>ATG9A_MOUSE (Q68FE2) Autophagy-related protein 9A (APG9-like 1)|
          Length = 551

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = +1

Query: 91  SHFLPPPSG---EAILQGVYIRARGDRNHRHAVTR*GVHARSPLF-SSCSAWWCWREQSI 258
           SH LPPPSG     +L  +Y R RG   H    +      RSP + SS + W   R  S+
Sbjct: 470 SHLLPPPSGPGDHRLLPQLYGRGRGCGRHLLLCS----DGRSPAWPSSVAVWRADRGLSV 525

Query: 259 PSTRIR 276
           P++R R
Sbjct: 526 PASRGR 531

>MBD5_HUMAN (Q9P267) Methyl-CpG-binding domain protein 5 (Methyl-CpG-binding|
           protein MBD5)
          Length = 1494

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 70  LPCRAKLSHFLPPPSGEAILQGVYIRARGDRNHRHAVTR*GVHARSPL 213
           LPC A   HF  P    ++LQ + +  RG+  H H      VH+ SP+
Sbjct: 730 LPCSANQLHFTDPSMNSSVLQNIPL--RGEAVHCHNANTNFVHSNSPV 775

>BPA1_HUMAN (Q03001) Bullous pemphigoid antigen 1 isoforms 1/2/3/4/5/8 (230 kDa|
            bullous pemphigoid antigen) (BPA) (Hemidesmosomal plaque
            protein) (Dystonia musculorum protein) (Dystonin)
            (Fragment)
          Length = 3214

 Score = 32.3 bits (72), Expect = 0.55
 Identities = 23/66 (34%), Positives = 31/66 (46%)
 Frame = -2

Query: 219  GEER*SCVNSSSCHRVSVVAITTGSYVDTLQNCFPGRRGEEVRELRPAGQWYLYPNSTSF 40
            GE   S +N    HR+SVV   TGS + T+   F     E+   L  +GQ Y +  +  F
Sbjct: 2889 GERNISNLNVKKTHRISVVDTKTGSEL-TVYEAFQRNLIEKSIYLELSGQQYQWKEAMFF 2947

Query: 39   SSRGES 22
             S G S
Sbjct: 2948 ESYGHS 2953

>BGLX_ERWCH (Q46684) Periplasmic beta-glucosidase/beta-xylosidase precursor|
           [Includes: Beta-glucosidase (EC 3.2.1.21) (Gentiobiase)
           (Cellobiase); Beta-xylosidase (EC 3.2.1.37)
           (1,4-beta-D-xylan xylohydrolase) (Xylan
           1,4-beta-xylosidase)]
          Length = 654

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = +3

Query: 264 YKDPNQPLAVRIKDLLGRMTLAEKIGQM 347
           Y+D   P A R  DL+ RMTLAEK G M
Sbjct: 58  YEDWRLPAAERAADLVSRMTLAEKAGVM 85

>TALA_POVMA (P03073) Large T antigen|
          Length = 785

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = -2

Query: 381 PLPWHSPSQSESSGRSFRQ---ESSGQADP*CE-RREAGSDPCTWDTLLSPTPPSR 226
           P P+HS   SES G S      E S ++DP CE   E+ S  C+  +  + TPP +
Sbjct: 228 PPPYHSQGGSESMGGSDSSGFAEGSFRSDPRCESENESYSQSCS-QSSFNATPPKK 282

>TALA_POVM3 (P03074) Large T antigen|
          Length = 782

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = -2

Query: 381 PLPWHSPSQSESSGRSFRQ---ESSGQADP*CE-RREAGSDPCTWDTLLSPTPPSR 226
           P P+HS   SES G S      E S ++DP CE   E+ S  C+  +  + TPP +
Sbjct: 228 PPPYHSQGGSESMGGSDSSGFAEGSFRSDPRCESENESYSQSCS-QSSFNATPPKK 282

>INH_PSEAE (Q03026) Proteinase inhibitor precursor (Aprin)|
          Length = 131

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 22/43 (51%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -3

Query: 179 TACL--WLRS-PRALM*TPCKIASPEGGGRK*ESFARQGSGIY 60
           TACL  WL S PRA   TP  IA  E GG       RQG G Y
Sbjct: 72  TACLTRWLPSEPRAWRPTPAGIALLERGGLTLMLLGRQGEGDY 114

>T240L_HUMAN (Q71F56) Thyroid hormone receptor-associated protein 2 (Thyroid|
           hormone receptor-associated protein complex 240 kDa
           component-like)
          Length = 2210

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = +3

Query: 21  CSRHGKRKKCC*GINT---------TALPGEALSLPPPSFRGSNFARCLHKSPW*SQPQT 173
           CSRH   K+C  G N          +A P  + SLPPP       A   HK+   ++ Q 
Sbjct: 425 CSRHKLLKRCAVGPNRPPTVSQPGFSAGPSSSSSLPPP-------ASSKHKT---AERQE 474

Query: 174 RGDKMR 191
           +GDK++
Sbjct: 475 KGDKLQ 480

>RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C2PA)|
          Length = 966

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -2

Query: 393 IWTWPLPWHSPSQSESSGRSFRQESSGQAD-P*CERREAGSDPCTWDTLLSPTPP 232
           I T P P  SP  S S      Q SS   + P C+   AG +  + D LLS  PP
Sbjct: 517 IATCPKPPQSPETSTSKDSPPGQGSSPTTELPSCQGLPAGQESTSQDPLLSQEPP 571

>HDA10_HUMAN (Q969S8) Histone deacetylase 10 (HD10)|
          Length = 669

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = +2

Query: 5   ATPWKMLSPREEKEVLLGYKYHCPAGRSSLTSSPLLPGKQFCKVST*EP 151
           A  WK L  ++   V +    H P GR      PLLPG   CK +   P
Sbjct: 351 APHWKSLQQQDVTAVPMSPSSHSPEGRPP----PLLPGGPVCKAAASAP 395

>SID4_SCHPO (O60187) Septation initiation protein sid4|
          Length = 660

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 41  KEVLLGYKYHCPAGRSSLTSSPLLPGKQFCK 133
           K++L+  + +CP   S+  S+PL P K+F K
Sbjct: 353 KQLLMNQQDYCPTTMSTTVSTPLCPPKRFPK 383

>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 248  SRVSQV-QGSEPASRRSH-QGSAWPDDSCRKDRPDDSD*EGECHGRGH 385
            SR SQ  QG    SRRS  QGS+   DS  +  P+DS+   E   R H
Sbjct: 3840 SRHSQSGQGESAGSRRSRRQGSSVSQDSDSEAYPEDSERRSESASRNH 3887

>MDR16_ARATH (Q9FWX8) Multidrug resistance protein 16 (P-glycoprotein 12)|
          Length = 1229

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 389 GHGLCRGIHPLNLSHLADLFGKSHPAKQILDANGERLVRILVLGI 255
           G+G+C  +  L    L D FGK+   K I+D   +  ++ + LG+
Sbjct: 10  GNGVCLPLMTLLFGDLIDSFGKNQNNKDIVDVVSKVCLKFVYLGL 54

>PURA_THET8 (Q5SLS1) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 408

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 258 PKYKDPNQPLAVRIKDLLGRMTLAEKIGQMTQIERVNATAEA 383
           P Y D  + + +R  DLL   TL E++ ++   E+ N+T EA
Sbjct: 127 PAYSDRARRVGIRAGDLLDEATLRERVRRLL-AEKPNSTREA 167

>PURA_THET2 (Q72GT4) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 408

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 258 PKYKDPNQPLAVRIKDLLGRMTLAEKIGQMTQIERVNATAEA 383
           P Y D  + + +R  DLL   TL E++ ++   E+ N+T EA
Sbjct: 127 PAYSDRARRVGIRAGDLLDEATLRERVRRLL-AEKPNSTREA 167

>POLG_MCFA (P33515) Genome polyprotein [Contains: Capsid protein C (Core|
            protein); Envelope protein M (Matrix protein); Major
            envelope protein E; Nonstructural protein 1 (NS1);
            Nonstructural protein 2A (NS2A); Flavivirin protease NS2B
            regulatory subunit;
          Length = 3341

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 359  EGECHGRGHVQILHRQRAEWWRQRACT 439
            +  CHGR H Q++     E W  ++CT
Sbjct: 1012 DSRCHGRMHAQVIGPNDTESWCCQSCT 1038

>DGKM_CAEEL (Q10024) Putative diacylglycerol kinase K06A1.6 (EC 2.7.1.107)|
           (Diglyceride kinase) (DGK) (DAG kinase)
          Length = 937

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 171 TRGDKMRSSRKITSLLLMFCLVVLARAEYPKYKD 272
           TR  +  S  + TSL++   ++V+ RA+Y  YKD
Sbjct: 761 TRYGQKDSQVQSTSLIIQLPVIVVGRADYDNYKD 794


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,239,481
Number of Sequences: 219361
Number of extensions: 1654074
Number of successful extensions: 5074
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5070
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)