ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast71d02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT019246.1| Zea mays clone Contig919.F mRNA sequence Length = 1035 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 175 cggtgggagtacatcaacgccggggtgtacgtcttcgccgccgtcctcctcgtcgttggc 234 |||||||||||||||||||||||||||||| |||| || || |||||||| |||| || Sbjct: 925 cggtgggagtacatcaacgccggggtgtacatctttgcggcggtcctcctggtcggcggg 866 Query: 235 ttcctggcgcagct 248 |||||||||||||| Sbjct: 865 ttcctggcgcagct 852 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 95 ccatggtgaagctagcgacggcgcgggactgccgcgcgtacagcctcggcgc 146 ||||||||||||| ||||||||||| || |||||||| |||||||||||||| Sbjct: 1008 ccatggtgaagctggcgacggcgcgcgagtgccgcgcatacagcctcggcgc 957 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 311 tgctggcggtgaacgcgcacgacctgctggcgcacgtcgccggcgtcgattac 363 ||||||| || ||| |||||||||| || ||||||| |||||||||||||||| Sbjct: 789 tgctggccgtcaacacgcacgacctcctcgcgcacgccgccggcgtcgattac 737
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 3e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 316 gcggtgaacgcgcacgacctgctggcgcacgtcgccggcgtcgattaca 364 |||||||||||||||||||| |||||||||| |||||||||||| |||| Sbjct: 8870353 gcggtgaacgcgcacgacctcctggcgcacgccgccggcgtcgactaca 8870305 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Minus Query: 176 ggtgggagtacatcaacgccggggtgtacgtcttcgc 212 |||||||||||||||||||||||| |||||||||||| Sbjct: 8870493 ggtgggagtacatcaacgccggggcgtacgtcttcgc 8870457 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 207 cttcgccgccgtcctcctcgtcgt 230 |||||||||||||||||||||||| Sbjct: 3357914 cttcgccgccgtcctcctcgtcgt 3357937 Score = 46.1 bits (23), Expect = 0.079 Identities = 35/39 (89%) Strand = Plus / Minus Query: 97 atggtgaagctagcgacggcgcgggactgccgcgcgtac 135 ||||||||||| ||||||||| |||| ||||| |||||| Sbjct: 8870566 atggtgaagctggcgacggcgagggagtgccgggcgtac 8870528 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcgt 230 ||||||||||||||||||||| Sbjct: 20830887 cgccgccgtcctcctcgtcgt 20830907 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgcacgtcgccggcgtcgat 360 |||||||||||||||||||| Sbjct: 4096407 cgcacgtcgccggcgtcgat 4096426
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 73.8 bits (37), Expect = 3e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 316 gcggtgaacgcgcacgacctgctggcgcacgtcgccggcgtcgattaca 364 |||||||||||||||||||| |||||||||| |||||||||||| |||| Sbjct: 75371 gcggtgaacgcgcacgacctcctggcgcacgccgccggcgtcgactaca 75323 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Minus Query: 176 ggtgggagtacatcaacgccggggtgtacgtcttcgc 212 |||||||||||||||||||||||| |||||||||||| Sbjct: 75511 ggtgggagtacatcaacgccggggcgtacgtcttcgc 75475 Score = 46.1 bits (23), Expect = 0.079 Identities = 35/39 (89%) Strand = Plus / Minus Query: 97 atggtgaagctagcgacggcgcgggactgccgcgcgtac 135 ||||||||||| ||||||||| |||| ||||| |||||| Sbjct: 75584 atggtgaagctggcgacggcgagggagtgccgggcgtac 75546
>dbj|AK103494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130P11, full insert sequence Length = 1159 Score = 73.8 bits (37), Expect = 3e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 316 gcggtgaacgcgcacgacctgctggcgcacgtcgccggcgtcgattaca 364 |||||||||||||||||||| |||||||||| |||||||||||| |||| Sbjct: 267 gcggtgaacgcgcacgacctcctggcgcacgccgccggcgtcgactaca 315 Score = 65.9 bits (33), Expect = 9e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 176 ggtgggagtacatcaacgccggggtgtacgtcttcgc 212 |||||||||||||||||||||||| |||||||||||| Sbjct: 127 ggtgggagtacatcaacgccggggcgtacgtcttcgc 163 Score = 46.1 bits (23), Expect = 0.079 Identities = 35/39 (89%) Strand = Plus / Plus Query: 97 atggtgaagctagcgacggcgcgggactgccgcgcgtac 135 ||||||||||| ||||||||| |||| ||||| |||||| Sbjct: 54 atggtgaagctggcgacggcgagggagtgccgggcgtac 92
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 172 cggcggtgggagtacatcaacgccggggtgtacgtcttcgc 212 |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 18041 cggcggtgggagtacatcaacgccggggcgtacgtgttcgc 18081
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 172 cggcggtgggagtacatcaacgccggggtgtacgtcttcgc 212 |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 29007986 cggcggtgggagtacatcaacgccggggcgtacgtgttcgc 29008026 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cttcgccgccgtcctcctcg 226 |||||||||||||||||||| Sbjct: 28277569 cttcgccgccgtcctcctcg 28277550 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 18344013 tcgccgccgtcctcctcgtc 18343994
>ref|XM_464198.1| Oryza sativa (japonica cultivar-group), mRNA Length = 645 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 207 cttcgccgccgtcctcctcgtcgt 230 |||||||||||||||||||||||| Sbjct: 404 cttcgccgccgtcctcctcgtcgt 427
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 207 cttcgccgccgtcctcctcgtcgt 230 |||||||||||||||||||||||| Sbjct: 106774 cttcgccgccgtcctcctcgtcgt 106797
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.079 Identities = 23/23 (100%) Strand = Plus / Plus Query: 336 gctggcgcacgtcgccggcgtcg 358 ||||||||||||||||||||||| Sbjct: 2844194 gctggcgcacgtcgccggcgtcg 2844216 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cagcctcggcgcggccggcg 154 |||||||||||||||||||| Sbjct: 1543623 cagcctcggcgcggccggcg 1543604
>gb|AE004796.1| Pseudomonas aeruginosa PAO1, section 357 of 529 of the complete genome Length = 12098 Score = 46.1 bits (23), Expect = 0.079 Identities = 23/23 (100%) Strand = Plus / Plus Query: 249 gtggccgtgggcggtgtccacca 271 ||||||||||||||||||||||| Sbjct: 2483 gtggccgtgggcggtgtccacca 2505
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gctgctgggcgtgctggcggtg 321 |||||||||||||||||||||| Sbjct: 1900007 gctgctgggcgtgctggcggtg 1900028
>ref|XM_445716.1| Candida glabrata CBS138, CAGL0E00649g partial mRNA Length = 1476 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 tcgggctgctgggcgtgctggcggtg 321 ||||||||| |||||||||||||||| Sbjct: 69 tcgggctgcggggcgtgctggcggtg 94
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 296 tcgggctgctgggcgtgctggcggtg 321 ||||||||| |||||||||||||||| Sbjct: 61054 tcgggctgcggggcgtgctggcggtg 61029
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 281 tcgcggtggccgtcgtcgggctgctgggcg 310 ||||| |||| ||||||||||||||||||| Sbjct: 129890 tcgcgctggcggtcgtcgggctgctgggcg 129861
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 137 gcctcggcgcggccggcggcgagacg 162 |||||||||||| ||||||||||||| Sbjct: 2722036 gcctcggcgcggtcggcggcgagacg 2722061
>gb|AE004970.1| Halobacterium sp. NRC-1 section 1 of 170 of the complete genome Length = 12825 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 ggagtacatcaacgccggggtgtacg 205 |||||||||||||||||| ||||||| Sbjct: 8150 ggagtacatcaacgccggcgtgtacg 8125
>gb|AY108777.1| Zea mays PCO139596 mRNA sequence Length = 496 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 gcagctgtggccgtgggcggtg 264 |||||||||||||||||||||| Sbjct: 150 gcagctgtggccgtgggcggtg 129
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gctgctgggcgtgctggcggtg 321 |||||||||||||||||||||| Sbjct: 4722541 gctgctgggcgtgctggcggtg 4722520 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 gctgtggccgtgggcggtgtccacca 271 ||||||||||||||||||||| |||| Sbjct: 1373522 gctgtggccgtgggcggtgtcgacca 1373547
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA Length = 1437 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 gtggccgtcgtcgggctgctgggcg 310 ||||||||||||| ||||||||||| Sbjct: 121 gtggccgtcgtcgtgctgctgggcg 145
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 gtggccgtcgtcgggctgctgggcg 310 ||||||||||||| ||||||||||| Sbjct: 121 gtggccgtcgtcgtgctgctgggcg 145
>ref|XM_466169.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2240 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcgt 230 ||||||||||||||||||||| Sbjct: 130 cgccgccgtcctcctcgtcgt 150
>ref|XM_506821.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_H01.22 mRNA Length = 2266 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcgt 230 ||||||||||||||||||||| Sbjct: 156 cgccgccgtcctcctcgtcgt 176
>ref|NM_191721.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 cgccgccgtcctcctcgtcgt 230 ||||||||||||||||||||| Sbjct: 133 cgccgccgtcctcctcgtcgt 113
>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene cluster, complete sequence Length = 84868 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cgcggccggcggcgagacgtcgcgc 168 |||||||||||||| |||||||||| Sbjct: 59656 cgcggccggcggcgcgacgtcgcgc 59632
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ggccggcctcgcggtggccgt 293 ||||||||||||||||||||| Sbjct: 31395 ggccggcctcgcggtggccgt 31415
>gb|DQ337730.1| Uncultured bacterium clone Bsedi_nirK-10 NirK (nirK) gene, partial cds Length = 473 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 ccagatcgccgtgtccgccga 24 ||||||||||||||||||||| Sbjct: 331 ccagatcgccgtgtccgccga 311
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 gtggccgtcgtcgggctgctgggcg 310 ||||||||||||| ||||||||||| Sbjct: 27868019 gtggccgtcgtcgtgctgctgggcg 27868043
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 cgccgccgtcctcctcgtcgt 230 ||||||||||||||||||||| Sbjct: 29604333 cgccgccgtcctcctcgtcgt 29604313 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcgcgtacagcctcggcgcg 147 |||||||||||||||||||| Sbjct: 29146637 gcgcgtacagcctcggcgcg 29146618 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 18091280 cgccgccgtcctcctcgtcg 18091299 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 6395137 tcgccgccgtcctcctcgtc 6395118
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 cctcggcgcggccggcggcgagacg 162 ||||||||||||||||| ||||||| Sbjct: 3983045 cctcggcgcggccggcgtcgagacg 3983069
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 cgccgccgtcctcctcgtcgt 230 ||||||||||||||||||||| Sbjct: 74153 cgccgccgtcctcctcgtcgt 74133
>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_H01 Length = 121377 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcgt 230 ||||||||||||||||||||| Sbjct: 73348 cgccgccgtcctcctcgtcgt 73368
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 gtggccgtcgtcgggctgctgggcg 310 ||||||||||||| ||||||||||| Sbjct: 76097 gtggccgtcgtcgtgctgctgggcg 76121
>gb|AF184899.1|AF184899 Streptomyces lividans putative xylose operon regulator (xylR), xylulokinase (xylB), and xylose isomerase (xylA) genes, complete cds Length = 5340 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 ggccggcctcgcggtggccgt 293 ||||||||||||||||||||| Sbjct: 1374 ggccggcctcgcggtggccgt 1354
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full insert sequence Length = 1351 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 gtggccgtcgtcgggctgctgggcg 310 ||||||||||||| ||||||||||| Sbjct: 35 gtggccgtcgtcgtgctgctgggcg 59
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full insert sequence Length = 1437 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 gtggccgtcgtcgggctgctgggcg 310 ||||||||||||| ||||||||||| Sbjct: 121 gtggccgtcgtcgtgctgctgggcg 145
>dbj|AK099161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068L16, full insert sequence Length = 2240 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcgt 230 ||||||||||||||||||||| Sbjct: 130 cgccgccgtcctcctcgtcgt 150
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full insert sequence Length = 1437 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 gtggccgtcgtcgggctgctgggcg 310 ||||||||||||| ||||||||||| Sbjct: 121 gtggccgtcgtcgtgctgctgggcg 145
>dbj|AK067736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117E08, full insert sequence Length = 2265 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcgt 230 ||||||||||||||||||||| Sbjct: 155 cgccgccgtcctcctcgtcgt 175
>tpe|BN000547.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx18 gene for class III peroxidase 18 precursor, exons 1-3 Length = 1289 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 cgccgccgtcctcctcgtcgt 230 ||||||||||||||||||||| Sbjct: 133 cgccgccgtcctcctcgtcgt 113
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtcg 229 ||||||||||||||||||||| Sbjct: 32302 tcgccgccgtcctcctcgtcg 32282
>gb|AF079139.1|AF079139 Streptomyces venezuelae pikCD operon, complete sequence Length = 4342 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 cctcggcgcggccggcggcga 158 ||||||||||||||||||||| Sbjct: 2245 cctcggcgcggccggcggcga 2265
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and ORF19 Length = 86080 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cgcggccggcggcgagacgtcgcgc 168 |||||||||||||| |||||||||| Sbjct: 59574 cgcggccggcggcgcgacgtcgcgc 59550
>gb|AC123613.16| Mus musculus chromosome 1, clone RP23-434L2, complete sequence Length = 204785 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 129747 tcgccgccgtcctcctcgtc 129728
>ref|XM_475175.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1581 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 908 tcgccgccgtcctcctcgtc 889
>ref|XM_464320.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1237 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgcacgtcgccggcgtcgat 360 |||||||||||||||||||| Sbjct: 571 cgcacgtcgccggcgtcgat 590
>ref|NM_197572.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0064P21.6), mRNA Length = 2499 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cggccggcggcgagacgtcg 165 |||||||||||||||||||| Sbjct: 209 cggccggcggcgagacgtcg 228
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ggccgtcgtcgggctgctgg 307 |||||||||||||||||||| Sbjct: 2994758 ggccgtcgtcgggctgctgg 2994777
>ref|NM_192227.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcgcgtacagcctcggcgcg 147 |||||||||||||||||||| Sbjct: 547 gcgcgtacagcctcggcgcg 528
>ref|NM_193780.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 193 cgccgccgtcctcctcgtcg 174
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tcgtcgttggcttcctggcg 243 |||||||||||||||||||| Sbjct: 96733 tcgtcgttggcttcctggcg 96752
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cttcgccgccgtcctcctcg 226 |||||||||||||||||||| Sbjct: 61811 cttcgccgccgtcctcctcg 61792
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cctcggcgcggccggcggcg 157 |||||||||||||||||||| Sbjct: 46085 cctcggcgcggccggcggcg 46104
>gb|BC060143.1| Mus musculus actin related protein 2/3 complex, subunit 5, mRNA (cDNA clone MGC:64804 IMAGE:6411792), complete cds Length = 1843 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 184 tcgccgccgtcctcctcgtc 165
>gb|AC132919.9| Mus musculus chromosome 12, clone RP24-356H3, complete sequence Length = 163965 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 37755 tcgccgccgtcctcctcgtc 37774
>ref|NM_026369.1| Mus musculus actin related protein 2/3 complex, subunit 5 (Arpc5), mRNA Length = 1782 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 169 tcgccgccgtcctcctcgtc 150
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 137225 tcgccgccgtcctcctcgtc 137206
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tcgtcgttggcttcctggcg 243 |||||||||||||||||||| Sbjct: 29042558 tcgtcgttggcttcctggcg 29042539
>ref|XM_973076.1| PREDICTED: Mus musculus similar to actin related protein 2/3 complex, subunit 5 (LOC383189), mRNA Length = 610 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 153 tcgccgccgtcctcctcgtc 134
>ref|XM_911478.2| PREDICTED: Mus musculus similar to actin related protein 2/3 complex, subunit 5 (LOC629364), mRNA Length = 1741 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 169 tcgccgccgtcctcctcgtc 150
>ref|XM_356911.3| PREDICTED: Mus musculus similar to actin related protein 2/3 complex, subunit 5 (LOC383189), mRNA Length = 610 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 153 tcgccgccgtcctcctcgtc 134
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tgctgggcgtgctggcggtg 321 |||||||||||||||||||| Sbjct: 1977489 tgctgggcgtgctggcggtg 1977470
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cgacctgctggcgcacgtcg 349 |||||||||||||||||||| Sbjct: 1707983 cgacctgctggcgcacgtcg 1707964
>gb|AC091752.2| Rattus norvegicus strain Brown Norway clone RP31-202M22, complete sequence Length = 109982 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 29749 tcgccgccgtcctcctcgtc 29730
>gb|AY195830.1| Uncultured bacterium clone M305044 NirK (nirK) gene, partial cds Length = 306 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 atcgccgtgtccgccgacca 27 |||||||||||||||||||| Sbjct: 303 atcgccgtgtccgccgacca 284
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcctcggcgcggccggcggc 156 |||||||||||||||||||| Sbjct: 1953142 gcctcggcgcggccggcggc 1953161
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 tcctcctcgtcgttggcttcctgg 241 ||||||||||||||||| |||||| Sbjct: 248394 tcctcctcgtcgttggcctcctgg 248417
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 tcctcctcgtcgttggcttcctgg 241 ||||||||||||||||| |||||| Sbjct: 186107 tcctcctcgtcgttggcctcctgg 186130
>gb|AY179964.1| Stenotrophomonas maltophilia phosphoglucomutase (spgM) gene, complete cds Length = 1983 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cctcggcgcggccggcggcg 157 |||||||||||||||||||| Sbjct: 840 cctcggcgcggccggcggcg 859
>emb|AJ421798.1|SCA421798 Streptomyces cattleya thienamycin gene cluster Length = 32329 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gcgcacgacctgctggcgca 344 |||||||||||||||||||| Sbjct: 10394 gcgcacgacctgctggcgca 10413
>ref|NM_205379.1| Gallus gallus TGFB-induced factor (TALE family homeobox) (TGIF), mRNA Length = 1335 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 tcttcgccgccgtcctcctcgtcg 229 ||||||||||| |||||||||||| Sbjct: 160 tcttcgccgccctcctcctcgtcg 183
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 ggccggcctcgcggtggccgtcgt 296 |||||||||||||||| ||||||| Sbjct: 4718659 ggccggcctcgcggtgcccgtcgt 4718636
>gb|AE012371.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 279 of 460 of the complete genome Length = 10772 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 aggccggcctcgcggtggccgtcg 295 |||||||||||||||| ||||||| Sbjct: 8160 aggccggcctcgcggtagccgtcg 8137
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cttcaactcctccaccgcag 50 |||||||||||||||||||| Sbjct: 492881 cttcaactcctccaccgcag 492862
>dbj|AK149756.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530015E02 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1764 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 147 tcgccgccgtcctcctcgtc 128
>dbj|AK159438.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420020A16 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1756 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 142 tcgccgccgtcctcctcgtc 123
>dbj|AK159407.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420019H11 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1816 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 202 tcgccgccgtcctcctcgtc 183
>dbj|AK151656.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032M05 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 168 tcgccgccgtcctcctcgtc 149
>dbj|AK151654.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032L18 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1738 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 146 tcgccgccgtcctcctcgtc 127
>dbj|AK150703.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830013N15 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1769 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 155 tcgccgccgtcctcctcgtc 136
>dbj|AK151490.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830030O12 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1577 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 140 tcgccgccgtcctcctcgtc 121
>dbj|AK150443.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830007L21 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1769 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 155 tcgccgccgtcctcctcgtc 136
>dbj|AK166725.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0007G16 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 169 tcgccgccgtcctcctcgtc 150
>dbj|AK152281.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830058F19 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 168 tcgccgccgtcctcctcgtc 149
>dbj|AK168986.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920070F23 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1731 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 117 tcgccgccgtcctcctcgtc 98
>dbj|AK153262.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830130C02 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1763 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 149 tcgccgccgtcctcctcgtc 130
>dbj|AK159738.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420029F17 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1779 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 165 tcgccgccgtcctcctcgtc 146
>dbj|AK166284.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830031C13 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1764 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 170 tcgccgccgtcctcctcgtc 151
>dbj|AK166335.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830042E10 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1800 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 185 tcgccgccgtcctcctcgtc 166
>dbj|AK168264.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730074C06 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1738 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 146 tcgccgccgtcctcctcgtc 127
>dbj|AK167916.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730037L11 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 671 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 139 tcgccgccgtcctcctcgtc 120
>dbj|AK166919.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0023A16 product:actin related protein 2/3 complex, subunit 5, full insert sequence Length = 1721 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 171 tcgccgccgtcctcctcgtc 152
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete sequence Length = 142114 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cggccggcggcgagacgtcg 165 |||||||||||||||||||| Sbjct: 22601 cggccggcggcgagacgtcg 22620
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 aggccggcctcgcggtggccgtcg 295 |||||||||||||||| ||||||| Sbjct: 1827433 aggccggcctcgcggtagccgtcg 1827456
>dbj|AK087427.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130103M11 product:actin related protein 2/3 complex, subunit 5 (165 kDa), full insert sequence Length = 1689 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 145 tcgccgccgtcctcctcgtc 126
>dbj|AK019149.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610001I19 product:actin related protein 2/3 complex, subunit 5 (165 kDa), full insert sequence Length = 687 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 155 tcgccgccgtcctcctcgtc 136
>dbj|AK008097.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010004J17 product:actin related protein 2/3 complex, subunit 5 (165 kDa), full insert sequence Length = 1782 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 169 tcgccgccgtcctcctcgtc 150
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 387950 cgccgccgtcctcctcgtcg 387969
>dbj|AK011911.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610207J02 product:actin related protein 2/3 complex, subunit 5 (165 kDa), full insert sequence Length = 687 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 155 tcgccgccgtcctcctcgtc 136
>dbj|AK017985.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830443F10 product:actin related protein 2/3 complex, subunit 5 (165 kDa), full insert sequence Length = 1803 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 189 tcgccgccgtcctcctcgtc 170
>dbj|AK017669.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730456K02 product:actin related protein 2/3 complex, subunit 5 (165 kDa), full insert sequence Length = 1770 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 156 tcgccgccgtcctcctcgtc 137
>dbj|AK011348.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610008G24 product:actin related protein 2/3 complex, subunit 5 (165 kDa), full insert sequence Length = 687 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 155 tcgccgccgtcctcctcgtc 136
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 11538878 cgccgccgtcctcctcgtcg 11538897
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cggccggcggcgagacgtcg 165 |||||||||||||||||||| Sbjct: 20517311 cggccggcggcgagacgtcg 20517330
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 9584842 cgccgccgtcctcctcgtcg 9584823
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 11642655 cgccgccgtcctcctcgtcg 11642636
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tcgtcgttggcttcctggcg 243 |||||||||||||||||||| Sbjct: 29133980 tcgtcgttggcttcctggcg 29133961
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tgctgggcgtgctggcggtg 321 |||||||||||||||||||| Sbjct: 7862850 tgctgggcgtgctggcggtg 7862831
>ref|XM_577244.1| PREDICTED: Rattus norvegicus similar to ARP2/3 complex 16 kDa subunit (p16-ARC) (Actin-related protein 2/3 complex subunit 5) (LOC501832), mRNA Length = 378 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 95 tcgccgccgtcctcctcgtc 76
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcgcgtacagcctcggcgcg 147 |||||||||||||||||||| Sbjct: 107003 gcgcgtacagcctcggcgcg 106984
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 118521 cgccgccgtcctcctcgtcg 118540
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 67721 cgccgccgtcctcctcgtcg 67740
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 17532 tcgccgccgtcctcctcgtc 17513
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 166203 tcgccgccgtcctcctcgtc 166184
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cctcggcgcggccggcggcg 157 |||||||||||||||||||| Sbjct: 191508 cctcggcgcggccggcggcg 191489
>dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0414E10 Length = 141760 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 120541 cgccgccgtcctcctcgtcg 120522
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgcacgtcgccggcgtcgat 360 |||||||||||||||||||| Sbjct: 6421 cgcacgtcgccggcgtcgat 6440
>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1059D01 Length = 158792 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 92572 cgccgccgtcctcctcgtcg 92553
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgcacgtcgccggcgtcgat 360 |||||||||||||||||||| Sbjct: 143073 cgcacgtcgccggcgtcgat 143092
>dbj|AK121349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K16, full insert sequence Length = 2034 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tcgtcgttggcttcctggcg 243 |||||||||||||||||||| Sbjct: 347 tcgtcgttggcttcctggcg 366
>dbj|AK120628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153C17, full insert sequence Length = 2784 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cggccggcggcgagacgtcg 165 |||||||||||||||||||| Sbjct: 246 cggccggcggcgagacgtcg 265
>ref|XM_308984.2| Anopheles gambiae str. PEST ENSANGP00000020260 (ENSANGG00000017771), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gctgctgggcgtgctggcgg 319 |||||||||||||||||||| Sbjct: 1208 gctgctgggcgtgctggcgg 1189
>dbj|AK107158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E10, full insert sequence Length = 1711 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 729 tcgccgccgtcctcctcgtc 748
>dbj|AK107084.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G02, full insert sequence Length = 1893 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 938 tcgccgccgtcctcctcgtc 919
>dbj|AK106641.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E05, full insert sequence Length = 1749 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 cgcacgtcgccggcgtcgat 360 |||||||||||||||||||| Sbjct: 970 cgcacgtcgccggcgtcgat 951
>dbj|AK099917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116I02, full insert sequence Length = 1430 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcgcgtacagcctcggcgcg 147 |||||||||||||||||||| Sbjct: 578 gcgcgtacagcctcggcgcg 559
>dbj|AK072843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O11, full insert sequence Length = 1237 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgcacgtcgccggcgtcgat 360 |||||||||||||||||||| Sbjct: 571 cgcacgtcgccggcgtcgat 590
>dbj|AK069643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027O19, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gcgcgtacagcctcggcgcg 147 |||||||||||||||||||| Sbjct: 75 gcgcgtacagcctcggcgcg 56
>dbj|AK065777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036N21, full insert sequence Length = 3002 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tcgtcgttggcttcctggcg 243 |||||||||||||||||||| Sbjct: 363 tcgtcgttggcttcctggcg 382
>gb|BC099238.1| Rattus norvegicus actin related protein 2/3 complex, subunit 5, mRNA (cDNA clone MGC:116419 IMAGE:7445509), complete cds Length = 1778 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 157 tcgccgccgtcctcctcgtc 138
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 acgcgcacgacctgctggcg 342 |||||||||||||||||||| Sbjct: 3570447 acgcgcacgacctgctggcg 3570428 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcaacgccggggtgtacgtcttcg 211 |||||||||||||||||| ||||| Sbjct: 1022402 tcaacgccggggtgtacgccttcg 1022379
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cggccggcggcgagacgtcg 165 |||||||||||||||||||| Sbjct: 20528583 cggccggcggcgagacgtcg 20528602
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 11538549 cgccgccgtcctcctcgtcg 11538568
>ref|NM_001025717.1| Rattus norvegicus actin related protein 2/3 complex, subunit 5 (Arpc5), mRNA Length = 1778 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 157 tcgccgccgtcctcctcgtc 138
>emb|CR450261.1| Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0013J10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 16142 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cgccgccgtcctcctcgtcg 229 |||||||||||||||||||| Sbjct: 2759 cgccgccgtcctcctcgtcg 2778
>gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, complete sequence Length = 181443 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 25711 tcgccgccgtcctcctcgtc 25692
>gb|AC125067.4| Mus musculus BAC clone RP23-431C5 from 12, complete sequence Length = 192938 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tcgccgccgtcctcctcgtc 228 |||||||||||||||||||| Sbjct: 36238 tcgccgccgtcctcctcgtc 36257
>gb|U25353.1|GGU25353 Gallus gallus homeodomain protein AKR mRNA, complete cds Length = 1335 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 tcttcgccgccgtcctcctcgtcg 229 ||||||||||| |||||||||||| Sbjct: 160 tcttcgccgccctcctcctcgtcg 183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,446,183 Number of Sequences: 3902068 Number of extensions: 2446183 Number of successful extensions: 66182 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62237 Number of HSP's gapped (non-prelim): 3945 length of query: 367 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 345 effective length of database: 17,147,199,772 effective search space: 5915783921340 effective search space used: 5915783921340 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
