ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast71e10 |
|---|---|
| Clone Library Name | barley_pub |
>BCP_PEA (Q41001) Blue copper protein precursor| Length = 189 Score = 81.6 bits (200), Expect = 4e-16 Identities = 35/63 (55%), Positives = 45/63 (71%) Frame = +2 Query: 215 YTVGDTQGWATGVDYSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCSGTNALAN 394 YTVGDT GW G DYS W S K+FAVGD+LVF+Y + HTV EV +S Y SC+ N+++ Sbjct: 27 YTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSIST 86 Query: 395 DDS 403 D + Sbjct: 87 DST 89
>BCB2_ARATH (O80517) Uclacyanin-2 precursor (Uclacyanin-II) (Blue| copper-binding protein II) (BCB II) (Phytocyanin 2) Length = 202 Score = 61.6 bits (148), Expect = 4e-10 Identities = 27/52 (51%), Positives = 34/52 (65%) Frame = +2 Query: 239 WATGVDYSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCSGTNALAN 394 W TGVDYSGW +GK+F VGD L F Y S HTV V ++GY C +++ N Sbjct: 36 WTTGVDYSGWATGKTFRVGDILEFKYGSS-HTVDVVDKAGYDGCDASSSTEN 86
>BABL_LILLO (P60496) Chemocyanin precursor (Basic blue protein) (Plantacyanin)| Length = 126 Score = 60.1 bits (144), Expect = 1e-09 Identities = 28/55 (50%), Positives = 32/55 (58%) Frame = +2 Query: 215 YTVGDTQGWATGVDYSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCSGT 379 YTVGD GW G SGW +GK+F GD LVF Y VH V V GY SC+ + Sbjct: 33 YTVGDGGGWTFGT--SGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTAS 85
>STEL_RHUVE (P00302) Stellacyanin| Length = 107 Score = 59.3 bits (142), Expect = 2e-09 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 5/65 (7%) Frame = +2 Query: 215 YTVGDTQGWAT----GVDYSG-WTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCSGT 379 YTVGD+ GW VDY W S K+F +GD LVF Y + H V +V+Q Y SC+ T Sbjct: 3 YTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDT 62 Query: 380 NALAN 394 +A+ Sbjct: 63 TPIAS 67
>MAVI_CUCPE (P80728) Mavicyanin| Length = 108 Score = 57.4 bits (137), Expect = 8e-09 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%) Frame = +2 Query: 215 YTVGDTQGWATGV--DYSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCSGTNAL 388 + VGD+ GW T V DY+ W S F VGD+L+F+Y +K H V +V Q + SC+ ++ Sbjct: 4 HKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPA 63 Query: 389 AN 394 A+ Sbjct: 64 AS 65
>BABL_ARATH (Q8LG89) Putative basic blue protein precursor (Plantacyanin)| Length = 129 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/52 (42%), Positives = 28/52 (53%) Frame = +2 Query: 215 YTVGDTQGWATGVDYSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSC 370 YTVGD+ W GW GK F GD LVF+Y ++H V +V Y +C Sbjct: 36 YTVGDSGIWTFNA--VGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNC 85
>BABL_CUCSA (P00303) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP)| Length = 96 Score = 47.8 bits (112), Expect = 6e-06 Identities = 20/53 (37%), Positives = 30/53 (56%) Frame = +2 Query: 215 YTVGDTQGWATGVDYSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCS 373 Y VG + GW + W GK F GD L+F+Y +H V V+Q G+++C+ Sbjct: 3 YVVGGSGGWTFNTE--SWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCN 53
>BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-binding| protein) (AtBCB) (Stellacyanin) (Phytocyanin 1) Length = 196 Score = 47.8 bits (112), Expect = 6e-06 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Frame = +2 Query: 215 YTVGDTQGWATGVD---YSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSC 370 Y VGD W +D Y+ W +GK+F VGD L F +A+ H V VS++ + +C Sbjct: 25 YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENC 79
>CPC_CUCSA (P29602) Cucumber peeling cupredoxin (CPC) (Stellacyanin)| Length = 137 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 4/61 (6%) Frame = +2 Query: 215 YTVGDTQGWATGVD---YSGWTSGKSFAVGDTLVFSYASKVHTVTEV-SQSGYTSCSGTN 382 + VGD GW+ YS W +GK+F VGD+L F++ + H V E+ ++ + +C+ N Sbjct: 5 HIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVN 64 Query: 383 A 385 + Sbjct: 65 S 65
>ENL1_ARATH (Q9SK27) Early nodulin-like protein 1 precursor (Phytocyanin-like| protein) Length = 176 Score = 45.4 bits (106), Expect = 3e-05 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Frame = +2 Query: 218 TVGDTQG-W----ATGVDYSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCSGTN 382 TVG G W ++ ++ W F VGD +VF Y S +V EV++ Y SC+ TN Sbjct: 26 TVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTN 85 Query: 383 ALAN 394 LAN Sbjct: 86 PLAN 89
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 45.4 bits (106), Expect = 3e-05 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = +2 Query: 215 YTVGDTQGWATGV--DYSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCSGTNAL 388 + VG + W T +Y W+ F V DTL FSYA +V EV+++ Y +C+ N + Sbjct: 31 FNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPI 90 Query: 389 ANDD 400 D Sbjct: 91 KRVD 94
>UMEC_ARMRU (P42849) Umecyanin (UMC)| Length = 115 Score = 44.7 bits (104), Expect = 5e-05 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 215 YTVGDTQGWATGVD---YSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCSGTNA 385 Y VG W D Y W +GK+F VGD L F +A+ +H V V++ + +C N Sbjct: 3 YDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENP 62 Query: 386 LAN 394 +++ Sbjct: 63 ISH 65
>ENL3_ARATH (Q8LC95) Early nodulin-like protein 3 precursor (Phytocyanin-like| protein) Length = 186 Score = 40.8 bits (94), Expect = 8e-04 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Frame = +2 Query: 224 GDTQGW----ATGVDYSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCSGTNALA 391 G T W + + W F VGDTLV+ Y + +V +V++ Y +C+ TN A Sbjct: 30 GKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAA 89 Query: 392 N 394 N Sbjct: 90 N 90
>NO16_MEDTR (P93328) Early nodulin 16 precursor (N-16)| Length = 180 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = +2 Query: 215 YTVGDTQG-WATGVD----YSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSC 370 Y +GD+ W + ++ W S F VGDT++F Y ++ +V EV++ Y C Sbjct: 27 YLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDTILFEYDNETESVHEVNEHDYIMC 83
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 38.9 bits (89), Expect = 0.003 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Frame = +2 Query: 215 YTVGDTQG-WA----TGVDYSGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSC 370 Y VGD++ W T + W S F VGDT+ F Y +K +V EV + Y C Sbjct: 27 YLVGDSENSWKFPLPTRHALTRWASNYQFIVGDTITFQYNNKTESVHEVEEEDYDRC 83
>NO552_SOYBN (Q02917) Early nodulin 55-2 precursor (N-55-2) (Nodulin-315)| Length = 187 Score = 36.2 bits (82), Expect = 0.019 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +2 Query: 260 SGWTSGKSFAVGDTLVFSYASKVHTVTEVSQSGYTSCS 373 S W + F +GDTL+F Y + +V E +++ Y C+ Sbjct: 49 SHWANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCN 86
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 32.3 bits (72), Expect = 0.28 Identities = 26/77 (33%), Positives = 31/77 (40%) Frame = -3 Query: 379 GPGAGRVAALAHLRHRVHLARVAEH*RVADGERLAAGPAGVVDAGRPALRVADGVRRGRS 200 GPG G A +R A AE A+G A PAG+ GRPA+ G Sbjct: 1467 GPGGGGRAGRGEVRVAAAAAGAAEAAAAAEGALSGAAPAGLSLRGRPAV---PGEAESVL 1523 Query: 199 HPRAARGDEQREESGGG 149 A GD + GGG Sbjct: 1524 VLLGAAGDGLDGDGGGG 1540 Score = 27.7 bits (60), Expect = 6.8 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = -3 Query: 280 LAAGPAGVVDAGRPALRVADGVRRGRSHPRAARGDEQREESGGGGRHMIDDRRSE-SENE 104 L P G DAG +V + RRG ARG QR GG G + R +E ++ Sbjct: 452 LHGAPGGGADAGLEGGKVPEHGRRGARGGDGARGQHQR---GGLGVGLQQRRGAEGAQLG 508 Query: 103 RLALG 89 R ALG Sbjct: 509 RQALG 513
>RECR_CAUCR (Q9ABF8) Recombination protein recR| Length = 200 Score = 32.3 bits (72), Expect = 0.28 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = -3 Query: 382 VGPGAGRVAALAHLRHR-VHLARVAEH*RVADGERLAAGPAGVVDAGRPALRVADGVRRG 206 +GP +GR AALA L+ R LA +A A + G G +D P ADG R G Sbjct: 22 LGPRSGRRAALALLKKRDTLLAPLATAMAEAQAKVRTCGTCGSLDVTDPCAVCADGSRDG 81 Query: 205 R 203 R Sbjct: 82 R 82
>GSCR2_CAEEL (Q9NEU5) Hypothetical protein Y39B6A.33 in chromosome V| Length = 438 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = -3 Query: 235 LRVADGVRRGRSHPRAARGDEQREESGGGGRHMIDDRRSESENERLALGR 86 L +A+G+R HP+ + DE+ EE+G + M +E +++R+ R Sbjct: 238 LEMAEGLR---IHPKYGKDDEEEEEAGNSEKSMKTGGEAEPKSQRVECDR 284
>ATG13_EMENI (Q5BBK4) Autophagy-related protein 13| Length = 974 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 8/96 (8%) Frame = -3 Query: 385 RVGPGAGRVAALA--------HLRHRVHLARVAEH*RVADGERLAAGPAGVVDAGRPALR 230 R GPGA R A+L+ + H +H R++ + G + GP + +G ++ Sbjct: 814 RRGPGAHRDASLSGPTVATSPYSHHPLHQRRISH----SRGRGFSGGPHSL-SSGSSSI- 867 Query: 229 VADGVRRGRSHPRAARGDEQREESGGGGRHMIDDRR 122 R G HP A + +R+ + G +DRR Sbjct: 868 ----ARGGLIHPYPAEREAERDANAGASHSGTEDRR 899
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -3 Query: 274 AGPAGVVDAGRPALRVADGVRRGRSHPRAARGDEQREESGGGGRHMIDDRR 122 +GP G P+ +++ G R S PR AR S GRH D +R Sbjct: 466 SGPQGQSQPSAPSTKLSSGTLRSASSPRGARA-----RSPSRGRHPEDAKR 511
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 2/68 (2%) Frame = -3 Query: 301 RVADGERLAAGPAGVV--DAGRPALRVADGVRRGRSHPRAARGDEQREESGGGGRHMIDD 128 R + GE L GP G+ DA V PR +QR G G ++ D Sbjct: 45 RGSSGEDLLFGPGGLFSDDAAEAEAAVLAAAAGATRPPRPPSAQQQRHARRGSGEIVVLD 104 Query: 127 RRSESENE 104 E E+E Sbjct: 105 DEDEEEDE 112
>BDF1_YEAST (P35817) Protein BDF1| Length = 686 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = -3 Query: 292 DGERLAAGPAGVVDAGRPALRVADGVRRGRSHPRAARGDEQ---REESGGGGRHMID-DR 125 DG+ L + PAG+ + G +A G + + DEQ ++E GG G D D Sbjct: 58 DGDALTSSPAGLAENGIEGATLAANGENGYNATGSGAEDEQQGLKKEEGGQGTKQEDLDE 117 Query: 124 RSESE 110 S+ E Sbjct: 118 NSKQE 122
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 29.3 bits (64), Expect = 2.3 Identities = 33/97 (34%), Positives = 41/97 (42%), Gaps = 2/97 (2%) Frame = -3 Query: 379 GPGAGRVAALAHLRHRVHLARV--AEH*RVADGERLAAGPAGVVDAGRPALRVADGVRRG 206 GPG A R R +ARV A +A A PA ++ P LR+ RR Sbjct: 2231 GPGRVSPGVSARRRRRGPVARVRPARAPALAHARARARAPARLL----PELRL----RRA 2282 Query: 205 RSHPRAARGDEQREESGGGGRHMIDDRRSESENERLA 95 R PR + R GGGGR + RR+ E LA Sbjct: 2283 R-RPRPRQRRRPRRRRGGGGRAL---RRAPGPREPLA 2315
>SWR1_ASHGO (Q759G7) Helicase SWR1 (EC 3.6.1.-)| Length = 1486 Score = 29.3 bits (64), Expect = 2.3 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Frame = -3 Query: 253 DAGRPALRVADGVRRGRSHPRAARGDEQREESGGGGRHMID----DRRSESENERLALGR 86 DAG P L + +RR R + RG+E+ G +++ D R+ + L G Sbjct: 63 DAGAPGLEESSAMRRIRRRQKRGRGEEEGNALLKGVEELVEQKYADLRARLDRPMLKQGP 122 Query: 85 RQR 77 R+R Sbjct: 123 RKR 125
>BHLH8_MOUSE (Q9QYC3) Class B basic helix-loop-helix protein 8 (bHLHB8) (Muscle,| intestine and stomach expression 1) (MIST-1) Length = 197 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Frame = -3 Query: 250 AGRPALRVADGVRRGRSHPRAARGDEQREESGGGGR--HMIDDRRSESENERLALGRRQR 77 +G + G+R + RG+ R G GGR + + R +E ER + + Sbjct: 31 SGSGGSELTKGLRSRTARASGGRGEVSRRRQGSGGRRENSVQRRLESNERERQRMHKLNN 90 Query: 76 IYDMTMDVM*H*RS 35 + +V+ H R+ Sbjct: 91 AFQALREVIPHVRA 104
>RFXAP_HUMAN (O00287) Regulatory factor X-associated protein (RFX DNA-binding| complex 36 kDa subunit) (RFX-associated protein) Length = 272 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Frame = -3 Query: 289 GERLAAGPAGVVDAGRPALRVADGVRRGRSHPRAARGD--EQREESGGG----GRHMIDD 128 G+ AA P G V AG+P + +G G D + + GGG ++D Sbjct: 54 GQDEAAAPGGSVGAGKPVRYLCEGAGDGEEEAGEDEADLLDTSDPPGGGESAASLEDLED 113 Query: 127 RRSESENERLALGRRQR 77 + S E + G R+R Sbjct: 114 EETHSGGEGSSGGARRR 130
>KR1_BHV1S (Q08097) Serine/threonine-protein kinase (EC 2.7.11.1)| Length = 467 Score = 28.9 bits (63), Expect = 3.1 Identities = 29/98 (29%), Positives = 39/98 (39%), Gaps = 1/98 (1%) Frame = -3 Query: 394 VGQRV-GPGAGRVAALAHLRHRVHLARVAEH*RVADGERLAAGPAGVVDAGRPALRVADG 218 +GQ V G A A ++LA E VA R A ++ G G Sbjct: 34 LGQSVRGAAAAPARCAAEGSADLYLAVNNEGPEVAPPARTGPPDADGIEGGAAVAGNEQG 93 Query: 217 VRRGRSHPRAARGDEQREESGGGGRHMIDDRRSESENE 104 + RAA GDE +E + GG + SESE+E Sbjct: 94 GVAAGNERRAATGDE-KESASGGENESESESESESESE 130
>YJDP_SHISS (Q3YUQ0) Hypothetical protein yjdP precursor| Length = 109 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 211 RGRSHPRAARGDEQREESGGGGRHMIDDRRSESENERLALGRRQRIYD 68 RGR + +R D + E R DDRR + E+ R L RQR D Sbjct: 44 RGRDY-EDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLD 90
>YJDP_SHIBS (Q31TR2) Hypothetical protein yjdP precursor| Length = 109 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 211 RGRSHPRAARGDEQREESGGGGRHMIDDRRSESENERLALGRRQRIYD 68 RGR + +R D + E R DDRR + E+ R L RQR D Sbjct: 44 RGRDY-EDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLD 90
>YJDP_ECOLI (Q6BEX5) Hypothetical protein yjdP precursor| Length = 109 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 211 RGRSHPRAARGDEQREESGGGGRHMIDDRRSESENERLALGRRQRIYD 68 RGR + +R D + E R DDRR + E+ R L RQR D Sbjct: 44 RGRDY-EDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLD 90
>YJDP_ECOL6 (Q8FAW3) Hypothetical protein yjdP precursor| Length = 109 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 211 RGRSHPRAARGDEQREESGGGGRHMIDDRRSESENERLALGRRQRIYD 68 RGR + +R D + E R DDRR + E+ R L RQR D Sbjct: 44 RGRDY-EDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLD 90
>MUSC_HUMAN (O60682) Musculin (Activated B-cell factor 1) (ABF-1)| Length = 206 Score = 28.1 bits (61), Expect = 5.2 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Frame = -3 Query: 286 ERLAAGPAGVVDAGRPALRVADGVRRGRSHPRAARGDEQREESGGGGRHMIDDRRSESE- 110 ER A G AG A+G +R R PR A G +GGGG+ + + S +E Sbjct: 57 ERCALGTAGS----------AEGCKRKR--PRVAGGGGAGGSAGGGGKKPLPAKGSAAEC 104 Query: 109 --NERLALGRRQR 77 ++R A R+R Sbjct: 105 KQSQRNAANARER 117
>VG18_BPT4 (P13332) Tail sheath protein Gp18| Length = 658 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +2 Query: 242 ATGVDYSGWTSGKSFAVGDTLVFSYAS-KVHT---VTEVSQSG 358 A +DY+ T G ++AVGD + Y S + T +TEV G Sbjct: 95 AGNIDYTISTPGSNYAVGDKITVKYVSDDIETEGKITEVDADG 137
>CSP_PLASI (Q03110) Circumsporozoite protein precursor (CS)| Length = 386 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Frame = -3 Query: 289 GERLAAGPAGVVDAGRPALRVADGV---RRGRSHPRAARGDEQREESGGGGRHMIDDRRS 119 G+R A PAG AG+PA ADG R P R D Q G+ D Sbjct: 168 GDRAAGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDRAAG 227 Query: 118 ESENERLA 95 + +R A Sbjct: 228 QPAGDRAA 235
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/64 (29%), Positives = 26/64 (40%) Frame = -3 Query: 346 HLRHRVHLARVAEH*RVADGERLAAGPAGVVDAGRPALRVADGVRRGRSHPRAARGDEQR 167 H HR H R + + G L+A G D+ V G+ G P R E+R Sbjct: 2052 HHHHRCHRRRDRKQRSLEKGPSLSADTDGAPDS-----TVGPGLPTGEGPPGCRRERERR 2106 Query: 166 EESG 155 +E G Sbjct: 2107 QERG 2110
>CSP_PLAVS (P13826) Circumsporozoite protein (CS) (Fragment)| Length = 343 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Frame = -3 Query: 289 GERLAAGPAGVVDAGRPALRVADGV---RRGRSHPRAARGDEQREESGGGGRHMIDDRRS 119 G+R A PAG AG+PA ADG R P R D Q G+ D Sbjct: 143 GDRAAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADG 202 Query: 118 ESENERLA 95 + +R A Sbjct: 203 QPAGDRAA 210
>MPP8_HUMAN (Q99549) M-phase phosphoprotein 8| Length = 860 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -3 Query: 301 RVADGERLAAGPAGVVDAGRPALRVADGVR-RGRSHPRAARGDEQREESGGGGRHMID 131 +VA+G R+ A P D+ V +GV G + AARG E +S G + + Sbjct: 3 QVAEGARVTAVPVSAADSTEELAEVEEGVGVVGEDNDAAARGAEAFGDSEEDGEDVFE 60
>CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS)| Length = 378 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Frame = -3 Query: 289 GERLAAGPAGVVDAGRPALRVADGV---RRGRSHPRAARGDEQREESGGGGRHMIDDRRS 119 G+R A PAG AG+PA ADG R P R D Q G+ D Sbjct: 168 GDRAAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADG 227 Query: 118 ESENERLA 95 + +R A Sbjct: 228 QPAGDRAA 235
>EWS_MOUSE (Q61545) RNA-binding protein EWS| Length = 655 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%) Frame = -3 Query: 280 LAAGPAGVVDAGRPALRVAD-GVRRGRSHPRAARGDEQREESGGGGRHMIDD 128 L GP G G P R+ G RG PR RG GG +H D Sbjct: 469 LRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGD 520
>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma| breakpoint region 1 protein) Length = 656 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%) Frame = -3 Query: 280 LAAGPAGVVDAGRPALRVAD-GVRRGRSHPRAARGDEQREESGGGGRHMIDD 128 L GP G G P R+ G RG PR RG GG +H D Sbjct: 470 LRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGD 521
>IF2_NITWN (Q3SWP9) Translation initiation factor IF-2| Length = 871 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -3 Query: 283 RLAAGPAGVVDAGRPALRVADGVRRGR-SHPRAARGDEQREESGGGGRHMIDDRRSESEN 107 R GPA V A +PA + A +RGR + A D+ RE S R + + N Sbjct: 219 RRPGGPARPVIAPKPAAKPAPAKQRGRLTLVTALSADDVRERSIASFRRRTQRLKGHASN 278 Query: 106 E 104 E Sbjct: 279 E 279
>TILS_RHIME (Q92JY3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 453 Score = 27.3 bits (59), Expect = 8.9 Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 9/100 (9%) Frame = -3 Query: 391 GQRVGPGAGRVAALAHLRHRVHLARVAEH*RVADGERLAAGPAGVVD--AGRPALRVADG 218 G++ + R AAL R RVH A VAE ++A AG +D R AL Sbjct: 228 GRQRAASSARAAALIEKRIRVHEALVAE---------VSARHAGEIDDPDWRRALLTVAS 278 Query: 217 VRRGRSHPRAARGDEQREE---SGGGGR----HMIDDRRS 119 V GR H A ++ + SG GR ++ DRR+ Sbjct: 279 VLGGREHMPAFATVQRLSQFLRSGEPGRMTAGRVVFDRRA 318
>U3IP2_HUMAN (O43818) U3 small nucleolar RNA-interacting protein 2 (U3 small| nucleolar ribonucleoproptein-associated 55-kDa protein) (U3 snoRNP-associated 55-kDa protein) (U3-55K) Length = 475 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -3 Query: 247 GRPALRVADGVRRGRSHPRAARGDEQREESGGGGRHMIDDRRSESENERLA 95 G+PA G G+ +A ++ + GGG M ++ S+SE+E LA Sbjct: 11 GKPASGAGAGAGAGKRRRKADSAGDRGKSKGGG--KMNEEISSDSESESLA 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,146,691 Number of Sequences: 219361 Number of extensions: 693538 Number of successful extensions: 2670 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 2547 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2651 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
