ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast71c06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1363 Score = 299 bits (151), Expect = 4e-78 Identities = 238/267 (89%) Strand = Plus / Plus Query: 162 catgttccatcgaggggtgaggccggtcctcggcggcatggaagaagggcgcggcgtgaa 221 ||||||||||||||||| ||| ||||| |||||| ||||| |||||||||||| || Sbjct: 147 catgttccatcgaggggcgagaccggtgctcggcatggaggaaggagggcgcggcgtcaa 206 Query: 222 gcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagcagct 281 |||||||||||||||| | || ||||| || || || ||||||||||||||||||||||| Sbjct: 207 gcggcccttcttcaccacccccgacgagctcctcgaagaggagtactacgacgagcagct 266 Query: 282 cccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagcttcga 341 ||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 267 cccggagaagaagcggcgcctcacgccggagcaggtgcatctgctggagaggagcttcga 326 Query: 342 ggaggagaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgca 401 |||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||| Sbjct: 327 ggaggagaacaagctggagccggagcggaagacggagctggcgcggaagctagggctgca 386 Query: 402 gccgcgccaggtggccgtctggttcca 428 |||||| ||||| ||||| |||||||| Sbjct: 387 gccgcggcaggtcgccgtgtggttcca 413 Score = 99.6 bits (50), Expect = 7e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 73 gcgatggagcccggccggctcatcttcaacacgtcgggctccggcaacggacagatgctc 132 ||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||||| Sbjct: 43 gcgatggagtccggccggctcatcttcagcacggcgggctccggcgccgggcagatgctc 102 Query: 133 ttcatggactgcggcgccggcg 154 ||| ||||||||||||| |||| Sbjct: 103 ttcttggactgcggcgctggcg 124
>ref|XM_506952.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0072H09.24 mRNA Length = 1710 Score = 299 bits (151), Expect = 4e-78 Identities = 238/267 (89%) Strand = Plus / Plus Query: 162 catgttccatcgaggggtgaggccggtcctcggcggcatggaagaagggcgcggcgtgaa 221 ||||||||||||||||| ||| ||||| |||||| ||||| |||||||||||| || Sbjct: 644 catgttccatcgaggggcgagaccggtgctcggcatggaggaaggagggcgcggcgtcaa 703 Query: 222 gcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagcagct 281 |||||||||||||||| | || ||||| || || || ||||||||||||||||||||||| Sbjct: 704 gcggcccttcttcaccacccccgacgagctcctcgaagaggagtactacgacgagcagct 763 Query: 282 cccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagcttcga 341 ||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 764 cccggagaagaagcggcgcctcacgccggagcaggtgcatctgctggagaggagcttcga 823 Query: 342 ggaggagaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgca 401 |||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||| Sbjct: 824 ggaggagaacaagctggagccggagcggaagacggagctggcgcggaagctagggctgca 883 Query: 402 gccgcgccaggtggccgtctggttcca 428 |||||| ||||| ||||| |||||||| Sbjct: 884 gccgcggcaggtcgccgtgtggttcca 910 Score = 99.6 bits (50), Expect = 7e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 73 gcgatggagcccggccggctcatcttcaacacgtcgggctccggcaacggacagatgctc 132 ||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||||| Sbjct: 540 gcgatggagtccggccggctcatcttcagcacggcgggctccggcgccgggcagatgctc 599 Query: 133 ttcatggactgcggcgccggcg 154 ||| ||||||||||||| |||| Sbjct: 600 ttcttggactgcggcgctggcg 621
>gb|AY559045.1| Oryza sativa homeodomain leucine zipper protein 16 (hox16) mRNA, complete cds Length = 1472 Score = 299 bits (151), Expect = 4e-78 Identities = 238/267 (89%) Strand = Plus / Plus Query: 162 catgttccatcgaggggtgaggccggtcctcggcggcatggaagaagggcgcggcgtgaa 221 ||||||||||||||||| ||| ||||| |||||| ||||| |||||||||||| || Sbjct: 233 catgttccatcgaggggcgagaccggtgctcggcatggaggaaggagggcgcggcgtcaa 292 Query: 222 gcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagcagct 281 |||||||||||||||| | || ||||| || || || ||||||||||||||||||||||| Sbjct: 293 gcggcccttcttcaccacccccgacgagctcctcgaagaggagtactacgacgagcagct 352 Query: 282 cccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagcttcga 341 ||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 353 cccggagaagaagcggcgcctcacgccggagcaggtgcatctgctggagaggagcttcga 412 Query: 342 ggaggagaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgca 401 |||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||| Sbjct: 413 ggaggagaacaagctggagccggagcggaagacggagctggcgcggaagctagggctgca 472 Query: 402 gccgcgccaggtggccgtctggttcca 428 |||||| ||||| ||||| |||||||| Sbjct: 473 gccgcggcaggtcgccgtgtggttcca 499 Score = 99.6 bits (50), Expect = 7e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 73 gcgatggagcccggccggctcatcttcaacacgtcgggctccggcaacggacagatgctc 132 ||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||||| Sbjct: 129 gcgatggagtccggccggctcatcttcagcacggcgggctccggcgccgggcagatgctc 188 Query: 133 ttcatggactgcggcgccggcg 154 ||| ||||||||||||| |||| Sbjct: 189 ttcttggactgcggcgctggcg 210
>dbj|AK119592.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D05, full insert sequence Length = 1710 Score = 299 bits (151), Expect = 4e-78 Identities = 238/267 (89%) Strand = Plus / Plus Query: 162 catgttccatcgaggggtgaggccggtcctcggcggcatggaagaagggcgcggcgtgaa 221 ||||||||||||||||| ||| ||||| |||||| ||||| |||||||||||| || Sbjct: 644 catgttccatcgaggggcgagaccggtgctcggcatggaggaaggagggcgcggcgtcaa 703 Query: 222 gcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagcagct 281 |||||||||||||||| | || ||||| || || || ||||||||||||||||||||||| Sbjct: 704 gcggcccttcttcaccacccccgacgagctcctcgaagaggagtactacgacgagcagct 763 Query: 282 cccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagcttcga 341 ||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 764 cccggagaagaagcggcgcctcacgccggagcaggtgcatctgctggagaggagcttcga 823 Query: 342 ggaggagaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgca 401 |||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||| Sbjct: 824 ggaggagaacaagctggagccggagcggaagacggagctggcgcggaagctagggctgca 883 Query: 402 gccgcgccaggtggccgtctggttcca 428 |||||| ||||| ||||| |||||||| Sbjct: 884 gccgcggcaggtcgccgtgtggttcca 910 Score = 99.6 bits (50), Expect = 7e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 73 gcgatggagcccggccggctcatcttcaacacgtcgggctccggcaacggacagatgctc 132 ||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||||| Sbjct: 540 gcgatggagtccggccggctcatcttcagcacggcgggctccggcgccgggcagatgctc 599 Query: 133 ttcatggactgcggcgccggcg 154 ||| ||||||||||||| |||| Sbjct: 600 ttcttggactgcggcgctggcg 621
>gb|AY105265.1| Zea mays PCO062717 mRNA sequence Length = 2229 Score = 291 bits (147), Expect = 9e-76 Identities = 207/227 (91%) Strand = Plus / Plus Query: 202 gaagaagggcgcggcgtgaagcggcccttcttcacctcgccggacgacctgctggaggag 261 ||||||||||||||||| || |||||||||||||||||||| ||||| || || ||||| Sbjct: 851 gaagaagggcgcggcgtaaaacggcccttcttcacctcgcccgacgagctcctcgaggaa 910 Query: 262 gagtactacgacgagcagctcccggagaagaagcgacgcctcaccccggagcaggtccac 321 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| | Sbjct: 911 gagtactacgacgagcagctgccggagaagaagcgccgcctcaccccagagcaggtgctt 970 Query: 322 ctgctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctg 381 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 971 ctgctggagaggagcttcgaggaggagaacaagctggagccggagcgcaagacggagctg 1030 Query: 382 gcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 || |||||||| || |||||||| ||||||||||||||||||||||| Sbjct: 1031 gcgcgcaagctgggcctgcagcctcgccaggtggccgtctggttcca 1077 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 88 cggctcatcttcaacacgtcgggctccggcaacggacagatgctcttcatggactgcggc 147 ||||||||||||||| || ||||||| ||| ||| |||||||||||| | ||||||||| Sbjct: 731 cggctcatcttcaacgcgccgggctctggcgccgggcagatgctcttcctcgactgcggc 790 Query: 148 gccggcg 154 || |||| Sbjct: 791 gcaggcg 797
>gb|AY554029.1| Oryza sativa (japonica cultivar-group) clone R4057 Hox16 (hox16) mRNA, complete cds Length = 1199 Score = 285 bits (144), Expect = 6e-74 Identities = 207/228 (90%) Strand = Plus / Plus Query: 201 ggaagaagggcgcggcgtgaagcggcccttcttcacctcgccggacgacctgctggagga 260 ||||| |||||||||||| |||||||||||||||||| | || ||||| || || || || Sbjct: 37 ggaaggagggcgcggcgtcaagcggcccttcttcaccacccccgacgagctcctcgaaga 96 Query: 261 ggagtactacgacgagcagctcccggagaagaagcgacgcctcaccccggagcaggtcca 320 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 97 ggagtactacgacgagcagctcccggagaagaagcggcgcctcacgccggagcaggtgca 156 Query: 321 cctgctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagct 380 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 157 tctgctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagct 216 Query: 381 ggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| || ||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 217 ggcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 264
>dbj|AK058364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F09, full insert sequence Length = 1363 Score = 285 bits (144), Expect = 6e-74 Identities = 234/264 (88%) Strand = Plus / Plus Query: 165 gttccatcgaggggtgaggccggtcctcggcggcatggaagaagggcgcggcgtgaagcg 224 |||||||||||||| || ||||| |||||| ||||| |||||||||||| ||||| Sbjct: 150 gttccatcgaggggcaagaccggtgctcggcatggaggaaggagggcgcggcgtcaagcg 209 Query: 225 gcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagcagctccc 284 ||||||||||||| | || ||||| || || || |||||||||||||||||||||||||| Sbjct: 210 gcccttcttcaccacccccgacgagctcctcgaagaggagtactacgacgagcagctccc 269 Query: 285 ggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagcttcgagga 344 |||||||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct: 270 ggagaagaagcggcgcctcacgccggagcaggtgcatctgctggagaggagcttcgagga 329 Query: 345 ggagaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgcagcc 404 ||||||||||||||||||||| |||||||||||||||| || ||||| ||||||||||| Sbjct: 330 ggagaacaagctggagccggagcggaagacggagctggcgcggaagctagggctgcagcc 389 Query: 405 gcgccaggtggccgtctggttcca 428 ||| ||||| ||||| |||||||| Sbjct: 390 gcggcaggtcgccgtgtggttcca 413 Score = 99.6 bits (50), Expect = 7e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 73 gcgatggagcccggccggctcatcttcaacacgtcgggctccggcaacggacagatgctc 132 ||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||||| Sbjct: 43 gcgatggagtccggccggctcatcttcagcacggcgggctccggcgccgggcagatgctc 102 Query: 133 ttcatggactgcggcgccggcg 154 ||| ||||||||||||| |||| Sbjct: 103 ttcttggactgcggcgctggcg 124
>ref|XM_482406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1837 Score = 153 bits (77), Expect = 6e-34 Identities = 146/169 (86%) Strand = Plus / Plus Query: 219 gaagcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagca 278 ||||||||| |||||||| ||| || || || |||||||||||||||||||||||||| Sbjct: 680 gaagcggccgttcttcacgacgcacgaggagctcctggaggaggagtactacgacgagca 739 Query: 279 gctcccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagctt 338 | |||||||||||||| || || || |||||||||| || |||||||| ||||||| Sbjct: 740 ggcgccggagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagctt 799 Query: 339 cgaggaggagaacaagctggagccggaaaggaagacggagctggcccgc 387 ||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 800 cgaggaggagaacaagctggagccggagcggaagacggagctcgcccgc 848
>ref|XM_507232.1| PREDICTED Oryza sativa (japonica cultivar-group), P0433E10.14 mRNA Length = 1855 Score = 153 bits (77), Expect = 6e-34 Identities = 146/169 (86%) Strand = Plus / Plus Query: 219 gaagcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagca 278 ||||||||| |||||||| ||| || || || |||||||||||||||||||||||||| Sbjct: 679 gaagcggccgttcttcacgacgcacgaggagctcctggaggaggagtactacgacgagca 738 Query: 279 gctcccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagctt 338 | |||||||||||||| || || || |||||||||| || |||||||| ||||||| Sbjct: 739 ggcgccggagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagctt 798 Query: 339 cgaggaggagaacaagctggagccggaaaggaagacggagctggcccgc 387 ||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 799 cgaggaggagaacaagctggagccggagcggaagacggagctcgcccgc 847
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 153 bits (77), Expect = 6e-34 Identities = 146/169 (86%) Strand = Plus / Minus Query: 219 gaagcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagca 278 ||||||||| |||||||| ||| || || || |||||||||||||||||||||||||| Sbjct: 19880369 gaagcggccgttcttcacgacgcacgaggagctcctggaggaggagtactacgacgagca 19880310 Query: 279 gctcccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagctt 338 | |||||||||||||| || || || |||||||||| || |||||||| ||||||| Sbjct: 19880309 ggcgccggagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagctt 19880250 Query: 339 cgaggaggagaacaagctggagccggaaaggaagacggagctggcccgc 387 ||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 19880249 cgaggaggagaacaagctggagccggagcggaagacggagctcgcccgc 19880201 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Minus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 23797474 gctggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggc 23797415 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||||||||||||||||||||| |||||||||||||| Sbjct: 23797414 gcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 23797370 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 9093050 gcggcgccggcgccgccggc 9093031
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 153 bits (77), Expect = 6e-34 Identities = 146/169 (86%) Strand = Plus / Minus Query: 219 gaagcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagca 278 ||||||||| |||||||| ||| || || || |||||||||||||||||||||||||| Sbjct: 48547 gaagcggccgttcttcacgacgcacgaggagctcctggaggaggagtactacgacgagca 48488 Query: 279 gctcccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagctt 338 | |||||||||||||| || || || |||||||||| || |||||||| ||||||| Sbjct: 48487 ggcgccggagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagctt 48428 Query: 339 cgaggaggagaacaagctggagccggaaaggaagacggagctggcccgc 387 ||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 48427 cgaggaggagaacaagctggagccggagcggaagacggagctcgcccgc 48379
>gb|AF145729.1|AF145729 Oryza sativa homeodomain leucine zipper protein (Oshox5) mRNA, complete cds Length = 1538 Score = 153 bits (77), Expect = 6e-34 Identities = 146/169 (86%) Strand = Plus / Plus Query: 219 gaagcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagca 278 ||||||||| |||||||| ||| || || || |||||||||||||||||||||||||| Sbjct: 396 gaagcggccgttcttcacgacgcacgaggagctcctggaggaggagtactacgacgagca 455 Query: 279 gctcccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagctt 338 | |||||||||||||| || || || |||||||||| || |||||||| ||||||| Sbjct: 456 ggcgccggagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagctt 515 Query: 339 cgaggaggagaacaagctggagccggaaaggaagacggagctggcccgc 387 ||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 516 cgaggaggagaacaagctggagccggagcggaagacggagctcgcccgc 564
>dbj|AK110561.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C12, full insert sequence Length = 1269 Score = 153 bits (77), Expect = 6e-34 Identities = 146/169 (86%) Strand = Plus / Plus Query: 219 gaagcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagca 278 ||||||||| |||||||| ||| || || || |||||||||||||||||||||||||| Sbjct: 289 gaagcggccgttcttcacgacgcacgaggaactcctggaggaggagtactacgacgagca 348 Query: 279 gctcccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagctt 338 | |||||||||||||| || || || |||||||||| || |||||||| ||||||| Sbjct: 349 ggcgccggagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagctt 408 Query: 339 cgaggaggagaacaagctggagccggaaaggaagacggagctggcccgc 387 ||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 409 cgaggaggagaacaagctggagccggagcggaagacggagctcgcccgc 457
>dbj|AK101569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050G15, full insert sequence Length = 1836 Score = 153 bits (77), Expect = 6e-34 Identities = 146/169 (86%) Strand = Plus / Plus Query: 219 gaagcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagca 278 ||||||||| |||||||| ||| || || || |||||||||||||||||||||||||| Sbjct: 679 gaagcggccgttcttcacgacgcacgaggagctcctggaggaggagtactacgacgagca 738 Query: 279 gctcccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagctt 338 | |||||||||||||| || || || |||||||||| || |||||||| ||||||| Sbjct: 739 ggcgccggagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagctt 798 Query: 339 cgaggaggagaacaagctggagccggaaaggaagacggagctggcccgc 387 ||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 799 cgaggaggagaacaagctggagccggagcggaagacggagctcgcccgc 847
>dbj|AK100634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110A12, full insert sequence Length = 1854 Score = 153 bits (77), Expect = 6e-34 Identities = 146/169 (86%) Strand = Plus / Plus Query: 219 gaagcggcccttcttcacctcgccggacgacctgctggaggaggagtactacgacgagca 278 ||||||||| |||||||| ||| || || || |||||||||||||||||||||||||| Sbjct: 678 gaagcggccgttcttcacgacgcacgaggagctcctggaggaggagtactacgacgagca 737 Query: 279 gctcccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagctt 338 | |||||||||||||| || || || |||||||||| || |||||||| ||||||| Sbjct: 738 ggcgccggagaagaagcggcggctgacggcggagcaggtgcagatgctggagcggagctt 797 Query: 339 cgaggaggagaacaagctggagccggaaaggaagacggagctggcccgc 387 ||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 798 cgaggaggagaacaagctggagccggagcggaagacggagctcgcccgc 846
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 149 bits (75), Expect = 9e-33 Identities = 99/107 (92%) Strand = Plus / Plus Query: 322 ctgctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctg 381 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 30400811 ctgctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctg 30400870 Query: 382 gcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 || || ||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 30400871 gcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 30400917 Score = 145 bits (73), Expect = 1e-31 Identities = 106/117 (90%) Strand = Plus / Plus Query: 201 ggaagaagggcgcggcgtgaagcggcccttcttcacctcgccggacgacctgctggagga 260 ||||| |||||||||||| |||||||||||||||||| | || ||||| || || || || Sbjct: 30400578 ggaaggagggcgcggcgtcaagcggcccttcttcaccacccccgacgagctcctcgaaga 30400637 Query: 261 ggagtactacgacgagcagctcccggagaagaagcgacgcctcaccccggagcaggt 317 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 30400638 ggagtactacgacgagcagctcccggagaagaagcggcgcctcacgccggagcaggt 30400694 Score = 99.6 bits (50), Expect = 7e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 73 gcgatggagcccggccggctcatcttcaacacgtcgggctccggcaacggacagatgctc 132 ||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||||| Sbjct: 30400335 gcgatggagtccggccggctcatcttcagcacggcgggctccggcgccgggcagatgctc 30400394 Query: 133 ttcatggactgcggcgccggcg 154 ||| ||||||||||||| |||| Sbjct: 30400395 ttcttggactgcggcgctggcg 30400416 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 369 gaagacggagctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||| |||||||||| || ||||||||||||||||||||||||||||| |||||||||| Sbjct: 26162176 gaaggcggagctggcgcgggagctcgggctgcagccgcgccaggtggccatctggttcca 26162235 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 8538489 cggcgccggcgccgccggca 8538508
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 149 bits (75), Expect = 9e-33 Identities = 99/107 (92%) Strand = Plus / Plus Query: 322 ctgctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctg 381 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 81671 ctgctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctg 81730 Query: 382 gcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 || || ||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 81731 gcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 81777 Score = 145 bits (73), Expect = 1e-31 Identities = 106/117 (90%) Strand = Plus / Plus Query: 201 ggaagaagggcgcggcgtgaagcggcccttcttcacctcgccggacgacctgctggagga 260 ||||| |||||||||||| |||||||||||||||||| | || ||||| || || || || Sbjct: 81438 ggaaggagggcgcggcgtcaagcggcccttcttcaccacccccgacgagctcctcgaaga 81497 Query: 261 ggagtactacgacgagcagctcccggagaagaagcgacgcctcaccccggagcaggt 317 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 81498 ggagtactacgacgagcagctcccggagaagaagcggcgcctcacgccggagcaggt 81554 Score = 99.6 bits (50), Expect = 7e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 73 gcgatggagcccggccggctcatcttcaacacgtcgggctccggcaacggacagatgctc 132 ||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||||| Sbjct: 81195 gcgatggagtccggccggctcatcttcagcacggcgggctccggcgccgggcagatgctc 81254 Query: 133 ttcatggactgcggcgccggcg 154 ||| ||||||||||||| |||| Sbjct: 81255 ttcttggactgcggcgctggcg 81276
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 149 bits (75), Expect = 9e-33 Identities = 99/107 (92%) Strand = Plus / Plus Query: 322 ctgctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctg 381 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6859 ctgctggagaggagcttcgaggaggagaacaagctggagccggagcggaagacggagctg 6918 Query: 382 gcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 || || ||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 6919 gcgcggaagctagggctgcagccgcggcaggtcgccgtgtggttcca 6965 Score = 145 bits (73), Expect = 1e-31 Identities = 106/117 (90%) Strand = Plus / Plus Query: 201 ggaagaagggcgcggcgtgaagcggcccttcttcacctcgccggacgacctgctggagga 260 ||||| |||||||||||| |||||||||||||||||| | || ||||| || || || || Sbjct: 6626 ggaaggagggcgcggcgtcaagcggcccttcttcaccacccccgacgagctcctcgaaga 6685 Query: 261 ggagtactacgacgagcagctcccggagaagaagcgacgcctcaccccggagcaggt 317 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 6686 ggagtactacgacgagcagctcccggagaagaagcggcgcctcacgccggagcaggt 6742 Score = 99.6 bits (50), Expect = 7e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 73 gcgatggagcccggccggctcatcttcaacacgtcgggctccggcaacggacagatgctc 132 ||||||||| |||||||||||||||||| |||| ||||||||||| ||| ||||||||| Sbjct: 6383 gcgatggagtccggccggctcatcttcagcacggcgggctccggcgccgggcagatgctc 6442 Query: 133 ttcatggactgcggcgccggcg 154 ||| ||||||||||||| |||| Sbjct: 6443 ttcttggactgcggcgctggcg 6464
>gb|AF264731.1|AF264731 Oryza sativa microsatellite 25CAC sequence Length = 1201 Score = 127 bits (64), Expect = 3e-26 Identities = 98/108 (90%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 322 ctgctggagaggagcttcgaggaggagaa-caagctggagccggaaaggaagacggagct 380 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 192 ctgctggagaggagcttcgaggaggagaaacaagctggagccggagcggaagacggagct 251 Query: 381 ggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| || ||||| ||||||||||||| ||||| ||||| |||||||| Sbjct: 252 ggcgcggaagctatggctgcagccgcggcaggtcgccgtgtggttcca 299 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/59 (93%), Gaps = 2/59 (3%) Strand = Plus / Plus Query: 259 gaggagtactacgacgagcagctcccggagaagaagcgacgcctcaccccggagcaggt 317 |||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 19 gaggagtactac--cgagcagctcccggagaagaagcggcgcctcacgccggagcaggt 75
>gb|AY104388.1| Zea mays PCO136074 mRNA sequence Length = 1227 Score = 119 bits (60), Expect = 8e-24 Identities = 111/128 (86%) Strand = Plus / Plus Query: 256 gaggaggagtactacgacgagcagctcccggagaagaagcgacgcctcaccccggagcag 315 |||||||||||||||||||||||| |||||||||||||| || || || |||||||| Sbjct: 959 gaggaggagtactacgacgagcaggcgccggagaagaagcgccgactgacggcggagcag 1018 Query: 316 gtccacctgctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacg 375 || || ||||||||| |||||||||| || |||||||||||||||||||| | ||||| Sbjct: 1019 gtgcagctgctggagcggagcttcgaagaagagaacaagctggagccggagcgcaagacc 1078 Query: 376 gagctggc 383 |||||||| Sbjct: 1079 gagctggc 1086
>ref|XM_482997.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1412 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 659 gctggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggc 718 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||||||||||||||||||||| |||||||||||||| Sbjct: 719 gcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 763
>ref|XM_507271.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0092C08.26 mRNA Length = 1916 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 656 gctggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggc 715 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||||||||||||||||||||| |||||||||||||| Sbjct: 716 gcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 760
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Minus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 86674 gctggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggc 86615 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||||||||||||||||||||| |||||||||||||| Sbjct: 86614 gcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 86570
>dbj|AK106818.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D05, full insert sequence Length = 1927 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 656 gctggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggc 715 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||||||||||||||||||||| |||||||||||||| Sbjct: 716 gcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 760
>dbj|AK068244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140I04, full insert sequence Length = 1412 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 659 gctggagcggagcttcgagacggagaacaagctggagccggagcggaaggcgcggctggc 718 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||||||||||||||||||||| |||||||||||||| Sbjct: 719 gcgcgacctcgggctgcagccgcgccaggtcgccgtctggttcca 763
>gb|BT018458.1| Zea mays clone EL01N0412H10.d mRNA sequence Length = 1209 Score = 105 bits (53), Expect = 1e-19 Identities = 121/144 (84%) Strand = Plus / Plus Query: 285 ggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagcttcgagga 344 |||||||||||| ||||| | | | |||||||| | | ||||||| |||||||||||| Sbjct: 429 ggagaagaagcggcgcctgagctccgagcaggtgcgcgcgctggagcggagcttcgaggt 488 Query: 345 ggagaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgcagcc 404 ||||||||||||||||||||| | ||| || |||||| ||| | ||| | |||||||| Sbjct: 489 ggagaacaagctggagccggagcgcaaggcgcggctggcgcgcgacctcngcctgcagcc 548 Query: 405 gcgccaggtggccgtctggttcca 428 ||||||||| |||||||||||||| Sbjct: 549 gcgccaggtcgccgtctggttcca 572
>ref|XM_506668.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1595_D08.21 mRNA Length = 1473 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| |||||||||||| |||||||||||| ||||| || ||||| || |||||| Sbjct: 514 gctggagcggagcttcgaggtggagaacaagcttgagcctgagcggaaggcgcggctggc 573 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 574 gcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 618
>ref|XM_450967.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1463 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| |||||||||||| |||||||||||| ||||| || ||||| || |||||| Sbjct: 518 gctggagcggagcttcgaggtggagaacaagcttgagcctgagcggaaggcgcggctggc 577 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 578 gcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 622
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| |||||||||||| |||||||||||| ||||| || ||||| || |||||| Sbjct: 17849147 gctggagcggagcttcgaggtggagaacaagcttgagcctgagcggaaggcgcggctggc 17849206 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 17849207 gcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 17849251 Score = 52.0 bits (26), Expect = 0.002 Identities = 88/108 (81%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 324 gctggagaggagcttcgaggaggagaa---caagctggagccggaaaggaagacggagct 380 ||||||| ||||||||||||||||||| |||||||||||||| |||||| ||||| Sbjct: 12729051 gctggagcggagcttcgaggaggagaagcggaagctggagccggagcggaagagcgagct 12728992 Query: 381 ggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| || |||||| | |||||| ||||||||||| |||||||| Sbjct: 12728991 ggcgcggcgtctcgggatcgcgccgcggcaggtggccgtgtggttcca 12728944
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| |||||||||||| |||||||||||| ||||| || ||||| || |||||| Sbjct: 89791 gctggagcggagcttcgaggtggagaacaagcttgagcctgagcggaaggcgcggctggc 89850 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 89851 gcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 89895
>gb|AF145728.1|AF145728 Oryza sativa homeodomain leucine zipper protein (Oshox4) mRNA, complete cds Length = 1423 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| |||||||||||| |||||||||||| ||||| || ||||| || |||||| Sbjct: 484 gctggagcggagcttcgaggtggagaacaagcttgagcctgagcggaaggcgcggctggc 543 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 544 gcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 588
>dbj|AK099710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077J22, full insert sequence Length = 1463 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| |||||||||||| |||||||||||| ||||| || ||||| || |||||| Sbjct: 518 gctggagcggagcttcgaggtggagaacaagcttgagcctgagcggaaggcgcggctggc 577 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 578 gcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 622
>dbj|AK105484.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B05, full insert sequence Length = 1473 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| |||||||||||| |||||||||||| ||||| || ||||| || |||||| Sbjct: 514 gctggagcggagcttcgaggtggagaacaagcttgagcctgagcggaaggcgcggctggc 573 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 574 gcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 618
>gb|DQ353855.1| Triticum aestivum homeodomain-leucine zipper transcription factor TaHDZipI-1 mRNA, complete cds Length = 963 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 325 ctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggcc 384 |||||| |||||||||||| ||||||||||||||||||||| | ||| || |||||| Sbjct: 196 ctggagcggagcttcgaggtggagaacaagctggagccggagcgcaaggcgcggctggcg 255 Query: 385 cgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| | || || ||||||||||||||||| |||||||||||||| Sbjct: 256 cgcgaccttggcctgcagccgcgccaggtcgccgtctggttcca 299
>gb|L22850.1|HNNH7P Helianthus annuus homeodomain containing protein (HAHB-7) mRNA, partial cds Length = 240 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 265 tactacgacgagcagctcccggagaagaagcgacgcctcaccccggagcaggtccacctg 324 |||||||||||||| | | |||||||| || || |||| ||| |||||||| ||| || Sbjct: 82 tactacgacgagcaattgacagagaagaaacggcgtctcagccctgagcaggtacacatg 141 Query: 325 ctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||| || ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 142 ctggagatgagttttgaggaggagaacaagctggagccagagaggaagaccgagctggc 200
>ref|NM_196409.1| Oryza sativa (japonica cultivar-group) putative homeotic protein (OSJNBb0044I14.6), mRNA Length = 1056 Score = 89.7 bits (45), Expect = 7e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| | |||||||||||||||||| ||||| || ||||||| Sbjct: 345 gctggagcggagcttcgagtccgggaacaagctggagccggagcggaaggcgcagctggc 404 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| ||| |||||||||||||| ||||||||| |||||||||| Sbjct: 405 gcgcgcgctggggctgcagccgcggcaggtggccatctggttcca 449
>ref|XM_470308.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1571 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Plus Query: 348 gaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgcagccgcg 407 |||||||||||||||||| |||||| | |||| |||||| |||||||||||||||||| Sbjct: 447 gaacaagctggagccggagcggaagatgcagctcgcccgcgcgctcgggctgcagccgcg 506 Query: 408 ccaggtggccgtctggttcca 428 ||||||||| |||||||||| Sbjct: 507 tcaggtggccatctggttcca 527
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 348 gaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgcagccgcg 407 |||||||||||||||||| |||||| | |||| |||||| |||||||||||||||||| Sbjct: 3768100 gaacaagctggagccggagcggaagatgcagctcgcccgcgcgctcgggctgcagccgcg 3768041 Query: 408 ccaggtggccgtctggttcca 428 ||||||||| |||||||||| Sbjct: 3768040 tcaggtggccatctggttcca 3768020 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 391 ctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 4635407 ctcggcctgcagccgcgccaggtcgccgtctggttcca 4635444
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 89.7 bits (45), Expect = 7e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| | |||||||||||||||||| ||||| || ||||||| Sbjct: 136234 gctggagcggagcttcgagtccgggaacaagctggagccggagcggaaggcgcagctggc 136293 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| ||| |||||||||||||| ||||||||| |||||||||| Sbjct: 136294 gcgcgcgctggggctgcagccgcggcaggtggccatctggttcca 136338
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 89.7 bits (45), Expect = 7e-15 Identities = 90/105 (85%) Strand = Plus / Minus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| | |||||||||||||||||| ||||| || ||||||| Sbjct: 40308 gctggagcggagcttcgagtccgggaacaagctggagccggagcggaaggcgcagctggc 40249 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| ||| |||||||||||||| ||||||||| |||||||||| Sbjct: 40248 gcgcgcgctggggctgcagccgcggcaggtggccatctggttcca 40204
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Plus Query: 348 gaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgcagccgcg 407 |||||||||||||||||| |||||| | |||| |||||| |||||||||||||||||| Sbjct: 13277 gaacaagctggagccggagcggaagatgcagctcgcccgcgcgctcgggctgcagccgcg 13336 Query: 408 ccaggtggccgtctggttcca 428 ||||||||| |||||||||| Sbjct: 13337 tcaggtggccatctggttcca 13357
>gb|DQ353856.1| Triticum aestivum homeodomain-leucine zipper transcription factor TaHDZipI-2 mRNA, complete cds Length = 1126 Score = 89.7 bits (45), Expect = 7e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 |||||||| || |||||||| || ||||||||||||||||| | |||| | ||||||| Sbjct: 398 gctggagaagaacttcgaggtggccaacaagctggagccggagcgcaagatgcagctggc 457 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||| ||| |||||||||||||| ||||||||| |||||||||| Sbjct: 458 ccgcgcgctggggctgcagccgcggcaggtggccatctggttcca 502
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 348 gaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgcagccgcg 407 |||||||||||||||||| |||||| | |||| |||||| |||||||||||||||||| Sbjct: 46724 gaacaagctggagccggagcggaagatgcagctcgcccgcgcgctcgggctgcagccgcg 46665 Query: 408 ccaggtggccgtctggttcca 428 ||||||||| |||||||||| Sbjct: 46664 tcaggtggccatctggttcca 46644
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 89.7 bits (45), Expect = 7e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| | |||||||||||||||||| ||||| || ||||||| Sbjct: 13289985 gctggagcggagcttcgagtccgggaacaagctggagccggagcggaaggcgcagctggc 13290044 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| ||| |||||||||||||| ||||||||| |||||||||| Sbjct: 13290045 gcgcgcgctggggctgcagccgcggcaggtggccatctggttcca 13290089 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccgga 365 ||||||| |||||||||||| ||| ||||||||||| ||||| Sbjct: 11526528 gctggagcggagcttcgaggcggacaacaagctggacccgga 11526569 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 13005877 cggcgccggcgccgccggca 13005896
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 348 gaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgcagccgcg 407 |||||||||||||||||| |||||| | |||| |||||| |||||||||||||||||| Sbjct: 3768211 gaacaagctggagccggagcggaagatgcagctcgcccgcgcgctcgggctgcagccgcg 3768152 Query: 408 ccaggtggccgtctggttcca 428 ||||||||| |||||||||| Sbjct: 3768151 tcaggtggccatctggttcca 3768131 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 391 ctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 4635522 ctcggcctgcagccgcgccaggtcgccgtctggttcca 4635559
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 89.7 bits (45), Expect = 7e-15 Identities = 90/105 (85%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||| ||||||||||| | |||||||||||||||||| ||||| || ||||||| Sbjct: 13297325 gctggagcggagcttcgagtccgggaacaagctggagccggagcggaaggcgcagctggc 13297384 Query: 384 ccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| ||| |||||||||||||| ||||||||| |||||||||| Sbjct: 13297385 gcgcgcgctggggctgcagccgcggcaggtggccatctggttcca 13297429 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccgga 365 ||||||| |||||||||||| ||| ||||||||||| ||||| Sbjct: 11532968 gctggagcggagcttcgaggcggacaacaagctggacccgga 11533009 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 13013217 cggcgccggcgccgccggca 13013236
>ref|XM_467056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 918 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 369 gaagacggagctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||| |||||||||| || ||||||||||||||||||||||||||||| |||||||||| Sbjct: 365 gaaggcggagctggcgcgggagctcgggctgcagccgcgccaggtggccatctggttcca 424
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 369 gaagacggagctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||| |||||||||| || ||||||||||||||||||||||||||||| |||||||||| Sbjct: 59003 gaaggcggagctggcgcgggagctcgggctgcagccgcgccaggtggccatctggttcca 59062
>dbj|AK063685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-F01, full insert sequence Length = 918 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 369 gaagacggagctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||| |||||||||| || ||||||||||||||||||||||||||||| |||||||||| Sbjct: 365 gaaggcggagctggcgcgggagctcgggctgcagccgcgccaggtggccatctggttcca 424
>gb|BT014213.1| Lycopersicon esculentum clone 133390F, mRNA sequence Length = 1472 Score = 75.8 bits (38), Expect = 1e-10 Identities = 137/170 (80%) Strand = Plus / Plus Query: 259 gaggagtactacgacgagcagctcccggagaagaagcgacgcctcaccccggagcaggtc 318 ||||| ||||||||||||||| |||||||||||||| || ||||| || |||||||| Sbjct: 625 gaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtg 684 Query: 319 cacctgctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggag 378 ||| || |||||| |||||| ||| || |||||||||||||| || | || || || Sbjct: 685 cacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccag 744 Query: 379 ctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||||| ||||| ||||||||||| | |||||||| || |||||||| Sbjct: 745 ctggcctaaaagctggggctgcagcccagacaggtggctgtatggttcca 794
>gb|AF443621.1| Craterostigma plantagineum homeodomain leucine zipper protein CPHB-5 (CPHB-5) mRNA, complete cds Length = 1401 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 286 gagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagcttcgaggag 345 ||||||||||| || |||||| | |||||||| ||| |||| |||| ||||||||||| Sbjct: 574 gagaagaagcgccgactcaccgccgagcaggttcacttgcttgagaagagcttcgaggct 633 Query: 346 gagaacaagctggagcc 362 ||||||||||| ||||| Sbjct: 634 gagaacaagcttgagcc 650
>ref|XM_473365.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 690 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 369 gaagacggagctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||| |||||||||| ||| |||| || ||||||||||| ||||||||| |||||||||| Sbjct: 159 gaaggcggagctggcgcgcgagctgggcctgcagccgcggcaggtggccatctggttcca 218
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 369 gaagacggagctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||| |||||||||| ||| |||| || ||||||||||| ||||||||| |||||||||| Sbjct: 40542 gaaggcggagctggcgcgcgagctgggcctgcagccgcggcaggtggccatctggttcca 40601
>gb|AF402606.1|AF402606 Phaseolus vulgaris homeodomain leucine zipper protein HDZ3 mRNA, partial cds Length = 966 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 283 ccggagaagaagcgacgcctcaccccggagcaggtccacctgctggagaggagcttcgag 342 ||||||||||||| ||||||| | || |||||||| ||| |||||| |||||| ||| Sbjct: 10 ccggagaagaagcatcgcctcagttctgaacaggtccatctgttggagaagagctttgag 69 Query: 343 gaggagaacaagctggagccggaaaggaagac 374 || |||||||| |||||||| || |||||||| Sbjct: 70 gaagagaacaaactggagcctgagaggaagac 101
>gb|AY224440.1| Oryza sativa (japonica cultivar-group) isolate 22834 homeodomain leucine zipper protein-like protein mRNA, partial cds Length = 837 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 369 gaagacggagctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||| |||||||||| ||| |||| || ||||||||||| ||||||||| |||||||||| Sbjct: 306 gaaggcggagctggcgcgcgagctgggcctgcagccgcggcaggtggccatctggttcca 365
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 369 gaagacggagctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||| |||||||||| ||| |||| || ||||||||||| ||||||||| |||||||||| Sbjct: 27097899 gaaggcggagctggcgcgcgagctgggcctgcagccgcggcaggtggccatctggttcca 27097958 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 124 cagatgctcttcatggactgcggcgcc 150 ||||||||||||||||||| ||||||| Sbjct: 30192692 cagatgctcttcatggactccggcgcc 30192666 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atgctcttcatggactgcggcgcc 150 |||||||||||||||| ||||||| Sbjct: 30199057 atgctcttcatggactccggcgcc 30199034
>dbj|AK109177.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-H12, full insert sequence Length = 908 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 369 gaagacggagctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||| |||||||||| ||| |||| || ||||||||||| ||||||||| |||||||||| Sbjct: 69 gaaggcggagctggcgcgcgagctgggcctgcagccgcggcaggtggccatctggttcca 128
>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_B06 Length = 106678 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 378 gctggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 |||||| ||| | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 20 gctggcgcgcgacctcggcctgcagccgcgccaggtcgccgtctggttcca 70
>ref|NM_187673.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 924 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 391 ctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 226 ctcggcctgcagccgcgccaggtcgccgtctggttcca 263
>gb|AY554032.1| Oryza sativa (japonica cultivar-group) clone R10191 Hox13 (hox13) mRNA, partial cds Length = 419 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 391 ctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 154 ctcggcctgcagccgcgccaggtcgccgtctggttcca 191
>dbj|AK105644.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F05, full insert sequence Length = 1573 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 391 ctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 605 ctcggcctgcagccgcgccaggtcgccgtctggttcca 642
>dbj|AK101601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051J21, full insert sequence Length = 1534 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 391 ctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 606 ctcggcctgcagccgcgccaggtcgccgtctggttcca 643
>dbj|AK101522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046N04, full insert sequence Length = 1577 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 391 ctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 602 ctcggcctgcagccgcgccaggtcgccgtctggttcca 639
>dbj|AK060119.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F01, full insert sequence Length = 1214 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 391 ctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 284 ctcggcctgcagccgcgccaggtcgccgtctggttcca 321
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 391 ctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 76362 ctcggcctgcagccgcgccaggtcgccgtctggttcca 76399
>ref|NM_196163.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine zipper protein (OSJNBa0095C06.14), mRNA Length = 888 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccgga 365 ||||||| |||||||||||| ||| ||||||||||| ||||| Sbjct: 198 gctggagcggagcttcgaggcggacaacaagctggacccgga 239
>gb|AY346329.1| Oryza sativa (indica cultivar-group) homeodomain leucine-zipper protein Hox8 mRNA, complete cds Length = 1272 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccgga 365 ||||||| |||||||||||| ||| ||||||||||| ||||| Sbjct: 390 gctggagcggagcttcgaggcggacaacaagctggacccgga 431
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccgga 365 ||||||| |||||||||||| ||| ||||||||||| ||||| Sbjct: 110521 gctggagcggagcttcgaggcggacaacaagctggacccgga 110562
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 52.0 bits (26), Expect = 0.002 Identities = 88/108 (81%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 324 gctggagaggagcttcgaggaggagaa---caagctggagccggaaaggaagacggagct 380 ||||||| ||||||||||||||||||| |||||||||||||| |||||| ||||| Sbjct: 36828 gctggagcggagcttcgaggaggagaagcggaagctggagccggagcggaagagcgagct 36769 Query: 381 ggcccgcaagctcgggctgcagccgcgccaggtggccgtctggttcca 428 ||| || |||||| | |||||| ||||||||||| |||||||| Sbjct: 36768 ggcgcggcgtctcgggatcgcgccgcggcaggtggccgtgtggttcca 36721
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 348 gaacaagctggagccggaaaggaagacggagctggcccgcaagctcgggctgcagccgcg 407 |||||||||||||||||| ||||| | ||||||| || || || ||||||||||| Sbjct: 20013 gaacaagctggagccggagcggaagctgcagctggcgcgtgcccttggcctgcagccgcg 20072 Query: 408 ccaggtggccgtctggttcca 428 ||||||||| |||||||||| Sbjct: 20073 gcaggtggccatctggttcca 20093
>ref|XM_550827.1| Anopheles gambiae str. PEST ENSANGP00000027105 (ENSANGG00000023474), partial mRNA Length = 498 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 376 gagctggcccgcaagctcgggctgcagc 403 |||||||||||| ||||||||||||||| Sbjct: 130 gagctggcccgccagctcgggctgcagc 157
>ref|XM_462681.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1728 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 124 cagatgctcttcatggactgcggcgcc 150 ||||||||||||||||||| ||||||| Sbjct: 1496 cagatgctcttcatggactccggcgcc 1470
>ref|XM_473736.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1728 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 124 cagatgctcttcatggactgcggcgcc 150 ||||||||||||||||||| ||||||| Sbjct: 1496 cagatgctcttcatggactccggcgcc 1470
>dbj|AK105711.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E10, full insert sequence Length = 1914 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 124 cagatgctcttcatggactgcggcgcc 150 ||||||||||||||||||| ||||||| Sbjct: 309 cagatgctcttcatggactccggcgcc 335
>dbj|AK070216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045E19, full insert sequence Length = 2944 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 124 cagatgctcttcatggactgcggcgcc 150 ||||||||||||||||||| ||||||| Sbjct: 2420 cagatgctcttcatggactccggcgcc 2394
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Minus Query: 124 cagatgctcttcatggactgcggcgcc 150 ||||||||||||||||||| ||||||| Sbjct: 88983 cagatgctcttcatggactccggcgcc 88957 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atgctcttcatggactgcggcgcc 150 |||||||||||||||| ||||||| Sbjct: 95348 atgctcttcatggactccggcgcc 95325
>dbj|D26573.1|DARKUROA Carrot mRNA for DNA-binding protein (transcriptional regulator), complete cds, CHB1 Length = 1599 Score = 46.1 bits (23), Expect = 0.093 Identities = 41/47 (87%) Strand = Plus / Plus Query: 325 ctggagaggagcttcgaggaggagaacaagctggagccggaaaggaa 371 ||||||| |||||| |||| |||||||||||| ||||| || ||||| Sbjct: 630 ctggagaagagctttgaggtggagaacaagcttgagcctgacaggaa 676
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 cggcgccggcgccgccggcatg 165 |||||||||||||||||||||| Sbjct: 10413 cggcgccggcgccgccggcatg 10392
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 cggcgccggcgccgccggcatg 165 |||||||||||||||||||||| Sbjct: 267193 cggcgccggcgccgccggcatg 267172 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 tgcggcgccggcgccgccggca 163 |||||||||||||||||||||| Sbjct: 124287 tgcggcgccggcgccgccggca 124308
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 cggcgccggcgccgccggcatg 165 |||||||||||||||||||||| Sbjct: 135531 cggcgccggcgccgccggcatg 135510
>ref|XM_626740.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd3_1680), partial mRNA Length = 630 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 50 aacttcttgaagcttttttccc 71 |||||||||||||||||||||| Sbjct: 394 aacttcttgaagcttttttccc 373
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggcatg 165 |||||||||||||||||||||| Sbjct: 2267138 cggcgccggcgccgccggcatg 2267159
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggcat 164 ||||||||||||||||||||| Sbjct: 1135385 cggcgccggcgccgccggcat 1135405
>ref|NM_189474.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1587 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggca 163 ||||||||||||||||||||| Sbjct: 223 gcggcgccggcgccgccggca 203
>gb|BC060695.1| Mus musculus jumonji, AT rich interactive domain 2, mRNA (cDNA clone MGC:66908 IMAGE:6406875), complete cds Length = 4939 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 3048 gaggaggagaacaagctggag 3068
>gb|BC052444.1| Mus musculus jumonji, AT rich interactive domain 2, mRNA (cDNA clone MGC:63443 IMAGE:6406875), complete cds Length = 4939 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 3048 gaggaggagaacaagctggag 3068
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcgccggcgccgccggcatg 165 ||||||||||||||||||||| Sbjct: 1603117 ggcgccggcgccgccggcatg 1603097 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcgccggcgccgccggcat 164 |||||||||||||||||||| Sbjct: 2986697 ggcgccggcgccgccggcat 2986716
>gb|BC050129.1| Mus musculus jumonji, AT rich interactive domain 2, mRNA (cDNA clone IMAGE:30024329), partial cds Length = 5041 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 3379 gaggaggagaacaagctggag 3399
>gb|BC051010.1| Mus musculus jumonji, AT rich interactive domain 2, mRNA (cDNA clone IMAGE:6467926), with apparent retained intron Length = 8373 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 5819 gaggaggagaacaagctggag 5839
>gb|BC026056.1| Mus musculus jumonji, AT rich interactive domain 2, mRNA (cDNA clone IMAGE:4189039), containing frame-shift errors Length = 4576 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 3365 gaggaggagaacaagctggag 3385
>gb|BC003374.1| Mus musculus jumonji, AT rich interactive domain 2, mRNA (cDNA clone IMAGE:3589616), partial cds Length = 2238 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 1027 gaggaggagaacaagctggag 1047
>gb|BC115758.1| Mus musculus RIKEN cDNA D230044M03 gene, mRNA (cDNA clone IMAGE:40056280), partial cds Length = 2742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 2062 gaggaggagaacaagctggag 2082
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggcat 164 ||||||||||||||||||||| Sbjct: 184459 cggcgccggcgccgccggcat 184479
>gb|AC159210.2| Mus musculus BAC clone RP23-54F9 from chromosome 13, complete sequence Length = 228429 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 203295 gaggaggagaacaagctggag 203275
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cccgcaagctcgggctgcagc 403 ||||||||||||||||||||| Sbjct: 151450 cccgcaagctcgggctgcagc 151470
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggcat 164 ||||||||||||||||||||| Sbjct: 477591 cggcgccggcgccgccggcat 477611 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 caacacgtcgggctccggca 118 |||||||||||||||||||| Sbjct: 2477893 caacacgtcgggctccggca 2477874
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 ccgcgccaggtggccgtctgg 423 ||||||||||||||||||||| Sbjct: 161236 ccgcgccaggtggccgtctgg 161216
>ref|NM_021878.2| Mus musculus jumonji, AT rich interactive domain 2 (Jarid2), mRNA Length = 4939 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 3048 gaggaggagaacaagctggag 3068
>dbj|AK147226.1| Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M421020G19 product:jumonji, AT rich interactive domain 2, full insert sequence Length = 5991 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 3458 gaggaggagaacaagctggag 3478
>dbj|AK164134.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530046H17 product:jumonji, AT rich interactive domain 2, full insert sequence Length = 3128 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 2782 gaggaggagaacaagctggag 2802
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 tgcggcgccggcgccgccggc 162 ||||||||||||||||||||| Sbjct: 118524 tgcggcgccggcgccgccggc 118544
>dbj|AK045214.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130048B16 product:JUMONJI PROTEIN, full insert sequence Length = 4456 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 3263 gaggaggagaacaagctggag 3283
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggcat 164 ||||||||||||||||||||| Sbjct: 27820366 cggcgccggcgccgccggcat 27820386
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggcat 164 ||||||||||||||||||||| Sbjct: 169621 cggcgccggcgccgccggcat 169641
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggcat 164 ||||||||||||||||||||| Sbjct: 122875 cggcgccggcgccgccggcat 122895
>ref|NM_211417.1| Eremothecium gossypii AGL312Wp (AGL312W), mRNA Length = 1752 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 tgcggcgccggcgccgccggc 162 ||||||||||||||||||||| Sbjct: 960 tgcggcgccggcgccgccggc 980
>gb|AY104494.1| Zea mays PCO133236 mRNA sequence Length = 1077 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 cggcgccggcgccgccggcat 164 ||||||||||||||||||||| Sbjct: 233 cggcgccggcgccgccggcat 213
>dbj|D31967.1|MUSTGPO Mus musculus mRNA for jumonji protein, complete cds Length = 4071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 3067 gaggaggagaacaagctggag 3087
>gb|AC166074.3| Mus musculus BAC clone RP23-152H18 from chromosome 13, complete sequence Length = 224712 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctggag 360 ||||||||||||||||||||| Sbjct: 190481 gaggaggagaacaagctggag 190501
>dbj|AB028077.1| Physcomitrella patens mRNA for homeobox protein PpHB6, complete cds Length = 1802 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 324 gctggagaggagcttcgaggaggagaacaagctggagccggaaaggaagacggagctggc 383 ||||||||||| |||||| |||||||||||| ||||| ||| |||| | | ||||||| Sbjct: 569 gctggagaggaatttcgagatggagaacaagctcgagcctgaacggaaaatgcagctggc 628 Query: 384 c 384 | Sbjct: 629 c 629
>ref|NM_188071.1| Oryza sativa (japonica cultivar-group), Ozsa8491 predicted mRNA Length = 660 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 605 gcggcgccggcgccgccggc 586
>ref|XM_480990.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1025 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 540 gcggcgccggcgccgccggc 521
>ref|XM_464849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 351 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 234 cggcgccggcgccgccggca 215
>ref|XM_462682.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1782 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atgctcttcatggactgcggcgcc 150 |||||||||||||||| ||||||| Sbjct: 1547 atgctcttcatggactccggcgcc 1524
>ref|XM_518250.1| PREDICTED: Pan troglodytes similar to jumonji, AT rich interactive domain 2 protein; jumonji homolog (mouse); jumonji (mouse) homolog (LOC462450), mRNA Length = 5391 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctgga 359 |||||||||||||||||||| Sbjct: 4795 gaggaggagaacaagctgga 4814
>ref|NM_196379.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0050N08.20), mRNA Length = 357 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 258 cggcgccggcgccgccggca 277
>ref|NM_193096.1| Oryza sativa (japonica cultivar-group), mRNA Length = 648 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 23 gcggcgccggcgccgccggc 42
>ref|XM_478887.1| Oryza sativa (japonica cultivar-group), mRNA Length = 723 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 caggtggccgtctggttcca 428 |||||||||||||||||||| Sbjct: 304 caggtggccgtctggttcca 323
>ref|XM_473737.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1782 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atgctcttcatggactgcggcgcc 150 |||||||||||||||| ||||||| Sbjct: 1547 atgctcttcatggactccggcgcc 1524
>ref|NM_004973.2| Homo sapiens Jumonji, AT rich interactive domain 2 (JARID2), mRNA Length = 5756 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctgga 359 |||||||||||||||||||| Sbjct: 3107 gaggaggagaacaagctgga 3126
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 104793 cggcgccggcgccgccggca 104812
>ref|XM_616463.2| PREDICTED: Bos taurus similar to suppression of tumorigenicity 18 (LOC536336), partial mRNA Length = 3167 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 tcgaggaggagaacaagctg 357 |||||||||||||||||||| Sbjct: 2914 tcgaggaggagaacaagctg 2933
>gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0027N19, complete sequence Length = 141368 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 33142 cggcgccggcgccgccggca 33161
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 134559 cggcgccggcgccgccggca 134578
>gb|AY559047.1| Oryza sativa (japonica cultivar-group) homeodomain leucine zipper protein 14 (hox14) mRNA, complete cds Length = 1173 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 caggtggccgtctggttcca 428 |||||||||||||||||||| Sbjct: 509 caggtggccgtctggttcca 528
>gb|BC046184.1| Homo sapiens Jumonji, AT rich interactive domain 2, mRNA (cDNA clone IMAGE:5393382), partial cds Length = 1947 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctgga 359 |||||||||||||||||||| Sbjct: 233 gaggaggagaacaagctgga 252
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 gctggcccgcaagctcgggctgca 401 ||||||||||| |||||||||||| Sbjct: 16464 gctggcccgcacgctcgggctgca 16441
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ctgcggcgccggcgccgccg 160 |||||||||||||||||||| Sbjct: 467194 ctgcggcgccggcgccgccg 467213
>emb|AL021938.1|HS232K4 Human DNA sequence from clone RP1-232K4 on chromosome 6p22.3 Contains the 3'end of the JMJ gene for jumonji protein and 2 CpG islands, complete sequence Length = 198161 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 gaggaggagaacaagctgga 359 |||||||||||||||||||| Sbjct: 11210 gaggaggagaacaagctgga 11191
>gb|AY305030.1| Oryza sativa (japonica cultivar-group) nitrate transporter NRT1;2 mRNA, complete cds Length = 1784 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atgctcttcatggactgcggcgcc 150 |||||||||||||||| ||||||| Sbjct: 1549 atgctcttcatggactccggcgcc 1526
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cggagctggcccgcaagctc 393 |||||||||||||||||||| Sbjct: 229358 cggagctggcccgcaagctc 229377
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 5109 gcggcgccggcgccgccggc 5128
>gb|BC046246.1| Homo sapiens Jumonji, AT rich interactive domain 2, mRNA (cDNA clone MGC:47594 IMAGE:4520786), complete cds Length = 4864 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctgga 359 |||||||||||||||||||| Sbjct: 3145 gaggaggagaacaagctgga 3164
>dbj|AK126552.1| Homo sapiens cDNA FLJ44588 fis, clone ASTRO3000154, highly similar to Jumonji protein Length = 4792 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctgga 359 |||||||||||||||||||| Sbjct: 551 gaggaggagaacaagctgga 570
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 gcagccgcgccaggtggccg 418 |||||||||||||||||||| Sbjct: 1656760 gcagccgcgccaggtggccg 1656779
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cttttttccctgcgatggag 81 |||||||||||||||||||| Sbjct: 1204226 cttttttccctgcgatggag 1204245
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 cgacctgctggaggaggagtacta 269 ||||||||||||||| |||||||| Sbjct: 299013 cgacctgctggaggacgagtacta 299036
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 3633623 cggcgccggcgccgccggca 3633604
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 24654712 gcggcgccggcgccgccggc 24654693
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 26167522 gcggcgccggcgccgccggc 26167503 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 caggtggccgtctggttcca 428 |||||||||||||||||||| Sbjct: 23506568 caggtggccgtctggttcca 23506587
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 3712212 cggcgccggcgccgccggca 3712231
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 9428986 gcggcgccggcgccgccggc 9429005
>emb|BX823491.1|CNS0A6ME Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS43ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1263 Score = 40.1 bits (20), Expect = 5.7 Identities = 80/100 (80%) Strand = Plus / Plus Query: 268 tacgacgagcagctcccggagaagaagcgacgcctcaccccggagcaggtccacctgctg 327 |||||||| ||| | || || |||||||| |||||||| | || || || || |||||| Sbjct: 536 tacgacgaccagttgcctgaaaagaagcgtcgcctcactaccgaacaagtgcatctgctg 595 Query: 328 gagaggagcttcgaggaggagaacaagctggagccggaaa 367 |||| ||||||||| ||||||||||| ||||| |||| Sbjct: 596 gagaaaagcttcgagacagagaacaagctagagcctgaaa 635
>gb|AC018890.13| Homo sapiens BAC clone RP11-493G24 from 2, complete sequence Length = 173965 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 377 agctggcccgcaagctcgggctgcagcc 404 ||||||||||||||| |||| ||||||| Sbjct: 10111 agctggcccgcaagcgcggggtgcagcc 10138
>ref|XM_217309.3| PREDICTED: Rattus norvegicus similar to dipeptidylpeptidase 9 (LOC301130), mRNA Length = 2727 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 aggagaacaagctggagccg 363 |||||||||||||||||||| Sbjct: 1277 aggagaacaagctggagccg 1258
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 ggagctggcccgcaagctcgggct 398 |||||||||| ||||||||||||| Sbjct: 2367027 ggagctggccggcaagctcgggct 2367050 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 gcccttcttcacctcgccgg 244 |||||||||||||||||||| Sbjct: 2145867 gcccttcttcacctcgccgg 2145848
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0693B08 Length = 140812 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 99313 gcggcgccggcgccgccggc 99332
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 103360 gcggcgccggcgccgccggc 103341
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 7812 cggcgccggcgccgccggca 7831
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ggagctggcccgcaagctcg 394 |||||||||||||||||||| Sbjct: 4467327 ggagctggcccgcaagctcg 4467308 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ggcgcggcgtgaagcggccc 228 |||||||||||||||||||| Sbjct: 84830 ggcgcggcgtgaagcggccc 84849
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 caggtggccgtctggttcca 428 |||||||||||||||||||| Sbjct: 66961 caggtggccgtctggttcca 66980
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 caggtggccgtctggttcca 428 |||||||||||||||||||| Sbjct: 126465 caggtggccgtctggttcca 126484
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1113_G05 Length = 131445 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 87759 cggcgccggcgccgccggca 87778
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 28544 gcggcgccggcgccgccggc 28525
>dbj|AK121889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105B17, full insert sequence Length = 1130 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 caggtggccgtctggttcca 428 |||||||||||||||||||| Sbjct: 502 caggtggccgtctggttcca 521
>dbj|AK109938.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-A03, full insert sequence Length = 1025 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 540 gcggcgccggcgccgccggc 521
>dbj|AK107797.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-D11, full insert sequence Length = 697 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cggcgccggcgccgccggca 163 |||||||||||||||||||| Sbjct: 208 cggcgccggcgccgccggca 227
>dbj|AK101602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051K11, full insert sequence Length = 1510 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 757 gcggcgccggcgccgccggc 776
>dbj|AK101480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041C01, full insert sequence Length = 2178 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atgctcttcatggactgcggcgcc 150 |||||||||||||||| ||||||| Sbjct: 1777 atgctcttcatggactccggcgcc 1754
>ref|NM_208720.1| Eremothecium gossypii ACL037Wp (ACL037W), mRNA Length = 864 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 cgacctgctggaggaggagtacta 269 ||||||||||||||| |||||||| Sbjct: 627 cgacctgctggaggacgagtacta 650
>dbj|AK064396.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G07, full insert sequence Length = 1523 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 768 gcggcgccggcgccgccggc 787
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 59380 gcggcgccggcgccgccggc 59361
>gb|U57592.1|HSU57592 Human jumonji putative protein (jumonji) mRNA, complete cds Length = 4068 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 gaggaggagaacaagctgga 359 |||||||||||||||||||| Sbjct: 3107 gaggaggagaacaagctgga 3126
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 24582918 gcggcgccggcgccgccggc 24582899
>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143895 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 gcggcgccggcgccgccggc 162 |||||||||||||||||||| Sbjct: 99578 gcggcgccggcgccgccggc 99559
>dbj|AP006364.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT28B04, TM0170, complete sequence Length = 101172 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 325 ctggagaggagcttcgaggaggagaacaagct 356 ||||||| ||||||||||| ||| |||||||| Sbjct: 44673 ctggagaagagcttcgaggtggataacaagct 44642 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,530,606 Number of Sequences: 3902068 Number of extensions: 3530606 Number of successful extensions: 96004 Number of sequences better than 10.0: 166 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 91868 Number of HSP's gapped (non-prelim): 4127 length of query: 428 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 406 effective length of database: 17,147,199,772 effective search space: 6961763107432 effective search space used: 6961763107432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
