| Clone Name | bast71f04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB076982.1| Avena sativa AsHHT3 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 3, complete cds Length = 1659 Score = 466 bits (235), Expect = e-128 Identities = 355/395 (89%) Strand = Plus / Plus Query: 55 cccgtcccacccgcacatcgagtaccagcccgcgcccgccatgctggactcggaggagcc 114 |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 603 cccgacccacccgcacatcgagtaccagcccgcgcccgccatgctgggctcggaggagcc 662 Query: 115 gcaggccctcaccgccaagccggaagcgccacccacggctgtggacatcttcaagctgtg 174 ||| |||||| ||| |||||| || |||| |||||||| ||||||||||||||||||| Sbjct: 663 gcaagccctcgccggcaagccagagtcgccgcccacggccgtggacatcttcaagctgtc 722 Query: 175 ccgcgccgacctcggccgcctccgcgcccagctccccacgggcgagggcgcgccgcggtt 234 |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 723 ccgctccgacctgggccggctccgcgcccagctccccacgggcgagggcgcgccacggtt 782 Query: 235 cagcacctacgcggtgctcggggcgcacgtgtggcggtgcgcgtccctggcccgtggcct 294 |||||| ||||||||||||||||| |||||||||||||||||||||||||| || || || Sbjct: 783 cagcacgtacgcggtgctcggggctcacgtgtggcggtgcgcgtccctggcgcgcgggct 842 Query: 295 gtccccagagcagcccaccaagctatactgcgccacggacgggcggcagcggctgcagcc 354 | |||| |||||||| |||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 843 ggccccggagcagccaaccaagctgtactgcgccacggacgggcggcagcggctgacgcc 902 Query: 355 cgcgctcccggagggctacttcggcaacgtcatcttcaccgccacgccgctcgcggtggc 414 | || || || || |||||||| |||||||||||||| |||||||||||||| | ||| Sbjct: 903 gacccttcctgacggttacttcgggaacgtcatcttcacggccacgccgctcgccgaggc 962 Query: 415 gggcagggtgactggctcgctggcggacggcgcga 449 ||||| |||||| ||||||||||||||||| |||| Sbjct: 963 gggcaaggtgaccggctcgctggcggacggtgcga 997
>dbj|AB076980.1| Avena sativa AsHHT1 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 1, complete cds Length = 1755 Score = 448 bits (226), Expect = e-123 Identities = 349/390 (89%) Strand = Plus / Plus Query: 60 cccacccgcacatcgagtaccagcccgcgcccgccatgctggactcggaggagccgcagg 119 |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| || | Sbjct: 735 cccacccgcacatcgagtaccagcccgcccccgccatgctgggctctgaggagccacaag 794 Query: 120 ccctcaccgccaagccggaagcgccacccacggctgtggacatcttcaagctgtgccgcg 179 ||||| ||| |||||| || |||| |||||||| ||||||||||||||||||| |||| Sbjct: 795 ccctcgccggcaagccagagtcgccgcccacggccgtggacatcttcaagctgtcccgct 854 Query: 180 ccgacctcggccgcctccgcgcccagctccccacgggcgagggcgcgccgcggttcagca 239 ||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 855 ccgacctgggccggctccgtgcccagctccccacgggcgagggcgcgccacggttcagca 914 Query: 240 cctacgcggtgctcggggcgcacgtgtggcggtgcgcgtccctggcccgtggcctgtccc 299 | ||||||||||||||||| |||||||||||||||||||||||||| || || ||| ||| Sbjct: 915 cgtacgcggtgctcggggctcacgtgtggcggtgcgcgtccctggcgcgcgggctggccc 974 Query: 300 cagagcagcccaccaagctatactgcgccacggacgggcggcagcggctgcagcccgcgc 359 | |||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||| Sbjct: 975 cggagcagccaaccaagctgtactgcgccacggacgggcggcagcggctgacgccgacgc 1034 Query: 360 tcccggagggctacttcggcaacgtcatcttcaccgccacgccgctcgcggtggcgggca 419 ||| || || ||||||||||||||||||||||| |||||||||||||| | |||||||| Sbjct: 1035 accctgacgggtacttcggcaacgtcatcttcacggccacgccgctcgccgaggcgggca 1094 Query: 420 gggtgactggctcgctggcggacggcgcga 449 |||||| ||||||||||||||||| |||| Sbjct: 1095 aggtgaccggctcgctggcggacggggcga 1124
>dbj|AB076981.1| Avena sativa AsHHT2 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 2, complete cds Length = 1770 Score = 442 bits (223), Expect = e-121 Identities = 352/395 (89%) Strand = Plus / Plus Query: 55 cccgtcccacccgcacatcgagtaccagcccgcgcccgccatgctggactcggaggagcc 114 |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 750 cccgacccacccgcacatcgagtaccagcccgcgcccgccatgctgggctcggaggagcc 809 Query: 115 gcaggccctcaccgccaagccggaagcgccacccacggctgtggacatcttcaagctgtg 174 ||| ||||| ||| ||||||||| |||| ||||| || ||||||||||||||||||| Sbjct: 810 gcaagcccttgccggcaagccggagtcgccgcccacagccgtggacatcttcaagctgtc 869 Query: 175 ccgcgccgacctcggccgcctccgcgcccagctccccacgggcgagggcgcgccgcggtt 234 |||| | ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 870 ccgctctgacctgggccggctccgcgcccagctccccacgggcgagggtgcgccgcggtt 929 Query: 235 cagcacctacgcggtgctcggggcgcacgtgtggcggtgcgcgtccctggcccgtggcct 294 |||||| ||||||||||||||||| ||||||||||||||||||||| |||| || || || Sbjct: 930 cagcacgtacgcggtgctcggggctcacgtgtggcggtgcgcgtccatggcacgcgggct 989 Query: 295 gtccccagagcagcccaccaagctatactgcgccacggacgggcggcagcggctgcagcc 354 | |||| |||||||| |||||||| |||||||| ||||||||||||||||||||| ||| Sbjct: 990 ggccccggagcagccaaccaagctgtactgcgcaacggacgggcggcagcggctgacgcc 1049 Query: 355 cgcgctcccggagggctacttcggcaacgtcatcttcaccgccacgccgctcgcggtggc 414 | ||||| || || ||||||||||| | |||||||||||||||||||||||| | ||| Sbjct: 1050 gaccctccctgatggatacttcggcaatgccatcttcaccgccacgccgctcgccgaggc 1109 Query: 415 gggcagggtgactggctcgctggcggacggcgcga 449 ||||| |||||| ||||||||||| |||||||||| Sbjct: 1110 gggcaaggtgaccggctcgctggcagacggcgcga 1144
>ref|XM_466682.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1671 Score = 367 bits (185), Expect = 2e-98 Identities = 341/393 (86%) Strand = Plus / Plus Query: 56 ccgtcccacccgcacatcgagtaccagcccgcgcccgccatgctggactcggaggagccg 115 ||||| ||||||||| ||||||||||||| |||||||||||||||| | | ||| |||| Sbjct: 711 ccgtcgcacccgcacgtcgagtaccagccggcgcccgccatgctggcccccgagccgccg 770 Query: 116 caggccctcaccgccaagccggaagcgccacccacggctgtggacatcttcaagctgtgc 175 ||||| || ||||||||||||| |||| ||||| || ||||||||||||||||||| | Sbjct: 771 caggcgctgaccgccaagccggcgccgccgcccaccgccgtggacatcttcaagctgtcc 830 Query: 176 cgcgccgacctcggccgcctccgcgcccagctccccacgggcgagggcgcgccgcggttc 235 ||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||| | Sbjct: 831 cgctccgacctcggccgcctccggtcccagctgccccgcggcgagggcgcgccgcggtac 890 Query: 236 agcacctacgcggtgctcggggcgcacgtgtggcggtgcgcgtccctggcccgtggcctg 295 ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || || || Sbjct: 891 agcacgtacgcggtgctcgcggcgcacgtgtggcggtgcgcgtcgctggcgcgggggctc 950 Query: 296 tccccagagcagcccaccaagctatactgcgccacggacgggcggcagcggctgcagccc 355 || | ||||||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 951 cccgcggagcagcccaccaagctgtactgcgccacggacggacgccagcggctgcagccg 1010 Query: 356 gcgctcccggagggctacttcggcaacgtcatcttcaccgccacgccgctcgcggtggcg 415 |||| || || ||||||||||||||||| |||||||| || ||||||||||| | ||| Sbjct: 1011 tcgctgcccgacggctacttcggcaacgtgatcttcacggcgacgccgctcgccgaggcc 1070 Query: 416 ggcagggtgactggctcgctggcggacggcgcg 448 || |||||||| || |||||||||||||||||| Sbjct: 1071 gggagggtgaccgggtcgctggcggacggcgcg 1103
>ref|XM_506864.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_A05.15 mRNA Length = 1716 Score = 367 bits (185), Expect = 2e-98 Identities = 341/393 (86%) Strand = Plus / Plus Query: 56 ccgtcccacccgcacatcgagtaccagcccgcgcccgccatgctggactcggaggagccg 115 ||||| ||||||||| ||||||||||||| |||||||||||||||| | | ||| |||| Sbjct: 711 ccgtcgcacccgcacgtcgagtaccagccggcgcccgccatgctggcccccgagccgccg 770 Query: 116 caggccctcaccgccaagccggaagcgccacccacggctgtggacatcttcaagctgtgc 175 ||||| || ||||||||||||| |||| ||||| || ||||||||||||||||||| | Sbjct: 771 caggcgctgaccgccaagccggcgccgccgcccaccgccgtggacatcttcaagctgtcc 830 Query: 176 cgcgccgacctcggccgcctccgcgcccagctccccacgggcgagggcgcgccgcggttc 235 ||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||| | Sbjct: 831 cgctccgacctcggccgcctccggtcccagctgccccgcggcgagggcgcgccgcggtac 890 Query: 236 agcacctacgcggtgctcggggcgcacgtgtggcggtgcgcgtccctggcccgtggcctg 295 ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || || || Sbjct: 891 agcacgtacgcggtgctcgcggcgcacgtgtggcggtgcgcgtcgctggcgcgggggctc 950 Query: 296 tccccagagcagcccaccaagctatactgcgccacggacgggcggcagcggctgcagccc 355 || | ||||||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 951 cccgcggagcagcccaccaagctgtactgcgccacggacggacgccagcggctgcagccg 1010 Query: 356 gcgctcccggagggctacttcggcaacgtcatcttcaccgccacgccgctcgcggtggcg 415 |||| || || ||||||||||||||||| |||||||| || ||||||||||| | ||| Sbjct: 1011 tcgctgcccgacggctacttcggcaacgtgatcttcacggcgacgccgctcgccgaggcc 1070 Query: 416 ggcagggtgactggctcgctggcggacggcgcg 448 || |||||||| || |||||||||||||||||| Sbjct: 1071 gggagggtgaccgggtcgctggcggacggcgcg 1103
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 367 bits (185), Expect = 2e-98 Identities = 341/393 (86%) Strand = Plus / Plus Query: 56 ccgtcccacccgcacatcgagtaccagcccgcgcccgccatgctggactcggaggagccg 115 ||||| ||||||||| ||||||||||||| |||||||||||||||| | | ||| |||| Sbjct: 24103003 ccgtcgcacccgcacgtcgagtaccagccggcgcccgccatgctggcccccgagccgccg 24103062 Query: 116 caggccctcaccgccaagccggaagcgccacccacggctgtggacatcttcaagctgtgc 175 ||||| || ||||||||||||| |||| ||||| || ||||||||||||||||||| | Sbjct: 24103063 caggcgctgaccgccaagccggcgccgccgcccaccgccgtggacatcttcaagctgtcc 24103122 Query: 176 cgcgccgacctcggccgcctccgcgcccagctccccacgggcgagggcgcgccgcggttc 235 ||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||| | Sbjct: 24103123 cgctccgacctcggccgcctccggtcccagctgccccgcggcgagggcgcgccgcggtac 24103182 Query: 236 agcacctacgcggtgctcggggcgcacgtgtggcggtgcgcgtccctggcccgtggcctg 295 ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || || || Sbjct: 24103183 agcacgtacgcggtgctcgcggcgcacgtgtggcggtgcgcgtcgctggcgcgggggctc 24103242 Query: 296 tccccagagcagcccaccaagctatactgcgccacggacgggcggcagcggctgcagccc 355 || | ||||||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 24103243 cccgcggagcagcccaccaagctgtactgcgccacggacggacgccagcggctgcagccg 24103302 Query: 356 gcgctcccggagggctacttcggcaacgtcatcttcaccgccacgccgctcgcggtggcg 415 |||| || || ||||||||||||||||| |||||||| || ||||||||||| | ||| Sbjct: 24103303 tcgctgcccgacggctacttcggcaacgtgatcttcacggcgacgccgctcgccgaggcc 24103362 Query: 416 ggcagggtgactggctcgctggcggacggcgcg 448 || |||||||| || |||||||||||||||||| Sbjct: 24103363 gggagggtgaccgggtcgctggcggacggcgcg 24103395
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 367 bits (185), Expect = 2e-98 Identities = 341/393 (86%) Strand = Plus / Plus Query: 56 ccgtcccacccgcacatcgagtaccagcccgcgcccgccatgctggactcggaggagccg 115 ||||| ||||||||| ||||||||||||| |||||||||||||||| | | ||| |||| Sbjct: 61744 ccgtcgcacccgcacgtcgagtaccagccggcgcccgccatgctggcccccgagccgccg 61803 Query: 116 caggccctcaccgccaagccggaagcgccacccacggctgtggacatcttcaagctgtgc 175 ||||| || ||||||||||||| |||| ||||| || ||||||||||||||||||| | Sbjct: 61804 caggcgctgaccgccaagccggcgccgccgcccaccgccgtggacatcttcaagctgtcc 61863 Query: 176 cgcgccgacctcggccgcctccgcgcccagctccccacgggcgagggcgcgccgcggttc 235 ||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||| | Sbjct: 61864 cgctccgacctcggccgcctccggtcccagctgccccgcggcgagggcgcgccgcggtac 61923 Query: 236 agcacctacgcggtgctcggggcgcacgtgtggcggtgcgcgtccctggcccgtggcctg 295 ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || || || Sbjct: 61924 agcacgtacgcggtgctcgcggcgcacgtgtggcggtgcgcgtcgctggcgcgggggctc 61983 Query: 296 tccccagagcagcccaccaagctatactgcgccacggacgggcggcagcggctgcagccc 355 || | ||||||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 61984 cccgcggagcagcccaccaagctgtactgcgccacggacggacgccagcggctgcagccg 62043 Query: 356 gcgctcccggagggctacttcggcaacgtcatcttcaccgccacgccgctcgcggtggcg 415 |||| || || ||||||||||||||||| |||||||| || ||||||||||| | ||| Sbjct: 62044 tcgctgcccgacggctacttcggcaacgtgatcttcacggcgacgccgctcgccgaggcc 62103 Query: 416 ggcagggtgactggctcgctggcggacggcgcg 448 || |||||||| || |||||||||||||||||| Sbjct: 62104 gggagggtgaccgggtcgctggcggacggcgcg 62136
>dbj|AK104319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-E04, full insert sequence Length = 1671 Score = 367 bits (185), Expect = 2e-98 Identities = 341/393 (86%) Strand = Plus / Plus Query: 56 ccgtcccacccgcacatcgagtaccagcccgcgcccgccatgctggactcggaggagccg 115 ||||| ||||||||| ||||||||||||| |||||||||||||||| | | ||| |||| Sbjct: 711 ccgtcgcacccgcacgtcgagtaccagccggcgcccgccatgctggcccccgagccgccg 770 Query: 116 caggccctcaccgccaagccggaagcgccacccacggctgtggacatcttcaagctgtgc 175 ||||| || ||||||||||||| |||| ||||| || ||||||||||||||||||| | Sbjct: 771 caggcgctgaccgccaagccggcgccgccgcccaccgccgtggacatcttcaagctgtcc 830 Query: 176 cgcgccgacctcggccgcctccgcgcccagctccccacgggcgagggcgcgccgcggttc 235 ||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||| | Sbjct: 831 cgctccgacctcggccgcctccggtcccagctgccccgcggcgagggcgcgccgcggtac 890 Query: 236 agcacctacgcggtgctcggggcgcacgtgtggcggtgcgcgtccctggcccgtggcctg 295 ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || || || Sbjct: 891 agcacgtacgcggtgctcgcggcgcacgtgtggcggtgcgcgtcgctggcgcgggggctc 950 Query: 296 tccccagagcagcccaccaagctatactgcgccacggacgggcggcagcggctgcagccc 355 || | ||||||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 951 cccgcggagcagcccaccaagctgtactgcgccacggacggacgccagcggctgcagccg 1010 Query: 356 gcgctcccggagggctacttcggcaacgtcatcttcaccgccacgccgctcgcggtggcg 415 |||| || || ||||||||||||||||| |||||||| || ||||||||||| | ||| Sbjct: 1011 tcgctgcccgacggctacttcggcaacgtgatcttcacggcgacgccgctcgccgaggcc 1070 Query: 416 ggcagggtgactggctcgctggcggacggcgcg 448 || |||||||| || |||||||||||||||||| Sbjct: 1071 gggagggtgaccgggtcgctggcggacggcgcg 1103
>dbj|AK060705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G09, full insert sequence Length = 1714 Score = 367 bits (185), Expect = 2e-98 Identities = 341/393 (86%) Strand = Plus / Plus Query: 56 ccgtcccacccgcacatcgagtaccagcccgcgcccgccatgctggactcggaggagccg 115 ||||| ||||||||| ||||||||||||| |||||||||||||||| | | ||| |||| Sbjct: 709 ccgtcgcacccgcacgtcgagtaccagccggcgcccgccatgctggcccccgagccgccg 768 Query: 116 caggccctcaccgccaagccggaagcgccacccacggctgtggacatcttcaagctgtgc 175 ||||| || ||||||||||||| |||| ||||| || ||||||||||||||||||| | Sbjct: 769 caggcgctgaccgccaagccggcgccgccgcccaccgccgtggacatcttcaagctgtcc 828 Query: 176 cgcgccgacctcggccgcctccgcgcccagctccccacgggcgagggcgcgccgcggttc 235 ||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||| | Sbjct: 829 cgctccgacctcggccgcctccggtcccagctgccccgcggcgagggcgcgccgcggtac 888 Query: 236 agcacctacgcggtgctcggggcgcacgtgtggcggtgcgcgtccctggcccgtggcctg 295 ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || || || Sbjct: 889 agcacgtacgcggtgctcgcggcgcacgtgtggcggtgcgcgtcgctggcgcgggggctc 948 Query: 296 tccccagagcagcccaccaagctatactgcgccacggacgggcggcagcggctgcagccc 355 || | ||||||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 949 cccgcggagcagcccaccaagctgtactgcgccacggacggacgccagcggctgcagccg 1008 Query: 356 gcgctcccggagggctacttcggcaacgtcatcttcaccgccacgccgctcgcggtggcg 415 |||| || || ||||||||||||||||| |||||||| || ||||||||||| | ||| Sbjct: 1009 tcgctgcccgacggctacttcggcaacgtgatcttcacggcgacgccgctcgccgaggcc 1068 Query: 416 ggcagggtgactggctcgctggcggacggcgcg 448 || |||||||| || |||||||||||||||||| Sbjct: 1069 gggagggtgaccgggtcgctggcggacggcgcg 1101
>gb|AY109546.1| Zea mays CL531_1 mRNA sequence Length = 1701 Score = 145 bits (73), Expect = 1e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 305 cagcccaccaagctatactgcgccacggacgggcggcagcggctgcagcccgcgctcccg 364 |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 1000 cagcccaccaagctgtactgcgccacggacgggcggcagcggctgcagccgccgcttccg 1059 Query: 365 gagggctacttcggcaacgtcatcttcaccgccacgccgct 405 |||||||||||||||||||| |||||||| || |||||||| Sbjct: 1060 gagggctacttcggcaacgtgatcttcacggcgacgccgct 1100 Score = 79.8 bits (40), Expect = 7e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 48 cgccgaccccgtcccacccgcacatcgagtaccagcccgcgcccgccatgct 99 ||||||||||| || |||||||||||||||||||||| |||||||||||||| Sbjct: 743 cgccgaccccggcctacccgcacatcgagtaccagccggcgcccgccatgct 794 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 161 atcttcaagctgtgccgcgccgacctcggccgcctccg 198 ||||||||||| | ||||||||| |||| ||||||||| Sbjct: 856 atcttcaagctctcccgcgccgagctcgtccgcctccg 893 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 235 cagcacctacgcggtgctcggggcgcacgtgtggcgg 271 |||||| ||||| ||||| | |||||||||||||||| Sbjct: 930 cagcacgtacgctgtgctggcggcgcacgtgtggcgg 966
>dbj|AB076983.1| Avena sativa AsHHT4 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 4, partial cds Length = 1100 Score = 129 bits (65), Expect = 8e-27 Identities = 201/245 (82%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 152 gctgtggacatcttcaagctgtgccgcgccgacctcggccgcctccgcgcccagctcccc 211 |||||||||||||||||||| |||| | || || |||||||| ||||| ||||||||| Sbjct: 284 gctgtggacatcttcaagctcacccgctcggagcttggccgcctgcgcgcgcagctcccc 343 Query: 212 acgggcgagggcgcgccgcggttcagcacctacgcggtgctcggggcgcacgtgtggcgg 271 ||||| || || || ||||| |||||||| ||||| || || | || || || ||||| Sbjct: 344 acgggtgaaggtgcaccgcgtttcagcacgtacgctgttctagccgcacatgtctggcgc 403 Query: 272 tgcgcgtccctggcccgtggcctgtccccagagcagcccaccaagctatactgcgccacg 331 || | ||||| || ||||||||| | | || |||||||||||||| ||||| ||||| Sbjct: 404 tgtgtctcccttgcgcgtggcctgcctgccgaacagcccaccaagctgtactgtgccacc 463 Query: 332 gacgggcggcagcggctgcagcccgcgctcccggagggctacttcggcaacgtcatcttc 391 |||||||| || |||||||||||| || | |||||||| |||||||| |||||||||||| Sbjct: 464 gacgggcgacatcggctgcagccc-cgttgccggagggttacttcggaaacgtcatcttc 522 Query: 392 accgc 396 ||||| Sbjct: 523 accgc 527
>ref|XM_450042.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1151 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 178 cgccgacctcggccgcctccgcgccc 203 ||||||||||| |||||||||||||| Sbjct: 304 cgccgacctcgcccgcctccgcgccc 329
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 178 cgccgacctcggccgcctccgcgccc 203 ||||||||||| |||||||||||||| Sbjct: 1202885 cgccgacctcgcccgcctccgcgccc 1202910
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 gcgcacgtgtggcggtgcgcgt 278 |||||||||||||||||||||| Sbjct: 4280759 gcgcacgtgtggcggtgcgcgt 4280780
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 gctcgcggtggcgggcagggtg 424 |||||||||||||||||||||| Sbjct: 328195 gctcgcggtggcgggcagggtg 328216 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cggccgcctccgcgcccagc 206 |||||||||||||||||||| Sbjct: 7238934 cggccgcctccgcgcccagc 7238915
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 gcgcacgtgtggcggtgcgcgt 278 |||||||||||||||||||||| Sbjct: 125980 gcgcacgtgtggcggtgcgcgt 126001
>dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0563F09 Length = 174905 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 178 cgccgacctcggccgcctccgcgccc 203 ||||||||||| |||||||||||||| Sbjct: 33759 cgccgacctcgcccgcctccgcgccc 33784
>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1310_F05 Length = 107916 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 178 cgccgacctcggccgcctccgcgccc 203 ||||||||||| |||||||||||||| Sbjct: 91479 cgccgacctcgcccgcctccgcgccc 91504
>dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E02, full insert sequence Length = 1500 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 gcgcacgtgtggcggtgcgcgt 278 |||||||||||||||||||||| Sbjct: 827 gcgcacgtgtggcggtgcgcgt 848
>dbj|AK068597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153N07, full insert sequence Length = 1151 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 178 cgccgacctcggccgcctccgcgccc 203 ||||||||||| |||||||||||||| Sbjct: 304 cgccgacctcgcccgcctccgcgccc 329
>gb|BC079138.1| Rattus norvegicus cDNA clone IMAGE:7127764 Length = 1749 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 gccatgctggactcggaggag 112 ||||||||||||||||||||| Sbjct: 480 gccatgctggactcggaggag 500
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 cgccgacctcggccgcctccgcgcccagc 206 |||||||||||||||||| | |||||||| Sbjct: 2617560 cgccgacctcggccgcctgctcgcccagc 2617588
>emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin gene cluster, strain DSM 40236 Length = 90600 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 gccgctcgcggtggcgggcag 420 ||||||||||||||||||||| Sbjct: 48719 gccgctcgcggtggcgggcag 48699
>gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, complete sequence Length = 207997 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 cgcgcccagctccccacgggc 217 ||||||||||||||||||||| Sbjct: 193023 cgcgcccagctccccacgggc 193003
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ccgcgccgacctcggccgcct 195 ||||||||||||||||||||| Sbjct: 3520189 ccgcgccgacctcggccgcct 3520169
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 cgccgacctcggccgcctccgcgcccagc 206 |||||||||||||||||| | |||||||| Sbjct: 2473311 cgccgacctcggccgcctgctcgcccagc 2473339
>gb|AC138512.4| Homo sapiens chromosome 16 clone RP11-93B18, complete sequence Length = 159064 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 cgcgcccagctccccacgggc 217 ||||||||||||||||||||| Sbjct: 53956 cgcgcccagctccccacgggc 53976
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgccc 203 ||||||||||||||||||||| Sbjct: 5005745 acctcggccgcctccgcgccc 5005725 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 agtaccagcccgcgcccgcca 95 ||||||||||||||||||||| Sbjct: 3243656 agtaccagcccgcgcccgcca 3243676
>gb|AC010442.7| Homo sapiens chromosome 5 clone CTD-2228K2, complete sequence Length = 153197 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 gccgaccccgtcccacccgca 69 ||||||||||||||||||||| Sbjct: 128367 gccgaccccgtcccacccgca 128387
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 184 cctcggccgcctccgcgcccagctc 208 ||||||||||||| ||||||||||| Sbjct: 1083143 cctcggccgcctcggcgcccagctc 1083119
>gb|AC136837.1| Homo sapiens chromosome 16 clone RP11-483N11, complete sequence Length = 65756 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 cgcgcccagctccccacgggc 217 ||||||||||||||||||||| Sbjct: 33756 cgcgcccagctccccacgggc 33736
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 cacgccgctcgcggtggcgg 416 |||||||||||||||||||| Sbjct: 503052 cacgccgctcgcggtggcgg 503071
>ref|NM_018834.4| Homo sapiens matrin 3 (MATR3), transcript variant 2, mRNA Length = 3921 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ggcggcagcggctgcagccc 355 |||||||||||||||||||| Sbjct: 40 ggcggcagcggctgcagccc 21
>ref|XM_463664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 357 cgctcccggagggctacttcggcaacgtcatc 388 ||||||||| ||| ||||||||||||| |||| Sbjct: 929 cgctcccggcggggtacttcggcaacgccatc 960
>ref|NM_189999.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 gccgcgccgacctcggccgcctcc 197 |||||||||| ||||||||||||| Sbjct: 107 gccgcgccgagctcggccgcctcc 130
>ref|XM_514268.1| PREDICTED: Pan troglodytes similar to tetratricopeptide repeat domain 13 (LOC457814), mRNA Length = 1554 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cgggcggcagcggctgcagcccgc 357 |||||||| ||||||||||||||| Sbjct: 251 cgggcggcggcggctgcagcccgc 274
>gb|BT015284.1| Drosophila melanogaster GH24315 full insert cDNA Length = 1430 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 cggacgggcggcagcggctgcagcccgc 357 ||||| |||||||||||||||| ||||| Sbjct: 1210 cggaccggcggcagcggctgcatcccgc 1237
>ref|XM_617648.2| PREDICTED: Bos taurus similar to protein tyrosine phosphatase, receptor type, sigma isoform 2 precursor (LOC537480), mRNA Length = 6460 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gacctcggccgcctccgcgcccag 205 |||||||||||||||| ||||||| Sbjct: 2136 gacctcggccgcctcctcgcccag 2113
>ref|XM_990401.1| PREDICTED: Mus musculus hypothetical protein LOC671993 (LOC671993), mRNA Length = 1755 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gcagcccgcgctcccggagg 368 |||||||||||||||||||| Sbjct: 807 gcagcccgcgctcccggagg 826
>ref|XM_898388.2| PREDICTED: Mus musculus hypothetical LOC624524 (LOC624524), mRNA Length = 3676 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 171 acctcggccgcctccgcgcc 152
>ref|XM_982770.1| PREDICTED: Mus musculus hypothetical LOC624524 (LOC624524), mRNA Length = 3676 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 171 acctcggccgcctccgcgcc 152
>ref|XM_977068.1| PREDICTED: Mus musculus hypothetical protein LOC665457 (LOC665457), mRNA Length = 636 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cagcggctgcagcccgcgctcccg 364 |||||||||| ||||||||||||| Sbjct: 550 cagcggctgcggcccgcgctcccg 573
>ref|XM_988414.1| PREDICTED: Mus musculus hypothetical protein LOC676239 (LOC676239), mRNA Length = 636 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cagcggctgcagcccgcgctcccg 364 |||||||||| ||||||||||||| Sbjct: 550 cagcggctgcggcccgcgctcccg 573
>gb|AC127341.3| Mus musculus BAC clone RP23-189L19 from chromosome 17, complete sequence Length = 213609 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gcagcccgcgctcccggagg 368 |||||||||||||||||||| Sbjct: 132399 gcagcccgcgctcccggagg 132418
>gb|BC042868.2| Mus musculus membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), mRNA (cDNA clone IMAGE:5356309) Length = 1172 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 163 acctcggccgcctccgcgcc 144
>gb|BC026746.1| Mus musculus leucine zipper protein 1, mRNA (cDNA clone IMAGE:4009617), containing frame-shift errors Length = 914 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 cagcggctgcagcccgcgctcccg 364 |||||||||| ||||||||||||| Sbjct: 64 cagcggctgcggcccgcgctcccg 41
>gb|AC122804.4| Mus musculus BAC clone RP23-296J10 from 6, complete sequence Length = 205659 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 acgggcggcagcggctgcag 352 |||||||||||||||||||| Sbjct: 109045 acgggcggcagcggctgcag 109026
>gb|BC046421.1| Mus musculus membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), mRNA (cDNA clone IMAGE:5356540), partial cds Length = 1172 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 163 acctcggccgcctccgcgcc 144
>emb|AL844165.5| Human DNA sequence from clone RP11-541E22 on chromosome 1 Contains the 5' end of the TTC13 gene for tetratricopeptide repeat domain 13, the 5' end of the gene for the likely ortholog of yeast ARV1 (ARV1) and a CpG island, complete sequence Length = 42925 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cgggcggcagcggctgcagcccgc 357 |||||||| ||||||||||||||| Sbjct: 26070 cgggcggcggcggctgcagcccgc 26047
>gb|BC110880.1| Homo sapiens tetratricopeptide repeat domain 13, mRNA (cDNA clone IMAGE:6068886), with apparent retained intron Length = 3026 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cgggcggcagcggctgcagcccgc 357 |||||||| ||||||||||||||| Sbjct: 212 cgggcggcggcggctgcagcccgc 235
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gccgcgccgacctcggccgc 193 |||||||||||||||||||| Sbjct: 510001 gccgcgccgacctcggccgc 510020
>emb|AL121832.56|HSJ908M14 Human DNA sequence from clone RP5-908M14 on chromosome 20 Contains the RPS21 gene for ribosomal protein S21, the C20orf150 gene for a novel protein similar to Mus musculus cables,, the C20orf151 gene for a novel protein weakly similar to retinoblastoma binding protein 8 (RBBP8), a novel gene and four CpG islands, complete sequence Length = 79951 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gccgcgccgacctcggccgc 193 |||||||||||||||||||| Sbjct: 30679 gccgcgccgacctcggccgc 30660
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gctcggggcgcacgtgtggc 269 |||||||||||||||||||| Sbjct: 2973067 gctcggggcgcacgtgtggc 2973086
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 ggcggcagcggctgcagcccgcgc 359 |||||||||||| ||||||||||| Sbjct: 123757 ggcggcagcggccgcagcccgcgc 123780
>gb|BC047662.1| Homo sapiens tetratricopeptide repeat domain 13, mRNA (cDNA clone IMAGE:5263593), containing frame-shift errors Length = 3122 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cgggcggcagcggctgcagcccgc 357 |||||||| ||||||||||||||| Sbjct: 237 cgggcggcggcggctgcagcccgc 260
>emb|CR860911.1| Pongo pygmaeus mRNA; cDNA DKFZp469J2231 (from clone DKFZp469J2231) Length = 1704 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ggcggcagcggctgcagccc 355 |||||||||||||||||||| Sbjct: 35 ggcggcagcggctgcagccc 16
>emb|CR859271.1| Pongo pygmaeus mRNA; cDNA DKFZp468P115 (from clone DKFZp468P115) Length = 3240 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gcagcccaccaagctatact 323 |||||||||||||||||||| Sbjct: 1992 gcagcccaccaagctatact 2011
>gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182960 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 cggacgggcggcagcggctgcagcccgc 357 ||||| |||||||||||||||| ||||| Sbjct: 51814 cggaccggcggcagcggctgcatcccgc 51841
>dbj|AK075561.1| Homo sapiens cDNA PSEC0261 fis, clone NT2RP3004063, weakly similar to MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR Length = 3080 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cgggcggcagcggctgcagcccgc 357 |||||||| ||||||||||||||| Sbjct: 227 cgggcggcggcggctgcagcccgc 250
>dbj|AK075386.1| Homo sapiens cDNA PSEC0076 fis, clone NT2RP2003471, weakly similar to MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR3 Length = 3253 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cgggcggcagcggctgcagcccgc 357 |||||||| ||||||||||||||| Sbjct: 214 cgggcggcggcggctgcagcccgc 237
>gb|L39891.1|HUMPKD1GEN Homo sapiens polycystic kidney disease-associated protein (PKD1) gene, complete cds Length = 53522 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ccagcccgcgcccgccatgc 98 |||||||||||||||||||| Sbjct: 3545 ccagcccgcgcccgccatgc 3564
>ref|NM_168896.1| Drosophila melanogaster CG11309-RB, transcript variant B (CG11309), mRNA Length = 2247 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 cggacgggcggcagcggctgcagcccgc 357 ||||| |||||||||||||||| ||||| Sbjct: 1237 cggaccggcggcagcggctgcatcccgc 1264
>ref|NM_141044.2| Drosophila melanogaster CG11309-RA, transcript variant A (CG11309), mRNA Length = 2233 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 cggacgggcggcagcggctgcagcccgc 357 ||||| |||||||||||||||| ||||| Sbjct: 1223 cggaccggcggcagcggctgcatcccgc 1250
>dbj|AK139583.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020005J03 product:leucine zipper protein 1, full insert sequence Length = 1447 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 cagcggctgcagcccgcgctcccg 364 |||||||||| ||||||||||||| Sbjct: 89 cagcggctgcggcccgcgctcccg 66
>dbj|AK144434.1| Mus musculus 21 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:G630068H18 product:membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), full insert sequence Length = 2223 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 217 acctcggccgcctccgcgcc 198
>gb|AC108080.2| Homo sapiens chromosome 5 clone CTC-315N8, complete sequence Length = 160494 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ggcggcagcggctgcagccc 355 |||||||||||||||||||| Sbjct: 16260 ggcggcagcggctgcagccc 16241
>ref|NM_024525.2| Homo sapiens tetratricopeptide repeat domain 13 (TTC13), mRNA Length = 3253 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cgggcggcagcggctgcagcccgc 357 |||||||| ||||||||||||||| Sbjct: 214 cgggcggcggcggctgcagcccgc 237
>gb|AC099553.1| Drosophila melanogaster 3L BAC RP98-25G5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177608 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 330 cggacgggcggcagcggctgcagcccgc 357 ||||| |||||||||||||||| ||||| Sbjct: 18431 cggaccggcggcagcggctgcatcccgc 18404
>gb|AY069637.1| Drosophila melanogaster LD40450 full length cDNA Length = 1633 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 330 cggacgggcggcagcggctgcagcccgc 357 ||||| |||||||||||||||| ||||| Sbjct: 1223 cggaccggcggcagcggctgcatcccgc 1250
>dbj|AK164390.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130094K04 product:membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), full insert sequence Length = 3525 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 179 acctcggccgcctccgcgcc 160
>gb|AC011404.6| Homo sapiens chromosome 5 clone CTB-43P18, complete sequence Length = 123931 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ggcggcagcggctgcagccc 355 |||||||||||||||||||| Sbjct: 47805 ggcggcagcggctgcagccc 47786
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gccgacctcggccgcctccgcgcc 202 ||||||||| |||||||||||||| Sbjct: 605615 gccgacctcagccgcctccgcgcc 605638
>dbj|AK012514.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700072H04 product:leucine zipper protein 1, full insert sequence Length = 897 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 cagcggctgcagcccgcgctcccg 364 |||||||||| ||||||||||||| Sbjct: 76 cagcggctgcggcccgcgctcccg 53
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 gccgcgccgacctcggccgcctcc 197 |||||||||| ||||||||||||| Sbjct: 40731614 gccgcgccgagctcggccgcctcc 40731637 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 357 cgctcccggagggctacttcggcaacgtcatc 388 ||||||||| ||| ||||||||||||| |||| Sbjct: 40502803 cgctcccggcggggtacttcggcaacgccatc 40502834
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 gccgcgccgacctcggccgcctcc 197 |||||||||| ||||||||||||| Sbjct: 34260 gccgcgccgagctcggccgcctcc 34283
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 357 cgctcccggagggctacttcggcaacgtcatc 388 ||||||||| ||| ||||||||||||| |||| Sbjct: 64427 cgctcccggcggggtacttcggcaacgccatc 64458
>ref|NM_031215.1| Homo sapiens Cdk5 and Abl enzyme substrate 2 (CABLES2), mRNA Length = 3860 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gccgcgccgacctcggccgc 193 |||||||||||||||||||| Sbjct: 68 gccgcgccgacctcggccgc 87
>ref|XM_342682.2| PREDICTED: Rattus norvegicus membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) (predicted) (Mpp6_predicted), mRNA Length = 979 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 27 acctcggccgcctccgcgcc 8
>gb|AC174932.1| Ornithorhynchus anatinus BAC clone OABb-260D21 from chromosome unknown, complete sequence Length = 137944 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ctttaattttaatcatcgcc 51 |||||||||||||||||||| Sbjct: 4312 ctttaattttaatcatcgcc 4293
>gb|AF199010.1|AF199010 Mus musculus PALS2-beta splice variant (Pals2) mRNA, complete cds Length = 1987 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 212 acctcggccgcctccgcgcc 193
>gb|AF199009.1|AF199009 Mus musculus PALS2-alpha splice variant (Pals2) mRNA, complete cds Length = 1945 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 212 acctcggccgcctccgcgcc 193
>gb|BC069908.1| Mus musculus membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), mRNA (cDNA clone IMAGE:4457630), partial cds Length = 1202 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 205 acctcggccgcctccgcgcc 186
>emb|AJ329777.1|HSA329777 Homo sapiens genomic sequence surrounding NotI site, clone NR1-RP9R Length = 719 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gccgcgccgacctcggccgc 193 |||||||||||||||||||| Sbjct: 61 gccgcgccgacctcggccgc 80
>gb|AC153618.4| Mus musculus 6 BAC RP23-5O1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204946 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 91873 acctcggccgcctccgcgcc 91892
>ref|NM_208040.1| Eremothecium gossypii AAR145Wp (AAR145W), mRNA Length = 3264 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gccgacctcggccgcctccgcgcc 202 ||||||||| |||||||||||||| Sbjct: 3030 gccgacctcagccgcctccgcgcc 3053
>dbj|AK068358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146G08, full insert sequence Length = 1690 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 gccgcgccgacctcggccgcctcc 197 |||||||||| ||||||||||||| Sbjct: 140 gccgcgccgagctcggccgcctcc 163
>gb|AF161181.1|AF161181 Mus musculus P55T protein mRNA, complete cds Length = 2061 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 80 acctcggccgcctccgcgcc 61
>gb|AE003594.3| Drosophila melanogaster chromosome 3L, section 75 of 83 of the complete sequence Length = 314904 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 330 cggacgggcggcagcggctgcagcccgc 357 ||||| |||||||||||||||| ||||| Sbjct: 37021 cggaccggcggcagcggctgcatcccgc 36994
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 tcaccgccaagccggaagcg 142 |||||||||||||||||||| Sbjct: 232565 tcaccgccaagccggaagcg 232584
>gb|AF055904.1|AF055904 Myxococcus xanthus acetylornithine deacetylase (argE) gene, complete cds; and unknown gene Length = 2833 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ccgcctccgcgcccagctcc 209 |||||||||||||||||||| Sbjct: 2654 ccgcctccgcgcccagctcc 2635
>ref|NM_019939.1| Mus musculus membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) (Mpp6), mRNA Length = 2061 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 80 acctcggccgcctccgcgcc 61
>gb|BC106140.1| Mus musculus membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), mRNA (cDNA clone IMAGE:3660772), partial cds Length = 1160 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 163 acctcggccgcctccgcgcc 144
>emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chromosome 4, complete sequence Length = 202412 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 cagcggctgcagcccgcgctcccg 364 |||||||||| ||||||||||||| Sbjct: 133009 cagcggctgcggcccgcgctcccg 132986
>gb|AC153819.5| Mus musculus 6 BAC RP23-445H14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 acctcggccgcctccgcgcc 202 |||||||||||||||||||| Sbjct: 179518 acctcggccgcctccgcgcc 179537
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ctccccacgggcgagggcgc 225 |||||||||||||||||||| Sbjct: 18439 ctccccacgggcgagggcgc 18420 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,090,180 Number of Sequences: 3902068 Number of extensions: 3090180 Number of successful extensions: 74325 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72262 Number of HSP's gapped (non-prelim): 2054 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)