Clone Information

BLAST Search Result

Clone Name	bast71d03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ST14_SOLTU (Q41495) STS14 protein precursor	39	0.005
2	PRMS_MAIZE (Q00008) Pathogenesis-related protein PRMS precursor	35	0.096
3	PR06_LYCES (P04284) Pathogenesis-related leaf protein 6 precurso...	35	0.096
4	PR04_LYCES (Q04108) Pathogenesis-related leaf protein 4 precurso...	35	0.096
5	PR13_HORVU (P35793) Pathogenesis-related protein PRB1-3 precurso...	33	0.21
6	FMN_CHICK (Q05858) Formin (Limb deformity protein)	32	0.48
7	PR1_HORVU (Q05968) Pathogenesis-related protein 1 precursor	32	0.48
8	PR12_HORVU (P35792) Pathogenesis-related protein PRB1-2 precursor	32	0.48
9	PR1_CUCME (P83834) Pathogenesis-related protein (PR-1) (Allergen...	32	0.62
10	FMN2_MOUSE (Q9JL04) Formin-2	32	0.81
11	WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family mem...	31	1.1
12	PR1_ARATH (P33154) Pathogenesis-related protein 1 precursor (PR-1)	31	1.1
13	PR1_MEDTR (Q40374) Pathogenesis-related protein PR-1 precursor	31	1.1
14	ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline...	25	1.1
15	WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family mem...	31	1.4
16	PME17_CHICK (Q98917) Melanocyte protein Pmel 17 precursor (115 k...	31	1.4
17	PHLPP_CAEEL (Q09564) Protein phosphatase PHLPP-like protein (EC ...	31	1.4
18	CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)	31	1.4
19	PRB1_TOBAC (P11670) Basic form of pathogenesis-related protein 1...	30	1.8
20	AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding f...	30	1.8
21	ENA_DROME (Q8T4F7) Protein enabled	30	2.4
22	K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)	30	2.4
23	DIA_DROME (P48608) Protein diaphanous	30	2.4
24	T22D4_MOUSE (Q9EQN3) TSC22 domain family protein 4 (TSC22-relate...	30	3.1
25	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	30	3.1
26	MKL1_HUMAN (Q969V6) MKL/myocardin-like protein 1 (Myocardin-rela...	29	4.0
27	PHX2A_HUMAN (O14813) Paired mesoderm homeobox protein 2A (Paired...	29	4.0
28	PR1C_TOBAC (P09042) Pathogenesis-related protein 1C precursor (P...	29	4.0
29	PR1B_TOBAC (P07053) Pathogenesis-related protein 1B precursor (P...	29	4.0
30	PR1A_TOBAC (P08299) Pathogenesis-related protein 1A precursor (P...	29	4.0
31	SOX10_RAT (O55170) Transcription factor SOX-10	29	4.0
32	SOX10_MOUSE (Q04888) Transcription factor SOX-10 (SOX-21) (Trans...	29	4.0
33	CABL2_MOUSE (Q8K3M5) CDK5 and ABL1 enzyme substrate 2 (Interacto...	29	4.0
34	GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; ...	29	5.3
35	POLG_HCVH (P27958) Genome polyprotein [Contains: Core protein p2...	29	5.3
36	RX_DROME (Q9W2Q1) Retinal homeobox protein Rx (DRx1) (DRx)	29	5.3
37	LAMBV_CHICK (Q01636) Laminin beta-1 chain variant (Laminin beta-...	29	5.3
38	KS6B2_MOUSE (Q9Z1M4) Ribosomal protein S6 kinase beta-2 (EC 2.7....	29	5.3
39	UCP8_SCHPO (O94685) UBA domain-containing protein 8	29	5.3
40	SOX10_HUMAN (P56693) Transcription factor SOX-10	29	5.3
41	PR1A_LYCES (Q08697) Pathogenesis-related protein 1A1 precursor (...	29	5.3
42	FXL19_MOUSE (Q6PB97) F-box/LRR-repeat protein 19 (F-box and leuc...	29	5.3
43	SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Fo...	28	6.9
44	BRO1_EMENI (Q6XPR4) Vacuolar protein-sorting protein bro1 (BRO d...	28	6.9
45	SC14_SCHCO (P35795) Fruiting body protein SC14 precursor	28	6.9
46	IF2_GLOVI (Q7NH85) Translation initiation factor IF-2	28	6.9
47	FHOD1_MOUSE (Q6P9Q4) FH1/FH2 domain-containing protein (Formin h...	28	6.9
48	PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9	28	6.9
49	KS6B2_HUMAN (Q9UBS0) Ribosomal protein S6 kinase beta-2 (EC 2.7....	28	6.9
50	DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-re...	28	9.0
51	CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor	28	9.0

>ST14_SOLTU (Q41495) STS14 protein precursor|
          Length = 214

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRWSADLXXXXXXXXXXXXXXXXCAFADM 412
           EFL  HNKAR+ VGV PL WS  L                C+FA++
Sbjct: 78  EFLDAHNKARSEVGVGPLTWSPMLAKETSLLVRYQRDKQNCSFANL 123

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>PRMS_MAIZE (Q00008) Pathogenesis-related protein PRMS precursor|
          Length = 167

 Score = 34.7 bits (78), Expect = 0.096
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRWSADL 346
           ++L P N ARAAVGV P+ WS  L
Sbjct: 33  DYLTPQNSARAAVGVGPVTWSTKL 56

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>PR06_LYCES (P04284) Pathogenesis-related leaf protein 6 precursor (P6)|
           (Ethylene-induced protein P1) (P14) (P14A) (PR protein)
          Length = 159

 Score = 34.7 bits (78), Expect = 0.096
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRWSADL 346
           ++LA HN ARA VGV P+ W A+L
Sbjct: 30  DYLAVHNDARAQVGVGPMSWDANL 53

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>PR04_LYCES (Q04108) Pathogenesis-related leaf protein 4 precursor (P4)|
          Length = 159

 Score = 34.7 bits (78), Expect = 0.096
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRWSADL 346
           ++LA HN ARA VGV P+ W A+L
Sbjct: 30  DYLAVHNDARAQVGVGPMSWDANL 53

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>PR13_HORVU (P35793) Pathogenesis-related protein PRB1-3 precursor (PR-1B)|
           (HV-8)
          Length = 164

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRWSADL 346
           ++++PHN ARAAVGV  + WS  L
Sbjct: 30  DYVSPHNAARAAVGVGAVSWSTKL 53

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>FMN_CHICK (Q05858) Formin (Limb deformity protein)|
          Length = 1213

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 18/41 (43%), Positives = 19/41 (46%)
 Frame = +1

Query: 43  CSHFTAHRSPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           C  F A   P    P P L  G P PPP  G G+P  PP P
Sbjct: 712 CRDFQAPAPPA-PPPLPGL--GPPVPPPLPGSGLPPPPPPP 749

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>PR1_HORVU (Q05968) Pathogenesis-related protein 1 precursor|
          Length = 164

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRWSADL 346
           ++++PHN AR+AVGV  + WS  L
Sbjct: 30  DYVSPHNAARSAVGVGAVSWSTKL 53

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>PR12_HORVU (P35792) Pathogenesis-related protein PRB1-2 precursor|
          Length = 164

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRWSADL 346
           ++++PHN AR+AVGV  + WS  L
Sbjct: 30  DYVSPHNAARSAVGVGAVSWSTKL 53

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>PR1_CUCME (P83834) Pathogenesis-related protein (PR-1) (Allergen Cuc m 3)|
           (Fragments)
          Length = 41

 Score = 32.0 bits (71), Expect = 0.62
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRWSAD 343
           +F+  HN ARA VGV P+ W+ D
Sbjct: 1   DFVDAHNAARAQVGVGPVHWTVD 23

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>FMN2_MOUSE (Q9JL04) Formin-2|
          Length = 1567

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 11/43 (25%)
 Frame = +1

Query: 70   PLLASPT-----------PDLIHGSPAPPPRGGHGMPSRPPRP 165
            P L SPT           P+++   P PPP  G G+P  PP P
Sbjct: 872  PALPSPTAPALQFSNLQGPEMLPAPPQPPPLPGLGVPPPPPAP 914



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +1

Query: 70  PLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           P  A P P +  G P PPP  G G+P  PP P
Sbjct: 910 PPPAPPLPGM--GIPPPPPLPGMGIPPPPPLP 939



 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 85   PTPDLIHGSPAPPPRGGHGMPSRPPRP 165
            P P +  G P PPP  G G+P  PP P
Sbjct: 926  PLPGM--GIPPPPPLPGMGIPPPPPLP 950



 Score = 28.1 bits (61), Expect = 9.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 106  GSPAPPPRGGHGMPSRPPRP 165
            G P PPP  G G+P  PP P
Sbjct: 1019 GIPPPPPLPGMGIPPPPPLP 1038



 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 85   PTPDLIHGSPAPPPRGGHGMPSRPPRP 165
            P P +  G P PPP  G G+P  PP P
Sbjct: 937  PLPGM--GIPPPPPLPGVGIPPPPPLP 961

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>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
           (Verprolin homology domain-containing protein 2)
          Length = 498

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +1

Query: 70  PLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           P    P P  + G P PPP  G G P  PP P
Sbjct: 319 PPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPP 350

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>PR1_ARATH (P33154) Pathogenesis-related protein 1 precursor (PR-1)|
          Length = 161

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRW 334
           ++L  HN+AR AVGV P++W
Sbjct: 32  DYLRVHNQARGAVGVGPMQW 51

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>PR1_MEDTR (Q40374) Pathogenesis-related protein PR-1 precursor|
          Length = 173

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 272 DEFLAPHNKARAAVGVAPLRWSADL 346
           ++FL P N ARAAVG+ PL W   L
Sbjct: 39  NQFLIPQNIARAAVGLRPLVWDDKL 63

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>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 25.0 bits (53), Expect(2) = 1.1
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 106 GSPAPPPRGGHGMPSRPPRP 165
           G P PPP    G P  PP P
Sbjct: 566 GPPPPPPLPSTGPPPPPPPP 585



 Score = 24.6 bits (52), Expect(2) = 1.1
 Identities = 11/16 (68%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = +1

Query: 82  SPTPD-LIHGSPAPPP 126
           SPTP  L+ G PAPPP
Sbjct: 532 SPTPQGLVLGPPAPPP 547

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>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4|
           (WASP-family protein member 4)
          Length = 625

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +1

Query: 70  PLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           P    P P  + G P PPP  G G P  PP P
Sbjct: 447 PPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPP 478

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>PME17_CHICK (Q98917) Melanocyte protein Pmel 17 precursor (115 kDa melanosomal|
           matrix protein)
          Length = 763

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +3

Query: 60  SPLAITGLTHPRSHPWLPSAATTR 131
           SPL  T  T PR H WLP  AT R
Sbjct: 716 SPLLPTAPTAPRPHSWLPPGATLR 739

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>PHLPP_CAEEL (Q09564) Protein phosphatase PHLPP-like protein (EC 3.1.3.16)|
          Length = 1036

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 61   HRSPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRPV 168
            H SP +  P P + H +P+PPP     +PS  P PV
Sbjct: 942  HPSPPVPPPIPAIRHRTPSPPP---PPLPSSTPPPV 974

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>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 70   PLLASPTPDLIHGSPAPPPRGGHGMPSRPP 159
            P    P  DL H  P PPP G    P++PP
Sbjct: 1196 PPAEPPPTDLAHLPPLPPPEGEARKPAKPP 1225

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>PRB1_TOBAC (P11670) Basic form of pathogenesis-related protein 1 precursor|
           (PRP 1)
          Length = 177

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRW 334
           ++L PHN AR  VGV P+ W
Sbjct: 29  DYLNPHNAARRQVGVGPMTW 48

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>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
          Length = 646

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
 Frame = +1

Query: 52  FTAHRSPLLASPTPDLIHGSPAPPP----RGGHGMPSRPPRP 165
           F +H    L  P PD +   P PPP     GG   P  PP P
Sbjct: 552 FVSHGGESLPPPPPDPVASLPPPPPAFTSAGGAPPPPPPPPP 593

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>ENA_DROME (Q8T4F7) Protein enabled|
          Length = 834

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = +1

Query: 70  PLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           P  A P P  + G P P P GG G P  PP P
Sbjct: 595 PPPAPPAPPAMGGGPPPAP-GGPGAPPPPPPP 625



 Score = 29.3 bits (64), Expect = 4.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 91  PDLIHGSPAPPPRGGHGMPSRPPRP 165
           P + +G+P PP  GG G P  PP P
Sbjct: 579 PQMFNGAPPPPAMGG-GPPPAPPAP 602

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>K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)|
          Length = 1157

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +1

Query: 10  TSLSAPLAHARCSHFTAHRSPLLASPTPDLIHGSPAPPPRGGHGMPSRPP 159
           +S S+P++    S  T H SP   + TP  +   P   P GGH +PS PP
Sbjct: 20  SSESSPVS----SPATNHSSP---ASTPKRVPMGPIIVPPGGHSVPSTPP 62

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>DIA_DROME (P48608) Protein diaphanous|
          Length = 1091

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +1

Query: 85  PTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           P P    G P PPP  G G P  PP P
Sbjct: 546 PMPGRAGGPPPPPPPPGMGGPPPPPMP 572

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>T22D4_MOUSE (Q9EQN3) TSC22 domain family protein 4 (TSC22-related-inducible|
           leucine zipper protein 2)
          Length = 387

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +1

Query: 70  PLLASPTPDLIHGSPAPPPRGGHGMP---SRPP 159
           P LA P P L +G P P P GG G P   S PP
Sbjct: 34  PALAGPPPRLPNGDPNPDP-GGRGTPRNGSPPP 65

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
 Frame = +1

Query: 61  HRSPLLASPTPDLIHGSPA---PPPRGGHGMPSR----PPRPV 168
           H  P  A P P   H  P+   PPP  GH  PSR    PP PV
Sbjct: 70  HAPPRHAYPPPSHGHLPPSVGGPPPHRGHLPPSRGFNPPPSPV 112



 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
 Frame = +1

Query: 70  PLLASPTPDLIHGSPAP-----PPRGGHGMPSRPP 159
           P  ++P P  IH  P P     PP   +G P  PP
Sbjct: 568 PTFSAPPPRQIHSPPPPHRQPRPPTPTYGQPPSPP 602

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>MKL1_HUMAN (Q969V6) MKL/myocardin-like protein 1 (Myocardin-related|
           transcription factor A) (MRTF-A) (Megakaryoblastic
           leukemia 1 protein) (Megacaryocytic acute leukemia
           protein)
          Length = 931

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 67  SPLLASPTPDLIHGSPAPPPRGGHGMPSR 153
           SPL A P+P       APPP G   +P R
Sbjct: 785 SPLAAQPSPSAELPQAAPPPPGSPSLPGR 813

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>PHX2A_HUMAN (O14813) Paired mesoderm homeobox protein 2A (Paired-like homeobox|
           2A) (Aristaless homeobox protein homolog) (ARIX1
           homeodomain protein)
          Length = 284

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 18/49 (36%), Positives = 19/49 (38%)
 Frame = +1

Query: 22  APLAHARCSHFTAHRSPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRPV 168
           A    ARCS           SPTPD     P PPP  G   P   P P+
Sbjct: 163 AKKGEARCSSEDDDSKESTCSPTPDSTASLP-PPPAPGLASPRLSPSPL 210

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>PR1C_TOBAC (P09042) Pathogenesis-related protein 1C precursor (PR-1C)|
          Length = 168

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRW 334
           ++L  HN ARA VGV PL W
Sbjct: 36  DYLDAHNTARADVGVEPLTW 55

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>PR1B_TOBAC (P07053) Pathogenesis-related protein 1B precursor (PR-1B)|
          Length = 168

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRW 334
           ++L  HN ARA VGV PL W
Sbjct: 36  DYLDAHNTARADVGVEPLTW 55

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>PR1A_TOBAC (P08299) Pathogenesis-related protein 1A precursor (PR-1A)|
          Length = 168

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 275 EFLAPHNKARAAVGVAPLRW 334
           ++L  HN ARA VGV PL W
Sbjct: 36  DYLDAHNTARADVGVEPLTW 55

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>SOX10_RAT (O55170) Transcription factor SOX-10|
          Length = 466

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 31  AHARCSHFTAHRSPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           AH + +H   HR P   SP  D   G+P  P    HG P+ P  P
Sbjct: 205 AHYKSAHLD-HRHPEEGSPMSD---GNPEHPSGQSHGPPTPPTTP 245

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>SOX10_MOUSE (Q04888) Transcription factor SOX-10 (SOX-21) (Transcription factor|
           SOX-M)
          Length = 466

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 31  AHARCSHFTAHRSPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           AH + +H   HR P   SP  D   G+P  P    HG P+ P  P
Sbjct: 205 AHYKSAHLD-HRHPEEGSPMSD---GNPEHPSGQSHGPPTPPTTP 245

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>CABL2_MOUSE (Q8K3M5) CDK5 and ABL1 enzyme substrate 2 (Interactor with CDK3 2)|
           (Ik3-2)
          Length = 481

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +1

Query: 70  PLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           P    P P     +PAPPP    G+P  P RP
Sbjct: 70  PAPPPPPPTEAREAPAPPPAPPGGLPGLPARP 101

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>GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30]
          Length = 425

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 15/66 (22%)
 Frame = +1

Query: 10  TSLSAPLAHARCSHFTAHRSPLL---------------ASPTPDLIHGSPAPPPRGGHGM 144
           TSL  PL+    +  T+   P+L               +SP  DL+   P P P GGHG 
Sbjct: 185 TSLPQPLSPQPSAPLTSSLYPVLPKSDPPKPPVLPPDPSSPLIDLLTEEPPPYP-GGHGP 243

Query: 145 PSRPPR 162
           P   PR
Sbjct: 244 PPSGPR 249

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>POLG_HCVH (P27958) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/NT
          Length = 3010

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 91   PDLIHGSPAPPPRGGHGMPSRPPRPV 168
            P ++HG P PPPR     P R  R V
Sbjct: 2307 PPVVHGCPLPPPRSPPVPPPRKKRTV 2332

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>RX_DROME (Q9W2Q1) Retinal homeobox protein Rx (DRx1) (DRx)|
          Length = 873

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
 Frame = +1

Query: 103 HGSPAPPP--RGGHGMPSRPPRP 165
           H  P PP    GGHG P  PP P
Sbjct: 667 HNGPPPPHVGHGGHGQPQPPPPP 689

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>LAMBV_CHICK (Q01636) Laminin beta-1 chain variant (Laminin beta-1-2 chain)|
           (Fragment)
          Length = 198

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 18/55 (32%), Positives = 20/55 (36%)
 Frame = +1

Query: 1   RAHTSLSAPLAHARCSHFTAHRSPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           R  T  + P  HAR      H  P   +P     H  P  PP      P  PPRP
Sbjct: 11  REPTPPATPPTHARPDPTRRHPDPESRAPP----HARPRSPPPPAPSPPPLPPRP 61

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>KS6B2_MOUSE (Q9Z1M4) Ribosomal protein S6 kinase beta-2 (EC 2.7.11.1) (S6K-beta|
           2) (70 kDa ribosomal protein S6 kinase 2) (p70-S6KB)
           (p70 ribosomal S6 kinase beta) (p70 S6Kbeta) (S6K2)
          Length = 485

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = +1

Query: 1   RAHTSLSAPLAHARCSHFTAHR-SPLLASPT----PDLIHGSPAPPPRGGHGMPSRPP 159
           R ++S   P++  + S F   R SP    P     P L+   P+PPP     +P RPP
Sbjct: 413 RLNSSPRTPISPLKFSPFEGFRPSPGPPEPMEPSLPPLLPSPPSPPPTSTAPLPIRPP 470

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>UCP8_SCHPO (O94685) UBA domain-containing protein 8|
          Length = 884

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 67  SPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRPV 168
           +P   +PTP + H  P PP R     PS PP P+
Sbjct: 730 APPTPAPTPAVKHHPPPPPVRSSIS-PSMPPAPL 762

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>SOX10_HUMAN (P56693) Transcription factor SOX-10|
          Length = 466

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 31  AHARCSHFTAHRSPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           AH + +H   HR P   SP  D   G+P  P    HG P+ P  P
Sbjct: 205 AHYKSAHLD-HRHPGEGSPMSD---GNPEHPSGQSHGPPTPPTTP 245

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>PR1A_LYCES (Q08697) Pathogenesis-related protein 1A1 precursor (PR-1A1)|
          Length = 175

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 272 DEFLAPHNKARAAVGVAPLRWSADL 346
           + FL  HN AR  VGV P+ W   L
Sbjct: 26  ENFLNAHNAARRRVGVGPMTWDDGL 50

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>FXL19_MOUSE (Q6PB97) F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat|
           protein 19)
          Length = 674

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 64  RSPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRPV 168
           + PL A PTPD + G P    R G   P  P + V
Sbjct: 176 KGPLPAGPTPDDVPGPPKRKEREGGNEPPTPRKKV 210

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>SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Forced expression|
            inhibition of growth A)
          Length = 1790

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 112  PAPPPRGGHGMPSRPPRP 165
            P PPP GG G P  PP P
Sbjct: 1085 PPPPPPGGFGGPPPPPPP 1102



 Score = 28.5 bits (62), Expect = 6.9
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 112  PAPPPRGGHGMPSRPPRP 165
            P PPP GG G P  PP P
Sbjct: 1072 PPPPPPGGFGGPPPPPPP 1089

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>BRO1_EMENI (Q6XPR4) Vacuolar protein-sorting protein bro1 (BRO domain-containing|
            protein 1)
          Length = 1000

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 6/34 (17%)
 Frame = +1

Query: 82   SPTPDLIHGSPAPPPRGGHGMPS------RPPRP 165
            SPTP   + SP PP   G  MP        PPRP
Sbjct: 907  SPTPTPFYTSPTPPVPSGQYMPQGYVPPPPPPRP 940

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>SC14_SCHCO (P35795) Fruiting body protein SC14 precursor|
          Length = 214

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 272 DEFLAPHNKARAAVGVAPLRWSADL 346
           D++L  HN  RA  G  PL W+ DL
Sbjct: 69  DQWLTAHNDERAQHGPVPLVWNQDL 93

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>IF2_GLOVI (Q7NH85) Translation initiation factor IF-2|
          Length = 925

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 21/52 (40%), Positives = 22/52 (42%)
 Frame = +1

Query: 10  TSLSAPLAHARCSHFTAHRSPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           T L AP A A          P  A PTP     +PAP PR     PS P RP
Sbjct: 205 TPLPAPAAEAP-QPVRPPAPPAPAKPTP-----APAPAPRPTAEQPSEPRRP 250

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>FHOD1_MOUSE (Q6P9Q4) FH1/FH2 domain-containing protein (Formin homolog|
           overexpressed in spleen) (FHOS) (Formin homology 2
           domain-containing protein 1)
          Length = 1196

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 67  SPLLASPTPDLIHGSPAPPPRGGHGMPSRPPRP 165
           SP L+S +P L  G P PPP       S PP P
Sbjct: 572 SPFLSSLSPSLSGGPPPPPPPPPPITGSCPPPP 604

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>PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9|
          Length = 728

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
 Frame = +1

Query: 25  PLAHARCSHFTAHR----SPLLASPTPDLI-HGSPAPPPRGGHGMPSRPP 159
           P A  R S F   R    +P    P+PD    G P  PP G  G+P R P
Sbjct: 273 PQAPKRESPFKDQRQDRYTPDRYGPSPDRYDQGGPGRPPNGSRGVPPRRP 322

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>KS6B2_HUMAN (Q9UBS0) Ribosomal protein S6 kinase beta-2 (EC 2.7.11.1) (S6K2)|
           (70 kDa ribosomal protein S6 kinase 2) (p70-S6KB) (p70
           ribosomal S6 kinase beta) (p70 S6Kbeta) (p70 S6 kinase
           beta) (S6K-beta) (p70-beta) (S6 kinase-related kinase)
           (SRK) (Serin
          Length = 482

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = +1

Query: 1   RAHTSLSAPLAHARCSHFTAHR-SPLLASPT----PDLIHGSPAPPPRGGHGMPSRPP 159
           R ++S   P++  + S F   R SP L  PT    P L+   P PPP     +P RPP
Sbjct: 413 RLNSSPRVPVSPLKFSPFEGFRPSPSLPEPTELPLPPLL---PPPPPSTTAPLPIRPP 467

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>DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2)
          Length = 1101

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
 Frame = +1

Query: 85  PTPDLIHGSPAPPPR----GGHGMPSRPPRPV 168
           P P L  G+P PPP     G  G+P  PP P+
Sbjct: 567 PAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPL 598

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>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor|
          Length = 1669

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +1

Query: 70  PLLASPTPDLIHGSPA-PPPRGGHGMPSRPPRP 165
           PL   P  + + GSP  P P+G  G P  P RP
Sbjct: 643 PLPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRP 675


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,331,155
Number of Sequences: 219361
Number of extensions: 581188
Number of successful extensions: 4863
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4656
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result