Clone Information

BLAST Search Result

Clone Name	bast71e05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UBE4B_HUMAN (O95155) Ubiquitin conjugation factor E4 B (Ubiquiti...	36	0.049
2	SAM68_RAT (Q91V33) KH domain-containing, RNA-binding, signal tra...	33	0.31
3	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	32	0.54
4	YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I	32	0.70
5	TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein	27	0.94
6	Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 in...	31	1.2
7	BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain ...	31	1.6
8	IF2_XANCP (Q8P7U7) Translation initiation factor IF-2	30	2.0
9	IF2_XANC8 (Q4UWA2) Translation initiation factor IF-2	30	2.0
10	TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein ...	30	2.7
11	SAM68_HUMAN (Q07666) KH domain-containing, RNA-binding, signal t...	30	2.7
12	MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated prote...	30	2.7
13	YCX1_CHLRE (P05723) Hypothetical 12.2 kDa protein in 16S rRNA re...	30	3.5
14	EFS_HUMAN (O43281) Embryonal Fyn-associated substrate (HEFS)	30	3.5
15	SWC4_NEUCR (Q870Q1) SWR1-complex protein 4	30	3.5
16	PHOSP_PI3B (P06163) Phosphoprotein (Protein P)	30	3.5
17	NEDD4_DROME (Q9VVI3) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3....	30	3.5
18	IF2_THEFY (Q47RV1) Translation initiation factor IF-2	29	4.5
19	VGLC_VZVS (P10241) Glycoprotein GPV	29	4.5
20	NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytopl...	29	4.5
21	IMPX_YEAST (P32351) Sugar utilization regulatory protein IMP2	29	4.5
22	BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTP...	29	4.5
23	DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing pr...	29	4.5
24	SAM68_MOUSE (Q60749) KH domain-containing, RNA-binding, signal t...	29	4.5
25	S12A2_SQUAC (P55013) Solute carrier family 12 member 2 (Bumetani...	29	4.5
26	VGLC_VZVD (P09256) Glycoprotein GPV	29	5.9
27	MUTL_LACPL (Q88UZ8) DNA mismatch repair protein mutL	29	5.9
28	FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)	29	5.9
29	CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog	29	5.9
30	Y2082_MYCTU (Q10690) Hypothetical protein Rv2082	29	5.9
31	SYA_THET8 (P74941) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	28	7.7
32	SYA_THET2 (P61707) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	28	7.7
33	SAP30_HUMAN (O75446) Histone deacetylase complex subunit SAP30 (...	28	7.7
34	PYRE_RHILT (P42719) Orotate phosphoribosyltransferase (EC 2.4.2....	28	7.7
35	NUP53_XENTR (Q66IJ0) Nucleoporin NUP53 (Nuclear pore complex pro...	28	7.7
36	PCOC1_RAT (O08628) Procollagen C-endopeptidase enhancer 1 precur...	28	7.7
37	TONB_VIBCH (O52042) Protein tonB	28	7.7
38	PSAD_HORVU (P36213) Photosystem I reaction center subunit II, ch...	28	7.7
39	POLG_MDMV (P32652) Genome polyprotein [Contains: Nuclear inclusi...	28	7.7
40	VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6...	28	7.7
41	SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysi...	28	7.7
42	BCSB1_ACEXY (P37716) Cyclic di-GMP-binding protein precursor (Ce...	28	7.7
43	Y065_MYCBO (Q7U2X8) UPF0182 protein Mb0065	28	7.7
44	Y064_MYCTU (O53609) UPF0182 protein Rv0064/MT0070	28	7.7
45	VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6...	28	7.7
46	ODP2_RALEU (Q59098) Dihydrolipoyllysine-residue acetyltransferas...	28	7.7
47	RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C...	28	7.7
48	PPSA_AERPE (Q9YEC5) Phosphoenolpyruvate synthase (EC 2.7.9.2) (P...	28	7.7
49	IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 ...	28	7.7

>UBE4B_HUMAN (O95155) Ubiquitin conjugation factor E4 B (Ubiquitin-fusion|
           degradation protein 2) (Homozygously deleted in
           neuroblastoma 1)
          Length = 1302

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
 Frame = +2

Query: 38  ESAQKP*PA--AQLPMAANSNPSPSAGGD---VPTPALPPVRLAAGQAATIQPSSPRY 196
           ES+  P P+  + +P+   S  SPS       VP+  L P   A+G AA  QPSSPRY
Sbjct: 273 ESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRY 330

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>SAM68_RAT (Q91V33) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +2

Query: 59  PAAQLP-MAANSNPSPSAG--GDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDA 226
           PA Q P +   SNP P A   G  PTP LPP   +A  AA ++P + +Y    +A KD+
Sbjct: 59  PATQPPPLLPPSNPGPDATVVGSAPTPLLPP---SATAAAKMEPEN-KYLPELMAEKDS 113

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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +2

Query: 32  REESAQKP*PAAQLPMAANSNPSPSAGGDVPTP-ALPPVRLAAGQAATIQPSSPR 193
           RE  A +P P    P  A   P P  G   P P A P  R AA Q    +P  PR
Sbjct: 191 RERPAARPGPGGPRPGPAQGGPRPGPGQGAPRPGATPGPRPAAAQGGP-RPGGPR 244

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>YFK5_SCHPO (P87132) Hypothetical protein C167.05 in chromosome I|
          Length = 601

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 224 ASSHHRRIA--IAVDLSDESAFAVRWAVQNYLRPGDAVVLLHV 346
           ASS  R     + +DLS ES  A  WAV   LR GD ++++ V
Sbjct: 424 ASSSKRNCTYFLTLDLSSESLHAAEWAVGILLRNGDTLIIVDV 466

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>TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein|
          Length = 1729

 Score = 26.6 bits (57), Expect(2) = 0.94
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +1

Query: 4   PPRNP--GINSARRVSAKTLASCPAPHGGQLQPLP 102
           PPR P   + SAR+++   + + P P+GG  +PLP
Sbjct: 67  PPRGPLAELPSARKMN---MPAGPQPYGGSKRPLP 98



 Score = 23.5 bits (49), Expect(2) = 0.94
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
 Frame = +2

Query: 80  AANSNPSPSAGGDVPTPALPPVRLAA-----GQAATIQPSSPRY 196
           A        AG + P P  PP R AA        A  +P+S R+
Sbjct: 113 ATQETGKEEAGKEEPPPLTPPARCAAPGGVRKAPAPFRPASERF 156

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>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic|
           region
          Length = 224

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
 Frame = +2

Query: 59  PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPS-----SPRYFFSSLAGKD 223
           P + +P     +P PS     PTP+ PP  +      +  PS      P Y+ S++   +
Sbjct: 94  PPSPIPPTPTPSPPPSPIPPTPTPSPPPSPIPPTPTPSPPPSPSPLGEPMYYPSNIDTNE 153

Query: 224 ASSHHRRIAIAVDLSDESAFAVRW 295
           A  +  R   A D +  + +AV W
Sbjct: 154 ALINFLRPLCATDRT-RATYAVPW 176

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>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5) (hWALp3)
          Length = 1878

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
 Frame = +2

Query: 17   PE*TRREESAQKP*P-------AAQLPMAANSNPSPSAGGDVPTPALPPVRLAA----GQ 163
            PE    +E+   P P       +AQ+P  A   P P+   D PTP+  P +LA+     +
Sbjct: 1278 PEEPEPDEAESSPDPQALWFNISAQMPCNAAPTPPPAVSEDQPTPS--PQQLASSKPMNR 1335

Query: 164  AATIQPSSPRYFFSS-LAG 217
             +   P SP  F S+ LAG
Sbjct: 1336 PSAANPCSPVQFSSTPLAG 1354

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>IF2_XANCP (Q8P7U7) Translation initiation factor IF-2|
          Length = 916

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 32/114 (28%), Positives = 47/114 (41%)
 Frame = +2

Query: 8   REIPE*TRREESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSS 187
           R+  E      SA  P  AA  P +A +  +PS+    P PA P     A + AT  P+ 
Sbjct: 187 RKAAEEAAAAASAPAPVAAAPAPSSAPAARAPSSPSSAPRPARPAGASPASRPAT--PAR 244

Query: 188 PRYFFSSLAGKDASSHHRRIAIAVDLSDESAFAVRWAVQNYLRPGDAVVLLHVR 349
           P    ++   K   SH     +   + D+ A   R+A Q +L   D     +VR
Sbjct: 245 PDDRNNAAKHKTRGSH----VMVAGVEDDDA-TKRFAGQLHLSAADRARRSNVR 293

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>IF2_XANC8 (Q4UWA2) Translation initiation factor IF-2|
          Length = 902

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 32/114 (28%), Positives = 47/114 (41%)
 Frame = +2

Query: 8   REIPE*TRREESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSS 187
           R+  E      SA  P  AA  P +A +  +PS+    P PA P     A + AT  P+ 
Sbjct: 173 RKAAEEAAAAASAPAPVAAAPAPSSAPAARAPSSPSSAPRPARPAGASPASRPAT--PAR 230

Query: 188 PRYFFSSLAGKDASSHHRRIAIAVDLSDESAFAVRWAVQNYLRPGDAVVLLHVR 349
           P    ++   K   SH     +   + D+ A   R+A Q +L   D     +VR
Sbjct: 231 PDDRNNAAKHKTRGSH----VMVAGVEDDDA-TKRFAGQLHLSAADRARRSNVR 279

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>TATB_PSEAE (Q9HUB4) Sec-independent protein translocase protein tatB homolog|
          Length = 141

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +2

Query: 26  TRREESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAA--GQAATIQPSSP 190
           T +    + P PAA+ P  +   P P++     TPA+PP   AA    AA+  PS P
Sbjct: 83  TGQNPPQETPPPAAESPAPSVPTPPPTS-----TPAVPPADAAAPPAVAASTPPSPP 134

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>SAM68_HUMAN (Q07666) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +2

Query: 59  PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDA 226
           P   LP +A + P  + GG  PTP LPP   +A  +  ++P + +Y    +A KD+
Sbjct: 63  PPPLLPPSA-TGPDATVGGPAPTPLLPP---SATASVKMEPEN-KYLPELMAEKDS 113

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>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1|
           (Transducer of regulated cAMP response element-binding
           protein 1) (Transducer of CREB protein 1)
          Length = 634

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 65  AQLPMAANSNPS-PSAGGDVPT-PALPPVRLAAGQAATIQPSSP 190
           + LP +   NP  PS G D+ + PAL   R +AG  A   P+SP
Sbjct: 419 SSLPQSPPENPGQPSMGIDIASAPALQQYRTSAGSPANQSPTSP 462

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>YCX1_CHLRE (P05723) Hypothetical 12.2 kDa protein in 16S rRNA region|
          Length = 111

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +2

Query: 92  NPSPSA--GGDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDASSHHRRIAIAVDL 265
           NP P A   G +P P +PPV        T  PS PR  F+S A K   S  ++      +
Sbjct: 48  NPIPLAVMRGGIPLPGMPPV-------PTATPSLPRSGFTSSAKKIKESRKQKSTALQAV 100

Query: 266 SDE 274
            D+
Sbjct: 101 KDQ 103

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>EFS_HUMAN (O43281) Embryonal Fyn-associated substrate (HEFS)|
          Length = 561

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 1   PPPRNPGINSARRVSAKTLASCPAPHGGQLQPLP 102
           PPP  P + SA  +S + L + P P      P+P
Sbjct: 289 PPPHRPRLPSAESLSRRPLPALPVPEAPSPSPVP 322

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>SWC4_NEUCR (Q870Q1) SWR1-complex protein 4|
          Length = 771

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = +2

Query: 77  MAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSPR---YFFSSLAGKDASSHH 238
           MA  +   P+A     T ALPP   A   A  + P++ R      SS AG  A+ HH
Sbjct: 336 MAPENGVPPAAAAAAATAALPPAAAAVAAAPEVPPAASRRESLAASSTAG--ANDHH 390

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>PHOSP_PI3B (P06163) Phosphoprotein (Protein P)|
          Length = 596

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 399 TETGMEPQSAP*RTEVGRTWRSTTASPGRR*FCTAQRTAKADSSERSTAMAMRRWWEEA 223
           +E+G   +S    +++  + +S T  PGR    +  +T K D  ER       R+ E A
Sbjct: 300 SESGSRTESTSQNSQIPTSGKSNTVGPGRTTLESRIKTQKTDGKEREDTEESTRFTERA 358

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>NEDD4_DROME (Q9VVI3) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-) (DNedd4)|
          Length = 1007

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
 Frame = +2

Query: 62  AAQLPMAANSNPSPSAGGDVPTPALPPVRLA---AGQAATIQP----SSPRYFFSSLAGK 220
           AA LP+ ++S  S  AGGDVP P  PP R A   AGQ  T Q      +PR   +++   
Sbjct: 11  AAALPVPSSS--SSVAGGDVPRP--PPRRRAASVAGQQQTRQEFGNGYTPRRSLAAVNDS 66

Query: 221 DASSHHRRIAI 253
             S H R + +
Sbjct: 67  GDSCHLRIVVL 77

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>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +2

Query: 32  REESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALP 139
           +++ + KP P+ Q    A++   PSAGG+ P PA+P
Sbjct: 66  KKKPSPKPQPSPQQQTKASA---PSAGGETPRPAVP 98

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>VGLC_VZVS (P10241) Glycoprotein GPV|
          Length = 591

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
 Frame = +2

Query: 41  SAQKP*PAAQLPMAANSNPSP-----SAGGDVPTPALPPVRLAAGQ---AATIQPSSPRY 196
           +++KP PA     AA   P P     SA    P PA+ P   A  +   AA  Q S P +
Sbjct: 123 ASRKPDPAVAPTSAATRKPDPAVAPTSAATRNPDPAVAPTSAATRKPDPAANAQHSQPPF 182

Query: 197 FFSSL 211
            F ++
Sbjct: 183 LFENI 187

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>NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT|
           transcription complex cytosolic component) (NF-ATc1)
           (NF-ATc)
          Length = 943

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 59  PAAQLPMAANSNPSPSAGGDVPTPA-LPPVRLAAGQAATIQPSSPRYFFSS 208
           PA  LP A ++ P+P       TP  +PP    +G  A +      YF SS
Sbjct: 54  PALPLPTAHSTLPAPCHNLQTSTPGIIPPADHPSGYGAALDGGPAGYFLSS 104

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>IMPX_YEAST (P32351) Sugar utilization regulatory protein IMP2|
          Length = 346

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 212 AGKDASSHHRRIAIAVDLSDESAFAVRWAVQNYLRPGDAVVLLHVRPT 355
           AG +A +  R   +  DLS ES +A+ + +   +  GD V ++H  P+
Sbjct: 202 AGAEAGNQ-RSFILYTDLSSESTYALTYLMGAAVNQGDTVYIVHWEPS 248

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>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum|
           protein MSE55)
          Length = 391

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +2

Query: 41  SAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 190
           +A+ P PAA  P A  +NP+  A     T A PP   A   A    P+ P
Sbjct: 221 AAETPAPAAN-PPAPTANPTGPAANPPATTANPPAPAANPSAPAATPTGP 269



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 59  PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 190
           PAA+ P  A + P+P+A    P  A PP   A   A    PS+P
Sbjct: 220 PAAETPAPAANPPAPTANPTGPA-ANPPATTANPPAPAANPSAP 262

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>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein|
           (Dystrophia myotonica-containing WD repeat motif
           protein) (DMR-N9 protein)
          Length = 650

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 24/56 (42%), Positives = 25/56 (44%), Gaps = 13/56 (23%)
 Frame = +2

Query: 26  TRRE--ESAQKP*P-----------AAQLPMAANSNPSPSAGGDVPTPALPPVRLA 154
           TRR    SAQ P P           AA  P AA    SP   G  P PALP VRL+
Sbjct: 26  TRRSGPTSAQTPAPPQPTQPPPGPAAASGPGAAGPASSPPPAGPGPGPALPAVRLS 81

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>SAM68_MOUSE (Q60749) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +2

Query: 59  PAAQLP-MAANSNPSPSAG--GDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDA 226
           PA Q P +   S P P A   G  PTP LPP   +A  A  ++P + +Y    +A KD+
Sbjct: 59  PATQPPPLLPPSTPGPDATVVGSAPTPLLPP---SATAAVKMEPEN-KYLPELMAEKDS 113

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>S12A2_SQUAC (P55013) Solute carrier family 12 member 2 (Bumetanide-sensitive|
           sodium-(potassium)-chloride cotransporter 1) (NA-K-CL
           symporter) (NKCC)
          Length = 1191

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 59  PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQA 166
           PA+   + + S P P AG   P P   P+R  A Q+
Sbjct: 6   PASSAGVQSQSGPEPGAGQQEPPPPATPLRPVASQS 41

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>VGLC_VZVD (P09256) Glycoprotein GPV|
          Length = 560

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
 Frame = +2

Query: 41  SAQKP*PAAQLPMAANSNPSP-----SAGGDVPTPALPPVRLAAGQ---AATIQPSSPRY 196
           + +KP PA     AA+  P P     SA    P PA+ P   A+ +   AA  Q S P +
Sbjct: 92  ATRKPDPAVAPTSAASRKPDPAVAPTSAATRKPDPAVAPTSAASRKPDPAANTQHSQPPF 151

Query: 197 FFSSL 211
            + ++
Sbjct: 152 LYENI 156

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>MUTL_LACPL (Q88UZ8) DNA mismatch repair protein mutL|
          Length = 678

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 23/71 (32%), Positives = 35/71 (49%)
 Frame = +2

Query: 68  QLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDASSHHRRI 247
           QL M  N+  S     D  TPA      A+  AAT+QPSS     S+ + + ++ +  R 
Sbjct: 349 QLAMDLNAVSSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVSTTSAQPSAVN--RA 406

Query: 248 AIAVDLSDESA 280
           A++  +  ESA
Sbjct: 407 AVSAVVPSESA 417

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>FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)|
          Length = 1094

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/55 (30%), Positives = 22/55 (40%)
 Frame = +2

Query: 26  TRREESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 190
           +++E     P  A  LP  A   P+P   GD+P P  PP     G      P  P
Sbjct: 553 SQQEAPPSAPPLAPPLPGCAEPPPAPPLPGDLPPPPPPPPLGTDGPVPPPPPPPP 607

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>CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog|
          Length = 240

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +2

Query: 59  PAAQLPMAANSNPSPSAGGDVPT---PALPPVRLAAGQAATIQPSSP 190
           PA    +  ++ PSP   G  PT   P++PP     G  A   PS P
Sbjct: 47  PAVPSGLPPSATPSPVPFGPTPTGMYPSVPPTGPPPGPPAPFPPSGP 93

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>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082|
          Length = 721

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
 Frame = +2

Query: 74  PMAANSNPSPSAGGDV-----PTPALPPVRLAAGQAATIQPSSP 190
           P AA + P P+ G D+       PA PP        A + PSSP
Sbjct: 416 PAAAPAGPLPAYGADLRPPVTTPPATPPTPTGPISGAAVTPSSP 459

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>SYA_THET8 (P74941) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 882

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -3

Query: 234 WEEASLPASEEKK*RGEEGWIVA--ACPAARRTGGSAGVGTSPPADGEGLELAAM 76
           W  A LP  + K  R     +VA  A  A   +GG A +  SP A G GLE  A+
Sbjct: 790 WTVAELPGLDAKALRQAADDLVARGADVALVLSGGQAVLKLSPKAQGMGLEAGAL 844

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>SYA_THET2 (P61707) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 882

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -3

Query: 234 WEEASLPASEEKK*RGEEGWIVA--ACPAARRTGGSAGVGTSPPADGEGLELAAM 76
           W  A LP  + K  R     +VA  A  A   +GG A +  SP A G GLE  A+
Sbjct: 790 WTVAELPGLDAKALRQAADDLVARGADVALVLSGGQAVLKLSPKAQGMGLEAGAL 844

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>SAP30_HUMAN (O75446) Histone deacetylase complex subunit SAP30 (Sin3-associated|
           polypeptide, 30 kDa) (Sin3 corepressor complex subunit
           SAP30)
          Length = 220

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/41 (41%), Positives = 18/41 (43%)
 Frame = -3

Query: 174 IVAACPAARRTGGSAGVGTSPPADGEGLELAAMGSWAAG*G 52
           +VAA  AA   G   G GT     G G   AA    AAG G
Sbjct: 22  VVAAAAAAASAGNGTGAGTGAEVPGAGAVSAAGPPGAAGPG 62

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>PYRE_RHILT (P42719) Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRT)|
           (OPRTase)
          Length = 223

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3

Query: 345 TWRSTTASPGRR*FCTAQRTAKADSSERSTAMAMRRW 235
           TWR+   SPG R   T +R  K+  S      +MRRW
Sbjct: 185 TWRNVLPSPGSRSSSTTRRCRKSSPS------SMRRW 215

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>NUP53_XENTR (Q66IJ0) Nucleoporin NUP53 (Nuclear pore complex protein Nup53)|
           (Nucleoporin Nup35) (35 kDa nucleoporin)
          Length = 330

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 11/45 (24%)
 Frame = +2

Query: 59  PAAQLPMAANS--NPSPSAG---------GDVPTPALPPVRLAAG 160
           P    PMA  S  +P PSAG         GD+PTP  P  R + G
Sbjct: 8   PMGAEPMALGSPTSPKPSAGAQFLPGFLLGDIPTPVTPQQRPSIG 52

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>PCOC1_RAT (O08628) Procollagen C-endopeptidase enhancer 1 precursor|
           (Procollagen COOH-terminal proteinase enhancer 1)
           (Procollagen C-proteinase enhancer 1) (PCPE-1) (Type I
           procollagen COOH-terminal proteinase enhancer) (Type 1
           procollagen C-proteinase e
          Length = 468

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
 Frame = +2

Query: 5   HREIPE*TRREESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVR-------LAAGQ 163
           +R +P     +ESA  P   AQ    + S+P    G  V  P+ P V+         A Q
Sbjct: 269 YRTLPRDAVEKESAPSPGEDAQHGPQSRSDPKTGTGPKVKPPSKPKVQPVEKPEGSPATQ 328

Query: 164 AATIQPSSP 190
           A  + P +P
Sbjct: 329 ATPVAPDAP 337

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>TONB_VIBCH (O52042) Protein tonB|
          Length = 244

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
 Frame = +2

Query: 32  REESAQKP*PAAQLPMAANSNPSP--------SAGGDVPTPALPPVR-LAAGQAATIQP 181
           + ++ +KP PA Q+P  + + P P        +A    PTP   P +  AA Q  T QP
Sbjct: 93  KPQTVKKPVPAEQVPSKSVAKPQPEKVERTAETAQKPAPTPNQQPSQPTAASQGITSQP 151

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>PSAD_HORVU (P36213) Photosystem I reaction center subunit II, chloroplast|
           precursor (Photosystem I 20 kDa subunit) (PSI-D)
          Length = 205

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
 Frame = +2

Query: 50  KP*PAAQLPMAANSNPSP--SAGGDVPTPALPPVRLAAG--QAATIQPSSPRYFFSSLAG 217
           KP PA     ++   P+P  +A  D P PA PP   A        + PS+P   F    G
Sbjct: 24  KPRPATLAMPSSARGPAPLFAAAPDTPAPAAPPAEPAPAGFVPPQLDPSTPSPIFGGSTG 83

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>POLG_MDMV (P32652) Genome polyprotein [Contains: Nuclear inclusion protein B|
           (NI-B) (NIB) (RNA-directed RNA polymerase) (EC
           2.7.7.48); Coat protein (CP)] (Fragment)
          Length = 380

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 141 GGSAGVGTSPPADGEGLELAAMGS 70
           GGS   GT+PPA G G + A  G+
Sbjct: 62  GGSGSQGTTPPATGSGAKPATSGA 85

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>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)|
           (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130)
          Length = 928

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = +2

Query: 98  SPSAGGDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDASSHHR-RIAIAVDLSDE 274
           +P+AG    TP  PP   AA  A    PS P       A  D S+  R  + +A    + 
Sbjct: 63  APAAGRPATTPPAPPPEEAASPAPPASPSPPGPDGDDAASPDNSTDVRAALRLAQAAGEN 122

Query: 275 SAFAV 289
           S F V
Sbjct: 123 SRFFV 127

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>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific|
           SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase
           complex subunit SET1) (SET-domain-containing protein 1A)
          Length = 1707

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +2

Query: 17  PE*TRREESAQKP*PAAQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSP 190
           PE +R  +   +P PA++ P      P    GG  P+P    VR +   A+  +  SP
Sbjct: 415 PEPSRPTDQDYRP-PASEAPPPEPPEPGGGGGGGGPSPEREEVRTSPRPASPARSGSP 471

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>BCSB1_ACEXY (P37716) Cyclic di-GMP-binding protein precursor (Cellulose|
           synthase regulatory subunit) (Cellulose synthase protein
           B) (CDGBP)
          Length = 802

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
 Frame = +2

Query: 65  AQLPMAANSNPSPSAGGDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDASSHHRR 244
           AQ    A+  P+P   G      LPP+  AA QAAT   +S     ++    DA+S    
Sbjct: 16  AQAAPVASKAPAPQPAGS----DLPPLPAAASQAATPAAASADQPATTAPAADAASASAA 71

Query: 245 IAIAVDLSDESAFAVRWAVQNY-LRPGDAVVLLHVRPTSVLYGADWG 382
            A+  +  +  A +    V  Y L+   A   L ++  + L G  +G
Sbjct: 72  DAVVDNAENAIAASDVATVHTYSLKELGAQSALKMQGAATLQGLQFG 118

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>Y065_MYCBO (Q7U2X8) UPF0182 protein Mb0065|
          Length = 979

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 83  ANSNPSPSAGGDVPTPALPPVRLAAGQAA 169
           A S P P AGG  P  A+PP R     AA
Sbjct: 910 AASAPPPGAGGPAPPQAVPPPRTTQPPAA 938

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>Y064_MYCTU (O53609) UPF0182 protein Rv0064/MT0070|
          Length = 979

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 83  ANSNPSPSAGGDVPTPALPPVRLAAGQAA 169
           A S P P AGG  P  A+PP R     AA
Sbjct: 910 AASAPPPGAGGPAPPQAVPPPRTTQPPAA 938

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>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)|
           (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130)
           (Glycoprotein B)
          Length = 932

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = +2

Query: 98  SPSAGGDVPTPALPPVRLAAGQAATIQPSSPRYFFSSLAGKDASSHHR-RIAIAVDLSDE 274
           +P+AG    TP  PP   AA  A    PS P       A  D S+  R  + +A    + 
Sbjct: 63  APAAGRPATTPPAPPPEEAASPAPPASPSPPGPDGDDAASPDNSTDVRAALRLAQAAGEN 122

Query: 275 SAFAV 289
           S F V
Sbjct: 123 SRFFV 127

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>ODP2_RALEU (Q59098) Dihydrolipoyllysine-residue acetyltransferase component of|
           pyruvate dehydrogenase complex (EC 2.3.1.12) (E2)
           (Dihydrolipoamide acetyltransferase component of
           pyruvate dehydrogenase complex)
          Length = 553

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = +2

Query: 38  ESAQKP*PAAQLPMAANSNPSPSAGGDVPTP---ALPPVRLAAGQAATIQPSSP 190
           E+A +P   A  P  A + P+P+A    P P   A P    AAG   TI+   P
Sbjct: 78  EAANEP---AAAPAPAAAAPAPAAAAPAPAPAPAAAPAAAPAAGGGGTIEVKVP 128

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>RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C2PA)|
          Length = 966

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +2

Query: 44  AQKP*PAAQLPMAANSNPS--PSAGGDVPTPA-LPPVRLAAGQAATIQPSSP 190
           ++ P P+ +LP   +  PS  PS   ++P    LPP + ++GQ A   P SP
Sbjct: 461 SKDPSPSQELPAGQDLPPSKDPSPSQELPVGQDLPPRKDSSGQEAAPGPESP 512

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>PPSA_AERPE (Q9YEC5) Phosphoenolpyruvate synthase (EC 2.7.9.2) (Pyruvate, water|
           dikinase) (PEP synthase)
          Length = 845

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 173 IQPSSPRYFFSSLAGKDASSHHRRIAIAVDLSDESAFAVRWAVQNYLRPGDAVVLLHVRP 352
           I+P +P     SL+ K+      R+AI V+        + WA+   L P + ++LL  RP
Sbjct: 320 IRPDAP-----SLSEKEVKEL-ARLAIKVENHFARPMDIEWAIDFELSPPENILLLQARP 373

Query: 353 TSV 361
            +V
Sbjct: 374 ETV 376

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>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1|
           (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220)
          Length = 1600

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
 Frame = +2

Query: 74  PMAANSNPSPSAGGDVPTPALPPVRLAAGQAATI-----------QPSSPRYFFSSLAGK 220
           P +    P+PS G  +P PA PP     GQ A +            PS PR  F     +
Sbjct: 5   PQSTGPPPAPSPG--LPQPAFPP-----GQTAPVVFSTPQATQMNTPSQPRQHFYPSRAQ 57

Query: 221 DASSHHRRIAIAVDLSDESAFAVRWAVQNYLRPGDAVVLLHVRPTSVLYGADWGS 385
             SS   R+        +SA   R     ++ P  + V++   P+ + Y A  G+
Sbjct: 58  PPSSAASRV--------QSAAPARPGPAAHVYPAGSQVMM--IPSQISYPASQGA 102


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.135    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,069,654
Number of Sequences: 219361
Number of extensions: 607681
Number of successful extensions: 3194
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3153
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result