ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast71c06 |
|---|---|
| Clone Library Name | barley_pub |
>HAT5_ARATH (Q02283) Homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5)| (HD-ZIP protein ATHB-1) Length = 272 Score = 96.7 bits (239), Expect = 2e-20 Identities = 60/123 (48%), Positives = 68/123 (55%), Gaps = 6/123 (4%) Frame = +1 Query: 76 MEPGRLIFNTSGSGNGQMLFMDC------GAGAAGMFHRGVRPVLGGMEEGRGVKRPFFT 237 ME F+ S S M F+ G GA M + MEE +RPFF+ Sbjct: 1 MESNSFFFDPSASHGNSMFFLGNLNPVVQGGGARSMMN---------MEE-TSKRRPFFS 50 Query: 238 SXXXXXXXXXXXXXXXXKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVA 417 S KKRRLT EQVHLLE+SFE ENKLEPERKT+LA+KLGLQPRQVA Sbjct: 51 SPEDLYDDDFYDDQLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVA 110 Query: 418 VWF 426 VWF Sbjct: 111 VWF 113
>ATHB6_ARATH (P46668) Homeobox-leucine zipper protein ATHB-6 (Homeodomain| transcription factor ATHB-6) (HD-ZIP protein ATHB-6) Length = 311 Score = 70.9 bits (172), Expect = 1e-12 Identities = 34/46 (73%), Positives = 40/46 (86%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KKRRL+ QV LE++FE ENKLEPERK +LA++LGLQPRQVAVWF Sbjct: 62 KKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWF 107
>ATHB5_ARATH (P46667) Homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein| ATHB-5) Length = 312 Score = 70.5 bits (171), Expect = 2e-12 Identities = 33/46 (71%), Positives = 40/46 (86%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KKRRL EQV LE++FE +NKLEPERK +LA++LGLQPRQVA+WF Sbjct: 72 KKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWF 117
>HAT7_ARATH (Q00466) Homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)| (HD-ZIP protein ATHB-3) Length = 314 Score = 68.9 bits (167), Expect = 5e-12 Identities = 32/46 (69%), Positives = 38/46 (82%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK+RL EQV LE+SFE NKLEPERK +LA+ LGLQPRQ+A+WF Sbjct: 115 KKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWF 160
>ATHB7_ARATH (P46897) Homeobox-leucine zipper protein ATHB-7 (Homeodomain| transcription factor ATHB-7) (HD-ZIP protein ATHB-7) Length = 258 Score = 62.0 bits (149), Expect = 6e-10 Identities = 27/45 (60%), Positives = 35/45 (77%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +RR + EQ+ LE FE E +LEP +K +LAR+LGLQPRQVA+WF Sbjct: 33 QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWF 77
>HAT9_ARATH (P46603) Homeobox-leucine zipper protein HAT9 (Homeodomain-leucine| zipper protein HAT9) (Homeodomain transcription factor HAT9) (HD-ZIP protein 9) Length = 274 Score = 54.3 bits (129), Expect = 1e-07 Identities = 26/46 (56%), Positives = 34/46 (73%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK RLT +Q LLE SF++ + L P++K LAR+L L+PRQV VWF Sbjct: 113 KKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWF 158
>HAT1_ARATH (P46600) Homeobox-leucine zipper protein HAT1 (HD-ZIP protein 1)| Length = 282 Score = 52.0 bits (123), Expect = 6e-07 Identities = 25/46 (54%), Positives = 33/46 (71%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK RL+ +Q +LE +F+E N L P++K LA+KLGL RQV VWF Sbjct: 135 KKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWF 180
>HAT14_ARATH (P46665) Homeobox-leucine zipper protein HAT14 (HD-ZIP protein 14)| Length = 336 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/46 (52%), Positives = 33/46 (71%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK RL+ +Q LE SF+E + L P++K LA++L L+PRQV VWF Sbjct: 190 KKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWF 235
>HAT22_ARATH (P46604) Homeobox-leucine zipper protein HAT22 (HD-ZIP protein 22)| Length = 278 Score = 50.8 bits (120), Expect = 1e-06 Identities = 25/46 (54%), Positives = 33/46 (71%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK RLT +Q LLE +F+ + L P++K LAR+L L+PRQV VWF Sbjct: 126 KKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWF 171
>HAT2_ARATH (P46601) Homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2)| Length = 283 Score = 50.1 bits (118), Expect = 2e-06 Identities = 24/46 (52%), Positives = 31/46 (67%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK RL+ +Q LE +F+E N L P++K LA+KL L RQV VWF Sbjct: 130 KKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWF 175
>HAT4_ARATH (Q05466) Homeobox-leucine zipper protein HAT4 (HD-ZIP protein 4)| (HD-ZIP protein ATHB-2) Length = 284 Score = 49.3 bits (116), Expect = 4e-06 Identities = 22/46 (47%), Positives = 34/46 (73%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK RL+ +Q +LE +F++ + L P++K LA++LGL+ RQV VWF Sbjct: 129 KKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWF 174
>HAT3_ARATH (P46602) Homeobox-leucine zipper protein HAT3 (HD-ZIP protein 3)| Length = 315 Score = 49.3 bits (116), Expect = 4e-06 Identities = 23/46 (50%), Positives = 33/46 (71%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK RL+ EQ +LE +F+E + L P++K LA++L L+ RQV VWF Sbjct: 162 KKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWF 207
>ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein| ATHB-4) Length = 318 Score = 48.1 bits (113), Expect = 9e-06 Identities = 22/46 (47%), Positives = 33/46 (71%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK RL+ +Q +LE +F+E + L P++K LA++L L+ RQV VWF Sbjct: 163 KKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWF 208
>Y749_MIMIV (Q5UP03) Putative homeobox protein R749| Length = 224 Score = 45.8 bits (107), Expect = 4e-05 Identities = 20/46 (43%), Positives = 31/46 (67%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ RL+ E+ ++LE + + N PE + ELA+K+G PRQV +WF Sbjct: 164 KRVRLSDEERNILESQYSKNNFPSPEIRDELAKKIGKTPRQVQIWF 209
>HMEN_ARTSF (Q05640) Homeobox protein engrailed| Length = 349 Score = 39.3 bits (90), Expect = 0.004 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ L+ F E L R+ +LAR+LGL Q+ +WF Sbjct: 257 TAEQLSRLKHEFNENRYLTERRRQDLARELGLHENQIKIWF 297
>BARH2_DROME (Q24256) Homeobox protein B-H2 (Homeobox protein BarH2)| Length = 645 Score = 39.3 bits (90), Expect = 0.004 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 7/116 (6%) Frame = +1 Query: 100 NTSGSGNGQMLFMDCGAGAAG----MFHRGVRPVLGGMEE-GRGVKRPFFTSXXXXXXXX 264 N +GSGNG ML G+ +G GG ++ G + ++ Sbjct: 313 NNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHL 372 Query: 265 XXXXXXXXKKRR--LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +K R T Q+ LE+SFE + L + + ELA KL L QV W+ Sbjct: 373 SLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWY 428
>MEOX2_MOUSE (P32443) Homeobox protein MOX-2 (Mesenchyme homeobox 2)| Length = 303 Score = 38.5 bits (88), Expect = 0.007 Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 1/116 (0%) Frame = +1 Query: 82 PGRLIFNTSGSGNGQMLFMDCGAGAAGMFHRGVRPVLGGMEEGRGVKRPFFTSXXXXXXX 261 P L N+S G+ C G G + + P +E+ G KR +S Sbjct: 123 PPVLCSNSSSLGSSTPTGAACAPGDYG--RQALSPA--DVEKRSGSKRKSDSSDSQEGNY 178 Query: 262 XXXXXXXXXKKRR-LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+R T EQ+ LE F N L R+ E+A L L RQV VWF Sbjct: 179 KSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWF 234
>HGL2_ARATH (P46607) Homeobox protein GLABRA2 (Homeobox-leucine zipper protein| ATHB-10) (HD-ZIP protein ATHB-10) Length = 745 Score = 38.5 bits (88), Expect = 0.007 Identities = 17/46 (36%), Positives = 29/46 (63%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K R T +Q+ +E F+E + +++ +L+++LGL PRQV WF Sbjct: 102 KYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWF 147
>HD10_ENCCU (Q8SW18) Homeobox protein HD-10 (EcHD-10)| Length = 227 Score = 38.1 bits (87), Expect = 0.009 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 ++R T Q+ +LE +FE + + + +L +LG+ PR V VWF Sbjct: 34 RKRTTKAQLKVLEETFETNIRPDANMRKKLGEQLGMTPRSVQVWF 78
>MEOX2_XENLA (P39021) Homeobox protein MOX-2| Length = 298 Score = 38.1 bits (87), Expect = 0.009 Identities = 38/117 (32%), Positives = 43/117 (36%), Gaps = 2/117 (1%) Frame = +1 Query: 82 PGRLIFNTSGSGNGQMLFMDCGAGAAGMFHRGVRPVLGGME-EGRGVKRPFFTSXXXXXX 258 P L NTS G C G G R L E E R KR +S Sbjct: 119 PSILCSNTSSLGTNNSTGAACVTGDYG------RQSLSPAEAEKRTGKRKSDSSDSQEGS 172 Query: 259 XXXXXXXXXXKKRR-LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+R T EQ+ LE F N L R+ E+A L L RQV VWF Sbjct: 173 YKSDVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWF 229
>HMH2_DUGTI (Q00401) Homeobox protein DTH-2| Length = 363 Score = 38.1 bits (87), Expect = 0.009 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 2/121 (1%) Frame = +1 Query: 70 PAMEPGRLIFNTSGSGNGQMLFMDCGAGAAGMFHRGVRPVLGGMEEGRGVKRPFFTSXXX 249 P M RL+ + + + + M +G FH+G+ +G G + Sbjct: 71 PRMTMSRLMGSAAAAASSSM---SAYSGIPTNFHQGMHSAMGMASLGAA-------TYDH 120 Query: 250 XXXXXXXXXXXXXKKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVW 423 +KRR+ + Q++ LER F+++ L + LA + L P QV +W Sbjct: 121 QKAAMQFNNMSQRRKRRILFSQAQIYELERRFKQQKYLSAPEREHLANLINLTPTQVKIW 180 Query: 424 F 426 F Sbjct: 181 F 181
>YD73_SCHPO (Q10328) Putative homeobox protein C32A11.03c in chromosome I| Length = 942 Score = 37.7 bits (86), Expect = 0.012 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK+RLT +Q+ L R F ++ P + ++ R+L + R V +WF Sbjct: 169 KKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWF 214
>HMEN_SCHAM (P14150) Segmentation polarity homeobox protein engrailed (G-EN)| (Fragment) Length = 93 Score = 37.7 bits (86), Expect = 0.012 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 EQ+ L+ F E L R+ ELAR+LGL Q+ +WF Sbjct: 44 EQLARLKHEFTENRYLTERRRQELARELGLNEAQIKIWF 82
>LOX10_HELTR (P42584) Homeobox protein LOX10 (Fragment)| Length = 184 Score = 37.4 bits (85), Expect = 0.015 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + Q++ LER F ++ L + LA +GL P QV +WF Sbjct: 77 RKRRILFSQAQIYELERRFRQQKYLSAPEREHLATFIGLTPTQVKIWF 124
>MEOX2_HUMAN (P50222) Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth| arrest-specific homeobox) Length = 304 Score = 37.0 bits (84), Expect = 0.020 Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 1/116 (0%) Frame = +1 Query: 82 PGRLIFNTSGSGNGQMLFMDCGAGAAGMFHRGVRPVLGGMEEGRGVKRPFFTSXXXXXXX 261 P L N+S G+ C G G + + P E+ G KR +S Sbjct: 124 PPVLCSNSSSLGSSTPTGAACAPGDYG--RQALSPAEA--EKRSGGKRKSDSSDSQEGNY 179 Query: 262 XXXXXXXXXKKRR-LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+R T EQ+ LE F N L R+ E+A L L RQV VWF Sbjct: 180 KSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWF 235
>MATA1_PICAN (Q707Y6) Mating-type protein A1 (MATa1 transcription factor)| Length = 181 Score = 37.0 bits (84), Expect = 0.020 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +1 Query: 289 KKRRLTPEQV-HLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KKRR PE LLE++F+ + + + +AR+ G+ P QV VWF Sbjct: 124 KKRRHIPESSKELLEKAFKVKRFPNSKERERIARECGISPLQVRVWF 170
>HM16_CAEEL (P34326) Homeobox protein engrailed-like ceh-16| Length = 187 Score = 36.6 bits (83), Expect = 0.026 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +Q+ L+ F E L +R+ ELA +LGL Q+ +WF Sbjct: 95 TGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKIWF 135
>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)| Length = 544 Score = 36.6 bits (83), Expect = 0.026 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ LE+SFE + L + + ELA KL L QV W+ Sbjct: 307 TDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWY 347
>VAX2_RAT (Q9JLZ9) Ventral anterior homeobox 2| Length = 292 Score = 36.6 bits (83), Expect = 0.026 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ++ LE F+ + +TELAR+L L QV VWF Sbjct: 110 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWF 150
>VAX2_MOUSE (Q9WTP9) Ventral anterior homeobox 2 (Ventral retina homeodomain| protein) Length = 292 Score = 36.6 bits (83), Expect = 0.026 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ++ LE F+ + +TELAR+L L QV VWF Sbjct: 110 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWF 150
>VAX2_HUMAN (Q9UIW0) Ventral anterior homeobox 2| Length = 290 Score = 36.6 bits (83), Expect = 0.026 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ++ LE F+ + +TELAR+L L QV VWF Sbjct: 110 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWF 150
>HME60_APIME (P09075) Homeobox protein E60 (Fragment)| Length = 109 Score = 36.6 bits (83), Expect = 0.026 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 EQ+ L+R F E L R+ +L+R LGL Q+ +WF Sbjct: 30 EQLARLKREFAENRYLTERRRQQLSRDLGLNEAQIKIWF 68
>HHEX_CHICK (Q05502) Homeobox protein PRH (Hematopoietically expressed| homeobox) Length = 277 Score = 36.6 bits (83), Expect = 0.026 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +1 Query: 298 RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 R + EQ LE+ FE + L P + LA+ L L RQV WF Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWF 192
>DTH1_DUGTI (Q00400) Homeobox protein DTH-1| Length = 533 Score = 36.6 bits (83), Expect = 0.026 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + +Q+ LER F ++ L + LA +GL P QV +WF Sbjct: 378 RKRRVLFSKKQILELERHFRQKKYLSAPEREHLANLIGLSPTQVKIWF 425
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 36.6 bits (83), Expect = 0.026 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ LE+SFE + L + + ELA KL L QV W+ Sbjct: 339 TDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWY 379
>OTP_MOUSE (O09113) Homeobox protein orthopedia| Length = 325 Score = 36.6 bits (83), Expect = 0.026 Identities = 18/45 (40%), Positives = 28/45 (62%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 + R TP Q++ LERSF + + + + ELA ++GL +V VWF Sbjct: 108 RTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWF 152
>HM05_CAEEL (P20269) Homeobox protein ceh-5| Length = 148 Score = 36.6 bits (83), Expect = 0.026 Identities = 18/41 (43%), Positives = 21/41 (51%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ LE SF L + +LA LGL QV VWF Sbjct: 43 TDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWF 83
>HME1A_BRARE (Q04896) Homeobox protein engrailed-1a (Eng1)| Length = 231 Score = 36.2 bits (82), Expect = 0.034 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ L+ F+ + +R+ LAR+LGL Q+ +WF Sbjct: 151 TAEQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWF 191
>HME2B_BRARE (P31533) Homeobox protein engrailed-2b (Zf-En-1) (Eng3)| Length = 261 Score = 36.2 bits (82), Expect = 0.034 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ L+ F+ L +R+ LA++LGL Q+ +WF Sbjct: 180 TAEQLQRLKNEFQNNRYLTEQRRQALAQELGLNESQIKIWF 220
>HME30_APIME (P09076) Homeobox protein E30 (Fragment)| Length = 109 Score = 36.2 bits (82), Expect = 0.034 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 EQ+ L+R F E L R+ +L+R LGL Q+ +WF Sbjct: 30 EQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWF 68
>HMEN_HELTR (P23397) Homeobox protein Ht-En (Fragment)| Length = 98 Score = 36.2 bits (82), Expect = 0.034 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +Q+ L+R F E L +R+T LA++L L Q+ +WF Sbjct: 11 TGDQLARLKREFSENKYLTEQRRTCLAKELNLNESQIKIWF 51
>MEOX2_RAT (P39020) Homeobox protein MOX-2 (Growth arrest-specific homeobox)| Length = 303 Score = 36.2 bits (82), Expect = 0.034 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 ++ T EQ+ LE F N L R+ E+A L L RQV VWF Sbjct: 189 ERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWF 234
>MEOX1_MOUSE (P32442) Homeobox protein MOX-1 (Mesenchyme homeobox 1)| Length = 253 Score = 35.8 bits (81), Expect = 0.044 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 ++ T EQ+ LE F N L R+ E+A L L RQV VWF Sbjct: 173 ERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWF 218
>HHEX_MOUSE (P43120) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 271 Score = 35.8 bits (81), Expect = 0.044 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +1 Query: 298 RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 R + +Q LE+ FE + L P + LA+ L L RQV WF Sbjct: 144 RFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWF 186
>HHEX_HUMAN (Q03014) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 270 Score = 35.8 bits (81), Expect = 0.044 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +1 Query: 298 RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 R + +Q LE+ FE + L P + LA+ L L RQV WF Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWF 185
>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)| Length = 288 Score = 35.8 bits (81), Expect = 0.044 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ L+ F+ L +R+ LA++LGL Q+ +WF Sbjct: 207 TAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWF 247
>HME2B_XENLA (P52730) Homeobox protein engrailed-2-B (En-2B) (EN2 MABEN)| Length = 265 Score = 35.8 bits (81), Expect = 0.044 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ L+ F+ L +R+ LA++LGL Q+ +WF Sbjct: 184 TAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWF 224
>HME2A_BRARE (P09015) Homeobox protein engrailed-2a (Zf-En-2) (Eng2)| Length = 265 Score = 35.8 bits (81), Expect = 0.044 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ L+ F+ L +R+ LA++LGL Q+ +WF Sbjct: 184 TAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWF 224
>MEOX1_HUMAN (P50221) Homeobox protein MOX-1 (Mesenchyme homeobox 1)| Length = 254 Score = 35.8 bits (81), Expect = 0.044 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 ++ T EQ+ LE F N L R+ E+A L L RQV VWF Sbjct: 174 ERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWF 219
>TITF1_RAT (P23441) Thyroid transcription factor 1 (Thyroid nuclear factor 1)| (TTF-1) (Homeobox protein Nkx-2.1) Length = 372 Score = 35.4 bits (80), Expect = 0.058 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + QV+ LER F+++ L + LA + L P QV +WF Sbjct: 162 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWF 209
>TITF1_MOUSE (P50220) Thyroid transcription factor 1 (Thyroid nuclear factor 1)| (TTF-1) (Homeobox protein Nkx-2.1) Length = 372 Score = 35.4 bits (80), Expect = 0.058 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + QV+ LER F+++ L + LA + L P QV +WF Sbjct: 162 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWF 209
>SHOX_HUMAN (O15266) Short stature homeobox protein (Short stature| homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein) Length = 292 Score = 35.4 bits (80), Expect = 0.058 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 + T EQ++ LER F+E + + + EL+++LGL +V VWF Sbjct: 121 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWF 165
>NKX24_MOUSE (Q9EQM3) Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4)| (Homeobox protein NK-2 homolog D) Length = 354 Score = 35.4 bits (80), Expect = 0.058 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + QV+ LER F+++ L + LA + L P QV +WF Sbjct: 189 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWF 236
>HM24_CAEBR (O17319) Homeobox protein ceh-24| Length = 297 Score = 35.4 bits (80), Expect = 0.058 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + QV+ LER F++ L + +LA + L P QV +WF Sbjct: 146 RKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWF 193
>HM24_CAEEL (Q9NLC2) Homeobox protein ceh-24| Length = 299 Score = 35.4 bits (80), Expect = 0.058 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + QV+ LER F++ L + +LA + L P QV +WF Sbjct: 151 RKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWF 198
>NKX24_HUMAN (Q9H2Z4) Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4)| (Homeobox protein NK-2 homolog D) Length = 353 Score = 35.4 bits (80), Expect = 0.058 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + QV+ LER F+++ L + LA + L P QV +WF Sbjct: 190 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWF 237
>SHOX2_RAT (O35750) Short stature homeobox protein 2 (Paired family| homeodomain protein Prx3) (Fragment) Length = 237 Score = 35.4 bits (80), Expect = 0.058 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 + T EQ++ LER F+E + + + EL+++LGL +V VWF Sbjct: 50 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWF 94
>SHOX2_MOUSE (P70390) Short stature homeobox protein 2 (Homeobox protein Og12X)| (OG-12) (Paired family homeodomain protein Prx3) Length = 331 Score = 35.4 bits (80), Expect = 0.058 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 + T EQ++ LER F+E + + + EL+++LGL +V VWF Sbjct: 144 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWF 188
>SHOX2_HUMAN (O60902) Short stature homeobox protein 2 (Paired-related homeobox| protein SHOT) (Homeobox protein Og12X) Length = 331 Score = 35.4 bits (80), Expect = 0.058 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 + T EQ++ LER F+E + + + EL+++LGL +V VWF Sbjct: 144 RTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWF 188
>HMEN_DROME (P02836) Segmentation polarity homeobox protein engrailed| Length = 552 Score = 35.4 bits (80), Expect = 0.058 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 EQ+ L+R F E L R+ +L+ +LGL Q+ +WF Sbjct: 464 EQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWF 502
>TITF1_HUMAN (P43699) Thyroid transcription factor 1 (Thyroid nuclear factor 1)| (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A) Length = 371 Score = 35.4 bits (80), Expect = 0.058 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + QV+ LER F+++ L + LA + L P QV +WF Sbjct: 162 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWF 209
>TITF1_CANFA (P43698) Thyroid transcription factor 1 (Thyroid nuclear factor 1)| (TTF-1) (Homeobox protein Nkx-2.1) Length = 371 Score = 35.4 bits (80), Expect = 0.058 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + QV+ LER F+++ L + LA + L P QV +WF Sbjct: 162 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWF 209
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 35.4 bits (80), Expect = 0.058 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 EQ+ L+R F E L R+ +L+ +LGL Q+ +WF Sbjct: 496 EQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWF 534
>LBX1_MOUSE (P52955) Transcription factor LBX1| Length = 280 Score = 35.0 bits (79), Expect = 0.075 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%) Frame = +1 Query: 289 KKRR-----LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KKRR T Q++ LE+ F + L P + ++A++LGL QV WF Sbjct: 122 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWF 172
>LBX1_HUMAN (P52954) Transcription factor LBX1| Length = 280 Score = 35.0 bits (79), Expect = 0.075 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%) Frame = +1 Query: 289 KKRR-----LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KKRR T Q++ LE+ F + L P + ++A++LGL QV WF Sbjct: 122 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWF 172
>HM09_CAEEL (P56407) Homeobox protein ceh-9| Length = 147 Score = 35.0 bits (79), Expect = 0.075 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRLT--PEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KK R T +QV LE+ FE + L ++ELA++L + QV +WF Sbjct: 71 KKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWF 118
>NKX28_MOUSE (O70584) Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H)| (Homeobox protein Nkx-2.9) Length = 235 Score = 35.0 bits (79), Expect = 0.075 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + Q LER F ++ L + +LAR L L P QV +WF Sbjct: 82 RKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWF 129
>HXA11_CHICK (P31258) Homeobox protein Hox-A11 (Ghox-1I) (Chox-1.9)| Length = 297 Score = 35.0 bits (79), Expect = 0.075 Identities = 29/95 (30%), Positives = 37/95 (38%), Gaps = 1/95 (1%) Frame = +1 Query: 145 GAGAAGMFHRGVRPVLGGMEEGRGVKRPFFTSXXXXXXXXXXXXXXXXKKR-RLTPEQVH 321 GA AA R RP G E +S KKR T Q+ Sbjct: 187 GAAAAAGKERRRRPESGSSPES--------SSGNNEEKSGSSSGQRTRKKRCPYTKYQIR 238 Query: 322 LLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LER F + E++ +L+R L L RQV +WF Sbjct: 239 ELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 273
>CDX1_HUMAN (P47902) Homeobox protein CDX-1 (Caudal-type homeobox protein 1)| Length = 265 Score = 35.0 bits (79), Expect = 0.075 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + RK+ELA LGL RQV +WF Sbjct: 169 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWF 202
>OTP_PARLI (O76971) Homeobox protein orthopedia-related (PLOTP)| Length = 364 Score = 35.0 bits (79), Expect = 0.075 Identities = 24/94 (25%), Positives = 38/94 (40%) Frame = +1 Query: 145 GAGAAGMFHRGVRPVLGGMEEGRGVKRPFFTSXXXXXXXXXXXXXXXXKKRRLTPEQVHL 324 G G GM G +G G +P + R TP Q++ Sbjct: 86 GGGGGGMVGDGTGHSVGSSGSGNDDDKP---------------AKQKRHRTRFTPAQLNE 130 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LER+F + + + + E+A ++GL +V VWF Sbjct: 131 LERNFAKTHYPDIFMREEIAMRVGLTESRVQVWF 164
>NKX25_RAT (O35767) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)| (rNKx-2.5) Length = 318 Score = 35.0 bits (79), Expect = 0.075 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 QV+ LER F+++ L P + +LA L L QV +WF Sbjct: 148 QVYELERRFKQQRYLSPAERDQLASVLKLTSTQVKIWF 185
>CDX1_MOUSE (P18111) Homeobox protein CDX-1 (Caudal-type homeobox protein 1)| Length = 268 Score = 35.0 bits (79), Expect = 0.075 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + RK+ELA LGL RQV +WF Sbjct: 169 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWF 202
>CDX1_RAT (Q05095) Homeobox protein CDX-1 (Caudal-type homeobox protein 1)| (Fragment) Length = 123 Score = 35.0 bits (79), Expect = 0.075 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + RK+ELA LGL RQV +WF Sbjct: 20 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWF 53
>EVX1_HUMAN (P49640) Homeobox even-skipped homolog protein 1 (EVX-1)| Length = 407 Score = 34.7 bits (78), Expect = 0.098 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ LE+ F EN + R+ ELA L L + VWF Sbjct: 191 TREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWF 231
>ZHX1_HUMAN (Q9UKY1) Zinc fingers and homeoboxes protein 1| Length = 873 Score = 34.7 bits (78), Expect = 0.098 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 TPEQ+H+L+ +F PE +LA++ GL + WF Sbjct: 668 TPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWF 708
>EVX1_MOUSE (P23683) Homeobox even-skipped homolog protein 1 (EVX-1)| Length = 416 Score = 34.7 bits (78), Expect = 0.098 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ LE+ F EN + R+ ELA L L + VWF Sbjct: 191 TREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWF 231
>CDX4_HUMAN (O14627) Homeobox protein CDX-4 (Caudal-type homeobox protein 4)| Length = 284 Score = 34.7 bits (78), Expect = 0.098 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + +RK+ELA LGL RQV +WF Sbjct: 188 LEKEFHCNRYITIQRKSELAVNLGLSERQVKIWF 221
>CDX2_MOUSE (P43241) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| Length = 311 Score = 34.7 bits (78), Expect = 0.098 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + RK+ELA LGL RQV +WF Sbjct: 200 LEKEFHFSRYITIRRKSELAATLGLSERQVKIWF 233
>CDX2_MESAU (Q04649) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| Length = 313 Score = 34.7 bits (78), Expect = 0.098 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + RK ELA LGL RQV +WF Sbjct: 200 LEKEFHYSRYITIRRKAELAATLGLSERQVKIWF 233
>CDX2_HUMAN (Q99626) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| (CDX-3) Length = 313 Score = 34.7 bits (78), Expect = 0.098 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + RK ELA LGL RQV +WF Sbjct: 201 LEKEFHYSRYITIRRKAELAATLGLSERQVKIWF 234
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 34.7 bits (78), Expect = 0.098 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ T Q + LER F ++ L + LA + L P QV +WF Sbjct: 546 RKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWF 593
>EVX2_HUMAN (Q03828) Homeobox even-skipped homolog protein 2 (EVX-2)| Length = 476 Score = 34.7 bits (78), Expect = 0.098 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ LE+ F EN + R+ ELA L L + VWF Sbjct: 196 TREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWF 236
>EVX2_HETFR (Q9IA18) Homeobox even-skipped homolog protein 2 (EVX-2)| Length = 424 Score = 34.7 bits (78), Expect = 0.098 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ LE+ F EN + R+ ELA L L + VWF Sbjct: 187 TREQIGRLEKEFYRENYVSRPRRCELAAALNLPETTIKVWF 227
>OTP_DROME (P56672) Homeobox protein orthopedia| Length = 264 Score = 34.7 bits (78), Expect = 0.098 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 + R TP Q++ LER F + + + + E+A ++GL +V VWF Sbjct: 10 RTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWF 54
>HOX3_XENLA (P50476) Homeobox protein XHOX-3| Length = 388 Score = 34.7 bits (78), Expect = 0.098 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ LE+ F EN + R+ ELA L L + VWF Sbjct: 176 TREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWF 216
>HM22_CAEEL (P41936) Homeobox protein ceh-22| Length = 346 Score = 34.7 bits (78), Expect = 0.098 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ T Q + LER F + L + LA ++ L P QV +WF Sbjct: 190 RKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWF 237
>EVX2_MOUSE (P49749) Homeobox even-skipped homolog protein 2 (EVX-2)| Length = 475 Score = 34.7 bits (78), Expect = 0.098 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T EQ+ LE+ F EN + R+ ELA L L + VWF Sbjct: 199 TREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWF 239
>HXD11_HUMAN (P31277) Homeobox protein Hox-D11 (Hox-4F)| Length = 338 Score = 34.3 bits (77), Expect = 0.13 Identities = 28/107 (26%), Positives = 39/107 (36%) Frame = +1 Query: 106 SGSGNGQMLFMDCGAGAAGMFHRGVRPVLGGMEEGRGVKRPFFTSXXXXXXXXXXXXXXX 285 +G G G C G +G GG EG P + Sbjct: 217 AGGGGGS----PCTKATPGSEPKGAAEGSGGDGEG-----PPGEAGAEKSSSAVAPQRSR 267 Query: 286 XKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 268 KKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 314
>HMB3_TRIGR (P10178) Homeobox protein HB3 (Fragment)| Length = 108 Score = 34.3 bits (77), Expect = 0.13 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 ++ T +Q LE+ F + R+ E+A+ LGL RQ+ +WF Sbjct: 31 RQTYTRQQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWF 75
>BARH1_RAT (P63156) BarH-like 1 homeobox protein (Bar-class homeodomain| protein MBH2) (BarH-related homeobox protein 1) Length = 327 Score = 34.3 bits (77), Expect = 0.13 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ LERSFE + L + + ELA L L QV W+ Sbjct: 186 TDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWY 226
>BARH1_MOUSE (P63157) BarH-like 1 homeobox protein (Bar-class homeodomain| protein MBH2) (BarH-related homeobox protein 1) Length = 327 Score = 34.3 bits (77), Expect = 0.13 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ LERSFE + L + + ELA L L QV W+ Sbjct: 186 TDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWY 226
>BARH1_HUMAN (Q9BZE3) BarH-like 1 homeobox protein| Length = 327 Score = 34.3 bits (77), Expect = 0.13 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ LERSFE + L + + ELA L L QV W+ Sbjct: 186 TDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWY 226
>YL15_CAEEL (Q11101) Hypothetical homeobox protein C02F12.5 in chromosome X| Length = 252 Score = 34.3 bits (77), Expect = 0.13 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T EQV LLE F + + +R+ ELA+ + L QV WF Sbjct: 44 KRTTFTSEQVTLLELEFAKNEYICKDRRGELAQTIELTECQVKTWF 89
>RX_DUGJA (O97039) Retinal homeobox protein Rax (DjRax) (Fragment)| Length = 268 Score = 34.3 bits (77), Expect = 0.13 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 95 TTYQLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWF 135
>HMD1_CHICK (P46692) Homeobox protein CHOX-CAD| Length = 248 Score = 34.3 bits (77), Expect = 0.13 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + RK ELA LGL RQV +WF Sbjct: 152 LEKEFHYSRYITIRRKAELAAALGLTERQVKIWF 185
>HMEN_LAMPL (P31534) Homeobox protein engrailed-like (EN) (Fragment)| Length = 60 Score = 34.3 bits (77), Expect = 0.13 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 EQ+ L F+ L ER+T LAR+L L Q+ +WF Sbjct: 2 EQLCRLRAEFQASRYLTEERRTALARELRLNEAQIKIWF 40
>HXD11_CHICK (P24342) Homeobox protein Hox-D11 (Chox-4.6) (GHOX-4.6) (Chox-4E)| Length = 280 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 211 KRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 256
>VAB7_CAEEL (Q93899) Homeobox protein vab-7| Length = 247 Score = 33.9 bits (76), Expect = 0.17 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 EQ+ LER F +EN + + + ELA +L L + VWF Sbjct: 78 EQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKVWF 116
>RX1_CHICK (Q9PVY0) Retinal homeobox protein Rx1 (cRax1)| Length = 228 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 44 TTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 84
>NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1| Length = 367 Score = 33.9 bits (76), Expect = 0.17 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +Q+ LE++FE+ L + LA LG+ QV VWF Sbjct: 246 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
>TITF1_CAVPO (P97273) Thyroid transcription factor 1 (Thyroid nuclear factor 1)| (TTF-1) (Homeobox protein Nkx-2.1) (Fragment) Length = 112 Score = 33.9 bits (76), Expect = 0.17 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 QV+ LER F+++ L + LA + L P QV +WF Sbjct: 12 QVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWF 49
>RX2_CHICK (Q9PVX0) Retinal homeobox protein Rx2 (cRax2)| Length = 317 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 130 TTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 170
>ZHX1_RAT (Q8R515) Zinc fingers and homeoboxes protein 1| Length = 873 Score = 33.9 bits (76), Expect = 0.17 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 TPEQ+H+L+ +F PE +LA + GL + WF Sbjct: 668 TPEQLHMLKSAFVRTQWPSPEEYDKLAEESGLARTDIVSWF 708
>RX_DROME (Q9W2Q1) Retinal homeobox protein Rx (DRx1) (DRx)| Length = 873 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 536 TTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 576
>RX2_ORYLA (Q9I9A2) Retinal homeobox protein Rx2| Length = 327 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 145 TTYQLHELERAFEKSHYPDVYSREELATKVNLPEVRVQVWF 185
>RX2_BRARE (O42357) Retinal homeobox protein Rx2| Length = 327 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 143 TTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 183
>HXD11_NOTVI (P31263) Homeobox protein Hox-D11 (NvHox-2)| Length = 277 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 208 KRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 253
>GSC_MOUSE (Q02591) Homeobox protein goosecoid| Length = 256 Score = 33.9 bits (76), Expect = 0.17 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = +1 Query: 289 KKRR----LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR T EQ+ LE F+E + + +LARK+ L+ +V VWF Sbjct: 159 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWF 208
>EVE_DROME (P06602) Segmentation protein even-skipped| Length = 376 Score = 33.9 bits (76), Expect = 0.17 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +Q+ LE+ F +EN + R+ ELA +L L + VWF Sbjct: 78 TRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWF 118
>RXA_XENLA (O42201) Retinal homeobox protein Rx-A (xRx1)| Length = 322 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 138 TTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 178
>RX1_ASTFA (Q9I9D5) Retinal homeobox protein Rx1| Length = 334 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 150 TTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 190
>RXB_XENLA (O42567) Retinal homeobox protein Rx-B (Rx2A)| Length = 325 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 138 TTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 178
>HXD11_MOUSE (P23813) Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5)| Length = 323 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 254 KRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 299
>HXA9A_BRARE (Q9PWL6) Homeobox protein Hox-A9a (Hoxx9)| Length = 250 Score = 33.9 bits (76), Expect = 0.17 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LE+ F L +R+ E+AR L L RQV +WF Sbjct: 187 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWF 232
>HXA11_MOUSE (P31311) Homeobox protein Hox-A11 (Hox-1.9)| Length = 313 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 244 KRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 289
>HXA11_HUMAN (P31270) Homeobox protein Hox-A11 (Hox-1I)| Length = 313 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 244 KRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 289
>HXB4_CHICK (P14840) Homeobox protein Hox-B4 (Chox-Z)| Length = 245 Score = 33.9 bits (76), Expect = 0.17 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 158 TRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWF 198
>HM30_CAEEL (Q22909) Homeobox protein ceh-30| Length = 299 Score = 33.9 bits (76), Expect = 0.17 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +Q+ LE +FE++ L + + +LA ++GL QV W+ Sbjct: 165 TDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWY 205
>GSC_HUMAN (P56915) Homeobox protein goosecoid| Length = 257 Score = 33.9 bits (76), Expect = 0.17 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = +1 Query: 289 KKRR----LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR T EQ+ LE F+E + + +LARK+ L+ +V VWF Sbjct: 159 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWF 208
>GSC_CHICK (P53545) Homeobox protein goosecoid| Length = 245 Score = 33.9 bits (76), Expect = 0.17 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = +1 Query: 289 KKRR----LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR T EQ+ LE F+E + + +LARK+ L+ +V VWF Sbjct: 149 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWF 198
>NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1| Length = 364 Score = 33.9 bits (76), Expect = 0.17 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +Q+ LE++FE+ L + LA LG+ QV VWF Sbjct: 246 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 284
>HXD11_HETFR (Q9IA15) Homeobox protein Hox-D11| Length = 265 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 196 KRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 241
>HM13_CAEEL (P17488) Homeobox protein ceh-13| Length = 202 Score = 33.9 bits (76), Expect = 0.17 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 + T Q+ LE+ F + R+TE+A L LQ QV +WF Sbjct: 118 RTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWF 162
>CDX4_MOUSE (Q07424) Homeobox protein CDX-4 (Caudal-type homeobox protein 4)| Length = 282 Score = 33.9 bits (76), Expect = 0.17 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + RK+ELA LGL RQV +WF Sbjct: 186 LEKEFHCNRYITIRRKSELAVNLGLSERQVKIWF 219
>RX1_BRARE (O42356) Retinal homeobox protein Rx1| Length = 330 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 145 TTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 185
>NKX28_HUMAN (O15522) Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H)| Length = 239 Score = 33.9 bits (76), Expect = 0.17 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 KKRR+ + Q LER F ++ L + +LA L L P QV +WF Sbjct: 85 KKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWF 132
>GSC_BRARE (P53544) Homeobox protein goosecoid (ZGSC)| Length = 240 Score = 33.9 bits (76), Expect = 0.17 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = +1 Query: 289 KKRR----LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR T EQ+ LE F+E + + +LARK+ L+ +V VWF Sbjct: 145 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWF 194
>NKX61_RAT (O35762) Homeobox protein Nkx-6.1| Length = 365 Score = 33.9 bits (76), Expect = 0.17 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +Q+ LE++FE+ L + LA LG+ QV VWF Sbjct: 247 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 285
>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1| Length = 365 Score = 33.9 bits (76), Expect = 0.17 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +Q+ LE++FE+ L + LA LG+ QV VWF Sbjct: 247 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 285
>HXB4_XENLA (P09070) Homeobox protein Hox-B4 (Xhox-1A)| Length = 232 Score = 33.9 bits (76), Expect = 0.17 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 149 TRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWF 189
>HXABB_DANAE (Q9DDU2) Homeobox protein Hox-A11b| Length = 283 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 214 KRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 259
>HXABB_BRARE (Q9DDU1) Homeobox protein Hox-A11b (Hox-A11)| Length = 283 Score = 33.9 bits (76), Expect = 0.17 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 214 KRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 259
>HXA9_MORSA (Q9PWD5) Homeobox protein Hox-A9| Length = 269 Score = 33.9 bits (76), Expect = 0.17 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LE+ F L +R+ E+AR L L RQV +WF Sbjct: 205 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWF 250
>HXA9_FUGRU (O42506) Homeobox protein Hox-A9 (HoxA-9)| Length = 283 Score = 33.9 bits (76), Expect = 0.17 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LE+ F L +R+ E+AR L L RQV +WF Sbjct: 219 KRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWF 264
>HXC4_MOUSE (Q08624) Homeobox protein Hox-C4 (Hox-3.5)| Length = 264 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 164 TRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWF 204
>HXC4_HUMAN (P09017) Homeobox protein Hox-C4 (Hox-3E) (CP19)| Length = 264 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 164 TRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWF 204
>HXB4_MOUSE (P10284) Homeobox protein Hox-B4 (Hox-2.6)| Length = 250 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 169 TRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWF 209
>EMX1_HUMAN (Q04741) Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty| spiracles-like protein 1) Length = 257 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +P Q+ LER+FE+ + + + +LA L L QV VWF Sbjct: 167 SPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWF 207
>RX_HUMAN (Q9Y2V3) Retinal homeobox protein Rx (Retina and anterior neural| fold homeobox protein) Length = 346 Score = 33.5 bits (75), Expect = 0.22 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 144 TTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWF 184
>HXC4A_BRARE (Q9PWM3) Homeobox protein Hox-C4a (Hox-C4)| Length = 268 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 162 TRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWF 202
>RX_RAT (Q9JLT7) Retinal homeobox protein Rx (Retina and anterior neural| fold homeobox protein) Length = 342 Score = 33.5 bits (75), Expect = 0.22 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 145 TTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWF 185
>RX_MOUSE (O35602) Retinal homeobox protein Rx (Retina and anterior neural| fold homeobox protein) Length = 342 Score = 33.5 bits (75), Expect = 0.22 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 144 TTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWF 184
>HXB4_HUMAN (P17483) Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6)| Length = 251 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 170 TRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWF 210
>HXB4_FUGRU (O13074) Homeobox protein Hox-B4 (HOXB-4)| Length = 251 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 171 TRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWF 211
>HXB4A_BRARE (P22574) Homeobox protein Hox-B4a (Hox-B4) (Zf-13)| Length = 246 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 159 TRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWF 199
>HM07_CAEEL (P20270) Homeobox protein ceh-7| Length = 84 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 ++ T EQ++LLE F + + + + LAR L L QV +WF Sbjct: 26 RRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKIWF 71
>EMX1_MOUSE (Q04742) Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty| spiracles-like protein 1) (Fragment) Length = 66 Score = 33.5 bits (75), Expect = 0.22 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +P Q+ LER+FE+ + + + +LA L L QV VWF Sbjct: 9 SPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWF 49
>HXA4_HETFR (Q9IA22) Homeobox protein Hox-A4| Length = 247 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQV +WF Sbjct: 157 TRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWF 197
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQV +WF Sbjct: 217 TRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWF 257
>RX3_BRARE (O42358) Retinal homeobox protein Rx3| Length = 292 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+H LER+FE+ + + + ELA K+ L +V VWF Sbjct: 114 TTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWF 154
>LIN39_CAEEL (P34684) Homeobox protein lin-39 (Abnormal cell lineage protein 39)| Length = 253 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T QV LE+ F L +R+ E+A L L RQV +WF Sbjct: 173 TRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWF 213
>DBX1_MOUSE (P52950) Homeobox protein DBX1| Length = 335 Score = 33.1 bits (74), Expect = 0.29 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE++F+++ + + +LA KLGL+ QV +WF Sbjct: 196 LEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWF 229
>HXA4_MOUSE (P06798) Homeobox protein Hox-A4 (Hox-1.4) (MH-3)| Length = 285 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQV +WF Sbjct: 188 TRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWF 228
>DLX4_ELECQ (P87394) Homeobox protein DLX-4 (Fragment)| Length = 131 Score = 33.1 bits (74), Expect = 0.29 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 QV L+R F++ L + ELA LGL QV +WF Sbjct: 93 QVAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 130
>HXA4_HUMAN (Q00056) Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4)| Length = 320 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQV +WF Sbjct: 223 TRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWF 263
>HNK2_XENLA (P42587) Homeobox protein XENK-2| Length = 196 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + Q + LER F ++ L + LA + L P QV +WF Sbjct: 70 RKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWF 117
>HXC4_ORYLA (Q9PVS4) Homeobox protein Hox-C4| Length = 261 Score = 33.1 bits (74), Expect = 0.29 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 162 TRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWF 202
>NKX22_MOUSE (P42586) Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B)| Length = 273 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + Q + LER F ++ L + LA + L P QV +WF Sbjct: 129 RKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWF 176
>NKX22_MESAU (P43697) Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B)| Length = 273 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + Q + LER F ++ L + LA + L P QV +WF Sbjct: 129 RKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWF 176
>NKX22_HUMAN (O95096) Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B)| Length = 273 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + Q + LER F ++ L + LA + L P QV +WF Sbjct: 129 RKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWF 176
>NX22A_BRARE (Q90481) Homeobox protein Nkx-2.2a (Homeobox protein NK-2 homolog| B) Length = 269 Score = 33.1 bits (74), Expect = 0.29 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRRL--TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR+ + Q + LER F ++ L + LA + L P QV +WF Sbjct: 126 RKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWF 173
>CDX_LINSA (P81193) Homeobox protein CDX (Caudal-type homeobox protein)| (LSCDX) (Fragment) Length = 70 Score = 33.1 bits (74), Expect = 0.29 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + RK ELA+ L L RQ+ +WF Sbjct: 16 LEKEFHYSRYITMNRKAELAKSLDLTERQIKIWF 49
>HXABA_BRARE (Q9DDU0) Homeobox protein Hox-A11a| Length = 284 Score = 32.7 bits (73), Expect = 0.37 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 215 KRCPYTKFQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKMWF 260
>HXD4_HUMAN (P09016) Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13)| Length = 255 Score = 32.7 bits (73), Expect = 0.37 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 162 TRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWF 202
>PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2| Length = 691 Score = 32.7 bits (73), Expect = 0.37 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRR--LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR TP+ + +L FE+ + TE+A KL V VWF Sbjct: 608 RKRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWF 655
>PO6F2_HUMAN (P78424) POU domain, class 6, transcription factor 2| (Retina-derived POU-domain factor 1) (RPF-1) Length = 684 Score = 32.7 bits (73), Expect = 0.37 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +1 Query: 289 KKRR--LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR TP+ + +L FE+ + TE+A KL V VWF Sbjct: 601 RKRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWF 648
>HXD4_CHICK (P17278) Homeobox protein Hox-D4 (Chox-A)| Length = 235 Score = 32.7 bits (73), Expect = 0.37 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 152 TRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWF 192
>HXC11_HUMAN (O43248) Homeobox protein Hox-C11| Length = 304 Score = 32.7 bits (73), Expect = 0.37 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 243 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 280
>HXD4_MOUSE (P10628) Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1)| Length = 250 Score = 32.7 bits (73), Expect = 0.37 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 160 TRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWF 200
>GSCB_XENLA (P53546) Homeobox protein goosecoid isoform B| Length = 243 Score = 32.7 bits (73), Expect = 0.37 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = +1 Query: 289 KKRR----LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR T EQ+ LE F+E + + +LAR++ L+ +V VWF Sbjct: 147 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWF 196
>GSCA_XENLA (P29454) Homeobox protein goosecoid isoform A| Length = 243 Score = 32.7 bits (73), Expect = 0.37 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = +1 Query: 289 KKRR----LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR T EQ+ LE F+E + + +LAR++ L+ +V VWF Sbjct: 147 RKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWF 196
>HXDBA_BRARE (Q90470) Homeobox protein Hox-D11a (Hox-D11) (Hox-C11)| Length = 263 Score = 32.7 bits (73), Expect = 0.37 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 202 QIRELEREFFFNVYINKEKRLQLSRMLSLTDRQVKIWF 239
>BAGP_DROME (P22809) Homeobox protein bagpipe (NK-3)| Length = 382 Score = 32.7 bits (73), Expect = 0.37 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 QV LER F ++ L ++E+A+ L L QV +WF Sbjct: 186 QVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWF 223
>SIX6_MOUSE (Q9QZ28) Homeobox protein SIX6 (Sine oculis homeobox homolog 6)| (Optic homeobox 2) (Six9 protein) Length = 246 Score = 32.7 bits (73), Expect = 0.37 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +1 Query: 319 HLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 HLL + ++ P +K ELA+ GL P QV WF Sbjct: 141 HLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWF 176
>SIX6_CHICK (O93307) Homeobox protein SIX6 (Sine oculis homeobox homolog 6)| (Optic homeobox 2) (Six9 protein) Length = 246 Score = 32.7 bits (73), Expect = 0.37 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +1 Query: 319 HLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 HLL + ++ P +K ELA+ GL P QV WF Sbjct: 141 HLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWF 176
>HXC12_MOUSE (P31313) Homeobox protein Hox-C12 (Hox-3.8) (Fragment)| Length = 60 Score = 32.7 bits (73), Expect = 0.37 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ LER F + E++ +L+R L L RQV +WF Sbjct: 12 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 49
>DLX3_AMBME (Q90229) Homeobox protein DLX-3| Length = 280 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA +LGL QV +WF Sbjct: 137 QLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 174
>BARH2_RAT (O88181) BarH-like 2 homeobox protein (Bar-class homeodomain| protein MBH1) (Homeobox protein B-H1) Length = 384 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q++ LERSFE + L + + +LA L L QV W+ Sbjct: 240 QLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWY 277
>BARH2_MOUSE (Q8VIB5) BarH-like 2 homeobox protein (Bar-class homeodomain| protein MBH1) (Homeobox protein B-H1) Length = 384 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q++ LERSFE + L + + +LA L L QV W+ Sbjct: 240 QLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWY 277
>DLX1_MOUSE (Q64317) Homeobox protein DLX-1| Length = 255 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L R F++ L + ELA LGL QV +WF Sbjct: 139 QLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWF 176
>DLX1_HUMAN (P56177) Homeobox protein DLX-1| Length = 255 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L R F++ L + ELA LGL QV +WF Sbjct: 139 QLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWF 176
>HMB1_TRIGR (P09080) Homeobox protein HB1 (TGHBOX1) (Fragment)| Length = 307 Score = 32.3 bits (72), Expect = 0.49 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 ++ T Q LE+ F L R+ EL+ LGL RQ+ +WF Sbjct: 193 RQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWF 237
>DLX3_MOUSE (Q64205) Homeobox protein DLX-3| Length = 287 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA +LGL QV +WF Sbjct: 140 QLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 177
>DLX3_HUMAN (O60479) Homeobox protein DLX-3| Length = 287 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA +LGL QV +WF Sbjct: 140 QLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 177
>DLL2_XENLA (P53774) Homeobox protein DLL-2 (XDLL-2)| Length = 277 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA +LGL QV +WF Sbjct: 141 QLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 178
>HMB1_STRPU (P13545) Homeobox protein HB1 (SPHBOX1)| Length = 308 Score = 32.3 bits (72), Expect = 0.49 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 ++ T Q LE+ F L R+ EL+ LGL RQ+ +WF Sbjct: 194 RQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWF 238
>DLX1A_BRARE (Q98875) Homeobox protein Dlx1a (DLX-1) (Distal-less homeobox gene| 1a) Length = 252 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L R F++ L + ELA LGL QV +WF Sbjct: 139 QLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWF 176
>BSH_DROME (Q04787) Brain-specific homeobox protein| Length = 427 Score = 32.3 bits (72), Expect = 0.49 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ LE+ FE + L + ELA LGL QV WF Sbjct: 283 QLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWF 320
>PRRX1_CHICK (Q05437) Paired mesoderm homeobox protein 1 (Homeobox protein MHOX)| (GMHOX) (Homeobox protein PRX-1) Length = 245 Score = 32.3 bits (72), Expect = 0.49 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 9/87 (10%) Frame = +1 Query: 193 GGMEEGRGV-KRPFFTSXXXXXXXXXXXXXXXXKKRR--------LTPEQVHLLERSFEE 345 GG E GR + + P TS KK+R Q+ LER FE Sbjct: 56 GGGEPGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFER 115 Query: 346 ENKLEPERKTELARKLGLQPRQVAVWF 426 + + + +LAR++ L +V VWF Sbjct: 116 THYPDAFVREDLARRVNLTEARVQVWF 142
>HXD4A_BRARE (O57374) Homeobox protein Hox-D4a (Hox-D4)| Length = 236 Score = 32.3 bits (72), Expect = 0.49 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T +QV LE+ F L R+ E A L L RQ+ +WF Sbjct: 154 TRQQVLELEKEFHFNRYLTRRRRIESAHTLSLSERQIKIWF 194
>HXA9B_BRARE (Q9YGT5) Homeobox protein Hox-A9b| Length = 258 Score = 32.3 bits (72), Expect = 0.49 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L +R+ E+AR L L RQV +WF Sbjct: 195 KRCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLLNLTERQVKIWF 240
>DLX3_PLEWA (Q91284) Distal-less-like protein DLX-3| Length = 274 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA +LGL QV +WF Sbjct: 137 QLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 174
>DLX3_NOTVI (P53770) Homeobox protein DLX-3 (Box-4) (NVHBOX-4)| Length = 273 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA +LGL QV +WF Sbjct: 136 QLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 173
>HXB9_XENLA (P31272) Homeobox protein Hox-B9 (XlHbox-6)| Length = 232 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F+ L +R+ E+AR L L RQV +WF Sbjct: 182 LEKEFKFNMYLTRDRRHEVARLLNLSERQVKIWF 215
>BARH2_HUMAN (Q9NY43) BarH-like 2 homeobox protein| Length = 387 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q++ LERSFE + L + + +LA L L QV W+ Sbjct: 243 QLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWY 280
>HXC4_RAT (P18865) Homeobox protein Hox-C4 (R3) (Fragment)| Length = 76 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +QV LE+ F L R+ E+A L L RQ+ +WF Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWF 59
>HXBAA_BRARE (Q9PWL7) Homeobox protein Hox-B10a (Hox-B10) (Fragment)| Length = 85 Score = 32.3 bits (72), Expect = 0.49 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ + Q+ LE+ F L ER+ E++R + L RQV +WF Sbjct: 15 KRCPYSKHQILELEKEFLFNMYLTRERRLEISRSINLTDRQVKIWF 60
>HXA4_LINSA (P81192) Homeobox protein Hox-A4 (LsHox 4) (Fragment)| Length = 80 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ LE+ F L R+ E+A L L RQ+ +WF Sbjct: 19 TRHQILELEKEFHFNRYLTRRRRIEIAHALDLSERQIKIWF 59
>HMENA_MYXGL (P31535) Homeobox protein engrailed-like A (EN-A) (Fragment)| Length = 60 Score = 32.3 bits (72), Expect = 0.49 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +Q+ L F+ L ER+ LAR+L L Q+ +WF Sbjct: 2 DQLARLRAEFQANRYLTEERRQNLARELSLNEAQIKIWF 40
>HBX4_ECHGR (P55813) Homeobox protein EgHBX4 (Fragment)| Length = 60 Score = 32.3 bits (72), Expect = 0.49 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 TPEQ+ +E F + + ELA +LG+ ++ VWF Sbjct: 9 TPEQLEAMEEVFGVNRYPDVSMREELASRLGINESKIQVWF 49
>DLX3B_BRARE (Q01702) Homeobox protein Dlx3b (DLX-3) (Distal-less homeobox| protein 3b) Length = 269 Score = 32.3 bits (72), Expect = 0.49 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA +LGL QV +WF Sbjct: 136 QLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 173
>HXA9_AMBME (P50209) Homeobox protein Hox-A9 (Fragment)| Length = 143 Score = 32.0 bits (71), Expect = 0.64 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L +R+ E+AR L L RQV +WF Sbjct: 81 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWF 126
>ZFH2_DROME (P28167) Zinc finger protein 2 (Zinc finger homeodomain protein 2)| Length = 3005 Score = 32.0 bits (71), Expect = 0.64 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = +1 Query: 301 LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 + PEQ++ L ++ E+ + E+++K+ L+ R V VWF Sbjct: 2767 ILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWF 2808 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +1 Query: 292 KRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 + R T Q+ +L+ FE + + L++ L L PR + VWF Sbjct: 2158 RTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWF 2202
>HXA9_HETFR (Q9IA26) Homeobox protein Hox-A9| Length = 260 Score = 32.0 bits (71), Expect = 0.64 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L +R+ E+AR L L RQV +WF Sbjct: 196 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWF 241
>EMX2_MOUSE (Q04744) Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty| spiracles-like protein 2) Length = 253 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +P Q+ LE +FE+ + + + +LA L L QV VWF Sbjct: 163 SPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWF 203
>NKX25_HUMAN (P52952) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)| (Cardiac-specific homeobox) (Homeobox protein CSX) Length = 324 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 QV+ LER F+++ L + +LA L L QV +WF Sbjct: 149 QVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWF 186
>DLX2_ELECQ (P87393) Homeobox protein DLX-2 (Fragment)| Length = 103 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA LGL QV +WF Sbjct: 65 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 102
>TWIST_CAEEL (Q11094) Twist-related protein (CeTwist) (Helix-loop-helix protein| 8) Length = 178 Score = 32.0 bits (71), Expect = 0.64 Identities = 12/37 (32%), Positives = 17/37 (45%) Frame = -1 Query: 215 PRPSSMPPRTGLTPRWNMPAAPAPQSMKSICPLPEPD 105 P PSS+PP + W P Q +CP+ P+ Sbjct: 128 PAPSSIPPHCLMPQPWYQTCPPPKQEFHELCPISTPN 164
>SMOX5_SCHMA (Q26604) Homeobox protein SMOX-5| Length = 284 Score = 32.0 bits (71), Expect = 0.64 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%) Frame = +1 Query: 289 KKRRLTPE-----QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +KRR T Q++ LE +F + L P + +A+ LGL QV WF Sbjct: 35 RKRRKTRTTFSNCQLNELENNFNRQRYLTPTDRDRIAKHLGLTNTQVITWF 85
>HXA9_MOUSE (P09631) Homeobox protein Hox-A9 (Hox-1.7)| Length = 271 Score = 32.0 bits (71), Expect = 0.64 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L +R+ E+AR L L RQV +WF Sbjct: 208 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWF 253
>HXA9_HUMAN (P31269) Homeobox protein Hox-A9 (Hox-1G)| Length = 272 Score = 32.0 bits (71), Expect = 0.64 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L +R+ E+AR L L RQV +WF Sbjct: 209 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWF 254
>DLX5_CHICK (P50577) Homeobox protein DLX-5 (cDlx)| Length = 286 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA LGL QV +WF Sbjct: 147 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 184
>DLX2B_BRARE (Q98876) Homeobox protein Dlx2b (DLX-5) (Distal-less homeobox| protein 2b) Length = 276 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA LGL QV +WF Sbjct: 136 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 173
>RFIP3_HUMAN (O75154) Rab11 family-interacting protein 3 (Rab11-FIP3) (EF| hands-containing Rab-interacting protein) (Eferin) Length = 756 Score = 32.0 bits (71), Expect = 0.64 Identities = 18/39 (46%), Positives = 22/39 (56%) Frame = -1 Query: 215 PRPSSMPPRTGLTPRWNMPAAPAPQSMKSICPLPEPDVL 99 P PS+ PPR+G + P AP P +S PLPE D L Sbjct: 85 PGPSAPPPRSGPRGQLASPDAPGP-GPRSEAPLPELDPL 122
>ZEN2_DROME (P09090) Protein zerknuellt 2 (ZEN-2)| Length = 252 Score = 32.0 bits (71), Expect = 0.64 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LER F L R+ E++++L L RQV +WF Sbjct: 58 LEREFHLNKYLARTRRIEISQRLALTERQVKIWF 91
>HXA9_CAVPO (P51783) Homeobox protein Hox-A9 (Hox-1.7) (Fragment)| Length = 162 Score = 32.0 bits (71), Expect = 0.64 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L +R+ E+AR L L RQV +WF Sbjct: 99 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWF 144
>EMX2_HUMAN (Q04743) Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty| spiracles-like protein 2) Length = 252 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 +P Q+ LE +FE+ + + + +LA L L QV VWF Sbjct: 162 SPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWF 202
>DLX5_RAT (P50575) Homeobox protein DLX-5 (DLX-3) (RDLX)| Length = 289 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA LGL QV +WF Sbjct: 148 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 185
>DLX5_MOUSE (P70396) Homeobox protein DLX-5| Length = 289 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA LGL QV +WF Sbjct: 148 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 185
>DLX5_HUMAN (P56178) Homeobox protein DLX-5| Length = 289 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA LGL QV +WF Sbjct: 148 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 185
>DLX2A_BRARE (P50574) Homeobox protein Dlx2a (DLX-2) (Distal-less homeobox gene| 2a) Length = 270 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA LGL QV +WF Sbjct: 134 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 171
>DLL3_XENLA (P54655) Homeobox protein DLL-3 (XDLL-3)| Length = 289 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA LGL QV +WF Sbjct: 148 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 185
>HXA9_CHICK (Q98924) Homeobox protein Hox-A9 (Fragment)| Length = 169 Score = 32.0 bits (71), Expect = 0.64 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L +R+ E+AR L L RQV +WF Sbjct: 106 KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWF 151
>DLX2_HUMAN (Q07687) Homeobox protein DLX-2| Length = 328 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA LGL QV +WF Sbjct: 163 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 200
>DFD_DROME (P07548) Homeotic protein deformed| Length = 586 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ LE+ F L R+ E+A L L RQ+ +WF Sbjct: 374 TRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWF 414
>NKX25_MOUSE (P42582) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)| (Cardiac-specific homeobox) (Homeobox protein CSX) Length = 318 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 QV+ LER F+++ L + +LA L L QV +WF Sbjct: 148 QVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWF 185
>SMOX2_SCHMA (Q26601) Homeobox protein engrailed-like SMOX-2| Length = 524 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ L + FE+ L+ R+ +LA +L L+ QV +WF Sbjct: 431 TVPQLKRLSQEFEKNRYLDELRRKKLATELDLRESQVKIWF 471
>DLLH_BRAFL (P53772) Homeobox protein DLL homolog| Length = 321 Score = 32.0 bits (71), Expect = 0.64 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ L R F+ L + ELA +LGL QV +WF Sbjct: 124 TSFQLQQLNRRFQRTQYLALPERAELAAQLGLTQTQVKIWF 164
>DLX2_MOUSE (P40764) Homeobox protein DLX-2 (Homeobox protein TES-1)| Length = 332 Score = 32.0 bits (71), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+R F++ L + ELA LGL QV +WF Sbjct: 166 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 203
>HMD2_CHICK (Q02814) Homeobox protein CHOX-CAD2 (Fragment)| Length = 60 Score = 32.0 bits (71), Expect = 0.64 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +1 Query: 325 LERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 LE+ F + RK+ELA LGL RQV WF Sbjct: 16 LEKEFHCNRYITIRRKSELAVNLGLSERQVKSWF 49
>HXA10_HUMAN (P31260) Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL)| Length = 393 Score = 31.6 bits (70), Expect = 0.83 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L ER+ E++R + L RQV +WF Sbjct: 322 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWF 367
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 31.6 bits (70), Expect = 0.83 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+ F E L +R+ L+ +LGL Q+ +WF Sbjct: 509 QLQRLKNEFNENRYLTEKRRQTLSAELGLNEAQIKIWF 546
>NKX25_CHICK (Q90788) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)| (cNKX-2.5) Length = 294 Score = 31.6 bits (70), Expect = 0.83 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 QV+ LER F+++ L + LA L L QV +WF Sbjct: 130 QVYELERRFKQQKYLSAPERDHLANVLKLTSTQVKIWF 167
>HMIN_DROME (P05527) Homeobox protein invected| Length = 576 Score = 31.6 bits (70), Expect = 0.83 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L+ F E L +R+ +L+ +LGL Q+ +WF Sbjct: 482 QLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWF 519
>HXA10_HETFR (Q9IA27) Homeobox protein Hox-A10| Length = 271 Score = 31.6 bits (70), Expect = 0.83 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L ER+ E++R + L RQV +WF Sbjct: 200 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWF 245
>PAX3_MOUSE (P24610) Paired box protein Pax-3| Length = 479 Score = 31.6 bits (70), Expect = 0.83 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = +1 Query: 289 KKRR----LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+RR T EQ+ LER+FE + + + ELA++ L +V VWF Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWF 267
>PAX3_HUMAN (P23760) Paired box protein Pax-3 (HUP2)| Length = 479 Score = 31.6 bits (70), Expect = 0.83 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = +1 Query: 289 KKRR----LTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+RR T EQ+ LER+FE + + + ELA++ L +V VWF Sbjct: 218 KQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWF 267
>ZHX2_PONPY (Q5R7F2) Zinc fingers and homeoboxes protein 2 (Zinc finger and| homeodomain protein 2) Length = 837 Score = 31.6 bits (70), Expect = 0.83 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 EQVHLL +F P+ +LA K GL ++ WF Sbjct: 638 EQVHLLRSTFARTQWPTPQEYDQLAAKTGLVRTEIVRWF 676
>ZHX2_HUMAN (Q9Y6X8) Zinc fingers and homeoboxes protein 2 (Zinc finger and| homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP) Length = 837 Score = 31.6 bits (70), Expect = 0.83 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 EQVHLL +F P+ +LA K GL ++ WF Sbjct: 638 EQVHLLRSTFARTQWPTPQEYDQLAAKTGLVRTEIVRWF 676
>ZHX2_MOUSE (Q8C0C0) Zinc fingers and homeoboxes protein 2 (Zinc finger and| homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP) Length = 836 Score = 31.6 bits (70), Expect = 0.83 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +1 Query: 310 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 EQVHLL +F P+ +LA K GL ++ WF Sbjct: 638 EQVHLLRSTFARTQWPTPQEYDQLAAKTGLVRTEIVRWF 676
>NKX25_XENLA (P42583) Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E)| (XNkx-2.5) Length = 299 Score = 31.6 bits (70), Expect = 0.83 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 QV+ LER F+++ L + LA L L QV +WF Sbjct: 135 QVYELERRFKQQKYLSAPERDHLANVLKLTSTQVKIWF 172
>HXB9_MOUSE (P20615) Homeobox protein Hox-B9 (Hox-2.5)| Length = 250 Score = 31.6 bits (70), Expect = 0.83 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L +R+ E+AR L L RQV +WF Sbjct: 188 KRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWF 233
>HXB9_HUMAN (P17482) Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5)| Length = 250 Score = 31.6 bits (70), Expect = 0.83 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L +R+ E+AR L L RQV +WF Sbjct: 188 KRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWF 233
>HXA10_MOUSE (P31310) Homeobox protein Hox-A10 (Hox-1.8)| Length = 399 Score = 31.6 bits (70), Expect = 0.83 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L ER+ E++R + L RQV +WF Sbjct: 328 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWF 373
>DLX4A_BRARE (Q98879) Homeobox protein Dlx4a (DLX-8) (Distal-less homeobox| protein 4a) Length = 250 Score = 31.6 bits (70), Expect = 0.83 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +1 Query: 313 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 Q+ L + F++ L + +LA KLGL QV +WF Sbjct: 134 QLQALNQRFQQTQYLALPERADLAAKLGLTQTQVKIWF 171
>ZEN1_DROME (P09089) Protein zerknuellt 1 (ZEN-1)| Length = 353 Score = 31.6 bits (70), Expect = 0.83 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ LE F+ L R+ E+A++L L RQV +WF Sbjct: 98 TSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWF 138
>YOX1_YEAST (P34161) Homeobox protein YOX1| Length = 385 Score = 31.6 bits (70), Expect = 0.83 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+RR + +++ +L+ FE+ E++ ELA + + V +WF Sbjct: 179 KRRRTSSQELSILQAEFEKCPAPSKEKRIELAESCHMTEKAVQIWF 224
>HMB4_TRIGR (P10179) Homeobox protein HB4 (Fragment)| Length = 107 Score = 31.6 bits (70), Expect = 0.83 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L +R+ E+AR L L RQV +WF Sbjct: 45 KRCPYTKFQTLELEKEFLFNMYLTRDRRLEIARLLSLTERQVKIWF 90
>HXAAB_BRARE (Q8AWY2) Homeobox protein Hox-A10b (Hox-A10)| Length = 330 Score = 31.6 bits (70), Expect = 0.83 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 289 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 K+ T Q LE+ F L ER+ E++R + L RQV +WF Sbjct: 259 KRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWF 304
>ZEN_DROSU (Q24648) Protein zerknuellt| Length = 373 Score = 31.6 bits (70), Expect = 0.83 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +1 Query: 304 TPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWF 426 T Q+ LE F+ L R+ E+A++L L RQV +WF Sbjct: 96 TSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWF 136 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,770,922 Number of Sequences: 219361 Number of extensions: 814618 Number of successful extensions: 4885 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 4391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4845 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
