct: 38  PPHSAWHEPPASLGGHLHAASAGPGTTTG--SVATGG 72

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>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
           SWI2/SNF2-related protein) (Domino homolog) (mDomino)
          Length = 3072

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = +2

Query: 2   QGSKIQ-KHPSKTVTVRERRESVENGFKGGGLQ----QDPAGA 115
           QG+++Q +H    +TVRERR S  +   GG +     Q PA A
Sbjct: 202 QGAQVQLQHSGAPITVRERRLSQPHAQSGGTIHHLGPQSPAAA 244

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>Y24K_STRGR (P12752) Hypothetical 24.7 kDa protein in photolyase 5'region|
          Length = 238

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +1

Query: 94  PAGSRWCAPWRTSWPRRPARLSGRLPSP--SASAGTTPARPSAAT 222
           P G+   A WRT+ P  P R     P P  SAS    P R S AT
Sbjct: 9   PNGTSSSATWRTARP-APRRCGSCRPPPPGSASPSPRPRRASCAT 52

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>ATG26_CRYNE (Q5KK25) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
           (Autophagy-related protein 26)
          Length = 1585

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +1

Query: 91  PPAGSRWCAPWRTSWPRRPA-RLSGRLPSPS--ASAGTTPARPSAATT 225
           PP+ +     WR SW R+PA +L G  PS S  +  G  P   S   T
Sbjct: 720 PPSMNDDARNWRPSWIRKPASKLFGSSPSGSFVSHPGRLPTDSSTTVT 767

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>CK021_HUMAN (Q9P2W6) Protein C11orf21|
          Length = 132

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +1

Query: 100 GSRWCAPWRTSWPRRPARLSG--RLPSPSASAGTTPARPSAATTG 228
           G  WC  WR    RRP R S   R P  S+ +G  P      T G
Sbjct: 2   GRTWCGMWRR---RRPGRRSAVPRWPHLSSQSGVEPPDRWTGTPG 43

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>NMDE3_MOUSE (Q01098) Glutamate [NMDA] receptor subunit epsilon 3 precursor|
            (N-methyl D-aspartate receptor subtype 2C) (NR2C)
            (NMDAR2C)
          Length = 1239

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = +1

Query: 4    RQQNPETSEQDSHSQGEKGERGEWLQGWWPPAGSRWCAPWRTSW-PRRPARLSGRLPSPS 180
            R   P TS   S + G  G+      GW PP G R     R    P RPA  +G  P P 
Sbjct: 928  RAPAPTTSGPRSCTPGPPGQPSP--SGWRPPGGGRTPLARRAPQPPARPATCAGS-PQPD 984

Query: 181  AS 186
             S
Sbjct: 985  VS 986

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>IF2_MYCTU (P65131) Translation initiation factor IF-2|
          Length = 900

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
 Frame = +1

Query: 136 PRRPARLSGR----LPSPSASAGTTPARPSAATTG 228
           PR PA   G     +P P AS G+ P RP  A  G
Sbjct: 168 PRPPAPRPGTARPGVPRPGASPGSMPPRPGGAVGG 202

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>IF2_MYCBO (P65132) Translation initiation factor IF-2|
          Length = 900

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
 Frame = +1

Query: 136 PRRPARLSGR----LPSPSASAGTTPARPSAATTG 228
           PR PA   G     +P P AS G+ P RP  A  G
Sbjct: 168 PRPPAPRPGTARPGVPRPGASPGSMPPRPGGAVGG 202

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>SDE3_ARATH (Q8GYD9) Probable RNA helicase SDE3 (EC 3.6.1.-) (Silencing|
           defective protein 3)
          Length = 1002

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
 Frame = +1

Query: 7   QQNPETSEQDSH--SQGEKGERGEWLQGWWPPAGSRWCAPWRTSW 135
           Q  PE    +S   + G   E GEW  GW    G++    W   W
Sbjct: 844 QYPPEAEWNNSGELNNGGANENGEWSDGWNNNGGTKEKNEWSDGW 888

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>LP61_EIMTE (P15714) Antigen LPMC-61 (Fragment)|
          Length = 255

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +1

Query: 4   RQQNPETSEQDSHSQGEKGERGEWLQGWWPPAGSRWCAPWRTSWPRR 144
           +QQ PE  EQ    Q  + ++ +W          +W A  +  WP++
Sbjct: 150 QQQWPEQPEQQQQQQWPEQQQQQWSDQNQQQQAQQWQAQQQQQWPQQ 196

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>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor|
           (45/47 kDa antigen) (Fibronectin attachment protein)
           (FAP-A)
          Length = 381

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
 Frame = +1

Query: 70  EWLQGWWPPAGSRWCAPWRTSWPRRPARLSGRLPSPSASAG---TTPARPSAATTG 228
           E +Q W PP       P     P  PA  +   P+P A A    T PA P+ A  G
Sbjct: 296 ESIQAWTPPPAP----PAAPGGPGAPAPGAPGAPAPGAPAAPGVTAPAAPAPAAPG 347

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>HORN_HUMAN (Q86YZ3) Hornerin|
          Length = 2850

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 56  RESVENGFKGGGLQQDPAGARHGEPPG 136
           R+S+ +G +G G +Q P+  RHG   G
Sbjct: 291 RQSLGHGRQGSGSRQSPSHVRHGSGSG 317

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>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 20/69 (28%), Positives = 28/69 (40%)
 Frame = +1

Query: 4   RQQNPETSEQDSHSQGEKGERGEWLQGWWPPAGSRWCAPWRTSWPRRPARLSGRLPSPSA 183
           R  +P   +  + + G +  R    QG    +G     P RT       + SGR PS S 
Sbjct: 86  RATSPTPKQASATAPGRESPRETRAQGL---SGQEAEGPRRTLQVDSRTQRSGRSPSVSP 142

Query: 184 SAGTTPARP 210
             G+TP  P
Sbjct: 143 DRGSTPTSP 151

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>TY3H_DROME (P18459) Tyrosine 3-monooxygenase (EC 1.14.16.2) (Tyrosine|
           3-hydroxylase) (TH) (Protein Pale)
          Length = 579

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 81  RVVASSRIPLVRAMENLLAASSGPALRPAAVSVGVRGYNAGAPLR 215
           ++   +R+P ++ M + L  ++G +LRPAA  +  R + A    R
Sbjct: 341 QIFVETRLPQLQEMSDFLRKNTGFSLRPAAGLLTARDFLASLAFR 385

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>ODO2_BARQU (Q6FYD4) Dihydrolipoyllysine-residue succinyltransferase component|
           of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
           (E2) (Dihydrolipoamide succinyltransferase component of
           2-oxoglutarate dehydrogenase complex)
          Length = 410

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 115 APWRTSWPRRPARLSGRLPSPSASAGTTPARPSAA 219
           +P  TS P  P+ L     S +  +GT P  PSAA
Sbjct: 88  SPSATSIPEAPSELEQSPSSSATPSGTMPPAPSAA 122

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>KI10A_DROME (Q960Z0) Kinesin-like protein Klp10A (Kinesin-like protein at|
           cytological position 10A)
          Length = 805

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = +3

Query: 27  RARQSQSGREGRAWRMASRVVASSRIPLVRAMENLLAASSGPALRPAAVSVGVRGYNAGA 206
           R R SQ+    +  R+AS  V ++ +P   A     AAS+GPA +  A +   +G    +
Sbjct: 153 RPRYSQAATGQQQTRIAS-AVPNNTLPNPSA-----AASAGPAAQGVATAATTQGAGGAS 206

Query: 207 PLRSH 221
             RSH
Sbjct: 207 TRRSH 211

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>ZN553_MOUSE (Q3US17) Zinc finger protein 553|
          Length = 591

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 29  SKTVTVRERRESVENGFKGGGLQQDPAGARHGEPP 133
           S ++T R    S +  F   GL+ +P G + GEPP
Sbjct: 380 SPSLTPRSPSHSSDGPFGLPGLEPEPGGPQAGEPP 414


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.125    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,778,528
Number of Sequences: 219361
Number of extensions: 783239
Number of successful extensions: 3157
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3156
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result