| Clone Name | bast71c07 |
|---|---|
| Clone Library Name | barley_pub |
>LEA29_GOSHI (P13940) Late embryogenesis abundant protein D-29 (LEA D-29)| Length = 302 Score = 34.7 bits (78), Expect = 0.098 Identities = 20/58 (34%), Positives = 26/58 (44%) Frame = +3 Query: 255 ESWAGWAKDKISEGLGLDKISEGLGLKHHADEEEAARKAGHNVKSARETAQHAASETG 428 ESW WAK+KISEGLG + + G E+A ++ Q AS G Sbjct: 95 ESWTEWAKEKISEGLGFKQDDDPKG-----SVEKAFDSVADTATKTKDKLQDMASGAG 147
>SYFB_SILPO (Q5LMS3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 798 Score = 31.6 bits (70), Expect = 0.83 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +3 Query: 270 WAKDKISEGLGLDKISEGL---GLKHHADEEEAARKAGHNVKSARETAQH 410 W KD + +D+I+E L GL+ E AAR AG + + +QH Sbjct: 7 WLKDHLDTTASVDEIAEALTDLGLEVEGIENPAARLAGFTLAHVKSASQH 56
>ILVD_ZYMMO (Q5NLJ4) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 618 Score = 30.8 bits (68), Expect = 1.4 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +3 Query: 285 ISEGLGLDKISEGLGLKHHADEEEAARKAGHNV 383 ++E LGL G L H+D E+ RKAGH + Sbjct: 207 LTEALGLSFPGNGSMLATHSDREQLFRKAGHTI 239
>SYD_CORDI (Q6NGZ4) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 601 Score = 29.3 bits (64), Expect = 4.1 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 4/72 (5%) Frame = +3 Query: 222 DGAEVAPGKEEESWAGWAKDKISEGLGLDKISEGLGL----KHHADEEEAARKAGHNVKS 389 DG P ++ ++W WAK + ++GL + E L + +EE A A H Sbjct: 324 DGGASQPRRQLDAWQEWAKQRGAKGLAYILVGENGELTGPVSKNITDEERAGIAAHVGAK 383 Query: 390 ARETAQHAASET 425 + AA ET Sbjct: 384 PGDCIFFAAGET 395
>MIER1_XENLA (Q7T105) Mesoderm induction early response protein 1 (Mi-er1)| (Xmi-er1) (Early response 1) (Er1) Length = 495 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 11/53 (20%) Frame = +3 Query: 273 AKDKISEGLGLDKISEGLGLKHHA-----------DEEEAARKAGHNVKSARE 398 A + E GLD I EG +K + D EEA R+ NVK+ARE Sbjct: 222 ASRRTCEERGLDAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAARE 274
>MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupled receptor 50)| (H9) Length = 613 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 310 LSRPSPSEILSLAHPAHDSSSLPGATSAPS 221 LS EI ++AHP D S LP + S+P+ Sbjct: 535 LSASHCPEIPAIAHPVSDDSDLPESASSPA 564
>Y1570_METJA (Q58965) Hypothetical protein MJ1570| Length = 115 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +3 Query: 255 ESWAGWAKDKISEGLGLDKISEGLGLKHHAD 347 ++W W + ++E +G DK+S GL H AD Sbjct: 34 DAWGEWGPEDVAEKVGEDKVS---GLLHLAD 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,136,518 Number of Sequences: 219361 Number of extensions: 344309 Number of successful extensions: 1546 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1527 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1545 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)